cluster # 9588

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Oryza sativa
cluster # 9588 cluster # 9588 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9588#0 length = 1483 sequences # 6
consensusID : consensus_9588#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1483
fasta sequence
                              [TTGACCTCTCCTTCCTCTCCCTCTGCTTCGTCCGTCCTGTAGCCATTGTTGACTAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGATTGATTGGTGAGCTCGTGTTGGTATTTTTGTTTGTTTGTAGGGAGGAGAGGTGGTTGCTGCGGCGGCGGAGGACGGCGATGGCGCGGCCGCCGGTGCTCTCCGTCGCGCTTCCCTCCGACACGGGACGCGTGCTCAGCATCCAGTCCCACACCGTCCAGGGATACGTTGGCAACAAATCAGCAGTCTTTCCCCTGCAACTCCTGGGCTTTGATGTGGATCCGATAAACTCGGTACAGTTTTCTAATCATACAGGGTACCCAACATTTAGAGGACAGGTCCTCAACGGCAGTCAGCTGTGGGATCTTATTGAAGGGCTGGCGGAAAACGATTTATTGCATTATACCCATTTATTAACAGGTTATATTGGATCTGTTTCCTTTTTAACTACTGTACTACAAGTTGTTGACAAATTACGATCAGTCAATCCTGATCTTGTATATGTTTGTGACCCGGTTCTAGGTGATGAAGGGAAACTATATGTCCCTCAGGATTTAATATCTGTTTATCAACAGAAGGTTGTCCCAGTTGCTACAATGCTTACACCTAACCAATTTGAAGTTGAACTACTCACTGGTTTAAGGATTACCTGTGAAGAAGATGGCTTGAAAGCTTGCAATGCGCTACATAGTGCTGGACCGCGAAAGGTGGTAATAACTAGTGCACTTATTGAAGATAAGCTGCTCCTCATTGGAAGCCACAAAAAAGCAAAGGAACAACCACCA-GAACAATTTAAGATTGAG-ATA-CCCAAGATACC-TGCATA-TTTCAC-GGGCACTGGAGA-TTTAACAACTGCCCTTCTACTAGGATGGAGTAAT-AAATA-CCCTGATAACCTTGAGAGGGC-GGCTGAACTGGCGGTATCCAGTTTGCAGGCACTCCTAAGG-AGAACTGTGGAAGACTATAAAAGAGCTGGGTTTGACCCCTCCACCAGC-AGCCTAGAGATCCGCTTGATTCAAAGCCAGGATGAAATTCGAAGGCCCCAGATTACATGCAAGGCTGTGAAGTATAGCTGAAACCATATCACAACCATGGCAAGCATCATCAAACATCAATTAGTGAATAGTGACTGGAGGGAGAGTACCAGTGTTAAAAACAATTTTGGTATTCTGCTTGTATGCACAATATTCATCAACATGCTTCCTGGCTTCAACTCTGGGGATACCATTTTAGTTGATCATAGTTTCAAAACAAGAAAGGGTCTGATTTCAAAAACAAAATAATACACATGCTGCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTAATCTCCTTTACAATTTGTCATGTTTTTGTGCCTATGAGACTGATATTGTACAAGGGATAGCTCCATCTTGGAAAGCTTTATTTTGTGTAAAATCTACAATGAATAAACGGCAGTTCCGTTGAAAAAAAAAAAAA]

[+] EMBL AK066514             [TTGACCTCTCCTTCCTCTCCCTCTGCTTCGTCCGTCCTGTAGCCATTGTTGACTAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGATTGATTGGTGAGCTCGTGTTGGTATTTTTGTTTGTTTGTAGGGAGGAGAGGTGGTTGCTGCGGCGGCGGAGGACGGCGATGGCGCGGCCGCCGGTGCTCTCCGTCGCGCTTCCCTCCGACACGGGACGCGTGCTCAGCATCCAGTCCCACACCGTCCAGGGATACGTTGGCAACAAATCAGCAGTCTTTCCCCTGCAACTCCTGGGCTTTGATGTGGATCCGATAAACTCGGTACAGTTTTCTAATCATACAGGGTACCCAACATTTAGAGGACAGGTCCTCAACGGCAGTCAGCTGTGGGATCTTATTGAAGGGCTGGCGGAAAACGATTTATTGCATTATACCCATTTATTAACAGGTTATATTGGATCTGTTTCCTTTTTAACTACTGTACTACAAGTTGTTGACAAATTACGATCAGTCAATCCTGATCTTGTATATGTTTGTGACCCGGTTCTAGGTGATGAAGGGAAACTATATGTCCCTCAGGATTTAATATCTGTTTATCAACAGAAGGTTGTCCCAGTTGCTACAATGCTTACACCTAACCAATTTGAAGTTGAACTACTCACTGGTTTAAGGATTACCTGTGAAGAAGATGGCTTGAAAGCTTGCAATGCGCTACATAGTGCTGGACCGCGAAAGGTGGTAATAACTAGTGCACTTATTGAAGATAAGCTGCTCCTCATTGGAAGCCACAAAAAAGCAAAGGAACAACCACCA