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Oryza sativa
cluster # 9528 cluster # 9528       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9528#0 length = 951 sequences # 2  
consensus_9528#1 length = 840 sequences # 1  
consensus_9528#2 length = 655 sequences # 1  
consensus_9528#3 length = 427 sequences # 1  
consensus_9528#4 length = 162 sequences # 1  

consensusID : consensus_9528#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 951
fasta sequence
                              [TTTTCCTTCTGTCTCCACCCTCATCCAGCGATCCAAAGCCCAACACAGCAATCGAGGGTTTCGGCCTCGTCGTCCCCGCCGCCGGCGACAAGCGACGGCGAGCGAGCCAGCGACCTTCTCCCTCGCGCGCCGCGCCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGATCCAGGTATGAAGAGGGCGGCGCCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTCCCTGAGCTCGGATTCCGACGATGAAGCCGGGAAAGGGAAAGGGGACAACGCCTTCGGGCTGCCCAATTCCACCAAAGCTGCCGCACCAGACGCTATGTCGAAGAAGAAGAAACCTGGTGGTGTGGATTTCAATGCTTTGAGCCGGCATGGGTATCGTGGCGGCCCATCTGTCTTGACGGTGCCCCCTCCAAAGGTTGAGCCTAACTGGTCTTGGTCCACCGGGAAAGATCGCAACGACAAAGAAGATCAAACTGAATCCTATGAAGAACGGGAGCGCACAAGAACTGCAGTAACTGAGGGAGAAAAGCTTATTGGTGTGCGAAACCCGCAGCCGAGGCAGATGGAGAAAGAGAATAAAGATGCTTCCTTCTCACAGAAGGAAAAGCGGAA-GAGAGATCGTGGCCAGGCTAGCAGGGGGAAGAACTACGTTGAAGAAGAGAAGCGA-CTTCTGAGGGGGAGT-GGCGTCTACTCTGGCTTTGA-CA-CTTGATGCTCTGTTTT-CTGTGCCTTTGTTTGACATGCATA-G-TA-AATTG-TTTTGTGCTTGTGCTATTTGATGTGT-GTTGGTAGTTCGTGCTTAATCCTCTGCTTCCATATCTGTGGCGTTGTACTGATTGAATTGAATTCATCTTGGATCATTGGCATACCGTGTCCCATATTTGTTGGTAATTTACTAACTTGAGATGCAACTTTGTCAATCTTTGTTGCATGCACAAAA]

[+] EMBL AK107079             [TTTTCCTTCTGTCTCCACCCTCATCCAGCGATCCAAAGCCCAACACAGCAATCGAGGGTTTCGGCCTCGTCGTCCCCGCCGCCGGCGACAAGCGACGGCGAGCGAGCCAGCGACCTTCTCCCTCGCGCGCCGCGCCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGATCCAGGTATGAAGAGGGCGGCGCCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTCCCTGAGCTCGGATTCCGACGATGAAGCCGGGAAAGGGAAAGGGGACAACGCCTTCGGGCTGCCCAATTCCACCAAAGCTGCCGCACCAGACGCTATGTCGAAGAAGAAGAAACCTGGTGGTGTGGATTTCAATGCTTTGAGCCGGCATGGGTATCGTGGCGGCCCATCTGTCTTGACGGTGCCCCCTCCAAAGGTTGAGCCTAACTGGTCTTGGTCCACCGGGAAAGATCGCAACGACAAAGAAGATCAAACTGAATCCTATGAAGAACGGGAGCGCACAAGAACTGCAGTAACTGAGGGAGAAAAGCTTATTGGTGTGCGAAACCCGCAGCCGAGGCAGATGGAGAAAGAGAATAAAGATGCTTCCTTCTCACAGAAGGAAAAGCGGAA GAGAGATCGTGGCCAGGCTAGCAGGGGGAAGAACTACGTTGAAGAAGAGAAGCGA CTTCTGAGGGGGAGT GGCGTCTACTCTGGCTTTGA CA CTTGATGCTCTGTTTT CTGTGCCTTTGTTTGACATGCATA G TA AATTG TTTTGTGCTTGTGCTATTTGATGTGT GTTGGTAGTTCGTGCTTAATCCTCTGCTTCCATATCTGTGGCGTTGTACTGATTGAATTGAATTCATCTTGGATCATTGGCATACCGTGTCCCATATTTGTTGGTAATTTACTAA                                         ]
[+] EMBL BI802878             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATGGAGAAAGAGAATAAAGATGCTTCCTTCTCACAGAAGGAAAAGCGGAATGAGAGATCGTGGCCAGGCTAGCAGGGGGAAGAACTACGTTGAAGAAGAGAAGCGACCTTCTGAGGGGGAGTCGGCGTCTACTCTGGCTTTGACCACCTTGATGCTCTGTTTTCCTGTGCCTTTGTTTGACATGCATACGCTACAATTGCTTTTGTGCTTGTGCTATTTGATGTGTCCTTGGTAGTTCGTGCTTAATCCTCTGCTTCCATATCTGTGGCGTTGTACTGATTGAATTGAGTTCATCTTGGATCATTGGCATACCGTGTCCCATATTTGTTGGTAATTTACTAACTTGAGATGCAACTTTGTCAATCTTTGTTGCATGCACAAAA]


