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Oryza sativa
cluster # 9555 cluster # 9555       Sequences # 6       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9555#0 length = 1122 sequences # 1  
consensus_9555#1 length = 766 sequences # 1  
consensus_9555#2 length = 609 sequences # 1  
consensus_9555#3 length = 295 sequences # 1  
consensus_9555#4 length = 259 sequences # 1  
consensus_9555#5 length = 249 sequences # 1  

consensusID : consensus_9555#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1122
fasta sequence
                              [CCGCTCGTCTCTCGCTCTCCCAGATCCGCTCCTCTCTCTCTGAACCGCATCCCTCCCCTGCCGCCGTAACGTTCCCTGCCACCGCCCTCATCCCTCCCTGCCGCCGCGCCCGCACCTCTACGGCTCTACCTTCGCCGACACGACCCTGGATCAACGCCTCACCAACCGTCGACCCTGATGGCCTGACCTTATAAGGACGCCAACACGATCCTGATGGCCTGACCGCTGTCCCTGCTCGCCACCCATCTCACTGCCATCTCATTTCACGGTAAAAGGCTTGCTGTTGCTGCCCACTGCATGCCCGCTGGCCGTAGGTAGATACTGAGCTAAATATATACCAAAGCAAAATTCTACCTTCCCTATCAGTGTTGCTCTCCATCAGGATCGTCCTACTATCCGCTCTCTCCAAGGTGAGTCCAAGAAACCTTCTCTTGTGTCAATTCCATGAAGTTATATATCTCATCTCTCAAATATATGTGAATTGTGCTTGATTATGTCCCTCTGGTACTGTTTATTTGTATTTCTGTGGTGCTAGAAACATCTGAATTATTGTGCACATGCTCTTATCCTCACTCTAAGTACTTTTTACAACATTTTCTGGTTTATTTGGTTACTGCCAAACTGAGATCAACTGATACATCTATTCCAGCAGATGAGAAGTCCACCTAATCAGATGGGCAGGGTTGGCTTGGTTCAATTTAAGAAATCTGAATTTGGCAAATTTAAGAAATTGGTTCAATTTACGAGCAGCATCATATTAGAAATACTGACATACTCGACTGCAAAACTATTTTCAAGACTAAACTGAATTGGAGATTGATGTTCCCAAGTACTGTGATAAGAATTGAGATAGTGTGAAGTGCAGGAAACCAAATAGCACTACTACGGATCCGGGCTTCAGTGACGGGTCATCTGTGACGGGCCAACACAACTCGTCAAAGATGAGTCATCTCTGACGGGCCGAAAAAATATCCTCTTCAATATATTGCTACTAGGGAGGACCCATCACAGATGTATCGTTTACTAATAATTAGCTCTTCAACAGAACCTGTTGCTCATATATTTGACATGGTTTTGTACAGTAGATAATAATCAAGATTCAGTAATGAGAGTATAGAAGAT]

