cluster # 9556

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Oryza sativa
cluster # 9556 cluster # 9556 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9556#0 length = 1734 sequences # 6
consensusID : consensus_9556#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1734
fasta sequence
                              [CCTTGAGAGACAGGGGGGCAAATATTCCGCCACTTGCCTTGATTCTGCTTGCTGCGGCTGCTGCCCCGTTGCTTGACGTCTACAGCACTGGGAGAGCACCAACCGCGCATCATACGCATCAAGAGCAGAGAGCGCGCAGAGGGAGAGGGGTGAGGAGGAGATGGCTGCGAAGTGGCAGGAGGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTCGCGGCCGCCGCGCTGCTGCTGGTCGTGTCGGCACGGAAGGTGGGGGAGACGTGCGCGGCGGACCGGAACTGCGACGCCGGGCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGCCCGCGCTGCACCCGCGTCACCCCCGTCGACCCGCAGACCAAGGCGCGGGACCTGCCGTTCAACCGGTACGCGTGGCTGACGACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGGACGGGGACGGCCATCGCCACGGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAACAACGGCGTGCGAGGACTGATGCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGCCACTCCTTCGGCGGCGCCTGCCAGAACTTCACCGCATTCGTGCCGGCGGTGGAGGTGCTGGGCGAGATCGAGCGGTTCTTGGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAGGACTACGTGGAGTCGCCCATGGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAGTACGTGTTCCCGGCGTGGCGGATGCCCAAGAGCGGCGGCGACTGGCCGCGGCTCAGCGACATGGTCCGCGACAACCACCGCCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCAGAGGGCATCCCCTACGAGTGGCACTACGTCGTCGAAAACCAGTATGGGACGAAGGGGATGATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTCCGATGAATGAGCACATCAAAAACACGTACTTCCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK070740             [CCTTGAGAGACAGGGGGGCAAATATTCCGCCACTTGCCTTGATTCTGCTTGCTGCGGCTGCTGCCCCGTTGCTTGACGTCTACAGCACTGGGAGAGCACCAACCGCGCATCATACGCATCAAGAGCAGAGAGCGCGCAGAGGGAGAGGGGTGAGGAGGAGATGGCTGCGAAGTGGCAGGAGGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTCGCGGCCGCCGCGCTGCTGCTGGTCGTGTCGGCACGGAAGGTGGGGGAGACGTGCGCGGCGGACCGGAACTGCGACGCCGGGCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGCCCGCGCTGCACCCGCGTCACCCCCGTCGACCCGCAGACCAAGGCGCGGGACCTGCCGTTCAACCGGTACGCGTGGCTGACGACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGGACGGGGACGGCCATCGCCACGGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAACAACGGCGTGCGAGGACTGATGCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGCCACTCCTTCGGCGGCGCCTGCCAGAACTTCACCGCATTCGTGCCGGCGGTGGAGGTGCTGGGCGAGATCGAGCGGTTCTTGGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAGGACTACGTGGAGTCGCCCATGGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAGTACGTGTTCCCGGCGTGGCGGATGCCCAAGAGCGGCGGCGACTGGCCGCGGCTCAGCGACATGGTCCGCGACAACCACCGCCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCAGAGGGCATCCCCTACGAGTGGCACTACGTCGTCGAAAACCAGTATGGGACGAAGGGGATGATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTCCGATGAATGAGCACATCAAAAACACG                                                                                           ]
[+] EMBL CB679874             [                              CACTTGCCTTGATTCTGCTTGCTGCGGCTGCTGCCCCGTTGCTTGACGTCTACAGCACTGGGAGAGCACCAACCGCGCATCATACGCATCAAGAGCAGAGAGCGCGCAGAGGGAGAGGGGTGAGGAGGAGATGGCTGCGAAGTGGCAGGAGGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTCGCGGCCGCCGCGCTGCTGCTGGTCGTGTCGGCACGGAAGGTGGGGGAGACGTGCGCGGCGGACCGGAACTGCGACGCCGGGCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGCCCGCGCTGCACCCGCGTCACCCCCGTCGACCCGCAGACCAAGGCGCGGGACCTGCCGTTCAACCGGTACGCGTGGCTGACGACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGGACGGGGACGGCCATCGCCACGGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAACAACGGCGTGCGAGGACTGATGCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGCCACTCCTTCGGCGGCGCCTGCCAGAACTTCACCGCATTCGTGCCGGCGGTGGAGGTGCTGGGCGAGATCGAGCGGTTCTTGGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAGGACTACGTGGAGTCGCCCATGGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAGTACGTGTTCCCGGCGTGGCGGATGCCCAAGAGCGGCGGCGACTGGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB678854             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGGCGGCGACTGGCCGCGGCTCAGCGACATGGTCCGCGACAACCACCGCCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCAGAGGGCATCCCCTACGAGTGGCACTACGTCGTCGAAAACCAGTATGGGACGAAGGGGATGATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCTACATg                                                                                                                                                                         ]
[-] EMBL CB679875             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAAGGGGATGATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACGGGATTGGTTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTAGGGTGAATGAGCACATCAAAAACACGTACTTCCA                                                                                   ]
[+] EMBL AK104956             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTACGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTCCGATGAA                                                                                                              ]
[+] EMBL AU094493             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTCCGATGAATGAGCACATCAAAAACACGTACTTCCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_9556#0
CCTTGAGAGACAGGGGGGCAAATATTCCGCCACTTGCCTTGATTCTGCTTGCTGCGGCTG
CTGCCCCGTTGCTTGACGTCTACAGCACTGGGAGAGCACCAACCGCGCATCATACGCATC
AAGAGCAGAGAGCGCGCAGAGGGAGAGGGGTGAGGAGGAGATGGCTGCGAAGTGGCAGGA
GGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTCGCGGCCGCCGCGCTGCTGCT
GGTCGTGTCGGCACGGAAGGTGGGGGAGACGTGCGCGGCGGACCGGAACTGCGACGCCGG
GCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGCCCGCGCTGCACCCGCGTCAC
CCCCGTCGACCCGCAGACCAAGGCGCGGGACCTGCCGTTCAACCGGTACGCGTGGCTGAC
GACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGGACGGGGACGGCCATCGCCAC
GGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAACAACGGCGTGCGAGGACTGAT
GCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGCCACTCCTTCGGCGGCGCCTG
CCAGAACTTCACCGCATTCGTGCCGGCGGTGGAGGTGCTGGGCGAGATCGAGCGGTTCTT
GGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAGGACTACGTGGAGTCGCCCAT
GGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAGTACGTGTTCCCGGCGTGGCG
GATGCCCAAGAGCGGCGGCGACTGGCCGCGGCTCAGCGACATGGTCCGCGACAACCACCG
CCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCAGAGGGCATCCCCTACGAGTG
GCACTACGTCGTCGAAAACCAGTATGGGACGAAGGGGATGATCAAGGGGAGGTGCCCGAA
CCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTT
CAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACAT
GCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTT
CTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACT
GGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACGACCGCTCG
GCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCG
GCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGC
TGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATC
CTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATC
CCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCT
ACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTCCGA
TGAATGAGCACATCAAAAACACGTACTTCCATCAAAAAAAAAAAAAAAAAAAAAAAAAAA
AANCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case