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Oryza sativa
cluster # 9517 cluster # 9517       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9517#0 length = 1650 sequences # 2  
consensus_9517#1 length = 1540 sequences # 4  

consensusID : consensus_9517#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1650
fasta sequence
                              [ACCTGGGCGAGTTGTCCGTTGGCGCCGCCGCCGGCGAGCTCGCGCACGGCCGCCGCGGCAGTACGGGATGGCGGAGGCGGGAGTGGCGGCCGCCTCGCTCTTCGGCGCCGACCGCCGCCTCTGCTCCGCCGACATCCTCCCTCCCGCCGAGGTGCGGGCGAGGATCGAGGTGGCGGTGCTCAACTTCCTCGCGGCGCTCACCGACCCGGCCGCACCGGCCATCTCCGCCCTCCCGCTGATCAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTCGGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGCATTCGTTAGAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCTGGTCACCCTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTGCCAGCGGCATGTCAACCAGACTGTTCAAGATGTCTTCTCGTTGCTCCGGTGTACGAGGCAGAGCCTGGGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGGTGCAGGGGCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGGAGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGTGGAGAAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCGTGTATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACTGAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCTTGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATATGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAGCGCATATCAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAAGTTTCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGCCGAGATCGAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAAGATTGTACAGGGTGATTACATTTGACAGTGCATTGCTGCCTGCCTCATGGTTTCTCTGGTTTTACTGAGAACTGAAATTTTGAGCTGATTCCATCAGCCCTGGCCCTGTCCAGTTTTCTTCAAAAATGACTTGTATCTTTGAAGAATGTTGCTGTTGTTACTGCACGTCCCCTGCGTGAGTATGCTGTATGCAGAATACTTGAAATTATTACACCATCTGAAGGTGAAGGAGAAATCTGAACCTTGACATACACAAAAGGATACTGCTATACATCCCCAGAATGTCAGTAGTAAACTGCTCAGCTGTGGACTACTGGATGTAAATTGTAGTCTAGCAGTTGCATATATCTCCTCCTTTTTACCTCCTTTATTAAACAAAGATCAAACGGTCTTTAGTGTGTTAACACATGGAATATTGTCGGATTTACTGCAGTTCTAAGGTGCTGTTTG]