GAACAATTTAAGATTGAG ATA CCCAAGATACC TGCATA TTTCAC GGGCACTGGAGA TTTAACAACTGCCCTTCTACTAGGATGGAGTAAT AAATA CCCTGATAACCTTGAGAGGGC GGCTGAACTGGCGGTATCCAGTTTGCAGGCACTCCTAAGG AGAACTGTGGAAGACTATAAAAGAGCTGGGTTTGACCCCTCCACCAGC AGCCTAGAGATCCGCTTGATTCAAAGCCAGGATGAAATTCGAAGGCCCCAGATTACATGCAAGGCTGTGAAGTATAGCTGAAACCATATCACAACCATGGCAAGCATCATCAAACATCAATTAGTGAATAGTGACTGGAGGGAGAGTACCAGTGTTAAAAACAATTTTGGTATTCTGCTTGTATGCACAATATTCATCAACATGCTTCCTGGCTTCAACTCTGGGGATACCATTTTAGTTGATCATAGTTTCAAAACAAGAAAGGGTCTGATTTCAAAAACAAAATAATACACATGCTGCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTAATCTCCTTTACAATTTGTCATGTTTTTGTGCCTATGAGACTGATATTGTACAAGGGATAGCTCCATCTTGGAAAGCTTTATTTTGTGTAAAATCTACAATGAATAAACGGC                       ]
[+] EMBL OSR2864A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TATATGTTTGTGACCCGGTTCTAGGTGATGAAGGGAAACTATATGTCCCTCAGGATTTAATATCTGTTTATCAACAGAAGGTTGTCCCAGTTGCTACAATGCTTACACCTAACCAATTTGAAGTTGAACTACTCACTGGTTTAAGGATTACCTGTGAAGAAGATGGCTTGAAAGCTTGCAATGCGCTACATAGTGCTGGACCGCGAAAGGTGGTAATAACTAGTGCACTTATTGAAGATAAGCTGCTCCTCATTGGAAGCCACAAAAAAGCAAAGGAACAACCACCA GAACAATTTAAGATTGAG ATA CCCAAGATACC TGCATA TTTCACGGGGCACTGGAGA T                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSR01251A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCAACAGAAGGTTGTCCCAGTTGCTACAATGCTTACACCTAACCAATTTGAAGTTGAACTACTCACTGGNTTAAGGATTACCTGTGAAGCAGATGGCTTGAAAGCTTGCAATGCGCTACATAGTGCTGGACCGCGAAAGGTGGTAATAACTAGNGCACTTATTGAAGATAAGCTGCTCCTCATTGGAAGCCACAAAAAAGCAAAGGAACAACCACCA GAACAATTTAAGATTGNG ATA CCCAAGATACC TGCATA TTTCAC GGGCACTGGAGA TTTAACAACTGCCCTTCTACTAGGATGGNGTAAT AAATA CCCTGNTAACCTTGAGAGGGC GGCTGAACTGGCGGTATCCAGTTTGCAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU174149             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAAGAAGATGGCTTGAAAGCTTGCAATGCGCTACATAGTGCTGGACCGCGAAAGGTGGTAATAACTAGTGCACTTATTGAAGATAAGCTGCTCCTCATTGGAAGCCACAAAAAAGCAAAGGAACAACCACCA GAACAATTTAAGATTGAG ATA CCCAAGATACC TGCATA TTTCAC GGGCACTGGAGA TTTAACAACTGCCCTTCTACTAGGATGGAGTAAT AAATA CCCTGATAACCTTGAGAGGGC GGCTGAACTGGCGGTATCCAGTTTGCAGGCACTCCTAAGG AGAACTGTGGAAGACTATAAAAGAGCTGGGTTTGACCCCTCCACCAGC AGCCTAGAGATCCGCTTGATTCAAAGCCAGGATGAAATTCGAAGGCCCCAGATTACATGCAAGGCTGTGAAGTATAGCTGAAACCATATCACAACCATGGCAAGCATCAT                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU101595             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 accncCCAGGACCAATTTAAGATTGAGAATACCCCAGGATACCTTGCATATTTTCAC