These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9551#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2451 fasta sequence [CAAACGAATCGCACTTCGCAGAGGCGAAGCGAAGTAGCGCTGCCTTGCCTTGTCGCCCTTCCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCACCCTAGCCCCTGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAGGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGGTAAGATCGGTTCAAGGTGCCGCAGCACCTATTTGCTGCTTCGCCTTTTCTGTTATCATTCGACAATCCCATGGAGTTAGTATGATTCCTTGGTAAACGAAGCTTGGTTAGACCTTGATAAGTTAAGCGAAACTTGTTCAAAGCAAATATAGGTTTGGGTTGGTTTGAAAAAGATATAACCGTGGATTGTTTAAGGCCAAAGTAGCTAGCTACTGTTTTGTAGTGTTTAGTTGATGCAAATCTGAAATATTATCGATTGATTGTGAGAAGATGATACATTTGGAAGAAATTAGTTCTTAAATGTTTGGGAACCACAGTTCTGGACTTAAACAATTTTTTTAATTGGTGTTTGTCTACAGGATATACAGCCAGCTTTTCTTGTCAACTTGGAGATTTAGTTATGCTAACTTAGCTATACGAAAAATACATACCAAGCCAGTTTTGTGAGTAAAAACTAACATTATATAGTAGGATCGAATTGATTCCTCATCGGCTTTTCTTGAGCTATTTTTCATCCAATTGATGATCAATTGCACATGAGAACACGCACCAAATTTGTAGTTCTTCTCATATTCAACTTCTGTATAATGCTGATAATCTCAGATCGATCTTTTCTAATCTGCAGAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATGTGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAAT-CATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGAATTGGATTGAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK099759 [CAAACGAATCGCACTTCGCAGAGGCGAAGCGAAGTAGCGCTGCCTTGCCTTGTCGCCCTTCCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCACCCTAGCCCCTGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAGGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGGTAAGATCGGTTCAAGGTGCCGCAGCACCTATTTGCTGCTTCGCCTTTTCTGTTATCATTCGACAATCCCATGGAGTTAGTATGATTCCTTGGTAAACGAAGCTTGGTTAGACCTTGATAAGTTAAGCGAAACTTGTTCAAAGCAAATATAGGTTTGGGTTGGTTTGAAAAAGATATAACCGTGGATTGTTTAAGGCCAAAGTAGCTAGCTACTGTTTTGTAGTGTTTAGTTGATGCAAATCTGAAATATTATCGATTGATTGTGAGAAGATGATACATTTGGAAGAAATTAGTTCTTAAATGTTTGGGAACCACAGTTCTGGACTTAAACAATTTTTTTAATTGGTGTTTGTCTACAGGATATACAGCCAGCTTTTCTTGTCAACTTGGAGATTTAGTTATGCTAACTTAGCTATACGAAAAATACATACCAAGCCAGTTTTGTGAGTAAAAACTAACATTATATAGTAGGATCGAATTGATTCCTCATCGGCTTTTCTTGAGCTATTTTTCATCCAATTGATGATCAATTGCACATGAGAACACGCACCAAATTTGTAGTTCTTCTCATATTCAACTTCTGTATAATGCTGATAATCTCAGATCGATCTTTTCTAATCTGCAGAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATGTGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAAT CATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGA ] [+] EMBL AU094101 [ GCTANTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTNTCATTTGCAGCAGTAGAAACTCNCAAGTGGTANCTTCAAAAGTTTGAAGACTATCCTCGCACTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATNCATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTNATGCTGTGTGTTATGCTACNCACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGAATTGGATTGAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_9551#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1751 fasta sequence [GCCTTGCCTTGTCGCCCTTCCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCACCCTAGCCCATGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATATGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATCATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGA] [+] EMBL AK073542 [GCCTTGCCTTGTCGCCCTTCCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCACCCTAGCCCATGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATATGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATCATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGA] [+] EMBL AK104042 [ CATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGTCTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCCTGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTGCGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTGCGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCTGCACCCTAGCCCCTGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTGACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAACAACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCCTGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTTTGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATATGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTGCACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATCATACTACGTACCACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGACACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGGAATAAAGTTCTTGCAGA] [+] EMBL CA765939 [ AGTATCATGTCTGGCGAACAGTATTTGTACTTCTATTGATGGAAATTCAAGTGCCGAGACGACTATATGAGACTGAACATGTGTTCCACTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGTAGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGGTCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTCATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTATATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGAGCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTGCCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGAAGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGTAGAAACTCACAAGTGGTATCTTCAAAAGNTTGAAGACTATCCTCGCTCTCGCTATGCCATCATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATCATGCAAAGCTTATGTATTTGCACACAATTACGACATGNAACTTAGCTTGATGTAAATGNGATAACAATCATACTACGTACCACCGTANAGGCTGGAAGTGTTGTATTGTATAACGTAG