>consensus_9528#0 TTTTCCTTCTGTCTCCACCCTCATCCAGCGATCCAAAGCCCAACACAGCAATCGAGGGTT TCGGCCTCGTCGTCCCCGCCGCCGGCGACAAGCGACGGCGAGCGAGCCAGCGACCTTCTC CCTCGCGCGCCGCGCCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGAT CCAGGTATGAAGAGGGCGGCGCCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTCC CTGAGCTCGGATTCCGACGATGAAGCCGGGAAAGGGAAAGGGGACAACGCCTTCGGGCTG CCCAATTCCACCAAAGCTGCCGCACCAGACGCTATGTCGAAGAAGAAGAAACCTGGTGGT GTGGATTTCAATGCTTTGAGCCGGCATGGGTATCGTGGCGGCCCATCTGTCTTGACGGTG CCCCCTCCAAAGGTTGAGCCTAACTGGTCTTGGTCCACCGGGAAAGATCGCAACGACAAA GAAGATCAAACTGAATCCTATGAAGAACGGGAGCGCACAAGAACTGCAGTAACTGAGGGA GAAAAGCTTATTGGTGTGCGAAACCCGCAGCCGAGGCAGATGGAGAAAGAGAATAAAGAT GCTTCCTTCTCACAGAAGGAAAAGCGGAAGAGAGATCGTGGCCAGGCTAGCAGGGGGAAG AACTACGTTGAAGAAGAGAAGCGACTTCTGAGGGGGAGTGGCGTCTACTCTGGCTTTGAC ACTTGATGCTCTGTTTTCTGTGCCTTTGTTTGACATGCATAGTAAATTGTTTTGTGCTTG TGCTATTTGATGTGTGTTGGTAGTTCGTGCTTAATCCTCTGCTTCCATATCTGTGGCGTT GTACTGATTGAATTGAATTCATCTTGGATCATTGGCATACCGTGTCCCATATTTGTTGGT AATTTACTAACTTGAGATGCAACTTTGTCAATCTTTGTTGCATGCACAAAA



consensusID : consensus_9528#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 840
fasta sequence
                              [TTTTTCCTTCTGTCTCCACCCTCATCCAGCGATCCAAAGCCCAACACAGCAATCGAGGGTTTCGGCCTCGTCGTCCCCGCCGCCGGCGACAAGCGACGGCGAGCGAGCCAGCGACCTTCTCCCTCGCGCGCCGCGCCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGATCCAGGTATGAAGAGGGCGGCGCCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTCCCTGAGCTCGGATTCCGACGATGAAGCCGGGAAGGGGAAAGGGGACAACGCCTTCGGGCTGCCCAATTCCACCAAAGCTGCCGCACCAGACGGTGCACTGATCAGGAAGGCTGAAATGTATCAAGAGTATATGAAGCATATTCCAGTTCCTGCTCACCGTGGATCTGTAATCCCATGCACAACATGGCTGGGACTCGGCAGGTCGGTGAAGCAGTTATATAAGCAGCCTTTACATTACCTTACCAATGTCCTCTTGAAACAGTGGGATCAGCAGAGAGTTGGGAGTGATGATGAGCACCGGCCTCTGGATGCTATCATCCATCCTGTGAAAGCTGAGGCCCTTATTTGGATCACTGAAGAAGTCCATAGGTTGACCACCTCTAGTCAACATTTAGCCAGTCTTTGGGCATCAGCTCCAATGTATCATGCCTACATAGATCCAGTGTTCCCTCCCATAAAGTTGCAGTAGAGCGTTTTTGAGAAAAAAAAAATTAAATTGTAGTAGAAGACGTTGGTTTGGGTTGTCTGTTTTGTTGTCTTTTTAATTGCTGTAATCAGTAAGCTTGCACGGTTTGGTTTTGGTAAATCCTAACAAAGCCT]