[+] EMBL AK063612             [CCGCTCGTCTCTCGCTCTCCCAGATCCGCTCCTCTCTCTCTGAACCGCATCCCTCCCCTGCCGCCGTAACGTTCCCTGCCACCGCCCTCATCCCTCCCTGCCGCCGCGCCCGCACCTCTACGGCTCTACCTTCGCCGACACGACCCTGGATCAACGCCTCACCAACCGTCGACCCTGATGGCCTGACCTTATAAGGACGCCAACACGATCCTGATGGCCTGACCGCTGTCCCTGCTCGCCACCCATCTCACTGCCATCTCATTTCACGGTAAAAGGCTTGCTGTTGCTGCCCACTGCATGCCCGCTGGCCGTAGGTAGATACTGAGCTAAATATATACCAAAGCAAAATTCTACCTTCCCTATCAGTGTTGCTCTCCATCAGGATCGTCCTACTATCCGCTCTCTCCAAGGTGAGTCCAAGAAACCTTCTCTTGTGTCAATTCCATGAAGTTATATATCTCATCTCTCAAATATATGTGAATTGTGCTTGATTATGTCCCTCTGGTACTGTTTATTTGTATTTCTGTGGTGCTAGAAACATCTGAATTATTGTGCACATGCTCTTATCCTCACTCTAAGTACTTTTTACAACATTTTCTGGTTTATTTGGTTACTGCCAAACTGAGATCAACTGATACATCTATTCCAGCAGATGAGAAGTCCACCTAATCAGATGGGCAGGGTTGGCTTGGTTCAATTTAAGAAATCTGAATTTGGCAAATTTAAGAAATTGGTTCAATTTACGAGCAGCATCATATTAGAAATACTGACATACTCGACTGCAAAACTATTTTCAAGACTAAACTGAATTGGAGATTGATGTTCCCAAGTACTGTGATAAGAATTGAGATAGTGTGAAGTGCAGGAAACCAAATAGCACTACTACGGATCCGGGCTTCAGTGACGGGTCATCTGTGACGGGCCAACACAACTCGTCAAAGATGAGTCATCTCTGACGGGCCGAAAAAATATCCTCTTCAATATATTGCTACTAGGGAGGACCCATCACAGATGTATCGTTTACTAATAATTAGCTCTTCAACAGAACCTGTTGCTCATATATTTGACATGGTTTTGTACAGTAGATAATAATCAAGATTCAGTAATGAGAGTATAGAAGAT]


>consensus_9555#0 CCGCTCGTCTCTCGCTCTCCCAGATCCGCTCCTCTCTCTCTGAACCGCATCCCTCCCCTG CCGCCGTAACGTTCCCTGCCACCGCCCTCATCCCTCCCTGCCGCCGCGCCCGCACCTCTA CGGCTCTACCTTCGCCGACACGACCCTGGATCAACGCCTCACCAACCGTCGACCCTGATG GCCTGACCTTATAAGGACGCCAACACGATCCTGATGGCCTGACCGCTGTCCCTGCTCGCC ACCCATCTCACTGCCATCTCATTTCACGGTAAAAGGCTTGCTGTTGCTGCCCACTGCATG CCCGCTGGCCGTAGGTAGATACTGAGCTAAATATATACCAAAGCAAAATTCTACCTTCCC TATCAGTGTTGCTCTCCATCAGGATCGTCCTACTATCCGCTCTCTCCAAGGTGAGTCCAA GAAACCTTCTCTTGTGTCAATTCCATGAAGTTATATATCTCATCTCTCAAATATATGTGA ATTGTGCTTGATTATGTCCCTCTGGTACTGTTTATTTGTATTTCTGTGGTGCTAGAAACA TCTGAATTATTGTGCACATGCTCTTATCCTCACTCTAAGTACTTTTTACAACATTTTCTG GTTTATTTGGTTACTGCCAAACTGAGATCAACTGATACATCTATTCCAGCAGATGAGAAG TCCACCTAATCAGATGGGCAGGGTTGGCTTGGTTCAATTTAAGAAATCTGAATTTGGCAA ATTTAAGAAATTGGTTCAATTTACGAGCAGCATCATATTAGAAATACTGACATACTCGAC TGCAAAACTATTTTCAAGACTAAACTGAATTGGAGATTGATGTTCCCAAGTACTGTGATA AGAATTGAGATAGTGTGAAGTGCAGGAAACCAAATAGCACTACTACGGATCCGGGCTTCA GTGACGGGTCATCTGTGACGGGCCAACACAACTCGTCAAAGATGAGTCATCTCTGACGGG CCGAAAAAATATCCTCTTCAATATATTGCTACTAGGGAGGACCCATCACAGATGTATCGT TTACTAATAATTAGCTCTTCAACAGAACCTGTTGCTCATATATTTGACATGGTTTTGTAC AGTAGATAATAATCAAGATTCAGTAATGAGAGTATAGAAGAT