[+] EMBL AK073344             [ACCTGGGCGAGTTGTCCGTTGGCGCCGCCGCCGGCGAGCTCGCGCACGGCCGCCGCGGCAGTACGGGATGGCGGAGGCGGGAGTGGCGGCCGCCTCGCTCTTCGGCGCCGACCGCCGCCTCTGCTCCGCCGACATCCTCCCTCCCGCCGAGGTGCGGGCGAGGATCGAGGTGGCGGTGCTCAACTTCCTCGCGGCGCTCACCGACCCGGCCGCACCGGCCATCTCCGCCCTCCCGCTGATCAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTCGGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGCATTCGTTAGAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCTGGTCACCCTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTGCCAGCGGCATGTCAACCAGACTGTTCAAGATGTCTTCTCGTTGCTCCGGTGTACGAGGCAGAGCCTGGGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGGTGCAGGGGCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGGAGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGTGGAGAAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCGTGTATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACTGAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCTTGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATATGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAGCGCATATCAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAAGTTTCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGCCGAGATCGAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAAGATTGTACAGGGTGATTACATTTGACAGTGCATTGCTGCCTGCCTCATGGTTTCTCTGGTTTTACTGAGAACTGAAATTTTGAGCTGATTCCATCAGCCCTGGCCCTGTCCAGTTTTCTTCAAAAATGACTTGTATCTTTGAAGAATGTTGCTGTTGTTACTGCACGTCCCCTGCGTGAGTATGCTGTATGCAGAATACTTGAAATTATTACACCATCTGAAGGTGAAGGAGAAATCTGAACCTTGACATACACAAAAGGATACTGCTATACATCCCCAGAATGTCAGTAGTAAACTGCTCAGCTGTGGACTACTGGATGTAAATTGTAGTCTAGCAGTTGCATATATCTCCTCCTTTTTACCTCCTTTATTAAACAAAGATCAAACGGTCTTTAGTGTGTTAACACATGGAATATTGTCGGATTTACTGCAGTTCTAAGGTGCTGTTTG]
[+] EMBL AU085711             [                                                                                                      CGGCGCCGACCGCCGCCTCTGCTCCGCCGACATCCTCCCTCCCGCCGAGGTGCGGGCGAGGATCGAGGTGGCGGTGCTCAACTTCCTCGCGGCGCTCACCGACCCGGCCGCACCGGCCATCTCCGCCCTCCCGCTGATCAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCG GACGACGTCTCGTCGGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGCATTCGTTAGANTGTGGAAGGTGATGGAGATGTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_9517#0 ACCTGGGCGAGTTGTCCGTTGGCGCCGCCGCCGGCGAGCTCGCGCACGGCCGCCGCGGCA GTACGGGATGGCGGAGGCGGGAGTGGCGGCCGCCTCGCTCTTCGGCGCCGACCGCCGCCT CTGCTCCGCCGACATCCTCCCTCCCGCCGAGGTGCGGGCGAGGATCGAGGTGGCGGTGCT CAACTTCCTCGCGGCGCTCACCGACCCGGCCGCACCGGCCATCTCCGCCCTCCCGCTGAT CAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTC GGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGC ATTCGTTAGAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCT GGTCACCCTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTG CCAGCGGCATGTCAACCAGACTGTTCAAGATGTCTTCTCGTTGCTCCGGTGTACGAGGCA GAGCCTGGGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGGTGCAGGG GCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGG AGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGT GGAGAAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCGTG TATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACT GAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCT TGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATA TGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAG CGCATATCAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAA GTTTCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGC CGAGATCGAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAA GATTGTACAGGGTGATTACATTTGACAGTGCATTGCTGCCTGCCTCATGGTTTCTCTGGT TTTACTGAGAACTGAAATTTTGAGCTGATTCCATCAGCCCTGGCCCTGTCCAGTTTTCTT CAAAAATGACTTGTATCTTTGAAGAATGTTGCTGTTGTTACTGCACGTCCCCTGCGTGAG TATGCTGTATGCAGAATACTTGAAATTATTACACCATCTGAAGGTGAAGGAGAAATCTGA ACCTTGACATACACAAAAGGATACTGCTATACATCCCCAGAATGTCAGTAGTAAACTGCT CAGCTGTGGACTACTGGATGTAAATTGTAGTCTAGCAGTTGCATATATCTCCTCCTTTTT ACCTCCTTTATTAAACAAAGATCAAACGGTCTTTAGTGTGTTAACACATGGAATATTGTC GGATTTACTGCAGTTCTAAGGTGCTGTTTG