[+] EMBL AK071675             [TTTTTCCTTCTGTCTCCACCCTCATCCAGCGATCCAAAGCCCAACACAGCAATCGAGGGTTTCGGCCTCGTCGTCCCCGCCGCCGGCGACAAGCGACGGCGAGCGAGCCAGCGACCTTCTCCCTCGCGCGCCGCGCCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGATCCAGGTATGAAGAGGGCGGCGCCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTCCCTGAGCTCGGATTCCGACGATGAAGCCGGGAAGGGGAAAGGGGACAACGCCTTCGGGCTGCCCAATTCCACCAAAGCTGCCGCACCAGACGGTGCACTGATCAGGAAGGCTGAAATGTATCAAGAGTATATGAAGCATATTCCAGTTCCTGCTCACCGTGGATCTGTAATCCCATGCACAACATGGCTGGGACTCGGCAGGTCGGTGAAGCAGTTATATAAGCAGCCTTTACATTACCTTACCAATGTCCTCTTGAAACAGTGGGATCAGCAGAGAGTTGGGAGTGATGATGAGCACCGGCCTCTGGATGCTATCATCCATCCTGTGAAAGCTGAGGCCCTTATTTGGATCACTGAAGAAGTCCATAGGTTGACCACCTCTAGTCAACATTTAGCCAGTCTTTGGGCATCAGCTCCAATGTATCATGCCTACATAGATCCAGTGTTCCCTCCCATAAAGTTGCAGTAGAGCGTTTTTGAGAAAAAAAAAATTAAATTGTAGTAGAAGACGTTGGTTTGGGTTGTCTGTTTTGTTGTCTTTTTAATTGCTGTAATCAGTAAGCTTGCACGGTTTGGTTTTGGTAAATCCTAACAAAGCCT]


>consensus_9528#1 TTTTTCCTTCTGTCTCCACCCTCATCCAGCGATCCAAAGCCCAACACAGCAATCGAGGGT TTCGGCCTCGTCGTCCCCGCCGCCGGCGACAAGCGACGGCGAGCGAGCCAGCGACCTTCT CCCTCGCGCGCCGCGCCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGA TCCAGGTATGAAGAGGGCGGCGCCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTC CCTGAGCTCGGATTCCGACGATGAAGCCGGGAAGGGGAAAGGGGACAACGCCTTCGGGCT GCCCAATTCCACCAAAGCTGCCGCACCAGACGGTGCACTGATCAGGAAGGCTGAAATGTA TCAAGAGTATATGAAGCATATTCCAGTTCCTGCTCACCGTGGATCTGTAATCCCATGCAC AACATGGCTGGGACTCGGCAGGTCGGTGAAGCAGTTATATAAGCAGCCTTTACATTACCT TACCAATGTCCTCTTGAAACAGTGGGATCAGCAGAGAGTTGGGAGTGATGATGAGCACCG GCCTCTGGATGCTATCATCCATCCTGTGAAAGCTGAGGCCCTTATTTGGATCACTGAAGA AGTCCATAGGTTGACCACCTCTAGTCAACATTTAGCCAGTCTTTGGGCATCAGCTCCAAT GTATCATGCCTACATAGATCCAGTGTTCCCTCCCATAAAGTTGCAGTAGAGCGTTTTTGA GAAAAAAAAAATTAAATTGTAGTAGAAGACGTTGGTTTGGGTTGTCTGTTTTGTTGTCTT TTTAATTGCTGTAATCAGTAAGCTTGCACGGTTTGGTTTTGGTAAATCCTAACAAAGCCT



