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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9551#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2451 fasta sequence
[CAAACGAATCGCACTTCGCAGAGGCGAAGCGAAGTAGCGCTGCCTTGCCTTGTCGCCCTTCCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCACCCTAGCCCCTGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAGGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGGTAAGATCGGTTCAAGGTGCCGCAGCACCTATTTGCTGCTTCGCCTTTTCTGTTATCATTCGACAATCCCATGGAGTTAGTATGATTCCTTGGTAAACGAAGCTTGGTTAGACCTTGATAAGTTAAGCGAAACTTGTTCAAAGCAAATATAGGTTTGGGTTGGTTTGAAAAAGATATAACCGTGGATTGTTTAAGGCCAAAGTAGCTAGCTACTGTTTTGTAGTGTTTAGTTGATGCAAATCTGAAATATTATCGATTGATTGTGAGAAGATGATACATTTGGAAGAAATTAGTTCTTAAATGTTTGGGAACCACAGTTCTGGACTTAAACAATTTTTTTAATTGGTGTTTGTCTACAGGATATACAGCCAGCTTTTCTTGTCAACTTGGAGATTTAGTTATGCTAACTTAGCTATACGAAAAATACATACCAAGCCAGTTTTGTGAGTAAAAACTAACATTATATAGTAGGATCGAATTGATTCCTCATCGGCTTTTCTTGAGCTATTTTTCATCCAATTGATGATCAATTGCACATGAGAACACGCACCAAATTTGTAGTTCTTCTCATATTCAACTTCTGTATAATGCTGATAATCTCAGATCGATCTTTTCTAATCTGCAGAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATGTGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAAT-CATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGAATTGGATTGAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK099759 [CAAACGAATCGCACTTCGCAGAGGCGAAGCGAAGTAGCGCTGCCTTGCCTTGTCGCCCTTCCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCACCCTAGCCCCTGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAGGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGGTAAGATCGGTTCAAGGTGCCGCAGCACCTATTTGCTGCTTCGCCTTTTCTGTTATCATTCGACAATCCCATGGAGTTAGTATGATTCCTTGGTAAACGAAGCTTGGTTAGACCTTGATAAGTTAAGCGAAACTTGTTCAAAGCAAATATAGGTTTGGGTTGGTTTGAAAAAGATATAACCGTGGATTGTTTAAGGCCAAAGTAGCTAGCTACTGTTTTGTAGTGTTTAGTTGATGCAAATCTGAAATATTATCGATTGATTGTGAGAAGATGATACATTTGGAAGAAATTAGTTCTTAAATGTTTGGGAACCACAGTTCTGGACTTAAACAATTTTTTTAATTGGTGTTTGTCTACAGGATATACAGCCAGCTTTTCTTGTCAACTTGGAGATTTAGTTATGCTAACTTAGCTATACGAAAAATACATACCAAGCCAGTTTTGTGAGTAAAAACTAACATTATATAGTAGGATCGAATTGATTCCTCATCGGCTTTTCTTGAGCTATTTTTCATCCAATTGATGATCAATTGCACATGAGAACACGCACCAAATTTGTAGTTCTTCTCATATTCAACTTCTGTATAATGCTGATAATCTCAGATCGATCTTTTCTAATCTGCAGAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATGTGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAAT CATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGA ]
[+] EMBL AU094101 [ GCTANTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTNTCATTTGCAGCAGTAGAAACTCNCAAGTGGTANCTTCAAAAGTTTGAAGACTATCCTCGCACTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATNCATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTNATGCTGTGTGTTATGCTACNCACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGAATTGGATTGAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_9551#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1751 fasta sequence
[GCCTTGCCTTGTCGCCCTTCCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCACCCTAGCCCATGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATATGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATCATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGA]
[+] EMBL AK073542 [GCCTTGCCTTGTCGCCCTTCCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCACCCTAGCCCATGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATATGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATCATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGA]
[+] EMBL AK104042 [ CATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCACCCTAGCCCCTGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATATGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATCATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGA]
[+] EMBL CA765939 [ AGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCCGAGACGACTATATGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGNTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATCATGCAAAGCTTATGTATTTGCACACAATTACGACATGNAACTTAGCTTGATGTAAATGNGATAACAATCATACTACGTACCACCGTANAGGCTGGAAGTGTTGTATTGTATAACGTAG CNCGCANAA GGACCTGGGACACTTNATGCTGGGGGGTATGCTACACACTTGGA ANTTAT NACATTCTTAANCATCGGGAANAAAGTTCTTGCAna]
consensusID : consensus_9551#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 441 fasta sequence
[CCCAACAAGAAATTCCTACTCTGTCTGCCTTGTGTCAGGCGGCAATCGAGCTGGGGGCGGTGTTACAATGGAGTTATGGGCAGGCAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGGTTCCACAAAAATACTTCATGCATTTTTAATGTGGTCGGAGTGCTTGGCAACAACAATTTTGCTTCTGGCAANATGGTTCAAT]
[+] EMBL C72891 [CCCAACAAGAAATTCCTACTCTGTCTGCCTTGTGTCAGGCGGCAATCGAGCTGGGGGCGGTGTTACAATGGAGTTATGGGCAGGCAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGGTTCCACAAAAATACTTCATGCATTTTTAATGTGGTCGGAGTGCTTGGCAACAACAATTTTGCTTCTGGCAANATGGTTCAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9551#0 CAAACGAATCGCACTTCGCAGAGGCGAAGCGAAGTAGCGCTGCCTTGCCTTGTCGCCCTT 60
consensus_9551#1 -----------------------------------------GCCTTGCCTTGTCGCCCTT 19
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGT 120
consensus_9551#1 CCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGT 79
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCC 180
consensus_9551#1 CTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCC 139
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 TGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTG 240
consensus_9551#1 TGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTG 199
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTG 300
consensus_9551#1 CGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTG 259
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCT 360
consensus_9551#1 CGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCT 319
consensus_9551#2 -------------------------------------------CCCAACAAGAAATTCCT 17
** ** * * **
consensus_9551#0 GCACCCTAGCCCCTGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTG 420
consensus_9551#1 GCACCCTAGCCCATGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTG 379
consensus_9551#2 ACTCTGT-----CTGCCTTGTGTCAGGCGGCAATCGAGCTGGGGGCGGTGTTACAATGGA 72
* * * **** * ** ** ** ** *
consensus_9551#0 ACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCG 480
consensus_9551#1 ACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCG 439
consensus_9551#2 GTTATGGGCAGGCAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCG 132
***** ************************************************
consensus_9551#0 CTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGG 540