CNCGCANAA GGACCTGGGACACTTNATGCTGGGGGGTATGCTACACACTTGGA ANTTAT NACATTCTTAANCATCGGGAANAAAGTTCTTGCAna] consensusID : consensus_9551#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 441 fasta sequence [CCCAACAAGAAATTCCTACTCTGTCTGCCTTGTGTCAGGCGGCAATCGAGCTGGGGGCGGTGTTACAATGGAGTTATGGGCAGGCAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGGTTCCACAAAAATACTTCATGCATTTTTAATGTGGTCGGAGTGCTTGGCAACAACAATTTTGCTTCTGGCAANATGGTTCAAT] [+] EMBL C72891 [CCCAACAAGAAATTCCTACTCTGTCTGCCTTGTGTCAGGCGGCAATCGAGCTGGGGGCGGTGTTACAATGGAGTTATGGGCAGGCAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCGCTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGGATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGTCACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCCCCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGAAGTTCACTGGTTCCACAAAAATACTTCATGCATTTTTAATGTGGTCGGAGTGCTTGGCAACAACAATTTTGCTTCTGGCAANATGGTTCAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9551#0 CAAACGAATCGCACTTCGCAGAGGCGAAGCGAAGTAGCGCTGCCTTGCCTTGTCGCCCTT 60 consensus_9551#1 -----------------------------------------GCCTTGCCTTGTCGCCCTT 19 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGT 120 consensus_9551#1 CCCCTTCGACTCCATTCCCTCCCGCTTCTCGCGCAACGCTATCCCGCCGCCGCCGCGTGT 79 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCC 180 consensus_9551#1 CTCCCCAATCCCAATCACTAGCCTCCTCCGTCGACCGTCCGCCTTCCCCTGAGGGCGGCC 139 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 TGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTG 240 consensus_9551#1 TGCGTCTGCGTGGCTGCGCCGTGCCGCCGTCGCGCCCCCGCAGCTTCTTGCGTCTTGCTG 199 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTG 300 consensus_9551#1 CGCGCCGTGCCACCCGCCGGCGCCTGCGCCTGCGCCTTCCTTTACCGGGCTACCACCCTG 259 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCT 360 consensus_9551#1 CGCCGTCTCTGACTCCCCGGCCGGCGGTCGCCCTGCCCGCTGCTCCTGCACGGCGTGGCT 319 consensus_9551#2 -------------------------------------------CCCAACAAGAAATTCCT 17 ** ** * * ** consensus_9551#0 GCACCCTAGCCCCTGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTG 420 consensus_9551#1 GCACCCTAGCCCATGCCCATAACTCCATTGTAACACCGCCCCCAGCTCGATTGCCGCCTG 379 consensus_9551#2 ACTCTGT-----CTGCCTTGTGTCAGGCGGCAATCGAGCTGGGGGCGGTGTTACAATGGA 72 * * * **** * ** ** ** ** * consensus_9551#0 ACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCG 480 consensus_9551#1 ACACAAGGCAGACAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCG 439 consensus_9551#2 GTTATGGGCAGGCAGAGTAGGAACACCCAACAAGAAATTCCTGGAGCTGCCATTGCGGCG 132 ***** ************************************************ consensus_9551#0 CTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGG 540 consensus_9551#1 CTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGG 499 consensus_9551#2 CTGCCTTCCATGGAGACCGAGGGCTGGCCTGCCCTCCAGCCTCTGCTGTGCCTCGCCTGG 192 ************************************************************ consensus_9551#0 ATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGT 600 consensus_9551#1 ATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGT 559 consensus_9551#2 ATCGCCACTACACTCCCCATCATTGTCGCCGCGCTGCCAATCCCCGCAGCTGCTGGTGGT 252 ************************************************************ consensus_9551#0 CACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAGGACCGTGAGGCCCTCC 660 consensus_9551#1 CACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCC 619 consensus_9551#2 CACCTCCTTCGCCGGCTGCTCTCGGCCTTCTCCTCCCGCGGCAAGACCGTGAGGCCCTCC 312 ******************************************* **************** consensus_9551#0 CCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCGGTAAGATCGGTTCAAGGTGCCGCA 720 consensus_9551#1 CCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCG------------------------ 655 consensus_9551#2 CCCGCCTCATCCTCTGGTTCCTCCTCTTCTAAGGCG--AAGTTCACT----GGTTCCACA 366 ************************************ consensus_9551#0 GCACCTATTTGCTGCTTCGCCTTTTCTGTTATCATTCGACAATCCCATGGAGTTAGTATG 780 consensus_9551#1 ------------------------------------------------------------ consensus_9551#2 AAAA-TACTTCATGCAT------TTTTAATGTGGTCGGAGTGCTTGGCAACAACAATTTT 419 consensus_9551#0 ATTCCTTGGTAAACGAAGCTTGGTTAGACCTTGATAAGTTAAGCGAAACTTGTTCAAAGC 840 consensus_9551#1 ------------------------------------------------------------ consensus_9551#2 GCTTCTGGCAANATG--GTTCAAT------------------------------------ 441 consensus_9551#0 