consensusID : consensus_9555#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 766
fasta sequence
                              [AGNATATAGGGNCTATCCATTTTCTTGACTGAATAGGGCTATCCATTTAGATTCCAATTGTTATGTAATATTAAGAAGTAGGAGGGGTGGTAGGTNCAATGCCACCACCATTNGAAGTGAGTATAGAATCTTGGTGTGCCCACTTGTATATGTATGTATATGTGCCAAAGGAATGAAGCATGTCATATGCCACTTGTATGCTATTTATCGCCTTTGGAAGTTGAGCTTGGAGATGCTGAGACCAAAAAGGATGGCAAACAAGGTGGGAAACATGGCCAAAATTATGGCTGCTAGTGGCAGTAGGTCACGGTGGAAACCGAAGTAGTCCTTGATGAAGGCGGCCACAGATTTAGTCTCTCCAAATACAGAAATCTCCTTCTCATGCTCATCCCCAAATTGTGTGGTGAAGAAAACGTTGAGTGTCCATGACAATGGGGAAGTGTAGTACAGCCATATCCACCATCTCGGAATTTGTGGTGCAGGAACGATGAAGCCAAACATGAGGTTCTGCAGGGTGTAGAACATGGATGCCAATATAGATGCCACTTGGATATTTGGGGTGAGTGCCACTATCATCATTCCCAAGTAGAGGAACACTACTACAGATCCGGGCTTCAGTGACGGGTCATCTGTGACGGGCCAACGCAACTCGTCAAAGATGAGTCATCTCTGACGGGCCAAAAAAATATCCTCTTCAATATATGGCTACCAGGGAGGACCCGTCACAGATGTGAAGTCATCTGTGACAGCTTGCACTTGAACCCAT]

[-] EMBL CA766205             [AGNATATAGGGNCTATCCATTTTCTTGACTGAATAGGGCTATCCATTTAGATTCCAATTGTTATGTAATATTAAGAAGTAGGAGGGGTGGTAGGTNCAATGCCACCACCATTNGAAGTGAGTATAGAATCTTGGTGTGCCCACTTGTATATGTATGTATATGTGCCAAAGGAATGAAGCATGTCATATGCCACTTGTATGCTATTTATCGCCTTTGGAAGTTGAGCTTGGAGATGCTGAGACCAAAAAGGATGGCAAACAAGGTGGGAAACATGGCCAAAATTATGGCTGCTAGTGGCAGTAGGTCACGGTGGAAACCGAAGTAGTCCTTGATGAAGGCGGCCACAGATTTAGTCTCTCCAAATACAGAAATCTCCTTCTCATGCTCATCCCCAAATTGTGTGGTGAAGAAAACGTTGAGTGTCCATGACAATGGGGAAGTGTAGTACAGCCATATCCACCATCTCGGAATTTGTGGTGCAGGAACGATGAAGCCAAACATGAGGTTCTGCAGGGTGTAGAACATGGATGCCAATATAGATGCCACTTGGATATTTGGGGTGAGTGCCACTATCATCATTCCCAAGTAGAGGAACACTACTACAGATCCGGGCTTCAGTGACGGGTCATCTGTGACGGGCCAACGCAACTCGTCAAAGATGAGTCATCTCTGACGGGCCAAAAAAATATCCTCTTCAATATATGGCTACCAGGGAGGACCCGTCACAGATGTGAAGTCATCTGTGACAGCTTGCACTTGAACCCAT]


>consensus_9555#1 AGNATATAGGGNCTATCCATTTTCTTGACTGAATAGGGCTATCCATTTAGATTCCAATTG TTATGTAATATTAAGAAGTAGGAGGGGTGGTAGGTNCAATGCCACCACCATTNGAAGTGA GTATAGAATCTTGGTGTGCCCACTTGTATATGTATGTATATGTGCCAAAGGAATGAAGCA TGTCATATGCCACTTGTATGCTATTTATCGCCTTTGGAAGTTGAGCTTGGAGATGCTGAG ACCAAAAAGGATGGCAAACAAGGTGGGAAACATGGCCAAAATTATGGCTGCTAGTGGCAG TAGGTCACGGTGGAAACCGAAGTAGTCCTTGATGAAGGCGGCCACAGATTTAGTCTCTCC AAATACAGAAATCTCCTTCTCATGCTCATCCCCAAATTGTGTGGTGAAGAAAACGTTGAG TGTCCATGACAATGGGGAAGTGTAGTACAGCCATATCCACCATCTCGGAATTTGTGGTGC AGGAACGATGAAGCCAAACATGAGGTTCTGCAGGGTGTAGAACATGGATGCCAATATAGA TGCCACTTGGATATTTGGGGTGAGTGCCACTATCATCATTCCCAAGTAGAGGAACACTAC TACAGATCCGGGCTTCAGTGACGGGTCATCTGTGACGGGCCAACGCAACTCGTCAAAGAT GAGTCATCTCTGACGGGCCAAAAAAATATCCTCTTCAATATATGGCTACCAGGGAGGACC CGTCACAGATGTGAAGTCATCTGTGACAGCTTGCACTTGAACCCAT



