These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9590#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1568 fasta sequence [ACTACTATTGCCTGTTGCTTGTAACCATTGCCTACCACACATACATCTTCTTTACATCTGTGTCTTCTTCAACAACCAGACCTCCATTACTCCACAAAGCTGCTTTCTCCCCCTCCTTCCCTAGGTATCCTCAATGGAAGCTGCTTCCTAGATCCAGCCCCAATCCACCCTTCCTTCCAAGTCCCCATATCCACAAATCAACACACCATGTCTTCTTGTTCTTCCTCCTCTCCCCAGAAAGCCATAGATGCTAGTTATCAACTATCAACTCCATGGATCTTGTTCTTCCCAGCTTCAAAGCCCCTCCAACACCAAAGTTCAGATCTGTCCTCCTTCCCTTCACCTAGCTCTATATTAGAAGCTTGTGAGGGCTAAGATGGCCATGGAGGACAATGAATCAGGGGCAAGATGAACTCTAAGATGGCTGGCCATGGATGAAGATTGAAGCTGCTATTGGTCTATGAATCAAGGGGATGATGAACTGGATCAGACGTATCATCTTCTGTATCGCCCGCGCGCGATCTGGGGCCGCCGTCCCCGCCCCAACGGTGGCCGACGCCGCCCTCGCCCCATCCAAGGGTTGTTCCGCGTGAGCCATCCGGCGGTGAACCCTACAGCCGAGCCCATCAGGCGGCAGTTCCTGGAGCAGCTGGATTACCCTTTGCCAACTATCACTGGTTCTGCTCTGTTGGATGAGACAAACCTGATTCTTCATGATTTTTACAAGAATATATCTGACATCAGGTCTCAGATCTACAACCAGCAAGGTCTGTGACTTGCAAAGATGAATGTTGTCAAGGAACAAGCTCTATGGGAAGAAGCTGAAGAGCTCGTATGCATTTCCAAGAAGATCTTCGATTCCACTAATCTTGATAAGAAGCTGCTTTACCCCTTCCCTAGTTGGTTTAACTCAAGGGAGACTAGGAAGAAGAATTATCTAGATCTTACATCTTGGGTTAGTTTGCTTGAGACGTATGCTAATGAGAGGAGTGCTAGCCCTGAAGCTGATGGTGAGGCATATGATGTGGGTCTTCTTGATGACAAGACTGGAGACGCCAGTGCTGATCTTGACTATGAAAAGAGTGCCTGCTCTGGAGAGACAAGTGATGCTGCCTTTGATGAAGAGAGTGCTAGCCCTGGAGACGCTACCAAAGAGGCTGATATTGATGAACCGGTTGCTATCCTGGGGACGCCAATGGTGGCAAGATCTGTAGAGTGGAGGCCTATGGCTTGAGTTCTTCAGTGAAGGAAAAGTACTTGGATAAATGCTTCCTAACGTTGTCATATATTCCTGATATTGTCATGTGTCATCTAGGTATCATCTAGGAAAGTACTTGGATAAATGCTTCCTAACGTTGTCATATATTCCTGATATTGTCATGTCTCATCTAGGAGAAGTTCAGAAGCCCCTGAGGCAATCTAACATCGGCTACTTATGCCGTGATAAAAGACTTTGCATGGAAGTATTATCTATTTCAGAATCTTGTATGCAATCAAACAACTACTACTTATTATGGTCTTATGGATACCTTGCTTGCTTATCTTAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK069651 [ACTACTATTGCCTGTTGCTTGTAACCATTGCCTACCACACATACATCTTCTTTACATCTGTGTCTTCTTCAACAACCAGACCTCCATTACTCCACAAAGCTGCTTTCTCCCCCTCCTTCCCTAGGTATCCTCAATGGAAGCTGCTTCCTAGATCCAGCCCCAATCCACCCTTCCTTCCAAGTCCCCATATCCACAAATCAACACACCATGTCTTCTTGTTCTTCCTCCTCTCCCCAGAAAGCCATAGATGCTAGTTATCAACTATCAACTCCATGGATCTTGTTCTTCCCAGCTTCAAAGCCCCTCCAACACCAAAGTTCAGATCTGTCCTCCTTCCCTTCACCTAGCTCTATATTAGAAGCTTGTGAGGGCTAAGATGGCCATGGAGGACAATGAATCAGGGGCAAGATGAACTCTAAGATGGCTGGCCATGGATGAAGATTGAAGCTGCTATTGGTCTATGAATCAAGGGGATGATGAACTGGATCAGACGTATCATCTTCTGTATCGCCCGCGCGCGATCTGGGGCCGCCGTCCCCGCCCCAACGGTGGCCGACGCCGCCCTCGCCCCATCCAAGGGTTGTTCCGCGTGAGCCATCCGGCGGTGAACCCTACAGCCGAGCCCATCAGGCGGCAGTTCCTGGAGCAGCTGGATTACCCTTTGCCAACTATCACTGGTTCTGCTCTGTTGGATGAGACAAACCTGATTCTTCATGATTTTTACAAGAATATATCTGACATCAGGTCTCAGATCTACAACCAGCAAGGTCTGTGACTTGCAAAGATGAATGTTGTCAAGGAACAAGCTCTATGGGAAGAAGCTGAAGAGCTCGTATGCATTTCCAAGAAGATCTTCGATTCCACTAATCTTGATAAGAAGCTGCTTTACCCCTTCCCTAGTTGGTTTAACTCAAGGGAGACTAGGAAGAAGAATTATCTAGATCTTACATCTTGGGTTAGTTTGCTTGAGACGTATGCTAATGAGAGGAGTGCTAGCCCTGAAGCTGATGGTGAGGCATATGATGTGGGTCTTCTTGATGACAAGACTGGAGACGCCAGTGCTGATCTTGACTATGAAAAGAGTGCCTGCTCTGGAGAGACAAGTGATGCTGCCTTTGATGAAGAGAGTGCTAGCCCTGGAGACGCTACCAAAGAGGCTGATATTGATGAACCGGTTGCTATCCTGGGGACGCCAATGGTGGCAAGATCTGTAGAGTGGAGGCCTATGGCTTGAGTTCTTCAGTGAAGGAAAAGTACTTGGATAAATGCTTCCTAACGTTGTCATATATTCCTGATATTGTCATGTGTCATCTAGGTATCATCTAGGAAAGTACTTGGATAAATGCTTCCTAACGTTGTCATATATTCCTGATATTGTCATGTCTCATCTAGGAGAAGTTCAGAAGCCCCTGAGGCAATCTAACATCGGCTACTTATGCCGTGATAAAAGACTTTGCATGGAAGTATTATCTATTTCAGAATCTTGTATGCAATCAAACAACTACTACTT ] [+] EMBL OSR0746A [ CTCAATGGAAGCTGCTTCCTAGATCCAGCCCCAATCCACCCTTCCTTCCAAGTCCCCATATCCACAAATCAACACACCATGTCTTCTTGTTCTTCCTCCTCTCCCCAGAAAGCCATAGATGCTAGTTATCAACTATCAACTCCATGGATCTTGTTCTTCCCAGCTTCAAAGCCCCTCCAACACCAAAGTTCAGATCTGTCCTCCTTCCCTTCACCTAGCTCTATATTAGAAGCTTGTGAGGGCTAAGATGGCCATGGAGGACAATGAATCAGGGGCAAGATGAACTCTAAGATGGCTGGCCATGGNTGAAGATTGAAGCTGCTATTGGTCTATGAATCAAGGGGATGATGAACTGGATCAGACGTATCAT ] [+] EMBL OSR1061A [ CTCAATGGAAGCTGCTTCCTAGATCCAGCCCCAATCCACCCTTCCTTCCAAGTCCCCATATCCACAAATCAACACACCATGTCTTCTTGTTCTTCCTCCTCTCCCCAGAAAGCCATAGATGCTAGTTATCAACTATCAACTCCATGGATCTTGTTCTTCCCAGCTTCAAAGCCCCTCCAACACCAAAGTTCAGATCTGTCCTCCTTCCCTTCACCTAGCTCTATATTAGAAGCTTGTGAGGGCTAAGATGGCCATGGAGGACAATGAATCAGGGGCAAGATGAACTCTAAGATGGCTGGCCATGGATGAAGATTGAAGCTGCTATTGGTCTATGAAT ] [+] EMBL CA999510 [ GTGAGCCATCCGGCGGTGAACCCTACAGCCGAGCCCATCGGGCGGCAGTTCCTGGAGCAGCTGGATTACCCTTTACCAACTATCACTGGTTCTGCTCTGTTGGATGAGACAAACCTGATTCTTCATGATTTTTACAAGAATATATCTGACATCAGGTCTCAGATCTACAACCAGCAAGGTCTGTGACTTGCAAAGATGAATGTTGTCAAGGAACAAGCTCTATGGGAAGAAGCTGAAGAGC ] [+] EMBL AU101636 [ AATGAGAGGAGTGCTAGCCCTGAAGCTGATGGTGAGGCATATGATGTGGGTCTTCTTNATGACAAGACTGGAGACGCCAGTGCTGATCTTGACTATGAAAANAGTGCCTGCTCTGGAGAGACAAGTGATGCTGCCTTTGATGAAGAGAGTGCTAGCCCTGGAGACGCTACCAAAGAGGCTGATATTGATGAACCGATTGCTATCCTGGGGACGCCAATGGTGGCAAGATCTGTAGAGTGGAGGCCTATGGCTTGAGTTCTTCAGTGAAGGAAAAGTACTTGGATAAATGCTTCCTAACGTTGTCATATATTCCTGATATTGTCATGTGTCATCTAGGTATCATCTAGGAAAGTACTTGGATAAATGCTTCCTAACGTTGTCATATATTCCTGATATTGTCATGTCTCATCTAGGAGAAGTTCAGAAGCCCCTGAGGCAATCTAACATCGGCTACTTATGCCGTGATAAAAGACTTTGCATGGAAGTATTATCTATTTCAGAATCTTGTATGCAATCAAACAACTACTACTTATTATGGTCTTATGGATACCTTGCTTGCTTATCTTAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU184096 [ GAAAGTACTTGGATAAATGCTTCCTAACGTTGTCATATATTCCTGATATTGTCATGTNTCATNTAGGAGAAGTTCAGAAGCCCCTGAGGCAATNTAACATCGGNTACTTATGCCGTGATAAAAGACTTTGCATGGAAGTATTATNTATTTCAGAATNTTGTATGCAATCAAACAACTACTACTTATTATGGTNTTATGGATACCNTGCTTGCTTTTNTTNAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||