consensusID : consensus_9528#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 655
fasta sequence
                              [CATTTAAGTTTTGGANGCATAGACACTACAANTAGGAACAACTTATTTGGAAAAAANACTCAAATATGAAATAGGTCTAACTCTTGTGGATGGAGTATAATTTTAGTTCTCAAGCACTAATAGAGGCTTTGAGCTGGATTTTATACCCTTCAGACATGGACAATAGCGTTCTGCTTTGGATTGGCTCATGTAGTTTTAAGGTTTTTTTCCTTTCTACGTAGAGATACAAATTTCCATGCTTACTATAATGAGATCATGCAGGTGCACTGATCAGGAAGGCTGAAATGTATCAAGAGTATATGAAGCATATTCCAGTTCCTGCTCACCGTGGATCTGTAATCCCATGCACAACATGGCTGGGACTCGGCAGGTCGGTGAAGCAGTTATATAAGCAGCCTTTACATTNCCTTACCAATGTCCTCTTGAAACAGTGGGATCAGCAGAGAGTTGGGAGTGATGATGAGCACCGGCCTCTGGATGCTATCATCCATCCTGTGAAAGCTGAGGCCNTTATTTGGATCACTGAAGAAGTCCATAGGTTGACCACCTCTAGTCAACATTTAGCCAGTCTTTGGGCATCAGCTCCAATGTATCATGCCTACATAGATCCAGTGTTCCCTCCNNTAAAGTTGCAGTAGAGCGTTTTTGAGAAAAA]

[+] EMBL AU088726             [CATTTAAGTTTTGGANGCATAGACACTACAANTAGGAACAACTTATTTGGAAAAAANACTCAAATATGAAATAGGTCTAACTCTTGTGGATGGAGTATAATTTTAGTTCTCAAGCACTAATAGAGGCTTTGAGCTGGATTTTATACCCTTCAGACATGGACAATAGCGTTCTGCTTTGGATTGGCTCATGTAGTTTTAAGGTTTTTTTCCTTTCTACGTAGAGATACAAATTTCCATGCTTACTATAATGAGATCATGCAGGTGCACTGATCAGGAAGGCTGAAATGTATCAAGAGTATATGAAGCATATTCCAGTTCCTGCTCACCGTGGATCTGTAATCCCATGCACAACATGGCTGGGACTCGGCAGGTCGGTGAAGCAGTTATATAAGCAGCCTTTACATTNCCTTACCAATGTCCTCTTGAAACAGTGGGATCAGCAGAGAGTTGGGAGTGATGATGAGCACCGGCCTCTGGATGCTATCATCCATCCTGTGAAAGCTGAGGCCNTTATTTGGATCACTGAAGAAGTCCATAGGTTGACCACCTCTAGTCAACATTTAGCCAGTCTTTGGGCATCAGCTCCAATGTATCATGCCTACATAGATCCAGTGTTCCCTCCNNTAAAGTTGCAGTAGAGCGTTTTTGAGAAAAA]


>consensus_9528#2 CATTTAAGTTTTGGANGCATAGACACTACAANTAGGAACAACTTATTTGGAAAAAANACT CAAATATGAAATAGGTCTAACTCTTGTGGATGGAGTATAATTTTAGTTCTCAAGCACTAA TAGAGGCTTTGAGCTGGATTTTATACCCTTCAGACATGGACAATAGCGTTCTGCTTTGGA TTGGCTCATGTAGTTTTAAGGTTTTTTTCCTTTCTACGTAGAGATACAAATTTCCATGCT TACTATAATGAGATCATGCAGGTGCACTGATCAGGAAGGCTGAAATGTATCAAGAGTATA TGAAGCATATTCCAGTTCCTGCTCACCGTGGATCTGTAATCCCATGCACAACATGGCTGG GACTCGGCAGGTCGGTGAAGCAGTTATATAAGCAGCCTTTACATTNCCTTACCAATGTCC TCTTGAAACAGTGGGATCAGCAGAGAGTTGGGAGTGATGATGAGCACCGGCCTCTGGATG CTATCATCCATCCTGTGAAAGCTGAGGCCNTTATTTGGATCACTGAAGAAGTCCATAGGT TGACCACCTCTAGTCAACATTTAGCCAGTCTTTGGGCATCAGCTCCAATGTATCATGCCT ACATAGATCCAGTGTTCCCTCCNNTAAAGTTGCAGTAGAGCGTTTTTGAGAAAAA



consensusID : consensus_9528#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 427
fasta sequence
                              [GGGTTTCGGCCTCGTCGTCCCCGCCGCCGGGACAGCGACGGCGAGCGAGCCAGCGACCTTCTCCCTCGCGCGCCGGCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGATCCAGGTATGAAGAGGGCGGCGNCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTCCCTGAGCTCGGATTCCGACGATGAAGCCGGGAAGGGGAAAGGGGACAACGGCTTCGGGCTGCCCAATTCCACCAAAGCTGCCGCACCAGACGGTGAGAGCTATCCCAGTGATCTGTCTCTGTCTTTTTGTTAGCTCACGAGGAGATTTTTCATATTTTTGGTTTGTTAGCATGCTATATGGCCTCGTATGTTTNACAAAGATTGTTTTGAATGNCTGTATTGTGTGTTNCTGTGAGATATGAGTTCA]

