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Oryza sativa
cluster # 9601 cluster # 9601       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9601#0 length = 1957 sequences # 4  
consensus_9601#1 length = 504 sequences # 1  
consensus_9601#2 length = 423 sequences # 1  

consensusID : consensus_9601#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1957
fasta sequence
                              [CCTTGCTGCTCCGCCCGCGGTGACGCACCAGGCCCACGGCGGAGACGGCCGCCATCGCCATCGCCGCCGCCGCCGCCGCGTGAGCTACCTGCGTCGGCTTTGGTACGAGAGCAGAGCTTTCACCACTCGTTTTAGCTGGGAAGACGAGCGGGCAACAGAATGGAAAGTTCATCAGCTAGGAGCAACACCTCAGAGAGGAATCGCGTAGATTATGCAAGAAGTGTGTCCATGGATTCTGCAGGTCATTCTTTAGGTGCTAGGTCTGCCTCAATCCTCAGTAGGAGAAGCAGCAGGCAGGGTTCAAGGGGATCCATCAGCCTCTCCCGTGAGATGGGGGACTCGATACTGAGCTCGATGAGGCATTCGCTTCAATCAGCAGACCAGTTGCTAGGTGATGTAGATGGCTCAGTTCTTGCTCAGGTCATTGACAGTGGTGACCGAGGGCTAGCATTTGAAAACGACGTTGACGAAGAGGAAGAGAATAATGTGGAGGATCATCAGGCTGTTCCTCTCCCAGATGATACATCAATGCGGATTCATGGCAGAAGCTCTCAAGGCACAAGTGTGGTGGCACCCGTATCTGCGATGAAGCCAAAAGATACTAATGTTAACGGCCCAGCCAGTTCATCTATCAAGGTTGAACCATATAAGCTTTCATGGATGCAAGATTATGCTTCTTACCTGATCCATTTAGCCGTATTTGGATTTCTTGGGGTATTTACAAGGTATGGGCTCCAAAAACTGTTTGGCCCTAGCTGCCTGGCACTCACCTCAGACCAAAGCCCACTGTACCTTGACCTTCCATCTAACATGCTAGGATCTTTCCTGATGGGCTGGTTTGGGATCATCTTCAAGGCTGATATACGTCACATATCTGATCATCTCATTGTCGGAATCACGACAGGCTACATGGGAAGCCTTACCACCTTCAGTGGGTGGAACCAGAAAATGGTTGGCCTATCTTCCAAAGGCCACTGGGTATATGCTGTAGCTGGCATAGTACTAGGAATGTTTATCGTCAATGAGTCCATCACGGTGGGTGCGGAAACTGGTGAGCGACTGCGAGGATGGATCCTGAAATGCATCATAGAGAAGAATTCAATAGGAAGCAAATGCGGCTGGGAGGACTGGAGGGTGGACACCAGGACCAAACATTATGCGCTTCTTGGAGTTATGGTGATTCTGATGTCTTTGATATGGATCCTGAGCATTGTGCTGGCCATAGTGAAGGTGCATAGCCTTGGCCATGGCGCGGTTCTGTGGCTGGGTTGCTCGGTAGCACCTCCCGGTGTTTGGCTTCGCTGGTACTTGGCGAGGCTAAATGGCGGAGGAATTGGAATCGGCAAGCGGAGACACCTCAAATGGCTTCCCGTTGGAACACTTGCAGCCAATGTTCTTGCAGCAGCAATCATGGCAGCTCTTGCTGTCACGGCTAAAGCGGAAAATACAAGACGATTGACTACTGTTCTTAATGGCATACAGCTCGGTTTCCTCGGTTGCTTGAGCACAGTATCAACTTTTGCTGCTGAAGTTTACACCATGAGAAGAAGTGGTCAGATTGCAAGGGCATTTGTATATGCTGCAGCCACCTTCGTTCTCTCATTTGTGCTAGGAACTCTGATATACTCAGTGCCGGTGTGGGTAGAGCATTACTGATAGCATCGTCACCAGTTGCAGAATTGGAACCTTTGATGGTTTAGCAATTTGCTAATCCAAGTAGCTTAGATAATACAATCTAGAAACAAGCTTGCAAAGAAAAGCTTGGAACGCGGGAATTTCATTTCAACTGCCACGACGGAATTTAGTACTGCACCATAGCAAAAGAATGCATTTTTTCTTGTTGTAAAGTGAGTATGTATACAGCATTTCTGGAATTGGAGAGTTGGGAATACATACAGTTGTAGCATGAAGAATATTGTACAAACAAAATTTTGAAGTGCAAAAAC-AATGTCTATTT]