consensusID : consensus_9555#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 609
fasta sequence
                              [AGATNCTGAGCTAAATATATNCCAAAGCAAAATTCTACTTTCCCTATCAGTGTTGCTCTCCATCAGGATCGTCCTACTATCCGCTCTCTCCAAGGGATCCAGTCCAGATCGATCTCGCCCCTCATCTCCATCTCCACGCCGCCAGATCGCCATCGCTCGGATTCTGGTGCATATCGTCGCCAATCTGATCTCCGCACCGCAACTCCATTGCATCCCTCGCCGGTCTGTCCGCCAACACGTTGTTGCCACCTCCTCCGCCTCAAGCGCCACCACAGCCAACCCAAATTCCCTCCGCCACCGAGAGGAGAGCCTGTATTCTCGCAAGGGCAGCTTTATGTTGCATTATCAAGAGGGGTGTCAAGGAAAACGACAAAGATTTTGGCAAAGCCTTAAAAAAAAGGTGGACCCCACAAGAAGGAGCACAAGAAATATCGTGTATAAAGATGTTCTGGATTGGTGAACAATGACGGCACGTCAGGAGAAACATATACGGTACCACGTGATTGTCACTGGAGTAACTATTTATGTTTTTTTCTTCAACCTTAATAACATCCGTTCTATGTGGAAATGTAATGCCTTTAAAATATCAAAAGTTTAAAGTCAAAAAAA]

[+] EMBL AU094404             [AGATNCTGAGCTAAATATATNCCAAAGCAAAATTCTACTTTCCCTATCAGTGTTGCTCTCCATCAGGATCGTCCTACTATCCGCTCTCTCCAAGGGATCCAGTCCAGATCGATCTCGCCCCTCATCTCCATCTCCACGCCGCCAGATCGCCATCGCTCGGATTCTGGTGCATATCGTCGCCAATCTGATCTCCGCACCGCAACTCCATTGCATCCCTCGCCGGTCTGTCCGCCAACACGTTGTTGCCACCTCCTCCGCCTCAAGCGCCACCACAGCCAACCCAAATTCCCTCCGCCACCGAGAGGAGAGCCTGTATTCTCGCAAGGGCAGCTTTATGTTGCATTATCAAGAGGGGTGTCAAGGAAAACGACAAAGATTTTGGCAAAGCCTTAAAAAAAAGGTGGACCCCACAAGAAGGAGCACAAGAAATATCGTGTATAAAGATGTTCTGGATTGGTGAACAATGACGGCACGTCAGGAGAAACATATACGGTACCACGTGATTGTCACTGGAGTAACTATTTATGTTTTTTTCTTCAACCTTAATAACATCCGTTCTATGTGGAAATGTAATGCCTTTAAAATATCAAAAGTTTAAAGTCAAAAAAA]