[+] EMBL OSC0531              [GGGTTTCGGCCTCGTCGTCCCCGCCGCCGGGACAGCGACGGCGAGCGAGCCAGCGACCTTCTCCCTCGCGCGCCGGCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGATCCAGGTATGAAGAGGGCGGCGNCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTCCCTGAGCTCGGATTCCGACGATGAAGCCGGGAAGGGGAAAGGGGACAACGGCTTCGGGCTGCCCAATTCCACCAAAGCTGCCGCACCAGACGGTGAGAGCTATCCCAGTGATCTGTCTCTGTCTTTTTGTTAGCTCACGAGGAGATTTTTCATATTTTTGGTTTGTTAGCATGCTATATGGCCTCGTATGTTTNACAAAGATTGTTTTGAATGNCTGTATTGTGTGTTNCTGTGAGATATGAGTTCA]


>consensus_9528#3 GGGTTTCGGCCTCGTCGTCCCCGCCGCCGGGACAGCGACGGCGAGCGAGCCAGCGACCTT CTCCCTCGCGCGCCGGCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGA TCCAGGTATGAAGAGGGCGGCGNCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTC CCTGAGCTCGGATTCCGACGATGAAGCCGGGAAGGGGAAAGGGGACAACGGCTTCGGGCT GCCCAATTCCACCAAAGCTGCCGCACCAGACGGTGAGAGCTATCCCAGTGATCTGTCTCT GTCTTTTTGTTAGCTCACGAGGAGATTTTTCATATTTTTGGTTTGTTAGCATGCTATATG GCCTCGTATGTTTNACAAAGATTGTTTTGAATGNCTGTATTGTGTGTTNCTGTGAGATAT GAGTTCA



consensusID : consensus_9528#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 162
fasta sequence
                              [ACGTTGAAGAAGAGAAGCAACTTCTGAGGGGGAGTGGCGTCTACTCTGGCTTTGACACTTGATGCTCTGTTTTCTGTGCCTTTGTTTGACATGCATAGTAAATTGTTTTGTGCTTGTGCTATTTGATGTGTGTTGGTAGTTCGTGCTTAAAAAAAAAAAAAA]

[+] EMBL CB096645             [ACGTTGAAGAAGAGAAGCAACTTCTGAGGGGGAGTGGCGTCTACTCTGGCTTTGACACTTGATGCTCTGTTTTCTGTGCCTTTGTTTGACATGCATAGTAAATTGTTTTGTGCTTGTGCTATTTGATGTGTGTTGGTAGTTCGTGCTTAAAAAAAAAAAAAA]


>consensus_9528#4 ACGTTGAAGAAGAGAAGCAACTTCTGAGGGGGAGTGGCGTCTACTCTGGCTTTGACACTT GATGCTCTGTTTTCTGTGCCTTTGTTTGACATGCATAGTAAATTGTTTTGTGCTTGTGCT ATTTGATGTGTGTTGGTAGTTCGTGCTTAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9528#0      TTTTCCTTCTGTCTCCACCCTCATCCAGCGATCCAAAGCCCAACACAGCAATCGAGGGTT 60
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      ------------------------------------------------------------
consensus_9528#1      ------------------------------------------------------------
consensus_9528#2      ------------------------------------------------------------
                                                                                  

consensus_9528#0      TCGGCCTCGTCGTCCCCGCCGCCGGCGACAAGCGACGGCGAGCGAGCCAGCGACCTTCTC 120
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      ------------------------------------------------------------
consensus_9528#1      ------------------------------------------------------------
consensus_9528#2      ------------------------------------------------------------
                                                                                  

consensus_9528#0      CCTCGCGCGCCGCGCCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGAT 180
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      ------------------------------------------------------------
consensus_9528#1      TTTTTCCTTCTGTCTCCACCCTCATCCAGCGATCCAAAGCCCAACACAGCAATCGAGGGT 60
consensus_9528#2      -------------------------------------------------CATTTAA--GT 9
                                                                                  

