These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9572#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2177 fasta sequence [GTCAGCTAGCCGCCGGCTTCAGGCTAAGCCCTAAACCCGCGTCTCCCCCCTCTCCGAGTCTCCGGCGCGGAGTATCCGTCCGCCCCGCGCGCAGGTGCAGCTCGCCGGCTGGGGCTCGGAGCCAAGAGCATCCCCTCGGGAATTTGTGATATTAGTTGGAAGGAAGGATATTTGGCTGTGGTAAAACTGGTATTGATAAATAGAGCACAGATGCGGCTAACTGTTGGCCAAGTGCATCGACATGTACTTGCATTGGCATCTTCTCGGTCATGCTTCGTCCTTGGTGATCACCTTCCATTCAGAATGCTTTCACTTCCACGAGTGGTAAGATTTCACCAAACCGCTTGGCATGATATTCAAACTGTGGAAGATAAGAGTGGTCCGCTAACTCTAGCTAGTCTTGAAGTGCAAAACAAAGTTGAATATGTTAAGAAAGAAAGAGCAACACGTACTGGAGGCATAAAGCCATCTTCAAGGGCTTCAGCTCTTAATATGAAACCAAAAGTTTCTTCATTCAATGCCAAACCAGTAAAGAGTGCCTTGCCGAAATCAGCAGTACTGAAGAAGACTCTGAAGATAGATGAATCTCTTTTTTCTGCAAAATCATTTGAAGAACTCGGTTTGCCACCTTTGCTTATAGATAGGTTGAACAAGGAAGGTCTTACTGCTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAAAGCACGATGCAGTTATCCAATCATATACTGGCTCAGGGAAGACACTTGCTTATCTTCTCCCTATTCTTTCTGAAATAGGCCCTCTGAAGAGGCCTACAGAACAAGACAGTTCTGATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCTAGAGAATTAGGAATGCAAATAGTGCGAGAAGTGGAGAAGATATTGGGCCCTAATGATAAGAGACTTGTCCAACAACTTGTTGGTGGTGCTAATCGTTCGAGGCAAGAAGAAGCATTGAAGAAGAACAAGCCAATTATTGTTGTTGGGACACCTGGTCGTATTTCTGAAATTTCAGCAGCCGGCAAGCTACACACCCACAGTTGCCGCTTTCTTGTACTGGATGAAGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCGGGTACTTCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCCGCAACGATACCATTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTGTTCCACTTGAGTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGCCAGATGCCAACTCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTGACAGCTTACCACCATCTTTGGAACATTACTATTGTACATCCAAGGCTCAACACAAAGTGGACACTTTAAGGAGATGTATCCATGCTCTGGAGGCTCAGACAGTAATTGCATTTATGAACAACACCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATCTGGATCTTCCAACA-GACTCAACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTCTAGGGCGGAAAGGAACTGTGGTCACAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATAAGGAGGAAGATGTAGAGTAAACTATGCATTGTTCAAATGAATTCATCGAATGGCATTTTCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTTTTTTGGTCGATGCAAAGATTCAGATAGAAGGAATGGTTGTTATCCTGGAAACTTTTTCCTCACGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCACCTTCCTATGGAGATGTACTGTAATGTGTAAAATGACTCCAAGAAATTACAGTATATGCT] [+] EMBL AK100670 [GTCAGCTAGCCGCCGGCTTCAGGCTAAGCCCTAAACCCGCGTCTCCCCCCTCTCCGAGTCTCCGGCGCGGAGTATCCGTCCGCCCCGCGCGCAGGTGCAGCTCGCCGGCTGGGGCTCGGAGCCAAGAGCATCCCCTCGGGAATTTGTGATATTAGTTGGAAGGAAGGATATTTGGCTGTGGTAAAACTGGTATTGATAAATAGAGCACAGATGCGGCTAACTGTTGGCCAAGTGCATCGACATGTACTTGCATTGGCATCTTCTCGGTCATGCTTCGTCCTTGGTGATCACCTTCCATTCAGAATGCTTTCACTTCCACGAGTGGTAAGATTTCACCAAACCGCTTGGCATGATATTCAAACTGTGGAAGATAAGAGTGGTCCGCTAACTCTAGCTAGTCTTGAAGTGCAAAACAAAGTTGAATATGTTAAGAAAGAAAGAGCAACACGTACTGGAGGCATAAAGCCATCTTCAAGGGCTTCAGCTCTTAATATGAAACCAAAAGTTTCTTCATTCAATGCCAAACCAGTAAAGAGTGCCTTGCCGAAATCAGCAGTACTGAAGAAGACTCTGAAGATAGATGAATCTCTTTTTTCTGCAAAATCATTTGAAGAACTCGGTTTGCCACCTTTGCTTATAGATAGGTTGAACAAGGAAGGTCTTACTGCTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAAAGCACGATGCAGTTATCCAATCATATACTGGCTCAGGGAAGACACTTGCTTATCTTCTCCCTATTCTTTCTGAAATAGGCCCTCTGAAGAGGCCTACAGAACAAGACAGTTCTGATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCTAGAGAATTAGGAATGCAAATAGTGCGAGAAGTGGAGAAGATATTGGGCCCTAATGATAAGAGACTTGTCCAACAACTTGTTGGTGGTGCTAATCGTTCGAGGCAAGAAGAAGCATTGAAGAAGAACAAGCCAATTATTGTTGTTGGGACACCTGGTCGTATTTCTGAAATTTCAGCAGCCGGCAAGCTACACACCCACAGTTGCCGCTTTCTTGTACTGGATGAAGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCGGGTACTTCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCCGCAACGATACCATTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTGTTCCACTTGAGTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGCCAGATGCCAACTCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTGACAGCTTACCACCATCTTTGGAACATTACTATTGTACATCCAAGGCTCAACACAAAGTGGACACTTTAAGGAGATGTATCCATGCTCTGGAGGCTCAGACAGTAATTGCATTTATGAACAACACCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATCTGGATCTTCCAACA GACTCAACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTCTAGGGCGGAAAGGAACTGTGGTCACAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATAAGGAGGAAGATGTAGAGTAAACTATGCATTGTTCAAATGAATTCATCGAATGGCATTTTCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTTTTTTGGTCGATGCAAAGATTCAGATAGAAGGAATGGTTGTTATCCTGGAAACTTTTTCCTCACGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCACCTTCCTATGGAGATGTACTGTAATGTGTAAAATGACTCCAAGAAATTACAGTATATGCT] [+] EMBL CA764556 [ ACAAGCCAATTATTGTTGTTGGGACACCTGGTCGTATTTCTGAAATTTCAGCAGCCGGCAAGCTACACACCCACAGTTGCCGCTTTCTTGTACTGGATGAAGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCGGGTACTTCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCCGCAACGATACCATTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTGTTCCACTTGAGTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGCCAGATGCCAACTCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTGACAGCTTACCACCATCTTTGGAACATTACTATTGTACATCCAAGGCTCAACACAAAGTGGACACTTTAAGGAGATGTATCCATGCTCTGGAGGCTCAGACAGTAATTGCATTTATGAACAACACCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGNTCAAGGATGGTGAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGNGATTAATCTGGATCTTCCAACAGGACTCGACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTCTAGGGCGGNAAGGNAC ] consensusID : consensus_9572#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2101 fasta sequence [AGGCTAACTAAGCCCTAAACCCGCGTGTCTCCTCCCTCCTCGCGAGTTCGCCGGCCGCCTCGCCTGCGTCGATCTCCAGTGGGCAGCGGCGCCGGCGTCTGCTGCTTCCGCCGCATCCTCGCCCGCTGCCAAGAGCACCCCCGGTGAATTTGCGAGATCAGTTGGGAGTAAGGACATTTCGGCTGCTGTAAAATTGGTTTTCATAAGCAGAGCAGCAGATGAGGCTAACTGTTGGCCAAGTGCATCGACATGTGCTTGCATTGGCATCTTCGCGATCATGCTTCGTCCTCGGTGACAACCTCCCATTGAGAATGCTTTCATTACCACGAGCGGTTAGATTTCACCAGACCGCTTGGCTTGGTACTGAAACAGTACAAGATAAGAGTGCTTCACTAACTCTAGCTAGTCTTGAAGGGCAAAACAAAGTTGAATATGGTAAGAAAGAAAAAGCAACACGCATTGGAGGTCCAAAGCCGTCTTCAAGGGCTTCTGCTCTTAAGGTGAAACCAAAAGTTTCTTCATTTAATTCCAAACCAGCAAAGAGCACCTTACCGAAATCAGCAGTAGTGAAGAAGACTCTGAAGATAGATGAATCTCTTTTCTCTGCAAAATCATTTGAAGAGCTTGGTTTGCCGCCTTTGCTTATAGATCGGTTGAACAAGGAAGGTCTAAGTACTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAAAGCATGATGCAGTTATCCAGTCATATACGGGCTCAGGGAAGACACTCGCTTACCTTCTCCCTATTCTTTCTGAAATAGGCCCCCTAAAGAGGCCTACAGAACAAGATGGTTCTGATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCCAGAGAATTAGGAATGCAGATAGTGCGAGAAGTGGAGAAGATTTTGGGCCCTAATGATAAGAGGCTTGTCCAACAACTTGTTGGTGGGGCTAATCGTTCGAGGCAGGAAGAAGCATTGAAAAAGAACAAGCCACTTATTGTTGTGGGAACACCTGGTCGTATTTCTGAAATTTCAGCAGGGGGCAAGCTACACACCCATGGTTGCCGCTTTCTTGTACTGGATGAGGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCTGGTACTTCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCTGCAACAATACCGTTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTGTTCCACTTGATTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGACAGATGCCAACCCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTAACAGCTTACCACCATCTTTGGAACATTACTATTGTATATCCAAGGCTCAACACAAAGTTGACACTTTGAGGAGATGTATCCATGCTCTGGAAGCTCAGACAGTTATTGCATTTATGAACAACACCAAGCCATTGAAAGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAGCTACATGGAGATCTTGGAAAGCTTGCAAGATCAACTGTGCTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGACGTGCCAGAATGTGATCTTGTGATTAATCTGGATCTTCCAACAGACTCTACACACTATGCCCACAGAGCTGGCCGAACGGGCCGTCTAGGGCGGAAAGGAACTGTGGTCACAATATGCGAAGAAACTGAAACATTTGTTGTAAGAAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGCGAATTCACGGAAGGCAAGTTGCTTGTTCATAATGAGGAAGATGTAGAATAAGCTCTGCATTGTCGAAATGACATTTAATGTCTTGAAGTGTTATTTGTGTATGGGCATTTCTCATAGATTGTATTATCTTAAAATGTTATCAACCGATGTTTTTTTGCTCGATACAAATATTC-AGATAAATGGGAATAGTTGTCTTTCCTGGGAAAAAAAAA] [+] EMBL AK071610 [AGGCTAACTAAGCCCTAAACCCGCGTGTCTCCTCCCTCCTCGCGAGTTCGCCGGCCGCCTCGCCTGCGTCGATCTCCAGTGGGCAGCGGCGCCGGCGTCTGCTGCTTCCGCCGCATCCTCGCCCGCTGCCAAGAGCACCCCCGGTGAATTTGCGAGATCAGTTGGGAGTAAGGACATTTCGGCTGCTGTAAAATTGGTTTTCATAAGCAGAGCAGCAGATGAGGCTAACTGTTGGCCAAGTGCATCGACATGTGCTTGCATTGGCATCTTCGCGATCATGCTTCGTCCTCGGTGACAACCTCCCATTGAGAATGCTTTCATTACCACGAGCGGTTAGATTTCACCAGACCGCTTGGCTTGGTACTGAAACAGTACAAGATAAGAGTGCTTCACTAACTCTAGCTAGTCTTGAAGGGCAAAACAAAGTTGAATATGGTAAGAAAGAAAAAGCAACACGCATTGGAGGTCCAAAGCCGTCTTCAAGGGCTTCTGCTCTTAAGGTGAAACCAAAAGTTTCTTCATTTAATTCCAAACCAGCAAAGAGCACCTTACCGAAATCAGCAGTAGTGAAGAAGACTCTGAAGATAGATGAATCTCTTTTCTCTGCAAAATCATTTGAAGAGCTTGGTTTGCCGCCTTTGCTTATAGATCGGTTGAACAAGGAAGGTCTAAGTACTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAAAGCATGATGCAGTTATCCAGTCATATACGGGCTCAGGGAAGACACTCGCTTACCTTCTCCCTATTCTTTCTGAAATAGGCCCCCTAAAGAGGCCTACAGAACAAGATGGTTCTGATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCCAGAGAATTAGGAATGCAGATAGTGCGAGAAGTGGAGAAGATTTTGGGCCCTAATGATAAGAGGCTTGTCCAACAACTTGTTGGTGGGGCTAATCGTTCGAGGCAGGAAGAAGCATTGAAAAAGAACAAGCCACTTATTGTTGTGGGAACACCTGGTCGTATTTCTGAAATTTCAGCAGGGGGCAAGCTACACACCCATGGTTGCCGCTTTCTTGTACTGGATGAGGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCTGGTACTTCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCTGCAACAATACCGTTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTGTTCCACTTGATTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGACAGATGCCAACCCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTAACAGCTTACCACCATCTTTGGAACATTACTATTGTATATCCAAGGCTCAACACAAAGTTGACACTTTGAGGAGATGTATCCATGCTCTGGAAGCTCAGACAGTTATTGCATTTATGAACAACACCAAGCCATTGAAAGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAGCTACATGGAGATCTTGGAAAGCTTGCAAGATCAACTGTGCTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGACGTGCCAGAATGTGATCTTGTGATTAATCTGGATCTTCCAACAGACTCTACACACTATGCCCACAGAGCTGGCCGAACGGGCCGTCTAGGGCGGAAAGGAACTGTGGTCACAATATGCGAAGAAACTGAAACATTTGTTGTAAGAAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGCGAATTCACGGAAGGCAAGTTGCTTGTTCATAATGAGGAAGATGTAGAATAAGCTCTGCATTGTCGAAATGACATTTAATGTCTTGAAGTGTTATTTGTGTATGGGCATTTCTCATAGATTGTATTATCTTAAAATGTTATCAACCGATGTTTTTTTGCTCGATACAAATATTC AGATAAATGGGAATAGTTGT ] [+] EMBL OSC111871 [ TGGCCAAGTGCATCGACATGTGCTTGCATTGGCATCTTCGCGATCATGCTTCGTCCTCGGTGACAACCTCCCATTGAGAATGCTTTCATTACCACGAGCGGTTAGATTTCACCAGACCGCTTGGCTTGGTACTGAAACAGTACAAGATAAGAGTGCTTCACTAACTCTAGCTAGTCTTGAAGGGCAAAACAAAGTTGAATATGGTAAGAAAGAAAAAGCAACACGCATTGGAGGTCCAAAGCCGTCTTCAAGGGCTTCTGCTCTTAAGGTG AACCAAAAGTTTCTTCATTTAATTCCAAACCAGCAAAGAGCACCTTACCGAAATCAGCAGTAGTtagg ] [+] EMBL AU100653 [ TANGAAAAATGCGCAAGCAATTAGCTGTACCCANCAAGCCATGCGAATTCACGGAAGGCAAGTTGCTTGTTCATAATGAGGAAGATGTAGAATAAGCTCTGCATTGTCGAAATGACATTTAATGTCTTGAAGTGTTATTTGTGTATGGGCATTTCTCATAGATTGTATTATCTTACAATGTTATCAACCGATGTTTTTTTGCTCGATACAAATATTCAAGATAAATGGGAATAGTTGTCTTTCCTGGGAAAAAAAAA] consensusID : consensus_9572#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence [CCTTTAGGGAGATGTTCCCCTTTTCCGGAGGCTCAACCAGTAATTGCATTTATGACCACCCCCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTAAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATTTGGATCTTCCAACAGACTCGACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTTTAGGGCGGAAAGGAACTGTGGTCCCAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATAAGGAGGAAGATGTAGAGTAAACTTTGCATTGTTCAAATGAATTCATCGAATGGCATTTTCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTTTTTTGGTCAAAACAAAGATTTAGATAGAAGGAATGGTTGTTATCCTGGAAACTTTTTCCTCCCGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCCCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA759032 [CCTTTAGGGAGATGTTCCCCTTTTCCGGAGGCTCAACCAGTAATTGCATTTATGACCACCCCCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTAAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATTTGGATCTTCCAACAGACTCGACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTTTAGGGCGGAAAGGAACTGTGGTCCCAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATAAGGAGGAAGATGTAGAGTAAACTTTGCATTGTTCAAATGAATTCATCGAATGGCATTTTCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTTTTTTGGTCAAAACAAAGATTTAGATAGAAGGAATGGTTGTTATCCTGGAAACTTTTTCCTCCCGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCCCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9572#0 --------GTCAGCTAGCCGCCGGCTTCAGGCTAAGCCCTAAACCCGCGTCTCCCCCCTC 52 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 AGGCTAACTAAGCCCTAAACCCGCGTGTCTCCTCCCTCCTCGCGAGTTCGCCGGCCGCCT 60 consensus_9572#0 