consensusID : consensus_9517#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1540
fasta sequence
                              [CCGTTGGCGCCGCCGCCGGCGAGCTCGCGCACGGCCGCCGCGGCAGTACGGGATGGCGGAGGCGGGAGTGGCGGCCGCCTCGCTCTTCGGCGCCGACCGCCGCCTCTGCTCCGCCGACATCCTCCCTCCCGCACCGGCCATCTCCGCCCTCCCGCTGATCAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTCGGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGCATTCGTTAGAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCTGGTCACCCTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTGCCAGCGGCATGTCAACCAGACTGTTCAAGATGTCGTCTCGTTGCTCCGGTGTACGAGGCAGAGCCTGGGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGGTGCAGGGGCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGGAGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGTGGAGAAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCGTGTATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACTGAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCTTGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATATGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAGCGCATATCAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAAGTTTCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGCCGAGATCGAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAAGATTGTACAGGGTGATTACATTTGACAGTGCATTGCTGCCTGCCTCATGGTTTCTCTGGTTTTACTGAGAACTGAAATTTTGAGCTGATT-CCATCAGCCCTGGCCCTGTCCAGTTTTCTTCAAAAATGGCTTGTATCTTTGAAGAATGTTGCTGTTGTTAC-TGCACGTCCCCTGCGTGAGTATGCTGTATGCAGAATACTTGAAATTATTACACCATCTGAAGGTGAAGGAGAAATCTGAACCTTGACATACACAAAAGGATACTGCTATACATCCCCAGAATGTCAGTAGTAAACTGCTCAGCTGTGGACTACTGGATGTAAATTGTAGTCTAGCAGTTGCATATATCTCCTCCTTTTTACCNCCTTTATTAAACAAAGNTCAAACGGTCTTTAGTGTGTTAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK106397             [CCGTTGGCGCCGCCGCCGGCGAGCTCGCGCACGGCCGCCGCGGCAGTACGGGATGGCGGAGGCGGGAGTGGCGGCCGCCTCGCTCTTCGGCGCCGACCGCCGCCTCTGCTCCGCCGACATCCTCCCTCCCGCACCGGCCATCTCCGCCCTCCCGCTGATCAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTCGGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGCATTCGTTAGAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCTGGTCACCCTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTGCCAGCGGCATGTCAACCAGACTGTTCAAGATGTCGTCTCGTTGCTCCGGTGTACGAGGCAGAGCCTGGGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGGTGCAGGGGCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGGAGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGTGGAGAAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCGTGTATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACTGAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCTTGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATATGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAGCGCATATCAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAAGTTTCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGCCGAGATCGAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAAGATTGTACAGGGTGATTACATTTGACAGTGCATTGCTGCCTGCCTCATGGTTTCTCTGGTTTTACTGAGAACTGAAATTTTGAGCTGATT CCATCAGCCCTGGCCCTGTCCAGTTTTCTTCAAAAATGGCTTGTATCTTTGAAGAATGTTGCTGTTGTTAC TGCACGTCCCCTGCGTGAGTATGCTGTATGCAGAATACTTGAAATTATTACACCATCTGAAGGTGAAGGAGAAATCTGAACCT                                                                                                                                                                                 ]
[+] EMBL CA756192             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TAGAGGGGCACTGATTGGGCGGCTTGTGGTGCAGGGGCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGGAGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGTGGAGAAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCGTGTATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACTGAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCTTGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATATGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAGCGCATATCANGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAAGTTTCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGCCGAGATCGAAGCTCTCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C97071               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAAAACTGAAATTTTGA CCGATTCCCATCAGCCCTGGCCCTGTCCAGTTTCCTCAAAAAATGACTTGTANCTTTGAAGAATGTTGCTGTTGTTAC TGCACGTCCCCTGCGTGAGTATGCTGTATGCAGAATACNTGAAATTATTACACCATCTGAAGGTGAAGGAGAAATCTGAACCTTGACATACACAAAAGGATACTGCTATACATCCCCAGAATGTCAGTAGTAAACTGCTCAGCTGTGGACTACTGGATGTAAATTGTAGTCTAGCAGTTGCATATATCTCCTCCTTTTTACCNCCTTTATTAAACAAAGNTCAAACGGTCTTTAGTGTGTTAAAAAAAAAAAAAAAAAAA]
[+] EMBL C97064               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGCTGTTACTTGCACGNCCCCTGCGTGAGTATGCTGTATGCAGAATACTTGAAANTATTACACCATCTGAAGGTGAAGGAGAAATCTGAACCTTGACATACACAAAAGGATACTGCTATACATCCCCAGAATGTCAGTAGTAAACTGCTCAGCTGTGGACTACTGGATGTAAATTGTAGTCTAGCANTTGCATATATCTCCTCCTTTTTACCTCCTTTATTAAACAAAGATCAAACGGTCTTTAGTGTGTTAAAAAAAAAAAAAAAAAAA]