consensus_9528#0      CCAGGTATGAAGAGGGCGGCGCCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTCC 240
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      ------------------------------------------------------------
consensus_9528#1      TTCGGCCTCGTCGTCCCCGCCGCCGGCGACAAGCGACGGCGAGCGAGCCAGCGACCTTCT 120
consensus_9528#2      TTTGGANGCATAGACACTACAANTAGGAACAACTTATTTGGAAAAAANA----------- 58
                                                                                  

consensus_9528#0      CTGAGCTCGGATTCCGACGATGAAGCCGGGAAAGGGAAAGGGGACAACGCCTTCGGGCTG 300
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      ------------------------------------------------------------
consensus_9528#1      CCCTCGCGCGCCGCGCCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCGTGA 180
consensus_9528#2      --CTCAAATATGAAATAGGTCTAACTCTTGTGGATGG-------AGTATAATTTTAGTTC 109
                                                                                  

consensus_9528#0      CCCAATTCCACCAAAGCTGCCGCACCAGACGCTATGTCGAAGAAGAAGAAACCTGGTGGT 360
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      ------------------------------------------------------------
consensus_9528#1      TCCAGGTATGAAGAGGGCGGCGCCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGACTC 240
consensus_9528#2      TCAAGCACTAATAGAGGCTTTGAGCTGGATTTTATACCCTTCAGACATGGACAATAGCGT 169
                                                                                  

consensus_9528#0      GTGGATTTCAATGCTTTGAGCCGGCATGGGTATCGTGGCGGCCCATCTGTCTTGACGGTG 420
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      ------------------------------------------------------------
consensus_9528#1      CCTGAGCTCGGATTCCGACGATGAAGCCGGGAAGGGGAAAGGGGACAACGCCTTCGGGCT 300
consensus_9528#2      TCT--GCTTTGGATTGGCTCATGTAGTTT--TAAGGTTTTTTTCCTTTCTACGTAGAGAT 225
                                                                                  

consensus_9528#0      CCCCCTCCAAAGGTTGAGCCTAACTGGTCTTGGTCCACCGGGAAAGATCGCAACGACAAA 480
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      ---GGGTTTCGGCCTCGTCGTCCCCGCCGCCGGGACAGCGACGGCGAGCGAGCCAGCGAC 57
consensus_9528#1      GCCCAATTCCACCAAAGCTGCCGC-----ACCAGAC-GGTGCACTGATCAGGAAGGCTGA 354
consensus_9528#2      ACAAATTTCCATGCTTACTATAATGA--GATCATGCAGGTGCACTGATCAGGAAGGCTGA 283
                                                                                  

consensus_9528#0      GAAGATCAAACTGAATCCTATGAAGAACGGGAGCGCACAAGAACTGCAGTAAC-TGAGGG 539
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      CTTCTCCCTCGCGCGCCGGCGCTTCTCCCTCGGCGCGCCGTGCCGCCGGTGACGTCTCCG 117
consensus_9528#1      AATGTATCAAGAGTATATGAAGCATATTCCAGTTCCTGCTCACCGTGGATCTGTAATCCC 414
consensus_9528#2      AATGTATCAAGAGTATATGAAGCATATTCCAGTTCCTGCTCACCGTGGATCTGTAATCCC 343
                                                                                  

consensus_9528#0      AGAAAAGCTTATTGGTGTGCGAAACCCGCAGCCGAGGCAGATGGAGAAAGAGAATAAAGA 599
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      TGATCCAGGTATGAAGAGGGCGGCGNCGTGGGAGGAGCCGCTGGAAGTCTCCTCCGACGA 177
consensus_9528#1      ATGCACAACATGGCTGGGACTCGGCAGGTCGGTGAAGCAGTTATATAAGCAGCCTTTACA 474
consensus_9528#2      ATGCACAACATGGCTGGGACTCGGCAGGTCGGTGAAGCAGTTATATAAGCAGCCTTTACA 403
                                                                                  