>consensus_9555#2 AGATNCTGAGCTAAATATATNCCAAAGCAAAATTCTACTTTCCCTATCAGTGTTGCTCTC CATCAGGATCGTCCTACTATCCGCTCTCTCCAAGGGATCCAGTCCAGATCGATCTCGCCC CTCATCTCCATCTCCACGCCGCCAGATCGCCATCGCTCGGATTCTGGTGCATATCGTCGC CAATCTGATCTCCGCACCGCAACTCCATTGCATCCCTCGCCGGTCTGTCCGCCAACACGT TGTTGCCACCTCCTCCGCCTCAAGCGCCACCACAGCCAACCCAAATTCCCTCCGCCACCG AGAGGAGAGCCTGTATTCTCGCAAGGGCAGCTTTATGTTGCATTATCAAGAGGGGTGTCA AGGAAAACGACAAAGATTTTGGCAAAGCCTTAAAAAAAAGGTGGACCCCACAAGAAGGAG CACAAGAAATATCGTGTATAAAGATGTTCTGGATTGGTGAACAATGACGGCACGTCAGGA GAAACATATACGGTACCACGTGATTGTCACTGGAGTAACTATTTATGTTTTTTTCTTCAA CCTTAATAACATCCGTTCTATGTGGAAATGTAATGCCTTTAAAATATCAAAAGTTTAAAG TCAAAAAAA



consensusID : consensus_9555#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 295
fasta sequence
                              [CNGGNACGCTTGGGCTCGCNCTCCCAANNCCNCTCCTNTTTTTTTAANCCGCATCCNTCCCCTNAGGCCGTAACGTTCCCTGCCACCGCCCTCATCCCTCCNTGCNGCCGCGCCCGCACCTNTACGGCTCTACCTTNGCCATCGCCATCATGCTGCACCACCTGGAGACCGGACGCCGATCAACGCCGGANGCCGACACGACCCTGGTTCAACGNCTCACCAACCGTNGACCCTNATGGCCTGACCTTATAAGGACGGCAACACGATNCTAATGGCCTGAACGCTNGTCCCTGCT]

[+] EMBL OSC334               [CNGGNACGCTTGGGCTCGCNCTCCCAANNCCNCTCCTNTTTTTTTAANCCGCATCCNTCCCCTNAGGCCGTAACGTTCCCTGCCACCGCCCTCATCCCTCCNTGCNGCCGCGCCCGCACCTNTACGGCTCTACCTTNGCCATCGCCATCATGCTGCACCACCTGGAGACCGGACGCCGATCAACGCCGGANGCCGACACGACCCTGGTTCAACGNCTCACCAACCGTNGACCCTNATGGCCTGACCTTATAAGGACGGCAACACGATNCTAATGGCCTGAACGCTNGTCCCTGCT]


>consensus_9555#3 CNGGNACGCTTGGGCTCGCNCTCCCAANNCCNCTCCTNTTTTTTTAANCCGCATCCNTCC CCTNAGGCCGTAACGTTCCCTGCCACCGCCCTCATCCCTCCNTGCNGCCGCGCCCGCACC TNTACGGCTCTACCTTNGCCATCGCCATCATGCTGCACCACCTGGAGACCGGACGCCGAT CAACGCCGGANGCCGACACGACCCTGGTTCAACGNCTCACCAACCGTNGACCCTNATGGC CTGACCTTATAAGGACGGCAACACGATNCTAATGGCCTGAACGCTNGTCCCTGCT



consensusID : consensus_9555#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 259
fasta sequence
                              [ATGCGTTCAGTTCCTTTGGCACATATACATACATATACAAGTGGGCACACCAAGATTCTATACTCACTCCAATGGTGGTGGCATTGAACCTACCACCCCTCCTACTTCGTTAATATTACAATAACAAATTGAATCTAAATGGATAGCCCTATTCAAGTCAAAAAAAATGGATAGCCCGGTATCCTATAGGAAAATTGTGGGTAACACATTTCATGTACAATATGATTGATTTATTTTAGAAAATATTTGTAAAAAAAAA]

[+] EMBL BI812370             [ATGCGTTCAGTTCCTTTGGCACATATACATACATATACAAGTGGGCACACCAAGATTCTATACTCACTCCAATGGTGGTGGCATTGAACCTACCACCCCTCCTACTTCGTTAATATTACAATAACAAATTGAATCTAAATGGATAGCCCTATTCAAGTCAAAAAAAATGGATAGCCCGGTATCCTATAGGAAAATTGTGGGTAACACATTTCATGTACAATATGATTGATTTATTTTAGAAAATATTTGTAAAAAAAAA]


