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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9572#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2177 fasta sequence
[GTCAGCTAGCCGCCGGCTTCAGGCTAAGCCCTAAACCCGCGTCTCCCCCCTCTCCGAGTCTCCGGCGCGGAGTATCCGTCCGCCCCGCGCGCAGGTGCAGCTCGCCGGCTGGGGCTCGGAGCCAAGAGCATCCCCTCGGGAATTTGTGATATTAGTTGGAAGGAAGGATATTTGGCTGTGGTAAAACTGGTATTGATAAATAGAGCACAGATGCGGCTAACTGTTGGCCAAGTGCATCGACATGTACTTGCATTGGCATCTTCTCGGTCATGCTTCGTCCTTGGTGATCACCTTCCATTCAGAATGCTTTCACTTCCACGAGTGGTAAGATTTCACCAAACCGCTTGGCATGATATTCAAACTGTGGAAGATAAGAGTGGTCCGCTAACTCTAGCTAGTCTTGAAGTGCAAAACAAAGTTGAATATGTTAAGAAAGAAAGAGCAACACGTACTGGAGGCATAAAGCCATCTTCAAGGGCTTCAGCTCTTAATATGAAACCAAAAGTTTCTTCATTCAATGCCAAACCAGTAAAGAGTGCCTTGCCGAAATCAGCAGTACTGAAGAAGACTCTGAAGATAGATGAATCTCTTTTTTCTGCAAAATCATTTGAAGAACTCGGTTTGCCACCTTTGCTTATAGATAGGTTGAACAAGGAAGGTCTTACTGCTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAAAGCACGATGCAGTTATCCAATCATATACTGGCTCAGGGAAGACACTTGCTTATCTTCTCCCTATTCTTTCTGAAATAGGCCCTCTGAAGAGGCCTACAGAACAAGACAGTTCTGATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCTAGAGAATTAGGAATGCAAATAGTGCGAGAAGTGGAGAAGATATTGGGCCCTAATGATAAGAGACTTGTCCAACAACTTGTTGGTGGTGCTAATCGTTCGAGGCAAGAAGAAGCATTGAAGAAGAACAAGCCAATTATTGTTGTTGGGACACCTGGTCGTATTTCTGAAATTTCAGCAGCCGGCAAGCTACACACCCACAGTTGCCGCTTTCTTGTACTGGATGAAGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCGGGTACTTCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCCGCAACGATACCATTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTGTTCCACTTGAGTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGCCAGATGCCAACTCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTGACAGCTTACCACCATCTTTGGAACATTACTATTGTACATCCAAGGCTCAACACAAAGTGGACACTTTAAGGAGATGTATCCATGCTCTGGAGGCTCAGACAGTAATTGCATTTATGAACAACACCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATCTGGATCTTCCAACA-GACTCAACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTCTAGGGCGGAAAGGAACTGTGGTCACAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATAAGGAGGAAGATGTAGAGTAAACTATGCATTGTTCAAATGAATTCATCGAATGGCATTTTCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTTTTTTGGTCGATGCAAAGATTCAGATAGAAGGAATGGTTGTTATCCTGGAAACTTTTTCCTCACGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCACCTTCCTATGGAGATGTACTGTAATGTGTAAAATGACTCCAAGAAATTACAGTATATGCT]
[+] EMBL AK100670 [GTCAGCTAGCCGCCGGCTTCAGGCTAAGCCCTAAACCCGCGTCTCCCCCCTCTCCGAGTCTCCGGCGCGGAGTATCCGTCCGCCCCGCGCGCAGGTGCAGCTCGCCGGCTGGGGCTCGGAGCCAAGAGCATCCCCTCGGGAATTTGTGATATTAGTTGGAAGGAAGGATATTTGGCTGTGGTAAAACTGGTATTGATAAATAGAGCACAGATGCGGCTAACTGTTGGCCAAGTGCATCGACATGTACTTGCATTGGCATCTTCTCGGTCATGCTTCGTCCTTGGTGATCACCTTCCATTCAGAATGCTTTCACTTCCACGAGTGGTAAGATTTCACCAAACCGCTTGGCATGATATTCAAACTGTGGAAGATAAGAGTGGTCCGCTAACTCTAGCTAGTCTTGAAGTGCAAAACAAAGTTGAATATGTTAAGAAAGAAAGAGCAACACGTACTGGAGGCATAAAGCCATCTTCAAGGGCTTCAGCTCTTAATATGAAACCAAAAGTTTCTTCATTCAATGCCAAACCAGTAAAGAGTGCCTTGCCGAAATCAGCAGTACTGAAGAAGACTCTGAAGATAGATGAATCTCTTTTTTCTGCAAAATCATTTGAAGAACTCGGTTTGCCACCTTTGCTTATAGATAGGTTGAACAAGGAAGGTCTTACTGCTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAAAGCACGATGCAGTTATCCAATCATATACTGGCTCAGGGAAGACACTTGCTTATCTTCTCCCTATTCTTTCTGAAATAGGCCCTCTGAAGAGGCCTACAGAACAAGACAGTTCTGATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCTAGAGAATTAGGAATGCAAATAGTGCGAGAAGTGGAGAAGATATTGGGCCCTAATGATAAGAGACTTGTCCAACAACTTGTTGGTGGTGCTAATCGTTCGAGGCAAGAAGAAGCATTGAAGAAGAACAAGCCAATTATTGTTGTTGGGACACCTGGTCGTATTTCTGAAATTTCAGCAGCCGGCAAGCTACACACCCACAGTTGCCGCTTTCTTGTACTGGATGAAGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCGGGTACTTCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCCGCAACGATACCATTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTGTTCCACTTGAGTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGCCAGATGCCAACTCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTGACAGCTTACCACCATCTTTGGAACATTACTATTGTACATCCAAGGCTCAACACAAAGTGGACACTTTAAGGAGATGTATCCATGCTCTGGAGGCTCAGACAGTAATTGCATTTATGAACAACACCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATCTGGATCTTCCAACA GACTCAACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTCTAGGGCGGAAAGGAACTGTGGTCACAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATAAGGAGGAAGATGTAGAGTAAACTATGCATTGTTCAAATGAATTCATCGAATGGCATTTTCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTTTTTTGGTCGATGCAAAGATTCAGATAGAAGGAATGGTTGTTATCCTGGAAACTTTTTCCTCACGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCACCTTCCTATGGAGATGTACTGTAATGTGTAAAATGACTCCAAGAAATTACAGTATATGCT]
[+] EMBL CA764556 [ ACAAGCCAATTATTGTTGTTGGGACACCTGGTCGTATTTCTGAAATTTCAGCAGCCGGCAAGCTACACACCCACAGTTGCCGCTTTCTTGTACTGGATGAAGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCGGGTACTTCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCCGCAACGATACCATTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTGTTCCACTTGAGTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGCCAGATGCCAACTCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTGACAGCTTACCACCATCTTTGGAACATTACTATTGTACATCCAAGGCTCAACACAAAGTGGACACTTTAAGGAGATGTATCCATGCTCTGGAGGCTCAGACAGTAATTGCATTTATGAACAACACCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGNTCAAGGATGGTGAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGNGATTAATCTGGATCTTCCAACAGGACTCGACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTCTAGGGCGGNAAGGNAC ]
consensusID : consensus_9572#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2101 fasta sequence
[AGGCTAACTAAGCCCTAAACCCGCGTGTCTCCTCCCTCCTCGCGAGTTCGCCGGCCGCCTCGCCTGCGTCGATCTCCAGTGGGCAGCGGCGCCGGCGTCTGCTGCTTCCGCCGCATCCTCGCCCGCTGCCAAGAGCACCCCCGGTGAATTTGCGAGATCAGTTGGGAGTAAGGACATTTCGGCTGCTGTAAAATTGGTTTTCATAAGCAGAGCAGCAGATGAGGCTAACTGTTGGCCAAGTGCATCGACATGTGCTTGCATTGGCATCTTCGCGATCATGCTTCGTCCTCGGTGACAACCTCCCATTGAGAATGCTTTCATTACCACGAGCGGTTAGATTTCACCAGACCGCTTGGCTTGGTACTGAAACAGTACAAGATAAGAGTGCTTCACTAACTCTAGCTAGTCTTGAAGGGCAAAACAAAGTTGAATATGGTAAGAAAGAAAAAGCAACACGCATTGGAGGTCCAAAGCCGTCTTCAAGGGCTTCTGCTCTTAAGGTGAAACCAAAAGTTTCTTCATTTAATTCCAAACCAGCAAAGAGCACCTTACCGAAATCAGCAGTAGTGAAGAAGACTCTGAAGATAGATGAATCTCTTTTCTCTGCAAAATCATTTGAAGAGCTTGGTTTGCCGCCTTTGCTTATAGATCGGTTGAACAAGGAAGGTCTAAGTACTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAAAGCATGATGCAGTTATCCAGTCATATACGGGCTCAGGGAAGACACTCGCTTACCTTCTCCCTATTCTTTCTGAAATAGGCCCCCTAAAGAGGCCTACAGAACAAGATGGTTCTGATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCCAGAGAATTAGGAATGCAGATAGTGCGAGAAGTGGAGAAGATTTTGGGCCCTAATGATAAGAGGCTTGTCCAACAACTTGTTGGTGGGGCTAATCGTTCGAGGCAGGAAGAAGCATTGAAAAAGAACAAGCCACTTATTGTTGTGGGAACACCTGGTCGTATTTCTGAAATTTCAGCAGGGGGCAAGCTACACACCCATGGTTGCCGCTTTCTTGTACTGGATGAGGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCTGGTACTTCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCTGCAACAATACCGTTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTGTTCCACTTGATTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGACAGATGCCAACCCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTAACAGCTTACCACCATCTTTGGAACATTACTATTGTATATCCAAGGCTCAACACAAAGTTGACACTTTGAGGAGATGTATCCATGCTCTGGAAGCTCAGACAGTTATTGCATTTATGAACAACACCAAGCCATTGAAAGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAGCTACATGGAGATCTTGGAAAGCTTGCAAGATCAACTGTGCTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGACGTGCCAGAATGTGATCTTGTGATTAATCTGGATCTTCCAACAGACTCTACACACTATGCCCACAGAGCTGGCCGAACGGGCCGTCTAGGGCGGAAAGGAACTGTGGTCACAATATGCGAAGAAACTGAAACATTTGTTGTAAGAAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGCGAATTCACGGAAGGCAAGTTGCTTGTTCATAATGAGGAAGATGTAGAATAAGCTCTGCATTGTCGAAATGACATTTAATGTCTTGAAGTGTTATTTGTGTATGGGCATTTCTCATAGATTGTATTATCTTAAAATGTTATCAACCGATGTTTTTTTGCTCGATACAAATATTC-AGATAAATGGGAATAGTTGTCTTTCCTGGGAAAAAAAAA]
[+] EMBL AK071610 [AGGCTAACTAAGCCCTAAACCCGCGTGTCTCCTCCCTCCTCGCGAGTTCGCCGGCCGCCTCGCCTGCGTCGATCTCCAGTGGGCAGCGGCGCCGGCGTCTGCTGCTTCCGCCGCATCCTCGCCCGCTGCCAAGAGCACCCCCGGTGAATTTGCGAGATCAGTTGGGAGTAAGGACATTTCGGCTGCTGTAAAATTGGTTTTCATAAGCAGAGCAGCAGATGAGGCTAACTGTTGGCCAAGTGCATCGACATGTGCTTGCATTGGCATCTTCGCGATCATGCTTCGTCCTCGGTGACAACCTCCCATTGAGAATGCTTTCATTACCACGAGCGGTTAGATTTCACCAGACCGCTTGGCTTGGTACTGAAACAGTACAAGATAAGAGTGCTTCACTAACTCTAGCTAGTCTTGAAGGGCAAAACAAAGTTGAATATGGTAAGAAAGAAAAAGCAACACGCATTGGAGGTCCAAAGCCGTCTTCAAGGGCTTCTGCTCTTAAGGTGAAACCAAAAGTTTCTTCATTTAATTCCAAACCAGCAAAGAGCACCTTACCGAAATCAGCAGTAGTGAAGAAGACTCTGAAGATAGATGAATCTCTTTTCTCTGCAAAATCATTTGAAGAGCTTGGTTTGCCGCCTTTGCTTATAGATCGGTTGAACAAGGAAGGTCTAAGTACTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAAAGCATGATGCAGTTATCCAGTCATATACGGGCTCAGGGAAGACACTCGCTTACCTTCTCCCTATTCTTTCTGAAATAGGCCCCCTAAAGAGGCCTACAGAACAAGATGGTTCTGATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCCAGAGAATTAGGAATGCAGATAGTGCGAGAAGTGGAGAAGATTTTGGGCCCTAATGATAAGAGGCTTGTCCAACAACTTGTTGGTGGGGCTAATCGTTCGAGGCAGGAAGAAGCATTGAAAAAGAACAAGCCACTTATTGTTGTGGGAACACCTGGTCGTATTTCTGAAATTTCAGCAGGGGGCAAGCTACACACCCATGGTTGCCGCTTTCTTGTACTGGATGAGGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCTGGTACTTCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCTGCAACAATACCGTTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTGTTCCACTTGATTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGACAGATGCCAACCCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTAACAGCTTACCACCATCTTTGGAACATTACTATTGTATATCCAAGGCTCAACACAAAGTTGACACTTTGAGGAGATGTATCCATGCTCTGGAAGCTCAGACAGTTATTGCATTTATGAACAACACCAAGCCATTGAAAGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAGCTACATGGAGATCTTGGAAAGCTTGCAAGATCAACTGTGCTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGACGTGCCAGAATGTGATCTTGTGATTAATCTGGATCTTCCAACAGACTCTACACACTATGCCCACAGAGCTGGCCGAACGGGCCGTCTAGGGCGGAAAGGAACTGTGGTCACAATATGCGAAGAAACTGAAACATTTGTTGTAAGAAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGCGAATTCACGGAAGGCAAGTTGCTTGTTCATAATGAGGAAGATGTAGAATAAGCTCTGCATTGTCGAAATGACATTTAATGTCTTGAAGTGTTATTTGTGTATGGGCATTTCTCATAGATTGTATTATCTTAAAATGTTATCAACCGATGTTTTTTTGCTCGATACAAATATTC AGATAAATGGGAATAGTTGT ]
[+] EMBL OSC111871 [ TGGCCAAGTGCATCGACATGTGCTTGCATTGGCATCTTCGCGATCATGCTTCGTCCTCGGTGACAACCTCCCATTGAGAATGCTTTCATTACCACGAGCGGTTAGATTTCACCAGACCGCTTGGCTTGGTACTGAAACAGTACAAGATAAGAGTGCTTCACTAACTCTAGCTAGTCTTGAAGGGCAAAACAAAGTTGAATATGGTAAGAAAGAAAAAGCAACACGCATTGGAGGTCCAAAGCCGTCTTCAAGGGCTTCTGCTCTTAAGGTG AACCAAAAGTTTCTTCATTTAATTCCAAACCAGCAAAGAGCACCTTACCGAAATCAGCAGTAGTtagg ]
[+] EMBL AU100653 [ TANGAAAAATGCGCAAGCAATTAGCTGTACCCANCAAGCCATGCGAATTCACGGAAGGCAAGTTGCTTGTTCATAATGAGGAAGATGTAGAATAAGCTCTGCATTGTCGAAATGACATTTAATGTCTTGAAGTGTTATTTGTGTATGGGCATTTCTCATAGATTGTATTATCTTACAATGTTATCAACCGATGTTTTTTTGCTCGATACAAATATTCAAGATAAATGGGAATAGTTGTCTTTCCTGGGAAAAAAAAA]
consensusID : consensus_9572#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence
[CCTTTAGGGAGATGTTCCCCTTTTCCGGAGGCTCAACCAGTAATTGCATTTATGACCACCCCCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTAAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATTTGGATCTTCCAACAGACTCGACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTTTAGGGCGGAAAGGAACTGTGGTCCCAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATAAGGAGGAAGATGTAGAGTAAACTTTGCATTGTTCAAATGAATTCATCGAATGGCATTTTCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTTTTTTGGTCAAAACAAAGATTTAGATAGAAGGAATGGTTGTTATCCTGGAAACTTTTTCCTCCCGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCCCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA759032 [CCTTTAGGGAGATGTTCCCCTTTTCCGGAGGCTCAACCAGTAATTGCATTTATGACCACCCCCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTAAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATTTGGATCTTCCAACAGACTCGACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTTTAGGGCGGAAAGGAACTGTGGTCCCAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATAAGGAGGAAGATGTAGAGTAAACTTTGCATTGTTCAAATGAATTCATCGAATGGCATTTTCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTTTTTTGGTCAAAACAAAGATTTAGATAGAAGGAATGGTTGTTATCCTGGAAACTTTTTCCTCCCGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCCCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9572#0 --------GTCAGCTAGCCGCCGGCTTCAGGCTAAGCCCTAAACCCGCGTCTCCCCCCTC 52
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 AGGCTAACTAAGCCCTAAACCCGCGTGTCTCCTCCCTCCTCGCGAGTTCGCCGGCCGCCT 60
