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Oryza sativa
cluster # 960 cluster # 960       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_960#0 length = 1164 sequences # 2  

consensusID : consensus_960#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1164
fasta sequence
                              [AGAAATCGAGGCGTCTCCTCCGATCGATCGAGATTTCGAGGCCCATGTTCCTCCGCGCACTCGCATCTCTCCTCGACCGGAGGCTCTCGGCACGCGGCGCGCAGGCGCGGCGATCGGCGGCGGCGGCGGGGACTAGGCCAGCGAAGCCACGCGCTCTCCGCACCCTCAGGGATCTCGGCGTCGGCCATGGCGCCGTAAAAGGTGCTCTTGCCTTGACGAGTTCGTTGGCTGGATTGCTGCTCGGATTCCTCTATTTCAAGCAAGATAGAGATGACTCAGCTTGGGAGTATACCAGGAAGGAGGAGGAGACCGTAAAGTGGAGGGACGTGATCGAGCCATCCGTCATGGCAAGGTTCACAAGGAAAGATGGCACCTTCGCCTATCCTGAGTACTACGGTTACCTCCGCGTTCAGATGAACGGGGGGAAACCAAACTATGACCAGAAATGTTCCGACAAGGTGGAGGAGGCCATCGTCGATGCTGATGCCGCCGACACAGACGAGGATGGCAACAACGCGGTGGATGAGCCAGCCATGAAGGCAAAATTCGAAGACTGGATGAAGGAGCATGGCCGGATATACATAACCAAGAAAGAGAAGGCTCATCGGTATGAGAATTTCAAGAAGGCTATGAAGGGCATCAACGAGTTAAACATCAAGCGCGGAATGCGAAGCCCTTTAGCTGCCCCTACCGAATTAGCGGACTACACCGATGAAGAGGTTGAGCGACTTGGTATCACTATGGCTGATGATTCAGACTGGGATGAGTACCTTGATCACATCCACACTGCGATTGCTCGGTATATGGCTACTATAAAGAGGATCAGATCTTTTGTTTTGGAAGCCAGCAATTATATTTTAATCTATGTGTTCCCGTGATAAATGCTGCTTTAGAATTAGCGAATTAGCCTTTCGATATCCAATTGGTGAAAATTGTTCTGGCTATTGGTCGTTATATTCGAGAAGCAGATACCAACTAGTTTGATCTGATATTCTGGCTAGTTGTAAGTCATCATTGCACAGCAATCATAGGCTCATAGCGAAGTAGAAACTGTACAGTAATTAGTAGATGTGAATAACACTTGTGCTGTTTGGATTTTGCCTCAGTCTTTGTAGTACCATAGTCTAAAATCCTAAACTGCAGCTCCAAATGCAAATGATCTAC]