[+] EMBL CB666769             [CCTTGCTGCTCCGCCCGCGGTGACGCACCAGGCCCACGGCGGAGACGGCCGCCATCGCCATCGCCGCCGCCGCCGCCGCGTGAGCTACCTGCGTCGGCTTTGGTACGAGAGCAGAGCTTTCACCACTCGTTTTAGCTGGGAAGACGAGCGGGCAACAGAATGGAAAGTTCATCAGCTAGGAGCAACACCTCAGAGAGGAATCGCGTAGATTATGCAAGAAGTGTGTCCATGGATTCTGCAGGTCATTCTTTAGGTGCTAGGTCTGCCTCAATCCTCAGTAGGAGAAGCAGCAGGCAGGGTTCAAGGGGATCCATCAGCCTCTCCCGTGAGATGGGGGACTCGATACTGAGCTCGATGAGGCATTCGCTTCAATCAGCAGACCAGTTGCTAGGTGATGTAGATGGCTCAGTTCTTGCTCAGGTCATTGACAGTGGTGACCGAGGGCTAGCATTTGAAAACGACGTTGACGAAGAGGAAGAGAATAATGTGGAGGATCATCAGGCTGTTCCTCTCCCAGATGATACATCAATGCGGATTCATGGCAGAAGCTCTCAAGGCACAAGTGTGGTGGCACCCGTATCTGCGATGAAGCCAAAAGATACTAATGTTAACGGCCCAGCCAGTTCATCTATCAAGGTTGAACCATATAAGCTTTCATGGATGCAAGATTATGCTTCTTACCTGATCCATTTAGCCGTATTTGGATTTCTTGGGGTATTTACAAGGTATGGGCTCCAAAAACTGTTTGGCCCTAGCTGCCTGGCACTCACCTCAGAACGAAGCCCACTGTACCTTGACCTTCCATCTAACATGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK103373             [                                                                                                                                                          ACAGAATGGAAAGTTCATCAGCTAGGAGCAACACCTCAGAGAGGAATCGCGTAGATTATGCAAGAAGTGTGTCCATGGATTCTGCAGGTCATTCTTTAGGTGCTAGGTCTGCCTCAATCCTCAGTAGGAGAAGCAGCAGGCAGGGTTCAAGGGGATCCATCAGCCTCTCCCGTGAGATGGGGGACTCGATACTGAGCTCGATGAGGCATTCGCTTCAATCAGCAGACCAGTTGCTAGGTGATGTAGATGGCTCAGTTCTTGCTCAGGTCATTGACAGTGGTGACCGAGGGCTAGCATTTGAAAACGACGTTGACGAAGAGGAAGAGAATAATGTGGAGGATCATCAGGCTGTTCCTCTCCCAGATGATACATCAATGCGGATTCATGGCAGAAGCTCTCAAGGCACAAGTGTGGTGGCACCCGTATCTGCGATGAAGCCAAAAGATACTAATGTTAACGGCCCAGCCAGTTCATCTATCAAGGTTGAACCATATAAGCTTTCATGGATGCAAGATTATGCTTCTTACCTGATCCATTTAGCCGTATTTGGATTTCTTGGGGTATTTACAAGGTATGGGCTCCAAAAACTGTTTGGCCCTAGCTGCCTGGCACTCACCTCAGACCAAAGCCCACTGTACCTTGACCTTCCATCTAACATGCTAGGATCTTTCCTGATGGGCTGGTTTGGGATCATCTTCAAGGCTGATATACGTCACATATCTGATCATCTCATTGTCGGAATCACGACAGGCTACATGGGAAGCCTTACCACCTTCAGTGGGTGGAACCAGAAAATGGTTGGCCTATCTTCCAAAGGCCACTGGGTATATGCTGTAGCTGGCATAGTACTAGGAATGTTTATCGTCAATGAGTCCATCACGGTGGGTGCGGAAACTGGTGAGCGACTGCGAGGATGGATCCTGAAATGCATCATAGAGAAGAATTCAATAGGAAGCAAATGCGGCTGGGAGGACTGGAGGGTGGACACCAGGACCAAACATTATGCGCTTCTTGGAGTTATGGTGATTCTGATGTCTTTGATATGGATCCTGAGCATTGTGCTGGCCATAGTGAAGGTGCATAGCCTTGGCCATGGCGCGGTTCTGTGGCTGGGTTGCTCGGTAGCACCTCCCGGTGTTTGGCTTCGCTGGTACTTGGCGAGGCTAAATGGCGGAGGAATTGGAATCGGCAAGCGGAGACACCTCAAATGGCTTCCCGTTGGAACACTTGCAGCCAATGTTCTTGCAGCAGCAATCATGGCAGCTCTTGCTGTCACGGCTAAAGCGGAAAATACAAGACGATTGACTACTGTTCTTAATGGCATACAGCTCGGTTTCCTCGGTTGCTTGAGCACAGTATCAACTTTTGCTGCTGAAGTTTACACCATGAGAAGAAGTGGTCAGATTGCAAGGGCATTTGTATATGCTGCAGCCACCTTCGTTCTCTCATTTGTGCTAGGAACTCTGATATACTCAGTGCCGGTGTGGGTAGAGCATTACTGATAGCATCGTCACCAGTTGCAGAATTGGAACCTTTGATGGTTTAGCAATTTGCTAATCCAAGTAGCTTAGATAATACAATCTAGAAACAAGCTTGCAAAGAAAAGCTTGGAACGCGGGAATTTCATTTCAACTGCCACGACGGAATTTAGTACTGCACCATAGCAAAAGAATGCATTTTTTCTTGTTGTAAAGTGAGTATGTATACAGCATTTCTGGAATTGGAGAGTTGGGAATACATACAGTTGTAGCATGAAGAATATTGTACAAACAAAATTTTGAAGTGCAAAAAC AATGT      ]
[+] EMBL CB623422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cgcacccTTCAACCATATAAGCTTTCATGGATGCAAGATTATGCTTCTTACCTGATCCATTTAGCCGTATTTGGATTTCTTGGGGTATTTACAAGGTATGGGCTCCAAAAACTGTTTGGCCCTAGCTGCCTGGCACTCACCTCAGACCAAAGCCCACTGTACCTTGACCTTCCATCTAACATGCTAGGATCTTTCCTGATGGGCTGGTTTGGGATCATCTTCAAGGCTGATATACGTCACATATCTGATCATCTCATTGTCGGAATCACTACAGGCTACATGGGAAGCCTTACCACCTTCAGTGGGTGGAACCAGAAAATGGTTGGCCTATCTTCCAAAGGCCACTGGGTATATGCTGTAGCTGGCATAGTACTAGGAATGTTTATCGTCAATGAGTCCATCACGGTGGGTGCGGAAACTGGTGAGCGACTGCGAGGATGGATCCTGAAATGCATCATAGAGAAGAATTCAATAGGAAGCAAATGCGGCTGGGAGGACTGGAGGGTGGACACCAGGACCAAACATTATGCGCTTCTTGGAGTTATGGTGATTCTGATGTCTTTGATATGGATCCTGAGCATTGTGCTGGCCATAGTGAAGGTGCATAGCCTTGGCCATGGCGCGGTTCTGTGGCTGGGTTGCTCGGTAGCACCTCCCGGTGTTTGGCTTCGCTGGTACTTGGCGAGGCTAAATGGCGGAGGAATTGGAATCGGCAAGCGGAGACACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB666770             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCGCTTCTTGGAGTTATGGTGATTCTGATGTCTTTGATATGGATCNTGAGCATTGTGCTGGCCATAGTGAAGGTGCATAGCCTTGGCCATGGCGCGGTTCTGTGGCTGGGTTGCTCGGTAGCACCTCCCGGTGTTTGGCTTCGCTGGTACTTGGCGAGGCTAAATGGCGGAGGAATTGGAATCGGCAAGCGGAGACACCTCAAATGGCTTCCCGTTGGAACACTTGCAGCCAATGTTCTTGCAGCAGCAATCATGGCAGCTCTTGCTGTCACGGCTAAAGCGGAAAATACAAGACGATTGACTACTGTTCTTAATGGCATACAGCTCGGTTTCCTCGGTTGCTTGAGCACAGTATCAACTTTTGCTGCTGAAGTTTACACCATGAGAAGAAGTGGTCAGATTGCAAGGGCATTTGTATATGCTGCAGCCACCTTCGTTCTCTCATTTGTGCTAGGAACTCTGATATACTCAGTGCCGGTGTGGGTAGAGCATTACTGATAGCATCGTCACCAGTTGCAGAATTGGAACCTTTGATGGTTTAGCAATTTGCTAATCCAAGTAGCTTAGATAATACAATCTAGAAACAAGCTTGCAAAGAAAAGCTTGGAACGCGGGAATTTCATTTCAACTGCCACGACGGAATTTAGTACTGCACCATAGCAAAAGAATGCA TTTTTCTTGTTGTAAAGTGAGTATGTATACAGCATTTCTGGAATTGGAGAGTTGGGAATACATACAGTTGTAGCATGAAGAATATTGTACAAACAAAATTTTGAAGTGCAAAAACGAATGTCTATTT]