consensus_9528#0      TGCTTCCTTCTCACAGAAGGAAAAGCGGAAGAGAGATCGTGGCCAGGCTAGCAGGGGGAA 659
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      CTCCCTGAGCTCGGATTCCGACGATGAAGCCGGGAAGGGGAAAGGGGACAACGGCTTCGG 237
consensus_9528#1      TTACCTTACCAATGTCCTCTTGAAACAGTGGGATCAGCAGAGAGTTGGGAGTGATGATGA 534
consensus_9528#2      TTNCCTTACCAATGTCCTCTTGAAACAGTGGGATCAGCAGAGAGTTGGGAGTGATGATGA 463
                                                                                  

consensus_9528#0      GAACTA-CG-TTGAAGAAGAGAAGCGA-CTTCTGAGGGGGAGTGGCGTC----TACTCT- 711
consensus_9528#4      -----A-CG-TTGAAGAAGAGAAGCAA-CTTCTGAGGGGGAGTGGCGTC----TACTCT- 47
consensus_9528#3      GCTGCC-CAATTCCACCAAAGCTGCCG-CACCAGACGGTGAGAGCTATCCCAGTGATCT- 294
consensus_9528#1      GCACCGGCCTCTGGATGCTATCATCCATCCTGTGAAAGCTGAGGCCCTTATTTGGATCAC 594
consensus_9528#2      GCACCGGCCTCTGGATGCTATCATCCATCCTGTGAAAGCTGAGGCCNTTATTTGGATCAC 523
                             *   *  *    *    *   *    **  *     *   *        **  

consensus_9528#0      -----GGCTTTGACACTTGAT--GCTCT-------GTTTTCTGTGCCTTTGTTTGACATG 757
consensus_9528#4      -----GGCTTTGACACTTGAT--GCTCT-------GTTTTCTGTGCCTTTGTTTGACATG 93
consensus_9528#3      -----GTCTCTGTCTTTTTGTTAGCTCACGAGGAGATTTTTCATATTTTTGGTTTGTTAG 349
consensus_9528#1      TGAAGAAGTCCATAGGTTGACCACCTCTAGTCAACATTTAGCCAGTCTTTGGGCATCAGC 654
consensus_9528#2      TGAAGAAGTCCATAGGTTGACCACCTCTAGTCAACATTTAGCCAGTCTTTGGGCATCAGC 583
                              *       **      ***         ***        ****         

consensus_9528#0      CATAGTAAATTGT-TTTGTGCTTGTGCTA-----TTTGATGTGTGTTGGTAGT-TCGTGC 810
consensus_9528#4      CATAGTAAATTGT-TTTGTGCTTGTGCTA-----TTTGATGTGTGTTGGTAGT-TCGTGC 146
consensus_9528#3      CATGCTATATGGC-CTCGTATGTTTNACAAAGATTGTTTTGAATGNCTGTATT-GTGTGT 407
consensus_9528#1      TCCAATGTATCATGCCTACATAGATCCAGTGTTCCCTCCCATAAAGTTGCAGTAGAGCGT 714
consensus_9528#2      TCCAATGTATCATGCCTACATAGATCCAGTGTTCCCTCCNNTAAAGTTGCAGTAGAGCGT 643
                           *  **              *           *           * * *   * * 

consensus_9528#0      TTAATCCTCTGCTTCCATATCTGTGGCGTTGTACTGATTGAATTGAATTCATCTTGGATC 870
consensus_9528#4      TTAAAAAAAAAAAAAA-------------------------------------------- 162
consensus_9528#3      TNCTGTGAGATATGAGTTCA---------------------------------------- 427
consensus_9528#1      TTTTGAGAAAAAAAAAATTAAATTGTAGTAGAAGACGTTGGTTTGGGTTGTCTGTTTTGT 774
consensus_9528#2      TTTTGAGAAAAA------------------------------------------------ 655
                      *                                                           

consensus_9528#0      ATTGGCATACCGTGTCCCATATTTGTTGGTAATTTACTAACTTGAGATGCAACTTTGTCA 930
consensus_9528#4      ------------------------------------------------------------
consensus_9528#3      ------------------------------------------------------------
consensus_9528#1      TGTCTTTTTAATTGCTGTAATCAGTAAGCTTGCACGGTTTGGTTTTGGTAAATCCTAACA 834
consensus_9528#2      ------------------------------------------------------------
                                                                                  

consensus_9528#0      ATCTTTGTTGCATGCACAAAA 951
consensus_9528#4      ---------------------
consensus_9528#3      ---------------------
consensus_9528#1      AAGCCT--------------- 840
consensus_9528#2      ---------------------
                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)