consensus_9572#0 TCCGAGTCTCCGGCGCGGAGTATCCGTCCGCCCCGCGCGCAGGTGCAGCTCGCCGGCTGG 112
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 CGCCTGCGTCGATCTCCAGTGGGCAGCGGCGCCGGCGTCTGCTGCTTCCGCCGCATCCTC 120
consensus_9572#0 GGCTCGGAGCCAAGAGCATCCCCTCGGGAATTTGTGATATTAGTTGGAAGGAAGGATATT 172
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 GCCCGCTGCCAAGAGCACCCCCGGTGAATTTGCGAGATCAGTTGGGAGTAAGGACATTTC 180
consensus_9572#0 TGGCTGTGGTAAAACTGGTATTGATAAATAGAGCACAGATGCGGCTAACTGTTGGCCAAG 232
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 GGCTGCTGTAAAATTGGTTTTCATAAGCAGAGCAGCAGATGAGGCTAACTGTTGGCCAAG 240
consensus_9572#0 TGCATCGACATGTACTTGCATTGGCATCTTCTCGGTCATGCTTCGTCCTTGGTGATCACC 292
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 TGCATCGACATGTGCTTGCATTGGCATCTTCGCGATCATGCTTCGTCCTCGGTGACAACC 300
consensus_9572#0 TTCCATTCAGAATGCTTTCACTTCCACGAGTGGTAAGATTTCACCAAACCGCTTGGCATG 352
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 TCCCATTGAGAATGCTTTCATTACCACGAGCGGTTAGATTTCACCAGACCGCTTGGCTTG 360
consensus_9572#0 ATATTCAAACTGTGGAAGATAAGAGTGGTCCGCTAACTCTAGCTAGTCTTGAAGTGCAAA 412
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 GTACTGAAACAGTACAAGATAAGAGTGCTTCACTAACTCTAGCTAGTCTTGAAGGGCAAA 420
consensus_9572#0 ACAAAGTTGAATATGTTAAGAAAGAAAGAGCAACACGTACTGGAGGCATAAAGCCATCTT 472
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 ACAAAGTTGAATATGGTAAGAAAGAAAAAGCAACACGCATTGGAGGTCCAAAGCCGTCTT 480
consensus_9572#0 CAAGGGCTTCAGCTCTTAATATGAAACCAAAAGTTTCTTCATTCAATGCCAAACCAGTAA 532
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 CAAGGGCTTCTGCTCTTAAGGTGAAACCAAAAGTTTCTTCATTTAATTCCAAACCAGCAA 540
consensus_9572#0 AGAGTGCCTTGCCGAAATCAGCAGTACTGAAGAAGACTCTGAAGATAGATGAATCTCTTT 592
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 AGAGCACCTTACCGAAATCAGCAGTAGTGAAGAAGACTCTGAAGATAGATGAATCTCTTT 600
consensus_9572#0 TTTCTGCAAAATCATTTGAAGAACTCGGTTTGCCACCTTTGCTTATAGATAGGTTGAACA 652
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 TCTCTGCAAAATCATTTGAAGAGCTTGGTTTGCCGCCTTTGCTTATAGATCGGTTGAACA 660
consensus_9572#0 AGGAAGGTCTTACTGCTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAA 712
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 AGGAAGGTCTAAGTACTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAA 720
consensus_9572#0 AGCACGATGCAGTTATCCAATCATATACTGGCTCAGGGAAGACACTTGCTTATCTTCTCC 772
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 AGCATGATGCAGTTATCCAGTCATATACGGGCTCAGGGAAGACACTCGCTTACCTTCTCC 780
consensus_9572#0 CTATTCTTTCTGAAATAGGCCCTCTGAAGAGGCCTACAGAACAAGACAGTTCTGATAAGA 832
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 CTATTCTTTCTGAAATAGGCCCCCTAAAGAGGCCTACAGAACAAGATGGTTCTGATAAGA 840
consensus_9572#0 GATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCTAGAGAATTAGGAATGCAAATAGTGC 892
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 GATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCCAGAGAATTAGGAATGCAGATAGTGC 900
consensus_9572#0 GAGAAGTGGAGAAGATATTGGGCCCTAATGATAAGAGACTTGTCCAACAACTTGTTGGTG 952