>consensus_9601#0 CCTTGCTGCTCCGCCCGCGGTGACGCACCAGGCCCACGGCGGAGACGGCCGCCATCGCCA TCGCCGCCGCCGCCGCCGCGTGAGCTACCTGCGTCGGCTTTGGTACGAGAGCAGAGCTTT CACCACTCGTTTTAGCTGGGAAGACGAGCGGGCAACAGAATGGAAAGTTCATCAGCTAGG AGCAACACCTCAGAGAGGAATCGCGTAGATTATGCAAGAAGTGTGTCCATGGATTCTGCA GGTCATTCTTTAGGTGCTAGGTCTGCCTCAATCCTCAGTAGGAGAAGCAGCAGGCAGGGT TCAAGGGGATCCATCAGCCTCTCCCGTGAGATGGGGGACTCGATACTGAGCTCGATGAGG CATTCGCTTCAATCAGCAGACCAGTTGCTAGGTGATGTAGATGGCTCAGTTCTTGCTCAG GTCATTGACAGTGGTGACCGAGGGCTAGCATTTGAAAACGACGTTGACGAAGAGGAAGAG AATAATGTGGAGGATCATCAGGCTGTTCCTCTCCCAGATGATACATCAATGCGGATTCAT GGCAGAAGCTCTCAAGGCACAAGTGTGGTGGCACCCGTATCTGCGATGAAGCCAAAAGAT ACTAATGTTAACGGCCCAGCCAGTTCATCTATCAAGGTTGAACCATATAAGCTTTCATGG ATGCAAGATTATGCTTCTTACCTGATCCATTTAGCCGTATTTGGATTTCTTGGGGTATTT ACAAGGTATGGGCTCCAAAAACTGTTTGGCCCTAGCTGCCTGGCACTCACCTCAGACCAA AGCCCACTGTACCTTGACCTTCCATCTAACATGCTAGGATCTTTCCTGATGGGCTGGTTT GGGATCATCTTCAAGGCTGATATACGTCACATATCTGATCATCTCATTGTCGGAATCACG ACAGGCTACATGGGAAGCCTTACCACCTTCAGTGGGTGGAACCAGAAAATGGTTGGCCTA TCTTCCAAAGGCCACTGGGTATATGCTGTAGCTGGCATAGTACTAGGAATGTTTATCGTC AATGAGTCCATCACGGTGGGTGCGGAAACTGGTGAGCGACTGCGAGGATGGATCCTGAAA TGCATCATAGAGAAGAATTCAATAGGAAGCAAATGCGGCTGGGAGGACTGGAGGGTGGAC ACCAGGACCAAACATTATGCGCTTCTTGGAGTTATGGTGATTCTGATGTCTTTGATATGG ATCCTGAGCATTGTGCTGGCCATAGTGAAGGTGCATAGCCTTGGCCATGGCGCGGTTCTG TGGCTGGGTTGCTCGGTAGCACCTCCCGGTGTTTGGCTTCGCTGGTACTTGGCGAGGCTA AATGGCGGAGGAATTGGAATCGGCAAGCGGAGACACCTCAAATGGCTTCCCGTTGGAACA CTTGCAGCCAATGTTCTTGCAGCAGCAATCATGGCAGCTCTTGCTGTCACGGCTAAAGCG GAAAATACAAGACGATTGACTACTGTTCTTAATGGCATACAGCTCGGTTTCCTCGGTTGC TTGAGCACAGTATCAACTTTTGCTGCTGAAGTTTACACCATGAGAAGAAGTGGTCAGATT GCAAGGGCATTTGTATATGCTGCAGCCACCTTCGTTCTCTCATTTGTGCTAGGAACTCTG ATATACTCAGTGCCGGTGTGGGTAGAGCATTACTGATAGCATCGTCACCAGTTGCAGAAT TGGAACCTTTGATGGTTTAGCAATTTGCTAATCCAAGTAGCTTAGATAATACAATCTAGA AACAAGCTTGCAAAGAAAAGCTTGGAACGCGGGAATTTCATTTCAACTGCCACGACGGAA TTTAGTACTGCACCATAGCAAAAGAATGCATTTTTTCTTGTTGTAAAGTGAGTATGTATA CAGCATTTCTGGAATTGGAGAGTTGGGAATACATACAGTTGTAGCATGAAGAATATTGTA CAAACAAAATTTTGAAGTGCAAAAACAATGTCTATTT



