These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9563#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1807 fasta sequence [CACCTCAAGAGGGGAAGCGGGAGTGGCGGCGGCGGCGGCGGCGTCAACCAGTTCGTCTACAACTGCCTGCTGGGCGCGGTCAAGAACAGTGGGGAATTTGGGAGGATCCACGATGTGCTTGCAGACATGGAGGCACAGGGGGTTCCCCCAAACATTGTGACATTCAACACTCTGATGTCAATCTATGTCGAACAAGGCAAGATTGATGAGGTCTTCAGGGTGTTTGACACCATCGAGGGCAGTGGCCTGGTGCCCACCGCGGCGACATACTCGACAGTGATGTCGGCCTACAAGAAGGCTGGCGATGCATTCGCGGCACTCAAGTTCATCACCAAGCTAAGGGGGATGTACAACAAGGGTGAATTGGCGGTGAATCATGAAGATTGGGACCGAGAATTTGTCAAGTTTGAGAAGCTGACTGTCCGTGTCTGCTATATGGCGATGCGGCGGTCTCTTGTGGGTGGTGAGAATCCAGTAGGTGAGGTGCTGAAAGTTCTTCTTGGCATGGATGAAGCTGGGGTGAAGCCAGACAGGAGAGATTACGAGCGGCTTGTGTGGGCATGTACAGGTGAGGAGCATTACACCATTGCCAAGGAGCTGTACCAAAGGATCCGTGAGCGTGGTGATGGCGTGATCAGCTTATCTGTGTGCAATCATCTGATTTGGCTGATGGGCAAGGCTAAGAAGTGGTGGGCAGCTCTTGAGATTTATGAGGATTTGTTGGACAAAGGCCCCAAACCGAATAACTTGTCGTATGAGCTCATCATGTCACATTTCAATATTCTACTCAATGCTGCAAAGAGAAGGGGCATTTGGAGGTGGGGTGTAAGGCTGCTTGATAAGATGCAACAGAAGGGCTTGAAGCCTGGAAGCAGAGAGTGGAATGCCGTCCTTCTTGCGTGTTCTAGAGCAGCTGAAACATCTGCTGCAGTGGATATATTTAAGAGAATGATAGATCAAGGGTTGACACCGGATGTAGTTTCTTACGGAGCGCTGCTGAGTGCGCTTGAGAAGGGAAAGCTGTATGATGAGGCACTCCGAGTTTGGGAACACATGTGCAAGGTAGGCGTTAAGCCGAA-CCTACATGCATATACAATCTTAGTATCAATTTACATT-GGCAAGGGGAACCATGCTATGGTAGATTCTGTTCTTCGTGGTATGCTGTCAGCAAAGATAGAACCAACTGTTGTTACGTTCAATGCGATAATCAGCGCATGCGTGAGAAACAATAAGGGTGGCTCTGCTTTTGAATGGTTCCATAGGATGAAAGTGCAGAACATTGAGCCAAATGAAATTACATATCA-GATGTTGATTGAAGCTCTTGTACAAGATGGTAAACCCAGGCTTGCCTATGAGATGTACATGAGGGCTTGCAACCAAGGGCTTGAGCTTCCTGCAAAAT-CATACGACACTGTAATGGAGGCATGCCAAGATTATGGTTCCCTCATAGATCTAAATTCTTTGGGTCCTCGGCCTGTTAAGAAAGTGGAACCCATCAGGATAGAGAACAAGTTTTCGAGTAGTTATTATGTTGGGGATCTTCCCAGCAGCACAAAACATTTTGGTAGCACTGGAACATCTAGTTTATATAGATACAGAACGGAAAGGTGGATCATGTAGCATTCGGCCCCCTCTTTTTTCTGAACACTTCAAACTCACTCCAAGTCTCCAACATTGAGAACACACTGATATTTGTTTGTAAGTTGCCTAACTTGTAATTTGTAAACATTCAATCA-TTATACAGTAGTGAATTTGTTATTTGCTTTATACGGAGTAGAAAGTAGAAGGAGATTGCCTCATGGACTTA] [+] EMBL