These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9602#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1156 fasta sequence [TTAATTTCATGGACACAACGACGACCATGGCGCCTCTCCCTCTCCTCACCACGACGTCTCTGCTGCTCTTCTTCTTCCTCGCGTCGTCGTTCGCCGCCGACGTCGTCGTCGCGGGCGGCGGCGGCGGCGGCGGCGGCTACGACGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGGCGGAGCCAAGATGCCGCACGTGAACCACGGCAGGTACAAGTGCGGGCCGTGGGTGGACGGGCACGCGACGTTCTACGGCGGGCGCGACGCGTCGGGCACGACGGAGGGCGGCGCGTGCGGGTACAAGGACGCCGACGGGTACGGCGCGATGACGGCGGCGGTGAGCCCCGCCCTGTTCGACAACGGCGCCGGGTGCGGCGCGTGCTACGAGCTCAAGGGGGATTCCGGGAAGACCGTCGTGGTGACGGCCACCAACCAGGCGCCGCCGCCAGTGAACGGGATGAAGGGCGAGCACTTCGACCTCACCATGCCGGCGTTCCTCTCCATCGCCGAGGAGAAGCTCGGCGTCGTGCCCGTCTCCTACCGAAAGGTGGCGTGCGTGAGGCAGGGCGGGATAAAGTACACGATAACGGGGAACCCGTCGTACAACATGGTGATGGTGAAGAACGTGGGCGGCGCGGGGGACGTGGTGAAGCTGACGGTGAAGGGGACCAAGCGGGTGAAGTGGACGCCGCTGCAGCGCAGCTGGGGCCAGCTCTGGAAGACGGAGGCCAACCTCACCGGCGAGTCGCTCACCTTCCGGGTCATGACCGGCGACCACCGCAAGGCCACCTCCTGGCGCGTCGCCCCCCGCGACTGGACCTACGACAACACCTACCAGGCCAAGAAGAACTTCTAGCTGATCGATTTTTTTCAACTTATTTACTTATAATATTTTTACCTCTCCCTCC-GTTCTCTCCCTACTTAATTGATGAATTTTTGGAAGTGAAAACTAATTAACACTGAATTTTTTTCTTACGAATTAAAAATCTGCGTATTTACTAATTTGAGTTTGAAAGAATTCGTTGATAGTGATATTTGATGGATATTCATGTAAGCTTTGGAATCTTAAATTTTGATGTACTGGTCGAAAATGCCATTAGCATAGCATTTATTCTGTTTTTATTATTATTA] [+] EMBL AK071328 [TTAATTTCATGGACACAACGACGACCATGGCGCCTCTCCCTCTCCTCACCACGACGTCTCTGCTGCTCTTCTTCTTCCTCGCGTCGTCGTTCGCCGCCGACGTCGTCGTCGCGGGCGGCGGCGGCGGCGGCGGCGGCTACGACGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGGCGGAGCCAAGATGCCGCACGTGAACCACGGCAGGTACAAGTGCGGGCCGTGGGTGGACGGGCACGCGACGTTCTACGGCGGGCGCGACGCGTCGGGCACGACGGAGGGCGGCGCGTGCGGGTACAAGGACGCCGACGGGTACGGCGCGATGACGGCGGCGGTGAGCCCCGCCCTGTTCGACAACGGCGCCGGGTGCGGCGCGTGCTACGAGCTCAAGGGGGATTCCGGGAAGACCGTCGTGGTGACGGCCACCAACCAGGCGCCGCCGCCAGTGAACGGGATGAAGGGCGAGCACTTCGACCTCACCATGCCGGCGTTCCTCTCCATCGCCGAGGAGAAGCTCGGCGTCGTGCCCGTCTCCTACCGAAAGGTGGCGTGCGTGAGGCAGGGCGGGATAAAGTACACGATAACGGGGAACCCGTCGTACAACATGGTGATGGTGAAGAACGTGGGCGGCGCGGGGGACGTGGTGAAGCTGACGGTGAAGGGGACCAAGCGGGTGAAGTGGACGCCGCTGCAGCGCAGCTGGGGCCAGCTCTGGAAGACGGAGGCCAACCTCACCGGCGAGTCGCTCACCTTCCGGGTCATGACCGGCGACCACCGCAAGGCCACCTCCTGGCGCGTCGCCCCCCGCGACTGGACCTACGACAACACCTACCAGGCCAAGAAGAACTTCTAGCTGATCGATTTTTTTCAACTTATTTACTTATAATATTTTTACCTCTCCCTCC GTTCTCTCCCTACTCAATTGATGAATTTTTGGAAGTGAAAACTAATTAACACTGAATTTTTTTCTTACGAATTAATCCTCTGCGTATTTACTAATTTGAGTTTGAAAGAATTCGTTGATAGTGATATTTGATGGATATTCATGTAAGCTTTGGAATCTTAAATTTTGATGTACTGGTCGAAAATGCCATTAGCATAGCATTTATTCTGTTTTTATTATTATTA] [+] EMBL AY100692 [ GACGACCATGGCGCCTCTCCCTCTCCTCACCACGACGTCTCTGCTGCTCTTCTTCTTCCTCGCGTCGTCGTTCGCCGCCGACGTCGTCGTCGCGGGCGGCGGCGGCGGCGGCGGCGGCTACGACGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGGCGGAGCCAAGATGCCGCACGTGAACCACGGCAGGTACAAGTGCGGGCCGTGGGTGGACGGGCACGCGACGTTCTACGGCGGGCGCGACGCGTCGGGCACGACGGAGGGCGGCGCGTGCGGGTACAAGGACGCCGACGGGTACGGCGCGATGACGGCGGCGGTGAGCCCCGCCCTGTTCGACAACGGCGCCGGGTGCGGCGCGTGCTACGAGCTCAAGGGGGATTCCGGGAAGACCGTCGTGGTGACGGCCACCAACCAGGCGCCGCCGCCAGTGAACGGGATGAAGGGCGAGCACTTCGACCTCACCATGCCGGCGTTCCTCTCCATCGCCGAGGAGAAGCTCGGCGTCGTGCCCGTCTCCTACCGAAAGGTGGCGTGCGTGAGGCAGGGCGGGATAAAGTACACGATAACGGGGAACCCGTCGTACAACATGGTGATGGTGAAGAACGTGGGCGGCGCGGGGGACGTGGTGAAGCTGACGGTGAAGGGGACCAAGCGGGTGAAGTGGACGCCGCTGCAGCGCAGCTGGGGCCAGCTCTGGAAGACGGAGGCCAACCTCACCGGCGAGTCGCTCACCTTCCGGGTCATGACCGGCGACCACCGCAAGGCCACCTCCTGGCGCGTCGCCCCCCGCGACTGGACCTACGACAACACCTACCAGGCCAAGAAGAACTTCTAGCTGATCGATTTTTTTCAACTTATTTACTTATAATATTTTTACCTCTCCCTCC GTTCTCTCCCTACTTAATTGATGAATTTTTGGAAGTGAAAACTAATTAACACTGAATTTTTTTCTTACGAATTAAAAA ] [+] EMBL AU172681 [ ACGACCATGGCGCCTCTCCCTCTCCTCACCACGACGTCTCTGCTGCTCTTCTTCTTCCTCGCGTCGTCGTTCGCCGCCGACGTCGTCGTCGCGGGCGGCGGCGGAGGAGGCGGCGGCTACGACGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGGCGGAGCCAAGATGCCGCACGTGAACCACGGCAGGTACAAGTGCGGGCCGTGGGTGGACGGGCACGCGACGTTCTACGGCGGGCGCGACGCGTCGGGCACGACGGAGGGCGGCGCGTGCGGGTACAAGGACGCCGACGGGTACGGCGCGATGACGGCGGCGGTGAGCCCCGCCCTGTTCGACAACGGCGCCGGGTGCGGCGCGTGCTACGAGCTCAAGGGGGATTCCGGGAAGACCGTCGTGGTGA ] [+] EMBL AU182573 [ ACGACCATGGCGCCTCTCCCTCTCCTCACCACGACGTCTCTGCTGCTCTTCTTCTTCCTCGCGTCGTCGTTCGCCGCCGACGTCGTCGTCGCGGGCGGCGGCGGCGGCGGCGGCGGCTACGACGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGGCGGAGCCAAGATGCCGCACGTGAACCACGGCAGGTACAAGTGCGGGCCGTGGGTGGACGGGCACGCGACGTTCTACGGCGGGCGCGACGCGTCGGGCACGACGGAGGGCGGCGCGTGCGGGTACAAGGACGCCGACGGGTACGGCGCGATGACGGCGGCGGTGAGCCCCGCCCTGTTCGACAACGGCGCCGGGTGCGGCGCGTGCTACGAGCTCAAGGGGGATTCCGGGAAGACCGTCGTGG ] [+] EMBL AU172682 [ GGCGGGATAAAGTACACGATAACGGGGAACCCGTCGTACAACATGGTGATGGTNAAGAACGTGGGCGGCGCGGGGGACGTGGTGAAGCTGACGGTGAAGGGGACCAAGCGGGTGAAGTGGACGCCGCTGCAGCGCAGCTGGGGCCAGCTCTGGAAGACGGAGGCCAACCTCACCGGCGAGTCGCTCACCTTCCGGGTCATGACCGGCGACCACCGCAAGGCCACCTCCTGGCGCGTCGCCCCCCGCGACTGGACCTACGACAACACCTACCAGGCCAAGAAGAACTTCTAGCTGATCGATTTTTTTCAACTTATTTACTTATAATATTTTTACCTCTCCCTCCTGTTCTCTCCCTACTTAATTGATGAATTTTTGGAAGTGAAAACTAATTAACACTGAATTTTTTTCTTACGAATTAAAAA ] [+] EMBL AU163712 [ TAATATTTTTACCTCTCCCTCC GTTCTCTCCCTACTTAATTGATGAATTTTTGGANGTGAAAACTAATTAACACTGAATTTTTTTCTTACGAATTAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||