consensusID : consensus_9601#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 504
fasta sequence
                              [NTAATNCGGCACGANANCTNTCNTGGNANCGCTTGCTGTCACGGNTGNAGNGGAAAATACAANACNATTGACTNCTGTTCTTAATGGGATACAGCTCGGTTTCCTCGGTAGNTTGAGCNCNCTANCACCTCTTGNNGCNGATNTTTACANCATGANAAAAATTGGTCAGATTNCNNGGGCATTTGTATATGCTGCAACCTCCTNCNTTCTCNCNTTTGTGCGAGGAANTCTNATATACTCNCTGCCCGTGTGGGTAGAACATTACTGATAACATCGTCACANTNGCAGAATTGGAACCTNAGANGGTNTAACNTTTTGCTCCTCCNAGTANCTNNGATTATACAACCNACAAACGTGCNTGCAAAGAAAATCTTGGAGCGCNGGAATGTCATTTCTNCTGCCACGACGGAATTTACTACTGGCNCCGTNNCAAAANAATGCNTGTTTCTTGTTGTAAAATGAGTATGTATACAGCATTNCTGGAATTGGAGAGTTGGGAATACG]

[+] EMBL BE228809             [NTAATNCGGCACGANANCTNTCNTGGNANCGCTTGCTGTCACGGNTGNAGNGGAAAATACAANACNATTGACTNCTGTTCTTAATGGGATACAGCTCGGTTTCCTCGGTAGNTTGAGCNCNCTANCACCTCTTGNNGCNGATNTTTACANCATGANAAAAATTGGTCAGATTNCNNGGGCATTTGTATATGCTGCAACCTCCTNCNTTCTCNCNTTTGTGCGAGGAANTCTNATATACTCNCTGCCCGTGTGGGTAGAACATTACTGATAACATCGTCACANTNGCAGAATTGGAACCTNAGANGGTNTAACNTTTTGCTCCTCCNAGTANCTNNGATTATACAACCNACAAACGTGCNTGCAAAGAAAATCTTGGAGCGCNGGAATGTCATTTCTNCTGCCACGACGGAATTTACTACTGGCNCCGTNNCAAAANAATGCNTGTTTCTTGTTGTAAAATGAGTATGTATACAGCATTNCTGGAATTGGAGAGTTGGGAATACG]