[+] EMBL AU184563             [AGAAATCGAGGCGTCTCCTCCGATCGATCGAGATTTCGAGGCCCATGTTCCTCCGCGCACTCGCATCTCTCCTCGACCGGAGGCTCTCGGCACGCGGCGCGCAGGCGCGGCGATCGGCGGCGGCGGCGGGGACTAGGCCAGCGAAGCCACGCGCTCTCCGCACCCTCAGGGATCTCGGCGTCGGCCATGGCGCCGTAAAAGGTGCTCTTGCCTTGACGAGTTCGTTGGCTGGATTGCTGCTCGGATTCCTCTATTTCAAGCAAGATAGAGATGACTCAGCTTGGGAGTATACCAGGAAGGAGGAGGAGACCGTAAAGTGGAGGGACGTGATCGAGCCATCCGTCATGGCAAGGTTCACAAGGAAAGATGGCACCTTCGCCTATCCTGAGTACTACGGTTACCTCCGCGTTCAGATGAACGGGGGGAAACCAAACTATGACCAGAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK109158             [                                      AGGCCCATGTTCCTCCGCGCACTCGCATCTCTCCTCGACCGGAGGCTCTCGGCACGCGGCGCGCAGGCGCGGCGATCGGCGGCGGCGGCGGGGACTAGGCCAGCGAAGCCACGCGCTCTCCGCACCCTCAGGGATCTCGGCGTCGGCCATGGCGCCGTAAAAGGTGCTCTTGCCTTGACGAGTTCGTTGGCTGGATTGCTGCTCGGATTCCTCTATTTCAAGCAAGATAGAGATGACTCAGCTTGGGAGTATACCAGGAAGGAGGAGGAGACCGTAAAGTGGAGGGACGTGGTCGAGCCATCCGTCATGGCAAGGTTCACAAGGAAAGATGGCACCTTCGCCTATCCTGAGTACTACGGTTACCTCCGCGTTCAGATGAACGGGGGGAAACCAAACTATGACCAGAAATGTTCCGACAAGGTGGAGGAGGCCATCGTCGATGCTGATGCCGCCGACACAGACGAGGATGGCAACAACGCGGTGGATGAGCCAGCCATGAAGGCAAAATTCGAAGACTGGATGAAGGAGCATGGCCGGATATACATAACCAAGAAAGAGAAGGCTCATCGGTATGAGAATTTCAAGAAGGCTATGAAGGGCATCAACGAGTTAAACATCAAGCGCGGAATGCGAAGCCCTTTAGCTGCCCCTACCGAATTAGCGGACTACACCGATGAAGAGGTTGAGCGACTTGGTATCACTATGGCTGATGATTCAGACTGGGATGAGTACCTTGATCACATCCACACTGCGATTGCTCGGTATATGGCTACTATAAAGAGGATCAGATCTTTTGTTTTGGAAGCCAGCAATTATATTTTAATCTATGTGTTCCCGTGATAAATGCTGCTTTAGAATTAGCGAATTAGCCTTTCGATATCCAATTGGTGAAAATTGTTCTGGCTATTGGTCGTTATATTCGAGAAGCAGATACCAACTAGTTTGATCTGATATTCTGGCTAGTTGTAAGTCATCATTGCACAGCAATCATAGGCTCATAGCGAAGTAGAAACTGTACAGTAATTAGTAGATGTGAATAACACTTGTGCTGTTTGGATTTTGCCTCAGTCTTTGTAGTACCATAGTCTAAAATCCTAAACTGCAGCTCCAAATGCAAATGATCTAC]


>consensus_960#0 AGAAATCGAGGCGTCTCCTCCGATCGATCGAGATTTCGAGGCCCATGTTCCTCCGCGCAC TCGCATCTCTCCTCGACCGGAGGCTCTCGGCACGCGGCGCGCAGGCGCGGCGATCGGCGG CGGCGGCGGGGACTAGGCCAGCGAAGCCACGCGCTCTCCGCACCCTCAGGGATCTCGGCG TCGGCCATGGCGCCGTAAAAGGTGCTCTTGCCTTGACGAGTTCGTTGGCTGGATTGCTGC TCGGATTCCTCTATTTCAAGCAAGATAGAGATGACTCAGCTTGGGAGTATACCAGGAAGG AGGAGGAGACCGTAAAGTGGAGGGACGTGATCGAGCCATCCGTCATGGCAAGGTTCACAA GGAAAGATGGCACCTTCGCCTATCCTGAGTACTACGGTTACCTCCGCGTTCAGATGAACG GGGGGAAACCAAACTATGACCAGAAATGTTCCGACAAGGTGGAGGAGGCCATCGTCGATG CTGATGCCGCCGACACAGACGAGGATGGCAACAACGCGGTGGATGAGCCAGCCATGAAGG CAAAATTCGAAGACTGGATGAAGGAGCATGGCCGGATATACATAACCAAGAAAGAGAAGG CTCATCGGTATGAGAATTTCAAGAAGGCTATGAAGGGCATCAACGAGTTAAACATCAAGC GCGGAATGCGAAGCCCTTTAGCTGCCCCTACCGAATTAGCGGACTACACCGATGAAGAGG TTGAGCGACTTGGTATCACTATGGCTGATGATTCAGACTGGGATGAGTACCTTGATCACA TCCACACTGCGATTGCTCGGTATATGGCTACTATAAAGAGGATCAGATCTTTTGTTTTGG AAGCCAGCAATTATATTTTAATCTATGTGTTCCCGTGATAAATGCTGCTTTAGAATTAGC GAATTAGCCTTTCGATATCCAATTGGTGAAAATTGTTCTGGCTATTGGTCGTTATATTCG AGAAGCAGATACCAACTAGTTTGATCTGATATTCTGGCTAGTTGTAAGTCATCATTGCAC AGCAATCATAGGCTCATAGCGAAGTAGAAACTGTACAGTAATTAGTAGATGTGAATAACA CTTGTGCTGTTTGGATTTTGCCTCAGTCTTTGTAGTACCATAGTCTAAAATCCTAAACTG CAGCTCCAAATGCAAATGATCTAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)