consensus_9551#1 CTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGG 499
consensus_9551#2 CTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGG 192
************************************************************
consensus_9551#0 ATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGT 600
consensus_9551#1 ATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGT 559
consensus_9551#2 ATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGT 252
************************************************************
consensus_9551#0 CACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAGGACCGTGAGGCCCTCC 660
consensus_9551#1 CACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCC 619
consensus_9551#2 CACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCC 312
******************************************* ****************
consensus_9551#0 CCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGGTAAGATCGGTTCAAGGTGCCGCA 720
consensus_9551#1 CCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCG------------------------ 655
consensus_9551#2 CCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCG--AAGTTCACT----GGTTCCACA 366
************************************
consensus_9551#0 GCACCTATTTGCTGCTTCGCCTTTTCTGTTATCATTCGACAATCCCATGGAGTTAGTATG 780
consensus_9551#1 ------------------------------------------------------------
consensus_9551#2 AAAA-TACTTCATGCAT------TTTTAATGTGGTCGGAGTGCTTGGCAACAACAATTTT 419
consensus_9551#0 ATTCCTTGGTAAACGAAGCTTGGTTAGACCTTGATAAGTTAAGCGAAACTTGTTCAAAGC 840
consensus_9551#1 ------------------------------------------------------------
consensus_9551#2 GCTTCTGGCAANATG--GTTCAAT------------------------------------ 441
consensus_9551#0 AAATATAGGTTTGGGTTGGTTTGAAAAAGATATAACCGTGGATTGTTTAAGGCCAAAGTA 900
consensus_9551#1 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 GCTAGCTACTGTTTTGTAGTGTTTAGTTGATGCAAATCTGAAATATTATCGATTGATTGT 960
consensus_9551#1 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 GAGAAGATGATACATTTGGAAGAAATTAGTTCTTAAATGTTTGGGAACCACAGTTCTGGA 1020
consensus_9551#1 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CTTAAACAATTTTTTTAATTGGTGTTTGTCTACAGGATATACAGCCAGCTTTTCTTGTCA 1080
consensus_9551#1 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 ACTTGGAGATTTAGTTATGCTAACTTAGCTATACGAAAAATACATACCAAGCCAGTTTTG 1140
consensus_9551#1 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 TGAGTAAAAACTAACATTATATAGTAGGATCGAATTGATTCCTCATCGGCTTTTCTTGAG 1200
consensus_9551#1 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CTATTTTTCATCCAATTGATGATCAATTGCACATGAGAACACGCACCAAATTTGTAGTTC 1260
consensus_9551#1 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 TTCTCATATTCAACTTCTGTATAATGCTGATAATCTCAGATCGATCTTTTCTAATCTGCA 1320
consensus_9551#1 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 GAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAAC 1380
consensus_9551#1 -AAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAAC 714
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 AACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCC 1440
consensus_9551#1 AACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCC 774
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 TGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTT 1500
consensus_9551#1 TGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTT 834
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 TGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGT 1560
consensus_9551#1 TGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGT 894
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 ACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATGTGAGACTGAACATGTGTTCCA 1620
consensus_9551#1 ACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATATGAGACTGAACATGTGTTCCA 954
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGT 1680
consensus_9551#1 CTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGT 1014
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 AGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGG 1740
consensus_9551#1 AGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGG 1074
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 TCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTC 1800
consensus_9551#1 TCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTC 1134
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 ATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTAT 1860
consensus_9551#1 ATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTAT 1194
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 ATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGA 1920
consensus_9551#1 ATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGA 1254
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 GCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTG 1980
consensus_9551#1 GCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTG 1314
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGA 2040
consensus_9551#1 CCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGA 1374
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 AGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGT 2100
consensus_9551#1 AGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGT 1434
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 AGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCAT 2160
consensus_9551#1 AGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCAT 1494
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTG 2220
consensus_9551#1 CATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTG 1554
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATCATACTACGTAC 2280
consensus_9551#1 CACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATCATACTACGTAC 1614
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGAC 2340
consensus_9551#1 CACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGAC 1674
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 ACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGG 2400
consensus_9551#1 ACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGG 1734
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 AATAAAGTTCTTGCAGAATTGGATTGAAAAAAAAAAAAAAAAAAAAAAAAA 2451
consensus_9551#1 AATAAAGTTCTTGCAGA---------------------------------- 1751
consensus_9551#2 ---------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||