These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9556#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1734 fasta sequence [CCTTGAGAGACAGGGGGGCAAATATTCCGCCACTTGCCTTGATTCTGCTTGCTGCGGCTGCTGCCCCGTTGCTTGACGTCTACAGCACTGGGAGAGCACCAACCGCGCATCATACGCATCAAGAGCAGAGAGCGCGCAGAGGGAGAGGGGTGAGGAGGAGATGGCTGCGAAGTGGCAGGAGGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTCGCGGCCGCCGCGCTGCTGCTGGTCGTGTCGGCACGGAAGGTGGGGGAGACGTGCGCGGCGGACCGGAACTGCGACGCCGGGCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGCCCGCGCTGCACCCGCGTCACCCCCGTCGACCCGCAGACCAAGGCGCGGGACCTGCCGTTCAACCGGTACGCGTGGCTGACGACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGGACGGGGACGGCCATCGCCACGGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAACAACGGCGTGCGAGGACTGATGCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGCCACTCCTTCGGCGGCGCCTGCCAGAACTTCACCGCATTCGTGCCGGCGGTGGAGGTGCTGGGCGAGATCGAGCGGTTCTTGGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAGGACTACGTGGAGTCGCCCATGGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAGTACGTGTTCCCGGCGTGGCGGATGCCCAAGAGCGGCGGCGACTGGCCGCGGCTCAGCGACATGGTCCGCGACAACCACCGCCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCAGAGGGCATCCCCTACGAGTGGCACTACGTCGTCGAAAACCAGTATGGGACGAAGGGGATGATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTCCGATGAATGAGCACATCAAAAACACGTACTTCCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK070740 [CCTTGAGAGACAGGGGGGCAAATATTCCGCCACTTGCCTTGATTCTGCTTGCTGCGGCTGCTGCCCCGTTGCTTGACGTCTACAGCACTGGGAGAGCACCAACCGCGCATCATACGCATCAAGAGCAGAGAGCGCGCAGAGGGAGAGGGGTGAGGAGGAGATGGCTGCGAAGTGGCAGGAGGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTCGCGGCCGCCGCGCTGCTGCTGGTCGTGTCGGCACGGAAGGTGGGGGAGACGTGCGCGGCGGACCGGAACTGCGACGCCGGGCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGCCCGCGCTGCACCCGCGTCACCCCCGTCGACCCGCAGACCAAGGCGCGGGACCTGCCGTTCAACCGGTACGCGTGGCTGACGACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGGACGGGGACGGCCATCGCCACGGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAACAACGGCGTGCGAGGACTGATGCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGCCACTCCTTCGGCGGCGCCTGCCAGAACTTCACCGCATTCGTGCCGGCGGTGGAGGTGCTGGGCGAGATCGAGCGGTTCTTGGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAGGACTACGTGGAGTCGCCCATGGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAGTACGTGTTCCCGGCGTGGCGGATGCCCAAGAGCGGCGGCGACTGGCCGCGGCTCAGCGACATGGTCCGCGACAACCACCGCCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCAGAGGGCATCCCCTACGAGTGGCACTACGTCGTCGAAAACCAGTATGGGACGAAGGGGATGATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTCCGATGAATGAGCACATCAAAAACACG ] [+] EMBL CB679874 [ CACTTGCCTTGATTCTGCTTGCTGCGGCTGCTGCCCCGTTGCTTGACGTCTACAGCACTGGGAGAGCACCAACCGCGCATCATACGCATCAAGAGCAGAGAGCGCGCAGAGGGAGAGGGGTGAGGAGGAGATGGCTGCGAAGTGGCAGGAGGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTCGCGGCCGCCGCGCTGCTGCTGGTCGTGTCGGCACGGAAGGTGGGGGAGACGTGCGCGGCGGACCGGAACTGCGACGCCGGGCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGCCCGCGCTGCACCCGCGTCACCCCCGTCGACCCGCAGACCAAGGCGCGGGACCTGCCGTTCAACCGGTACGCGTGGCTGACGACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGGACGGGGACGGCCATCGCCACGGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAACAACGGCGTGCGAGGACTGATGCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGCCACTCCTTCGGCGGCGCCTGCCAGAACTTCACCGCATTCGTGCCGGCGGTGGAGGTGCTGGGCGAGATCGAGCGGTTCTTGGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAGGACTACGTGGAGTCGCCCATGGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAGTACGTGTTCCCGGCGTGGCGGATGCCCAAGAGCGGCGGCGACTGGCCG ] [-] EMBL CB678854 [ CGGCGGCGACTGGCCGCGGCTCAGCGACATGGTCCGCGACAACCACCGCCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCAGAGGGCATCCCCTACGAGTGGCACTACGTCGTCGAAAACCAGTATGGGACGAAGGGGATGATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCTACATg ] [-] EMBL CB679875 [ GAAGGGGATGATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACGGGATTGGTTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTAGGGTGAATGAGCACATCAAAAACACGTACTTCCA ] [+] EMBL AK104956 [ GCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTACGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTCCGATGAA ] [+] EMBL AU094493 [ CGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACCACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAGATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGGTTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCAAGCTCCGATGAATGAGCACATCAAAAACACGTACTTCCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||