>consensus_9517#1 CCGTTGGCGCCGCCGCCGGCGAGCTCGCGCACGGCCGCCGCGGCAGTACGGGATGGCGGA GGCGGGAGTGGCGGCCGCCTCGCTCTTCGGCGCCGACCGCCGCCTCTGCTCCGCCGACAT CCTCCCTCCCGCACCGGCCATCTCCGCCCTCCCGCTGATCAGCCGGGGCGCCGCCAACCG CGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTCGGTGTACCTCTCCTACGCCTC CTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGCATTCGTTAGAGTGTGGAAGGT GATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCTGGTCACCCTGAGGGAGCTGTT CTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTGCCAGCGGCATGTCAACCAGAC TGTTCAAGATGTCGTCTCGTTGCTCCGGTGTACGAGGCAGAGCCTGGGGATCATGGCGTC GAGTAGAGGGGCACTGATTGGGCGGCTTGTGGTGCAGGGGCCGGAGGAAGAACATGTTGA CTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGGAGATCTCAATGTATTGAGCAA ATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGTGGAGAAGGATGCCATATTTCA GAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCGTGTATCCTGATTACTGCAAAAGG ATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACTGAGCCAGACTTATCCGAACAT GCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCTTGCTATACTATGCACTTACAA GTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATATGCTTGCAATGTAAAATGGCT TGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAGCGCATATCAAGAACTGAAGCC ACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAAGTTTCTGCAGGACAAGCACAG AGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGCCGAGATCGAAGCTCTCTACTC ACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAAGATTGTACAGGGTGATTACAT TTGACAGTGCATTGCTGCCTGCCTCATGGTTTCTCTGGTTTTACTGAGAACTGAAATTTT GAGCTGATTCCATCAGCCCTGGCCCTGTCCAGTTTTCTTCAAAAATGGCTTGTATCTTTG AAGAATGTTGCTGTTGTTACTGCACGTCCCCTGCGTGAGTATGCTGTATGCAGAATACTT GAAATTATTACACCATCTGAAGGTGAAGGAGAAATCTGAACCTTGACATACACAAAAGGA TACTGCTATACATCCCCAGAATGTCAGTAGTAAACTGCTCAGCTGTGGACTACTGGATGT AAATTGTAGTCTAGCAGTTGCATATATCTCCTCCTTTTTACCNCCTTTATTAAACAAAGN TCAAACGGTCTTTAGTGTGTTAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9517#0      ACCTGGGCGAGTTGTCCGTTGGCGCCGCCGCCGGCGAGCTCGCGCACGGCCGCCGCGGCA 60
consensus_9517#1      ---------------CCGTTGGCGCCGCCGCCGGCGAGCTCGCGCACGGCCGCCGCGGCA 45
                                     *********************************************

consensus_9517#0      GTACGGGATGGCGGAGGCGGGAGTGGCGGCCGCCTCGCTCTTCGGCGCCGACCGCCGCCT 120
consensus_9517#1      GTACGGGATGGCGGAGGCGGGAGTGGCGGCCGCCTCGCTCTTCGGCGCCGACCGCCGCCT 105
                      ************************************************************

consensus_9517#0      CTGCTCCGCCGACATCCTCCCTCCCGCCGAGGTGCGGGCGAGGATCGAGGTGGCGGTGCT 180
consensus_9517#1      CTGCTCCGCCGACATCCTCCCTCCCGC--------------------------------- 132
                      ***************************                                 

consensus_9517#0      CAACTTCCTCGCGGCGCTCACCGACCCGGCCGCACCGGCCATCTCCGCCCTCCCGCTGAT 240
consensus_9517#1      ---------------------------------ACCGGCCATCTCCGCCCTCCCGCTGAT 159
                                                       ***************************

consensus_9517#0      CAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTC 300
consensus_9517#1      CAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTC 219
                      ************************************************************

consensus_9517#0      GGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGC 360
consensus_9517#1      GGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGC 279
                      ************************************************************

consensus_9517#0      ATTCGTTAGAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCT 420
consensus_9517#1      ATTCGTTAGAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCT 339
                      ************************************************************

consensus_9517#0      GGTCACCCTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTG 480
consensus_9517#1      GGTCACCCTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTG 399
                      ************************************************************

consensus_9517#0      CCAGCGGCATGTCAACCAGACTGTTCAAGATGTCTTCTCGTTGCTCCGGTGTACGAGGCA 540
consensus_9517#1      CCAGCGGCATGTCAACCAGACTGTTCAAGATGTCGTCTCGTTGCTCCGGTGTACGAGGCA 459
                      ********************************** *************************