>consensus_9555#4 ATGCGTTCAGTTCCTTTGGCACATATACATACATATACAAGTGGGCACACCAAGATTCTA TACTCACTCCAATGGTGGTGGCATTGAACCTACCACCCCTCCTACTTCGTTAATATTACA ATAACAAATTGAATCTAAATGGATAGCCCTATTCAAGTCAAAAAAAATGGATAGCCCGGT ATCCTATAGGAAAATTGTGGGTAACACATTTCATGTACAATATGATTGATTTATTTTAGA AAATATTTGTAAAAAAAAA



consensusID : consensus_9555#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 249
fasta sequence
                              [AAAGGCGAGAAATAGCATACAAGTGGCATATGACATGCTTCATTCCTTTGGCACATATACATAAATATACAATGTGGGCACACCAAGATTCTATACTCACTCCAATGGTGTGGCATTGAACCTACCACCTCTCCTAGTTCTTAATATTACATAACAACTAAATCTAAATGGATAGCCCTATTTCCTATAGGAAAAATGTGGGTAACACATTTCATGAAAAATATGATTTATTTATTTTAGAAAAAAAAA]

[+] EMBL CA757648             [AAAGGCGAGAAATAGCATACAAGTGGCATATGACATGCTTCATTCCTTTGGCACATATACATAAATATACAATGTGGGCACACCAAGATTCTATACTCACTCCAATGGTGTGGCATTGAACCTACCACCTCTCCTAGTTCTTAATATTACATAACAACTAAATCTAAATGGATAGCCCTATTTCCTATAGGAAAAATGTGGGTAACACATTTCATGAAAAATATGATTTATTTATTTTAGAAAAAAAAA]


>consensus_9555#5 AAAGGCGAGAAATAGCATACAAGTGGCATATGACATGCTTCATTCCTTTGGCACATATAC ATAAATATACAATGTGGGCACACCAAGATTCTATACTCACTCCAATGGTGTGGCATTGAA CCTACCACCTCTCCTAGTTCTTAATATTACATAACAACTAAATCTAAATGGATAGCCCTA TTTCCTATAGGAAAAATGTGGGTAACACATTTCATGAAAAATATGATTTATTTATTTTAG AAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9555#0      ------CCGCTCGTCT---CTCGCTCTCCCAGATCCGCTCCTCTCTCTCTGAACCGCATC 51
consensus_9555#3      -----CNGGNACGCTTGGGCTCGCNCTCCCAANNCCNCTCCTNTTTTTTTAANCCGCATC 55
consensus_9555#4      --------------------------------ATGCGTTCA-GTTCCTTTGGCACATATA 27
consensus_9555#5      AAAGGCGAGAAATAGCATACAAGTGGCATATGACATGCTTC-ATTCCTTTGGCACATATA 59
consensus_9555#2      ------AGATNCTGAGCTAAATATATNCCAAAGCAAAATTCTACTTTCCCTATCAGTGTT 54
consensus_9555#1      --AGNATATAGGGNCTATCCATTTTCTTGACTGAATAGGGCTATCCATTTAGATTCCAAT 58
                                                                                  

consensus_9555#0      CCTCCCCTGCCGCCGTAA-CGTTCCCTGCCACCGCCCTCATCCCTCCCTGCCGCCGCGCC 110
consensus_9555#3      CNTCCCCTNAGGCCGTAA-CGTTCCCTGCCACCGCCCTCATCCCTCCNTGCNGCCGCGCC 114
consensus_9555#4      CATACATATACAA-GTGGGCACACCAAGATTCTATACTCA--CTCCAATGGTGGTGGCAT 84
consensus_9555#5      CATAAATATACAATGTGGGCACACCAAGATTCTATACTCA--CTCCAATGGTG-TGGCAT 116
consensus_9555#2      GCTCTCCATCAGG-ATCGTCCTACTATCCGCTCTCTCCAAGGGATCCAGTCCAGATCGAT 113
consensus_9555#1      TGTTATGTAATATTAAGAAGTAGGAGGGGTGGTAGGTNCAA-TGCCACCACCATTNGAAG 117
                        *                                    *     *              