TCCGAGTCTCCGGCGCGGAGTATCCGTCCGCCCCGCGCGCAGGTGCAGCTCGCCGGCTGG 112 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 CGCCTGCGTCGATCTCCAGTGGGCAGCGGCGCCGGCGTCTGCTGCTTCCGCCGCATCCTC 120 consensus_9572#0 GGCTCGGAGCCAAGAGCATCCCCTCGGGAATTTGTGATATTAGTTGGAAGGAAGGATATT 172 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 GCCCGCTGCCAAGAGCACCCCCGGTGAATTTGCGAGATCAGTTGGGAGTAAGGACATTTC 180 consensus_9572#0 TGGCTGTGGTAAAACTGGTATTGATAAATAGAGCACAGATGCGGCTAACTGTTGGCCAAG 232 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 GGCTGCTGTAAAATTGGTTTTCATAAGCAGAGCAGCAGATGAGGCTAACTGTTGGCCAAG 240 consensus_9572#0 TGCATCGACATGTACTTGCATTGGCATCTTCTCGGTCATGCTTCGTCCTTGGTGATCACC 292 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 TGCATCGACATGTGCTTGCATTGGCATCTTCGCGATCATGCTTCGTCCTCGGTGACAACC 300 consensus_9572#0 TTCCATTCAGAATGCTTTCACTTCCACGAGTGGTAAGATTTCACCAAACCGCTTGGCATG 352 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 TCCCATTGAGAATGCTTTCATTACCACGAGCGGTTAGATTTCACCAGACCGCTTGGCTTG 360 consensus_9572#0 ATATTCAAACTGTGGAAGATAAGAGTGGTCCGCTAACTCTAGCTAGTCTTGAAGTGCAAA 412 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 GTACTGAAACAGTACAAGATAAGAGTGCTTCACTAACTCTAGCTAGTCTTGAAGGGCAAA 420 consensus_9572#0 ACAAAGTTGAATATGTTAAGAAAGAAAGAGCAACACGTACTGGAGGCATAAAGCCATCTT 472 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 ACAAAGTTGAATATGGTAAGAAAGAAAAAGCAACACGCATTGGAGGTCCAAAGCCGTCTT 480 consensus_9572#0 CAAGGGCTTCAGCTCTTAATATGAAACCAAAAGTTTCTTCATTCAATGCCAAACCAGTAA 532 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 CAAGGGCTTCTGCTCTTAAGGTGAAACCAAAAGTTTCTTCATTTAATTCCAAACCAGCAA 540 consensus_9572#0 AGAGTGCCTTGCCGAAATCAGCAGTACTGAAGAAGACTCTGAAGATAGATGAATCTCTTT 592 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 AGAGCACCTTACCGAAATCAGCAGTAGTGAAGAAGACTCTGAAGATAGATGAATCTCTTT 600 consensus_9572#0 TTTCTGCAAAATCATTTGAAGAACTCGGTTTGCCACCTTTGCTTATAGATAGGTTGAACA 652 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 TCTCTGCAAAATCATTTGAAGAGCTTGGTTTGCCGCCTTTGCTTATAGATCGGTTGAACA 660 consensus_9572#0 AGGAAGGTCTTACTGCTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAA 712 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 AGGAAGGTCTAAGTACTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAA 720 consensus_9572#0 AGCACGATGCAGTTATCCAATCATATACTGGCTCAGGGAAGACACTTGCTTATCTTCTCC 772 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 AGCATGATGCAGTTATCCAGTCATATACGGGCTCAGGGAAGACACTCGCTTACCTTCTCC 780 consensus_9572#0 CTATTCTTTCTGAAATAGGCCCTCTGAAGAGGCCTACAGAACAAGACAGTTCTGATAAGA 832 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 CTATTCTTTCTGAAATAGGCCCCCTAAAGAGGCCTACAGAACAAGATGGTTCTGATAAGA 840 consensus_9572#0 GATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCTAGAGAATTAGGAATGCAAATAGTGC 892 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 GATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCCAGAGAATTAGGAATGCAGATAGTGC 900 consensus_9572#0 GAGAAGTGGAGAAGATATTGGGCCCTAATGATAAGAGACTTGTCCAACAACTTGTTGGTG 952 