consensus_9517#0      GAGCCTGGGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGGTGCAGGG 600
consensus_9517#1      GAGCCTGGGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGGTGCAGGG 519
                      ************************************************************

consensus_9517#0      GCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGG 660
consensus_9517#1      GCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGG 579
                      ************************************************************

consensus_9517#0      AGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGT 720
consensus_9517#1      AGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGT 639
                      ************************************************************

consensus_9517#0      GGAGAAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCGTG 780
consensus_9517#1      GGAGAAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCGTG 699
                      ************************************************************

consensus_9517#0      TATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACT 840
consensus_9517#1      TATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACT 759
                      ************************************************************

consensus_9517#0      GAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCT 900
consensus_9517#1      GAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCT 819
                      ************************************************************

consensus_9517#0      TGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATA 960
consensus_9517#1      TGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATA 879
                      ************************************************************

consensus_9517#0      TGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAG 1020
consensus_9517#1      TGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAG 939
                      ************************************************************

consensus_9517#0      CGCATATCAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAA 1080
consensus_9517#1      CGCATATCAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAA 999
                      ************************************************************

consensus_9517#0      GTTTCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGC 1140
consensus_9517#1      GTTTCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGC 1059
                      ************************************************************

consensus_9517#0      CGAGATCGAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAA 1200
consensus_9517#1      CGAGATCGAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAA 1119
                      ************************************************************

consensus_9517#0      GATTGTACAGGGTGATTACATTTGACAGTGCATTGCTGCCTGCCTCATGGTTTCTCTGGT 1260
consensus_9517#1      GATTGTACAGGGTGATTACATTTGACAGTGCATTGCTGCCTGCCTCATGGTTTCTCTGGT 1179
                      ************************************************************

consensus_9517#0      TTTACTGAGAACTGAAATTTTGAGCTGATTCCATCAGCCCTGGCCCTGTCCAGTTTTCTT 1320
consensus_9517#1      TTTACTGAGAACTGAAATTTTGAGCTGATTCCATCAGCCCTGGCCCTGTCCAGTTTTCTT 1239
                      ************************************************************

consensus_9517#0      CAAAAATGACTTGTATCTTTGAAGAATGTTGCTGTTGTTACTGCACGTCCCCTGCGTGAG 1380
consensus_9517#1      CAAAAATGGCTTGTATCTTTGAAGAATGTTGCTGTTGTTACTGCACGTCCCCTGCGTGAG 1299
                      ******** ***************************************************

consensus_9517#0      TATGCTGTATGCAGAATACTTGAAATTATTACACCATCTGAAGGTGAAGGAGAAATCTGA 1440
consensus_9517#1      TATGCTGTATGCAGAATACTTGAAATTATTACACCATCTGAAGGTGAAGGAGAAATCTGA 1359
                      ************************************************************

consensus_9517#0      ACCTTGACATACACAAAAGGATACTGCTATACATCCCCAGAATGTCAGTAGTAAACTGCT 1500
consensus_9517#1      ACCTTGACATACACAAAAGGATACTGCTATACATCCCCAGAATGTCAGTAGTAAACTGCT 1419
                      ************************************************************

consensus_9517#0      CAGCTGTGGACTACTGGATGTAAATTGTAGTCTAGCAGTTGCATATATCTCCTCCTTTTT 1560
consensus_9517#1      CAGCTGTGGACTACTGGATGTAAATTGTAGTCTAGCAGTTGCATATATCTCCTCCTTTTT 1479
                      ************************************************************

consensus_9517#0      ACCTCCTTTATTAAACAAAGATCAAACGGTCTTTAGTGTGTTAACACATGGAATATTGTC 1620
consensus_9517#1      ACCNCCTTTATTAAACAAAGNTCAAACGGTCTTTAGTGTGTTAAAAAAAAAAAAAAAAAA 1539
                      *** **************** *********************** * *   ** *     

consensus_9517#0      GGATTTACTGCAGTTCTAAGGTGCTGTTTG 1650
consensus_9517#1      A----------------------------- 1540
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)