consensus_9555#0      CGCACCT-CTACGGCTCTACCTTCGCCGACACGACCCTGGATCAACGCCTCACCAACCGT 169
consensus_9555#3      CGCACCT-NTACGGCTCTACCTTNGCCATCGCCATCATGCTGCACCACCTGGAGACCGGA 173
consensus_9555#4      TGAACCTACCACCCCTCCTACTTCGTTAATATTACAATAACAAATTGAATCTAAATGGAT 144
consensus_9555#5      TGAACCTACCACCTCTCCTAGTTC-TTAATATTACA-TAACAA-CTAAATCTAAATGGAT 173
consensus_9555#2      CTCGCCCCTCATCTCCATCTCCACGCCGCCAGATCGCCATCGCTCGGATTCTGGTGCATA 173
consensus_9555#1      TGAGTATAGAATCTTGGTGTGCCCACTTGTATATGTATGTATATGTGCCAAAGGAATGAA 177
                                *                                                 

consensus_9555#0      CGACC-CTGATGGCCTGACCTTATAAGGACGCCAACACGATCCT-GATGGCCTGACCGCT 227
consensus_9555#3      CGCCG-ATCAACGCCGGANGCCGACACGACCCTGGTTCAAC----GNCTCACCAACCGTN 228
consensus_9555#4      AGCCCTATTCAAGTCAAAAAAAATGGATAGCCCGGTATCCT-----ATAGGAAAATTGTG 199
consensus_9555#5      AGCCCTATT----------------------------TCCT-----ATAGGAAAAATGTG 200
consensus_9555#2      TCGTCGCCAATCTGATCTCCGCACCGCAACTCCATTGCATCCCTCGCCGGTCTGTCCGCC 233
consensus_9555#1      GCATGTCATATGCCACTTGTATGCTA----TTTATCGCCTTT----GGAAGTTGAGCTTG 229
                                                                                  

consensus_9555#0      GTCCC-TGCTCGCCACCCATCTCACTGCCATCTCATTTCACGGTAAAAGGCTTGCTGTTG 286
consensus_9555#3      GACCC-TNATGGCCTGACCTTATAAGGACGGCA-ACACGATNCTAATGGCCTGAACGCTN 286
consensus_9555#4      GGTAA-CACATTTCATGTACAATATGATTGATTTATTTTAGAAAATATTTGTAAAAAAAA 258
consensus_9555#5      GGTAA-CACATTTCATGAAAAATATGATTTATTTATTTTAGAAAAAAAAA---------- 249
consensus_9555#2      AACACGTTGTTGCCACCTCCTCCGCCTCAAGCGC-CACCACAGCCAA--CCCAAATTCCC 290
consensus_9555#1      GAGATGCTGAGACCA--AAAAGGATGGCAAACA-AGGTGGGAAACATGGCCAAAATTATG 286
                                   *                                              

consensus_9555#0      CTGCCCACTGCATGCCCGCTGGCCGTAGGTAGATACTGAGCTAAATATATACCAAAGCAA 346
consensus_9555#3      GTCCCTGCT--------------------------------------------------- 295
consensus_9555#4      A----------------------------------------------------------- 259
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      TCCGCCACCGAGAGGAGAGCCTGTATTCTCGCAAGGGCAGCTTTATGTTGCATTATCAAG 350
consensus_9555#1      GCTGCTAGTGGCAGTAGGTCACGGTGGAAACCGAAGTAGTCCTTGATGAAGGCGGCCACA 346
                                                                                  

consensus_9555#0      AATTCTACCTTCCCTATCAGTGTTGCTCTCCATCAGGATCGTCCTACTATCCGCTCTCTC 406
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      AGGGGTGTCAAGGAAAACGACAAAGATTTTGGCAAAGCCTTAAAAAAAAGGTGGACCCCA 410
consensus_9555#1      GATTTAGTCTCTCCAAATACAGAAATCTCCTTCTCATGCTCATCCCCAAATTGTGTGGTG 406
                                                                                  