AK106931 [CACCTCAAGAGGGGAAGCGGGAGTGGCGGCGGCGGCGGCGGCGTCAACCAGTTCGTCTACAACTGCCTGCTGGGCGCGGTCAAGAACAGTGGGGAATTTGGGAGGATCCACGATGTGCTTGCAGACATGGAGGCACAGGGGGTTCCCCCAAACATTGTGACATTCAACACTCTGATGTCAATCTATGTCGAACAAGGCAAGATTGATGAGGTCTTCAGGGTGTTTGACACCATCGAGGGCAGTGGCCTGGTGCCCACCGCGGCGACATACTCGACAGTGATGTCGGCCTACAAGAAGGCTGGCGATGCATTCGCGGCACTCAAGTTCATCACCAAGCTAAGGGGGATGTACAACAAGGGTGAATTGGCGGTGAATCATGAAGATTGGGACCGAGAATTTGTCAAGTTTGAGAAGCTGACTGTCCGTGTCTGCTATATGGCGATGCGGCGGTCTCTTGTGGGTGGTGAGAATCCAGTAGGTGAGGTGCTGAAAGTTCTTCTTGGCATGGATGAAGCTGGGGTGAAGCCAGACAGGAGAGATTACGAGCGGCTTGTGTGGGCATGTACAGGTGAGGAGCATTACACCATTGCCAAGGAGCTGTACCAAAGGATCCGTGAGCGTGGTGATGGCGTGATCAGCTTATCTGTGTGCAATCATCTGATTTGGCTGATGGGCAAGGCTAAGAAGTGGTGGGCAGCTCTTGAGATTTATGAGGATTTGTTGGACAAAGGCCCCAAACCGAATAACTTGTCGTATGAGCTCATCATGTCACATTTCAATATTCTACTCAATGCTGCAAAGAGAAGGGGCATTTGGAGGTGGGGTGTAAGGCTGCTTGATAAGATGCAACAGAAGGGCTTGAAGCCTGGAAGCAGAGAGTGGAGTGCCGTCCTTCTTGCGTGTTCTAGAGCAGCTGAAACATCTGCTGCAGTGGATATATTTAAGAGAATGATAGATCAAGGGTTGACACCGGATGTAGTTTCTTACGGAGCGCTGCTGAGTGCGCTTGAGAAGGGAAAGCTGTATGATGAGGCACTCCGAGTTTGGGAACACATGTGCAAGGTAGGCGTTAAGCCGAA CCTACATGCATATACAATCTTAGTATCAATTTACATT GGCAAGGGGAACCATGCTATGGTAGATTCTGTTCTTCGTGGTATGCTGTCAGCAAAGATAGAACCAACTGTTGTTACGTTCAATGCGATAATCAGCGCATGCGTGAGAAACAATAAGGGTGGCTCTGCTTTTGAATGGTTCCATAGGATGAAAGTGCAGAACATTGAGCCAAATGAAATTACATATCA GATGTTGATTGAAGCTCTTGTACAAGATGGTAAACCCAGGCTTGCCTATGAGATGTACATGAGGGCTTGCAACCAAGGGCTTGAGCTTCCTGCAAAAT CATACGACACTGTAATGGAGGCATGCCAAGATTATGGTTCCCTCATAGATCTAAATTCTTTGGGTCCTCGGCCTGTTAAGAAAGTGGAACCCATCAGGATAGAGAACAAGTTTTCGAGTAGTTATTATGTTGGGGATCTT CCAGCAGCACAAAACATTTTGGTAGCACTGGAACATCTAGTTTATATAGATACAGAACGGAAAGGTGGATCATGTAGCATTCGGCCCCCTCTTTTTTCTGAACACTTCAAACTCACTCCAAGTCTCCAACATTGAGAACACACTGATATTTGTTTGTAAGTTGCCTAACTTGTAATTTGTAAACATTCAATCA TTATACAGTAGTGAATTTGTTATTTGCTTTATACGGAGTAGAAAGTAGAAGGAGATTGCCTCATGGACTTA] [+] EMBL