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 GAGAAGTGGAGAAGATTTTGGGCCCTAATGATAAGAGGCTTGTCCAACAACTTGTTGGTG 960 consensus_9572#0 GTGCTAATCGTTCGAGGCAAGAAGAAGCATTGAAGAAGAACAAGCCAATTATTGTTGTTG 1012 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 GGGCTAATCGTTCGAGGCAGGAAGAAGCATTGAAAAAGAACAAGCCACTTATTGTTGTGG 1020 consensus_9572#0 GGACACCTGGTCGTATTTCTGAAATTTCAGCAGCCGGCAAGCTACACACCCACAGTTGCC 1072 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 GAACACCTGGTCGTATTTCTGAAATTTCAGCAGGGGGCAAGCTACACACCCATGGTTGCC 1080 consensus_9572#0 GCTTTCTTGTACTGGATGAAGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGC 1132 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 GCTTTCTTGTACTGGATGAGGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGC 1140 consensus_9572#0 ATAGAATACTTGAACATGTAGGAAGGAAATCGGGTACTTCATCTAGAGATATTCTTGGCC 1192 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 ATAGAATACTTGAACATGTAGGAAGGAAATCTGGTACTTCATCTAGAGATATTCTTGGCC 1200 consensus_9572#0 CTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCCGCAACGATACCATTTTCAG 1252 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 CTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCTGCAACAATACCGTTTTCAG 1260 consensus_9572#0 TTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTG 1312 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 TTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTG 1320 consensus_9572#0 TTCCACTTGAGTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGCCAGATGCCAACTCCA 1372 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 TTCCACTTGATTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGACAGATGCCAACCCCA 1380 consensus_9572#0 ACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTGACAGCTTACCACCATCTTTGGAAC 1432 consensus_9572#2 ------------------------------------------------------------ consensus_9572#1 ACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTAACAGCTTACCACCATCTTTGGAAC 1440 consensus_9572#0 ATTACTATTGTACATCCAAGGCTCAACACAAAGTGGACACTTTAAGGAGATGTATCCATG 1492 consensus_9572#2 --------------------------------------CCTTTAGGGAGATGTTCCCCTT 22 consensus_9572#1 ATTACTATTGTATATCCAAGGCTCAACACAAAGTTGACACTTTGAGGAGATGTATCCATG 1500 **** ******** ** * consensus_9572#0 CTCTGGAGGCTCAGACAGTAATTGCATTTATGAACAACACCAAGCCATTGAAGGATGTTG 1552 consensus_9572#2 TTCCGGAGGCTCAACCAGTAATTGCATTTATGACCACCCCCAAGCCATTGAAGGATGTTG 82 consensus_9572#1 CTCTGGAAGCTCAGACAGTTATTGCATTTATGAACAACACCAAGCCATTGAAAGATGTTG 1560 ** *** ***** **** ************* ** * ************* ******* consensus_9572#0 TATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGC 1612 consensus_9572#2 TATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGC 142 consensus_9572#1 TATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAGCTACATGGAGATCTTGGAAAGC 1620 ************************************* ********************** consensus_9572#0 TTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAA 1672 consensus_9572#2 TTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTAAGAGTTCTAGTTACAA 202 consensus_9572#1 TTGCAAGATCAACTGTGCTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAA 1680 ******* ******** ************************* **************** consensus_9572#0 ATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATCTGGATC 1732 consensus_9572#2 ATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATTTGGATC 262 consensus_9572#1 ATGAGTTGTCTGCCAGAGGACTGGACGTGCCAGAATGTGATCTTGTGATTAATCTGGATC 1740 ************************* ************** ************ ****** consensus_9572#0 TTCCAACAGACTCAACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTCTAGGGCGGA 1792 consensus_9572#2 TTCCAACAGACTCGACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTTTAGGGCGGA 322 consensus_9572#1 TTCCAACAGACTCTACACACTATGCCCACAGAGCTGGCCGAACGGGCCGTCTAGGGCGGA 1800 ************* ***************************** ****** ********* consensus_9572#0 AAGGAACTGTGGTCACAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCA 1852 consensus_9572#2 AAGGAACTGTGGTCCCAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCA 382 consensus_9572#1 AAGGAACTGTGGTCACAATATGCGAAGAAACTGAAACATTTGTTGTAAGAAAAATGCGCA 1860 ************** ******* ******** ***************** ********** consensus_9572#0 AGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATA 1912 consensus_9572#2 AGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATA 442 consensus_9572#1 AGCAATTAGCTGTACCCATCAAGCCATGCGAATTCACGGAAGGCAAGTTGCTTGTTCATA 1920 **************************** ******** ***** *** * ********** consensus_9572#0 AGGAGGAAGATGTAGAGTAAACTATGCATTGTTCAAATGA-------------------- 1952 consensus_9572#2 AGGAGGAAGATGTAGAGTAAACTTTGCATTGTTCAAATGA-------------------- 482 consensus_9572#1 ATGAGGAAGATGTAGAATAAGCTCTGCATTGTCGAAATGACATTTAATGTCTTGAAGTGT 1980 * ************** *** ** ******** ****** consensus_9572#0 -ATTCATCGAATGGCATTT-TCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTT 2010 consensus_9572#2 -ATTCATCGAATGGCATTT-TCATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTT 540 consensus_9572#1 TATTTGTGTATGGGCATTTCTCATAGATTGTATTATCTTAAAATGTTATCAACCGATGTT 2040 *** * * ******* ************** **** ******* **** ***** consensus_9572#0 TTTTGG-TCGATGCAAAGATTCAGATAGA-AGGAATGGTTGT-TATCCTGGAAACTTTTT 2067 consensus_9572#2 TTTTGG-TCAAAACAAAGATTTAGATAGA-AGGAATGGTTGT-TATCCTGGAAACTTTTT 597 consensus_9572#1 TTTTTGCTCGATACAAATATTCAGATAAATGGGAATAGTTGTCTTTCCTGGGAAAAAAAA 2100 **** * ** * **** *** ***** * ***** ***** * ****** ** consensus_9572#0 CCTCACGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCACCTTCCTATG 2127 consensus_9572#2 CCTCCCGGGGAGTTGGTACTCCTCGGATCTATTATATATTTCTGTTGTCCCCTTCCAAAA 657 consensus_9572#1 A----------------------------------------------------------- 2101 consensus_9572#0 GAGATGTACTGTAATGTGTAAAATGACTCCAAGAAATTACAGTATATGCT 2177 consensus_9572#2 AAAAAAAAAAAAAAAAAAAAA----------------------------- 678 consensus_9572#1 -------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||