>consensus_9601#1 NTAATNCGGCACGANANCTNTCNTGGNANCGCTTGCTGTCACGGNTGNAGNGGAAAATAC AANACNATTGACTNCTGTTCTTAATGGGATACAGCTCGGTTTCCTCGGTAGNTTGAGCNC NCTANCACCTCTTGNNGCNGATNTTTACANCATGANAAAAATTGGTCAGATTNCNNGGGC ATTTGTATATGCTGCAACCTCCTNCNTTCTCNCNTTTGTGCGAGGAANTCTNATATACTC NCTGCCCGTGTGGGTAGAACATTACTGATAACATCGTCACANTNGCAGAATTGGAACCTN AGANGGTNTAACNTTTTGCTCCTCCNAGTANCTNNGATTATACAACCNACAAACGTGCNT GCAAAGAAAATCTTGGAGCGCNGGAATGTCATTTCTNCTGCCACGACGGAATTTACTACT GGCNCCGTNNCAAAANAATGCNTGTTTCTTGTTGTAAAATGAGTATGTATACAGCATTNC TGGAATTGGAGAGTTGGGAATACG



consensusID : consensus_9601#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 423
fasta sequence
                              [TGCTGCTCCGCCCGCGGTGACNACCAGGCCCACGGCGGAGACGGCCGCCATCGCCATCGCCGCCGCCGCCGCCGCGTGAGCTACCTGCGTCGGCTTTGAGCTTTCACCACTCGTTTTAGCTGGGAAGACGAGCGGGCAACAGAATGGAAAGTTCATCAGCTAGGAGCAACACCTCAGAGAGGAATCGCGTAGATTATGCAAGAAGTGTGTCCATGGATTCTGCAGGTCATTCTTTAGGTGCTAGGTCTGCCTCAATCCTCAGTAGGAGAAGCAGCAGGCAGGGTTCAAGGGGATCCATCAGCCTCTCCCGTGAGATGGGGGACTCGATACTGAGCTCGATGANGCATTCGCTTCAATCAGCAGACCAGTTGCTANGTGATGTAGATGGCTCAGTTCTTGCTCANGTCATTGAAAAGTGGTGAC]

[+] EMBL AU163557             [TGCTGCTCCGCCCGCGGTGACNACCAGGCCCACGGCGGAGACGGCCGCCATCGCCATCGCCGCCGCCGCCGCCGCGTGAGCTACCTGCGTCGGCTTTGAGCTTTCACCACTCGTTTTAGCTGGGAAGACGAGCGGGCAACAGAATGGAAAGTTCATCAGCTAGGAGCAACACCTCAGAGAGGAATCGCGTAGATTATGCAAGAAGTGTGTCCATGGATTCTGCAGGTCATTCTTTAGGTGCTAGGTCTGCCTCAATCCTCAGTAGGAGAAGCAGCAGGCAGGGTTCAAGGGGATCCATCAGCCTCTCCCGTGAGATGGGGGACTCGATACTGAGCTCGATGANGCATTCGCTTCAATCAGCAGACCAGTTGCTANGTGATGTAGATGGCTCAGTTCTTGCTCANGTCATTGAAAAGTGGTGAC]


>consensus_9601#2 TGCTGCTCCGCCCGCGGTGACNACCAGGCCCACGGCGGAGACGGCCGCCATCGCCATCGC CGCCGCCGCCGCCGCGTGAGCTACCTGCGTCGGCTTTGAGCTTTCACCACTCGTTTTAGC TGGGAAGACGAGCGGGCAACAGAATGGAAAGTTCATCAGCTAGGAGCAACACCTCAGAGA GGAATCGCGTAGATTATGCAAGAAGTGTGTCCATGGATTCTGCAGGTCATTCTTTAGGTG CTAGGTCTGCCTCAATCCTCAGTAGGAGAAGCAGCAGGCAGGGTTCAAGGGGATCCATCA GCCTCTCCCGTGAGATGGGGGACTCGATACTGAGCTCGATGANGCATTCGCTTCAATCAG CAGACCAGTTGCTANGTGATGTAGATGGCTCAGTTCTTGCTCANGTCATTGAAAAGTGGT GAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9601#0      ------CCTTGCTGCTCCGCCCGCGGTGACGCACCAGGCCCACGGCGGAGACGGCCGCCA 54
consensus_9601#2      ---------TGCTGCTCCGCCCGCGGTGACN-ACCAGGCCCACGGCGGAGACGGCCGCCA 50
consensus_9601#1      NTAATNCGGCACGANANCTNTCNTGGNANCG-CTTGCTGTCACGGNTGNAGNGGAAAATA 59
                                 *     *   *  **   *          *****  *    **     *