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 GAGAAGTGGAGAAGATTTTGGGCCCTAATGATAAGAGGCTTGTCCAACAACTTGTTGGTG 960
consensus_9572#0 GTGCTAATCGTTCGAGGCAAGAAGAAGCATTGAAGAAGAACAAGCCAATTATTGTTGTTG 1012
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 GGGCTAATCGTTCGAGGCAGGAAGAAGCATTGAAAAAGAACAAGCCACTTATTGTTGTGG 1020
consensus_9572#0 GGACACCTGGTCGTATTTCTGAAATTTCAGCAGCCGGCAAGCTACACACCCACAGTTGCC 1072
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 GAACACCTGGTCGTATTTCTGAAATTTCAGCAGGGGGCAAGCTACACACCCATGGTTGCC 1080
consensus_9572#0 GCTTTCTTGTACTGGATGAAGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGC 1132
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 GCTTTCTTGTACTGGATGAGGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGC 1140
consensus_9572#0 ATAGAATACTTGAACATGTAGGAAGGAAATCGGGTACTTCATCTAGAGATATTCTTGGCC 1192
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 ATAGAATACTTGAACATGTAGGAAGGAAATCTGGTACTTCATCTAGAGATATTCTTGGCC 1200
consensus_9572#0 CTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCCGCAACGATACCATTTTCAG 1252
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 CTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCTGCAACAATACCGTTTTCAG 1260
consensus_9572#0 TTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTG 1312
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 TTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTG 1320
consensus_9572#0 TTCCACTTGAGTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGCCAGATGCCAACTCCA 1372
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 TTCCACTTGATTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGACAGATGCCAACCCCA 1380
consensus_9572#0 ACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTGACAGCTTACCACCATCTTTGGAAC 1432
consensus_9572#2 ------------------------------------------------------------
consensus_9572#1 ACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTAACAGCTTACCACCATCTTTGGAAC 1440
consensus_9572#0 ATTACTATTGTACATCCAAGGCTCAACACAAAGTGGACACTTTAAGGAGATGTATCCATG 1492
consensus_9572#2 --------------------------------------CCTTTAGGGAGATGTTCCCCTT 22
consensus_9572#1 ATTACTATTGTATATCCAAGGCTCAACACAAAGTTGACACTTTGAGGAGATGTATCCATG 1500
**** ******** ** *
consensus_9572#0 CTCTGGAGGCTCAGACAGTAATTGCATTTATGAACAACACCAAGCCATTGAAGGATGTTG 1552
consensus_9572#2 TTCCGGAGGCTCAACCAGTAATTGCATTTATGACCACCCCCAAGCCATTGAAGGATGTTG 82
consensus_9572#1 CTCTGGAAGCTCAGACAGTTATTGCATTTATGAACAACACCAAGCCATTGAAAGATGTTG 1560
** *** ***** **** ************* ** * ************* *******
consensus_9572#0 TATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGC 1612
consensus_9572#2 TATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGC 142
consensus_9572#1 TATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAGCTACATGGAGATCTTGGAAAGC 1620
************************************* **********************
consensus_9572#0 TTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAA 1672