GGGCACTGAAGATTTTAACAANTGCCCTTCTACTAGGATGGAGTAATAAAATACCCCTGANAACCTTGAAAGGNCGGGCTGAACTGGCGGTATCCAGTTTGCAGGCACTCCTAAGGAAGAACTGTGGAAGACTATAAAAGAGCTGGGTTTGACCCCTCCACCAGCAAGCCTAGAGATCCGCTTGATTCAAAGCCAGGATGAAATTCGAAGGCCCCAGATTACATGCAAGGCTGTGAAGTATAGCTGAAACCATATCACAACCATGGCAAGCATCATCAAACATCAATTAGTGAATAGTGACTGGAGGGAGAGTACCAGTGTTAAAAACAATTTTGGTATTCTGCTTGTATGCACAATATTCATCAACATGCTTCCTGGCTTCAACTCTGGGGATACCATTTTAGTTGATCATAGTTTCAAAACAAGAAAGGGTCTGATTTCAAAAACAAAATAATACACATGCTGCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTAATCTCCTTTACAATTTGTCATGTTTTTGTGCCTATGAGACTGATATTGTACAAGGGATAGCTCCATCTTGGAAAGCTTTATTTTGTGTAAAATCTACAATGAATAAACGGCAGTTCCGTTGAAAAAAAAAAAAA]
[+] EMBL AU174150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGATGAAATTCGAAGGCCCCAGATTACATGCAAGGCTGTGAAGTATAGCTGAAACCATATCACAACCATGGCAAGCATCATCAAACATCAATTAGTGAATAGTGACTGGAGGGAGAGTACCAGTGTTAAAAACAATTTTGGTATTCTGCTTGTATGCNCAATATTCATCAACATGCTTCCTGGCTTCAACTCTGGGGATACCATTTTAGTTGATCATAGTTTCAAAACAAGAAAGGGTNTGATTTCAAAAACAAAATAATACACATGCTGCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTAATCTCCTTTACAATTTGTCATGTTTTTGTGCCTATGAGACTGATATTGTACAAGGGATAGCTCCATCTTGGAAAGCTTTATTTTGTGTAAAATCTACAATGAATAAACGGCAGTTCCGTTGAAAAAAAAA    ]




>consensus_9588#0
TTGACCTCTCCTTCCTCTCCCTCTGCTTCGTCCGTCCTGTAGCCATTGTTGACTAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGGATTGATTGGTGAGCTCGTGTTGGTATTTTTGTTTG
TTTGTAGGGAGGAGAGGTGGTTGCTGCGGCGGCGGAGGACGGCGATGGCGCGGCCGCCGG
TGCTCTCCGTCGCGCTTCCCTCCGACACGGGACGCGTGCTCAGCATCCAGTCCCACACCG
TCCAGGGATACGTTGGCAACAAATCAGCAGTCTTTCCCCTGCAACTCCTGGGCTTTGATG
TGGATCCGATAAACTCGGTACAGTTTTCTAATCATACAGGGTACCCAACATTTAGAGGAC
AGGTCCTCAACGGCAGTCAGCTGTGGGATCTTATTGAAGGGCTGGCGGAAAACGATTTAT
TGCATTATACCCATTTATTAACAGGTTATATTGGATCTGTTTCCTTTTTAACTACTGTAC
TACAAGTTGTTGACAAATTACGATCAGTCAATCCTGATCTTGTATATGTTTGTGACCCGG
TTCTAGGTGATGAAGGGAAACTATATGTCCCTCAGGATTTAATATCTGTTTATCAACAGA
AGGTTGTCCCAGTTGCTACAATGCTTACACCTAACCAATTTGAAGTTGAACTACTCACTG
GTTTAAGGATTACCTGTGAAGAAGATGGCTTGAAAGCTTGCAATGCGCTACATAGTGCTG
GACCGCGAAAGGTGGTAATAACTAGTGCACTTATTGAAGATAAGCTGCTCCTCATTGGAA
GCCACAAAAAAGCAAAGGAACAACCACCAGAACAATTTAAGATTGAGATACCCAAGATAC
CTGCATATTTCACGGGCACTGGAGATTTAACAACTGCCCTTCTACTAGGATGGAGTAATA
AATACCCTGATAACCTTGAGAGGGCGGCTGAACTGGCGGTATCCAGTTTGCAGGCACTCC
TAAGGAGAACTGTGGAAGACTATAAAAGAGCTGGGTTTGACCCCTCCACCAGCAGCCTAG
AGATCCGCTTGATTCAAAGCCAGGATGAAATTCGAAGGCCCCAGATTACATGCAAGGCTG
TGAAGTATAGCTGAAACCATATCACAACCATGGCAAGCATCATCAAACATCAATTAGTGA
ATAGTGACTGGAGGGAGAGTACCAGTGTTAAAAACAATTTTGGTATTCTGCTTGTATGCA
CAATATTCATCAACATGCTTCCTGGCTTCAACTCTGGGGATACCATTTTAGTTGATCATA
GTTTCAAAACAAGAAAGGGTCTGATTTCAAAAACAAAATAATACACATGCTGCCTTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTTTAATCTCCTTTACAATTTGTCATGTTTTTGTGC
CTATGAGACTGATATTGTACAAGGGATAGCTCCATCTTGGAAAGCTTTATTTTGTGTAAA
ATCTACAATGAATAAACGGCAGTTCCGTTGAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case