consensus_9601#0      TCGCCATCGCCGCCGCCGCCGCCGCGTGAGCTACCTGCGTCGGCTTTGGTACGAGAGCAG 114
consensus_9601#2      TCGCCATCGCCGCCGCCGCCGCCGCGTGAGCTACCTGCGTCGGCTTTG------------ 98
consensus_9601#1      -CAANACNATTGACTNCTGTTCTTAATGGGATAC--AGCTCGGTTTCCTCGGTAGNTTGA 116
                       *   *     * *  *    *    ** * ***     **** **              

consensus_9601#0      AGCTTTCACCACTCGTTTTAGCTGGGAAGACGAGCGGGCAACAGAATGG--AAAGTTCAT 172
consensus_9601#2      AGCTTTCACCACTCGTTTTAGCTGGGAAGACGAGCGGGCAACAGAATGG--AAAGTTCAT 156
consensus_9601#1      GCNCNCTANCACCTCTTGNNGCNGATNTTTACANCATGANAAAAATTGGTCAGATTNCNN 176
                             * ***   **   ** *        * *  *  * * * ***  * * * *  

consensus_9601#0      CAGC-----TAGGAGCAACACCTCAGAGAGGAATCGCGTAGATTATGCAAGAAGTGTGTC 227
consensus_9601#2      CAGC-----TAGGAGCAACACCTCAGAGAGGAATCGCGTAGATTATGCAAGAAGTGTGTC 211
consensus_9601#1      GGGCATTTGTATATGCTGCAACCTCCTNCNTTCTCNCNT---TTGTGCGAGGAANTCTNA 233
                        **     **   **  ** *           ** * *   ** *** ** *       

consensus_9601#0      CATGGATTCTGCAGGTCATTCTTTAGGTGCTAGGTCTGCCTCAATCC--TCAGTAGGAGA 285
consensus_9601#2      CATGGATTCTGCAGGTCATTCTTTAGGTGCTAGGTCTGCCTCAATCC--TCAGTAGGAGA 269
consensus_9601#1      TATACTCNCTGCCCGT-GTGGGTAGAACATTACTGATAACATCGTCACANTNGCAGAATT 292
                       **     ****  **  *   *       **    *  *    **      * ** *  

consensus_9601#0      AGCAGCAGGCAGGGTTCAAGGGGATCCATCAGCCTCTCCCGTGAGATGGGGGACTCGATA 345
consensus_9601#2      AGCAGCAGGCAGGGTTCAAGGGGATCCATCAGCCTCTCCCGTGAGATGGGGGACTCGATA 329
consensus_9601#1      GGAACCTNAGANGGTNTAACNTTTTGCTCCTCCNAGTANCTNNGATTATACAACCNACAA 352
                       * * *    * ***  **     * *  *  *   *  *      *     **     *

consensus_9601#0      CTGAGCTCGATGAGGCATTCGCTTCAATCAGCAGACCAGTTGCTAGGTGATGTAGATGGC 405
consensus_9601#2      CTGAGCTCGATGANGCATTCGCTTCAATCAGCAGACCAGTTGCTANGTGATGTAGATGGC 389
consensus_9601#1      ACGTGCNTGCAAAGAAAATCTTGGAGCGCNGGAATGTCATTTCTNC-TGCCACGACGGAA 411
                        * **  *   *   * **        * * *      ** **   **        *  

consensus_9601#0      TCAGTTCTTGCTCAGGTCATTGACA-GTGGTGACCGAGGGCTAGCATTTGAAAACGACGT 464
consensus_9601#2      TCAGTTCTTGCTCANGTCATTGAAAAGTGGTGAC-------------------------- 423
consensus_9601#1      TTTACTACTGGCNCCGTNNCAAAANAATGCNTGTTTCTTGTTGTAAAATGAGTATGTATA 471
                      *    *  **     **     *    **                               