AK099847 [CACCTCAAGAGGGGAAGCGGGAGTGGCGGCGGCGGCGGCGGCGTCAACCAGTTCGTCTACAACTGCCTGCTGGGCGCGGTCAAGAACAGTGGGGAATTTGGGAGGATCCACGATGTGCTTGCAGACATGGAGGCACAGGGGGTTCCCCCAAACATTGTGACATTCAACACTCTGATGTCAATCTATGTCGAACAAGGCAAGATTGATGAGGTCTTCAGGGTGTTTGACACCATCGAGGGCAGTGGCCTGGTGCCCACCGCGGCGACATACTCGACAGTGATGTCGGCCTACAAGAAGGCTGGCGATGCATTCGCGGCACTCAAGTTCATCACCAAGCTAAGGGAGATGTACAACAAGGGTGAATTGGCGGTGAATCATGAAGATTGGGACCGAGAATTTGTCAAGTTTGAGAAGCTGACTGTCCGTGTCTGCTATATGGCGATGCGGCGGTCTCTTGTGGGTGGTGAGAATCCAGTAGGTGAGGTGCTGAAAGTTCTTCTTGGCATGGATGAAGCTGGGGTGAAGCCAGACAGGAGAGATTACGAGCGGCTTGTGTGGGCATGTACAGGTGAGGAGCATTACACCATTGCCAAGGAGCTGTACCAAAGGATCCGTGAGCGTGGTGATGGCGTGATCAGCTTATCTGTGTGCAATCATCTGATTTGGCTGATGGGCAAGGCTAAGAAGTGGTGGGCAGCTCTTGAGATTTATGAGGATTTGTTGGACAAAGGCCCCAAACCGAATAACTTGTCGTATGAGCTCATCATGTCACATTTCAATATTCTACTCAATGCTGCAAAGAGAAGGGGCATTTGGAGGTGGGGTGTAAGGCTGCTTGATAAGATGCAACAGAAGGGCTTGAAGCCTGGAAGCAGAGAGTGGAATGCCGTCCTTCTTGCGTGTTCTAGAGCAGCTGAAACATCTGCTGCAGTGGATATATTTAAGAGAATGATAGATCAAGGGTTGACACCGGATGTAGTTTCTTACGGAGCGCTGCTGAGTGCGCTTGAGAAGGGAAAGCTGTATGATGAGGCACTCCGAGTTTGGGAACACATGTGCAAGGTAGGCGTTAAGCCGAA CCTACATGCATATACAATCTTAGTATCAATTTACATT GGCAAGGGGAACCATGCTATGGTAGATTCTGTTCTTCGTGGTATGCTGTCAGCAAAGATAGAACCAACTGTTGTTACGTTCAATGCGATAATCAGCGCATGCGTGAGAAACAATAAGGGTGGCTCTGCTTTTGAATGGTTCCATAGGATGAAAGTGCAGAACATTGAGCCAAATGAAATTACATATCA GATGTTGATTGAAGCTCTTGTACAAGATGGTAAACCCAGGCTTGCCTATGAGATGTACATGAGGGCTTGCAACCAAGGGCTTGAGCTTCCTGCAAAAT CATACGACACTGTAATGGAGGCATGCCAAGATTATGGTTCCCTCATAGATCTAAATTCTTTGGATCCTCGGCCTGTTAAGAAAGTGGAACCCATCAGGATAGAGAACAAGTTTTCGAGTAGTTATTATGTTGGGGATCTTCCCAGCAGCACAAAACATTTTGGTAGCACTGGAACATCTAGTTTATATAGATACAGAACGGAAAGGTGGATCATGTAGCATTCGGCCCCCTCTTTTTTCTGAACACTTCAAACTCACTCCAAGTCTCCAACATTGAGAACACACTGATATTTGTTTGTAAGTTGCCTAACTTGTAATTTGTAAACATTCAATCA TTATACAGTAGTGAATTTGTTATTTGCTTTATACGGAGTAGAAAGTAGAAGG ] [+] EMBL OSS10411A [ AGGTGGGGTGTAAGGCTGCTTGATAAGATGCAACAGAAGGGCTTGAAGCCTGGAAGCAGAGAGTGGAATGCCGTCCTTCTTGCGTGTTCTAGAGCAGCTGAAACATCTGCTGCAGTGGATATATTTAAGAGAATGATAGATCAAGGGTTGACACCGGATGTAGTTTCTTACGGAGCGCTGCTGAGTGCGCTTNAGAAGGGAAAGCTGTATGATGAGGCACTCCGAGTTTGGGAACACATGTNCAAGGTAGGCGTTAAGCCGAACCCTACATGCATATACAATCTTAGTATCAATTTACATTGGGCAAGGGG ACCATGCTA ] [+] EMBL CA767556 [ TGTGCAAGGTAGGCGTTAAGCC AA CCTACATGCATATACAATCTTAGTATCAATTTACATT GGCAAGGGGAACCATGCTATGGTAGATTCTGTTCTTCGTGGTATGCTGTCAGCAAAGGTAGAACCAACTGTTGTAACGTTCAATGCGATAATCAGTGCATGCGTGAGAAACAATAAGGGTGGCTCTGCTTTTGAATGGTTCCATAGGATGAAAGTGCAGAACATTGAGCCAAATGAAATTACATATCANGATGTTGATTGAAGCTCTTGTACAAGATGGTAAATCCAGGCTTGCCTATGAGATGTACATGAGGGCTTGCAACCAAGGGCTTGAGCTTCCTGCAAAAT CATATGACACTGTAATGGAGGCATGCCAAGATTATGGTTCCCTCATAGATCTAAATTCTTTGGGTCCTCGGCCTGTTAAGAAAGTGGAACCCATCAGGATAGAGAACAAGTTTTCAAGTAGTTATTATGTTGGGGATCTTCCCAGCAGCACAAAACATTTTGGTAGCACTGGAACATCTAATTTATATAGATACAGAACGGAAAGGTGGATCATGTAGCATTCGGCCCCCTCTTTTTTCTGAACACTTCAAACTCACTCCAAGTCTCCAACATTGAGAACACACTGATATTTGTTTGTAAGTTGCCTAAC TTGTAAACATTCAATCATTTATACAGTAGTGAATTTGgt ] [+] EMBL AU095713 [ AAATGAAATTACATATCA GATGTTGATTGAAGCTCTTGTACAAGATGGTAAACCCAGGCTTGCCTATGAGATGTACATGAGGGCTTGCAACCAAGGGCTTGAGCTTCCTGCAAAATCCATACGACACTGTAATGGAGGCATGCCAAGATTATGGTNCCCTCATAGATCTAAATTCTTTGGGTCCTCGGCCTGTTAAGAAAGTGGAACCCATCAGGATAGAGAACAAGTTTTCGAGTAGTTATTATGTTGGGGATCTTCCCAGCAGCACAAAACATTTTGGTAGCACTGGAACATCTAGTTTATATAGATACAGAACGGAAAGGTGGATCATGTAGCATTCGGCCCCCTCTTTTTTCTGAACACTTCAAACTCACTCCAAGTCTCCAACATTGAGAACACACTGATATTTGTTTGTAAGTTGCCTAACTTGTAATTTGTAAACATTCAATCA TTATACAGTAGTGAATTTGTTATTTGCTTTAaaaaa ] [+] EMBL BI809381 [ GATGTTGATTGAAGCTCTTGTACAAGATGGTAAACCCAGGCTTGCCTATGAGATGTACATGAGGGCTTGCAACCAAGGGCTTGAGCTTCCTGC AAAT CATATGACACTGTAATGGAGGCATGCCAAGATTATGGTTCCCTCATAGATCTAAATTCTTTGGGTCCTCGGCCTGTTAAGAAAGTGGAACCCATCAGGATAGAGAACAAGTTTTCAAGTAGTTATTATGTTGGGGATCTTCCCAGCAGCACAAAACATTTTGGTAGCACTGGAACATCTAATTTATATAGATACAGAACGGAAAGGTGGATCATGTAGCATTCGGCCCCCTCTTTTTTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||