AAATATAGGTTTGGGTTGGTTTGAAAAAGATATAACCGTGGATTGTTTAAGGCCAAAGTA 900 consensus_9551#1 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 GCTAGCTACTGTTTTGTAGTGTTTAGTTGATGCAAATCTGAAATATTATCGATTGATTGT 960 consensus_9551#1 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 GAGAAGATGATACATTTGGAAGAAATTAGTTCTTAAATGTTTGGGAACCACAGTTCTGGA 1020 consensus_9551#1 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CTTAAACAATTTTTTTAATTGGTGTTTGTCTACAGGATATACAGCCAGCTTTTCTTGTCA 1080 consensus_9551#1 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 ACTTGGAGATTTAGTTATGCTAACTTAGCTATACGAAAAATACATACCAAGCCAGTTTTG 1140 consensus_9551#1 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 TGAGTAAAAACTAACATTATATAGTAGGATCGAATTGATTCCTCATCGGCTTTTCTTGAG 1200 consensus_9551#1 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CTATTTTTCATCCAATTGATGATCAATTGCACATGAGAACACGCACCAAATTTGTAGTTC 1260 consensus_9551#1 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 TTCTCATATTCAACTTCTGTATAATGCTGATAATCTCAGATCGATCTTTTCTAATCTGCA 1320 consensus_9551#1 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 GAAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAAC 1380 consensus_9551#1 -AAGTTCACTGTTCCACAAAAATACTTCATGCATTTTTATGTGGTCGGAGTGCTGGCAAC 714 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 AACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCC 1440 consensus_9551#1 AACAATTTTGCTTCTGGCAATATGGTTCTATGCATATATGAAAATGACACCATTATTGCC 774 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 TGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTT 1500 consensus_9551#1 TGAGTCATCAAGTTATTCCACAATTGCCAGCCATCTTGTAGGCTCAAATTCATTCTCTTT 834 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 TGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGT 1560 consensus_9551#1 TGGTCGTGTTCACTCGCGCACCATGGGACACAAGTATCATGTCTGGCGAACAGTATTTGT 894 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 ACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATGTGAGACTGAACATGTGTTCCA 1620 consensus_9551#1 ACTTCTATTGATGGAAATTCAAGTGCTGAGACGACTATATGAGACTGAACATGTGTTCCA 954 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGT 1680 consensus_9551#1 CTACAGCCCTTCTGCTCGGATGCATATTGTAGGATATTTGACGGGTCTATTCTATTATGT 1014 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 AGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGG 1740 consensus_9551#1 AGCTGCACCATTATCTCTTGCTAGCTCTTGTATCCCTGAAGCAGCAGAGTATCTTCAAGG 1074 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 TCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTC 1800 consensus_9551#1 TCAAGTAGCTGAGTTCATAGTAAAGGGTCGTGCGAGAATGCCAGATCTTGTAATTGATTC 1134 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 ATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTAT 1860 consensus_9551#1 ATCATCTCTACTACAGCCTCTTCTGAAGTTGGGGTGGACCCAGTGGATAGGTGCTGTTAT 1194 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 ATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGA 1920 consensus_9551#1 ATTCATTTGGGGTTCCCTCCATCAGATCCGTTGCCATGCAATTCTTGGAACGTTGCGTGA 1254 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 GCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTG 1980 consensus_9551#1 GCACAAAGATTCTGATGAATATGTAATTCCTTGTGGTGACTGGTTTAATCGAGTCTCTTG 1314 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGA 2040 consensus_9551#1 CCCTCATTACCTTGCTGAACTAGTAATATATTTTGGCATGTTGGTTGCTAGTGGTGGAGA 1374 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 AGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGT 2100 consensus_9551#1 AGACATTCCAGTGTGGTTCCTGTTCGTATTTGTGATCACAAACCTGTCATTTGCAGCAGT 1434 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 AGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCAT 2160 consensus_9551#1 AGAAACTCACAAGTGGTATCTTCAAAAGTTTGAAGACTATCCTCGCTCTCGCTATGCCAT 1494 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTG 2220 consensus_9551#1 CATTCCATTTGTATGCTAGTGTCTACGAAATGGCTACATTATGCAAAGCTTATGTATTTG 1554 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATCATACTACGTAC 2280 consensus_9551#1 CACACAATTACGACATGTAACTTAGCTTGATGTAAATGTGATAACAATCATACTACGTAC 1614 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGAC 2340 consensus_9551#1 CACCGTAGAGGCTGGAAGTGTTGTATTGTATAACGTAGCCACGCAGAATGTACCTGTGAC 1674 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 ACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGG 2400 consensus_9551#1 ACTTCATGCTGTGTGTTATGCTACACACTTGGATATTTATCAACATTCTTAAGCATCGGG 1734 consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 AATAAAGTTCTTGCAGAATTGGATTGAAAAAAAAAAAAAAAAAAAAAAAAA 2451 consensus_9551#1 AATAAAGTTCTTGCAGA---------------------------------- 1751 consensus_9551#2 --------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||