consensus_9601#0      TGACGAAGAGGAAGAGAATAATGTGGAGGATCATCAGGCTGTTCCTCTCCCAGATGATAC 524
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      CAGCATTNCTGGAATTGGAGAGTTGGGAATACG--------------------------- 504
                                                                                  

consensus_9601#0      ATCAATGCGGATTCATGGCAGAAGCTCTCAAGGCACAAGTGTGGTGGCACCCGTATCTGC 584
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      GATGAAGCCAAAAGATACTAATGTTAACGGCCCAGCCAGTTCATCTATCAAGGTTGAACC 644
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      ATATAAGCTTTCATGGATGCAAGATTATGCTTCTTACCTGATCCATTTAGCCGTATTTGG 704
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      ATTTCTTGGGGTATTTACAAGGTATGGGCTCCAAAAACTGTTTGGCCCTAGCTGCCTGGC 764
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      ACTCACCTCAGACCAAAGCCCACTGTACCTTGACCTTCCATCTAACATGCTAGGATCTTT 824
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      CCTGATGGGCTGGTTTGGGATCATCTTCAAGGCTGATATACGTCACATATCTGATCATCT 884
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      CATTGTCGGAATCACGACAGGCTACATGGGAAGCCTTACCACCTTCAGTGGGTGGAACCA 944
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      GAAAATGGTTGGCCTATCTTCCAAAGGCCACTGGGTATATGCTGTAGCTGGCATAGTACT 1004
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      AGGAATGTTTATCGTCAATGAGTCCATCACGGTGGGTGCGGAAACTGGTGAGCGACTGCG 1064
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      AGGATGGATCCTGAAATGCATCATAGAGAAGAATTCAATAGGAAGCAAATGCGGCTGGGA 1124
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      GGACTGGAGGGTGGACACCAGGACCAAACATTATGCGCTTCTTGGAGTTATGGTGATTCT 1184
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      GATGTCTTTGATATGGATCCTGAGCATTGTGCTGGCCATAGTGAAGGTGCATAGCCTTGG 1244
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      CCATGGCGCGGTTCTGTGGCTGGGTTGCTCGGTAGCACCTCCCGGTGTTTGGCTTCGCTG 1304
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      GTACTTGGCGAGGCTAAATGGCGGAGGAATTGGAATCGGCAAGCGGAGACACCTCAAATG 1364
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      GCTTCCCGTTGGAACACTTGCAGCCAATGTTCTTGCAGCAGCAATCATGGCAGCTCTTGC 1424
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      TGTCACGGCTAAAGCGGAAAATACAAGACGATTGACTACTGTTCTTAATGGCATACAGCT 1484
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      CGGTTTCCTCGGTTGCTTGAGCACAGTATCAACTTTTGCTGCTGAAGTTTACACCATGAG 1544
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      AAGAAGTGGTCAGATTGCAAGGGCATTTGTATATGCTGCAGCCACCTTCGTTCTCTCATT 1604
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      TGTGCTAGGAACTCTGATATACTCAGTGCCGGTGTGGGTAGAGCATTACTGATAGCATCG 1664
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      TCACCAGTTGCAGAATTGGAACCTTTGATGGTTTAGCAATTTGCTAATCCAAGTAGCTTA 1724
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      GATAATACAATCTAGAAACAAGCTTGCAAAGAAAAGCTTGGAACGCGGGAATTTCATTTC 1784
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      AACTGCCACGACGGAATTTAGTACTGCACCATAGCAAAAGAATGCATTTTTTCTTGTTGT 1844
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      AAAGTGAGTATGTATACAGCATTTCTGGAATTGGAGAGTTGGGAATACATACAGTTGTAG 1904
consensus_9601#2      ------------------------------------------------------------
consensus_9601#1      ------------------------------------------------------------
                                                                                  

consensus_9601#0      CATGAAGAATATTGTACAAACAAAATTTTGAAGTGCAAAAACAATGTCTATTT 1957
consensus_9601#2      -----------------------------------------------------
consensus_9601#1      -----------------------------------------------------
                                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)