consensus_9555#0      CAAGGTGAGTCCAAGAAACCTTCTCTTGTGTCAATTCCATGAAGTTATATATCTCATCTC 466
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      CAAGAAGGAGCACAAGAAATATCGTGTATAAAGATGTTCTGGATTGGTGAACAATGACGG 470
consensus_9555#1      AAGAAAACGTTGAGTGTCCATGACAATGGGGAAGTGTAGTACAGCCATATCCACCATCTC 466
                                                                                  

consensus_9555#0      TCAAATATATGTGAATTGTGCTTGATTATGTCCCTCTGGTACTGTTTATTTGTATTTCTG 526
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      CACGTCAGGAGAAACATATACGGTACCACGTGATTGTCACTGGAGTAACTATTTATGTTT 530
consensus_9555#1      GGAATTTGTGGTGCAGGAACGATGAAGCCAAACATGAGGTTCTGCAGGGTGTAGAACATG 526
                                                                                  

consensus_9555#0      TGGTGCTAGAAACATCTGAATTATTGTGCACATGCTCTTATCCTCACTCTAAGTACTTTT 586
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      TTTTCTTCAACCTTAATAACATCCGTTCTATGTGGAAATGTAATGCCTTTAAAATATCAA 590
consensus_9555#1      GATGCCAATATAGATGCCACTTGGATATTTGGGGTGAGTGCCACTATCATCATTCCCAAG 586
                                                                                  

consensus_9555#0      TACAACATTTTCTGGTTTATTTGGTTACTGCCAAACTGAGATCAACTGATACATCTATTC 646
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      AAGTTTAAAGTCAAAAAAA----------------------------------------- 609
consensus_9555#1      TAGAGGAACACTACTACAGATCCGGGCTTCAGTGACGGGTCATCTGTGACGGGCCAACGC 646
                                                                                  

consensus_9555#0      CAGCAGATGAGAAGTCCACCTAATCAGATGGGCAGGGTTGGCTTGGTTCAATTTAAGAAA 706
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#1      AACTCGTCAAAGATGAGTCATCTCTGACGGGCCAAAAAAATATCCTCTTCAATATATGGC 706
                                                                                  

consensus_9555#0      TCTGAATTTGGCAAATTTAAGAAATTGGTTCAATTTACGAGCAGCATCATATTAGAAATA 766
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#1      TACCAGGGAGGACCCGTCACAGATGTGAAGTCATCTGTGACAGCTTGCACTTGAACCCAT 766
                                                                                  

consensus_9555#0      CTGACATACTCGACTGCAAAACTATTTTCAAGACTAAACTGAATTGGAGATTGATGTTCC 826
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#1      ------------------------------------------------------------
                                                                                  

consensus_9555#0      CAAGTACTGTGATAAGAATTGAGATAGTGTGAAGTGCAGGAAACCAAATAGCACTACTAC 886
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#1      ------------------------------------------------------------
                                                                                  

consensus_9555#0      GGATCCGGGCTTCAGTGACGGGTCATCTGTGACGGGCCAACACAACTCGTCAAAGATGAG 946
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#1      ------------------------------------------------------------
                                                                                  

consensus_9555#0      TCATCTCTGACGGGCCGAAAAAATATCCTCTTCAATATATTGCTACTAGGGAGGACCCAT 1006
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#1      ------------------------------------------------------------
                                                                                  

consensus_9555#0      CACAGATGTATCGTTTACTAATAATTAGCTCTTCAACAGAACCTGTTGCTCATATATTTG 1066
consensus_9555#3      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#1      ------------------------------------------------------------
                                                                                  

consensus_9555#0      ACATGGTTTTGTACAGTAGATAATAATCAAGATTCAGTAATGAGAGTATAGAAGAT 1122
consensus_9555#3      --------------------------------------------------------
consensus_9555#4      --------------------------------------------------------
consensus_9555#5      --------------------------------------------------------
consensus_9555#2      --------------------------------------------------------
consensus_9555#1      --------------------------------------------------------
                                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)