consensus_9572#2 TTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTAAGAGTTCTAGTTACAA 202
consensus_9572#1 TTGCAAGATCAACTGTGCTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAA 1680
******* ******** ************************* ****************
consensus_9572#0 ATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATCTGGATC 1732
consensus_9572#2 ATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATTTGGATC 262
consensus_9572#1 ATGAGTTGTCTGCCAGAGGACTGGACGTGCCAGAATGTGATCTTGTGATTAATCTGGATC 1740
************************* ************** ************ ******
consensus_9572#0 TTCCAACAGACTCAACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTCTAGGGCGGA 1792
consensus_9572#2 TTCCAACAGACTCGACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTTTAGGGCGGA 322
consensus_9572#1 TTCCAACAGACTCTACACACTATGCCCACAGAGCTGGCCGAACGGGCCGTCTAGGGCGGA 1800
************* ***************************** ****** *********
consensus_9572#0 AAGGAACTGTGGTCACAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCA 1852
consensus_9572#2 AAGGAACTGTGGTCCCAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCA 382
consensus_9572#1 AAGGAACTGTGGTCACAATATGCGAAGAAACTGAAACATTTGTTGTAAGAAAAATGCGCA 1860
************** ******* ******** ***************** **********
consensus_9572#0 AGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATA 1912
consensus_9572#2 AGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATA 442
consensus_9572#1 AGCAATTAGCTGTACCCATCAAGCCATGCGAATTCACGGAAGGCAAGTTGCTTGTTCATA 1920
**************************** ******** ***** *** * **********
consensus_9572#0 AGGAGGAAGATGTAGAGTAAACTATGCATTGTTCAAATGA-------------------- 1952
consensus_9572#2 AGGAGGAAGATGTAGAGTAAACTTTGCATTGTTCAAATGA-------------------- 482
consensus_9572#1 ATGAGGAAGATGTAGAATAAGCTCTGCATTGTCGAAATGACATTTAATGTCTTGAAGTGT 1980
* ************** *** ** ******** ******
consensus_9572#0 -ATTCATCGAATGGCATTT-TCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTT 2010
consensus_9572#2 -ATTCATCGAATGGCATTT-TCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTT 540
consensus_9572#1 TATTTGTGTATGGGCATTTCTCATAGATTGTATTATCTTAAAATGTTATCAACCGATGTT 2040
*** * * ******* ************** **** ******* **** *****
consensus_9572#0 TTTTGG-TCGATGCAAAGATTCAGATAGA-AGGAATGGTTGT-TATCCTGGAAACTTTTT 2067
consensus_9572#2 TTTTGG-TCAAAACAAAGATTTAGATAGA-AGGAATGGTTGT-TATCCTGGAAACTTTTT 597
consensus_9572#1 TTTTTGCTCGATACAAATATTCAGATAAATGGGAATAGTTGTCTTTCCTGGGAAAAAAAA 2100
**** * ** * **** *** ***** * ***** ***** * ****** **
consensus_9572#0 CCTCACGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCACCTTCCTATG 2127
consensus_9572#2 CCTCCCGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCCCCTTCCAAAA 657
consensus_9572#1 A----------------------------------------------------------- 2101
consensus_9572#0 GAGATGTACTGTAATGTGTAAAATGACTCCAAGAAATTACAGTATATGCT 2177
consensus_9572#2 AAAAAAAAAAAAAAAAAAAAA----------------------------- 678
consensus_9572#1 --------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||