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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9602#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1156 fasta sequence
[TTAATTTCATGGACACAACGACGACCATGGCGCCTCTCCCTCTCCTCACCACGACGTCTCTGCTGCTCTTCTTCTTCCTCGCGTCGTCGTTCGCCGCCGACGTCGTCGTCGCGGGCGGCGGCGGCGGCGGCGGCGGCTACGACGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGGCGGAGCCAAGATGCCGCACGTGAACCACGGCAGGTACAAGTGCGGGCCGTGGGTGGACGGGCACGCGACGTTCTACGGCGGGCGCGACGCGTCGGGCACGACGGAGGGCGGCGCGTGCGGGTACAAGGACGCCGACGGGTACGGCGCGATGACGGCGGCGGTGAGCCCCGCCCTGTTCGACAACGGCGCCGGGTGCGGCGCGTGCTACGAGCTCAAGGGGGATTCCGGGAAGACCGTCGTGGTGACGGCCACCAACCAGGCGCCGCCGCCAGTGAACGGGATGAAGGGCGAGCACTTCGACCTCACCATGCCGGCGTTCCTCTCCATCGCCGAGGAGAAGCTCGGCGTCGTGCCCGTCTCCTACCGAAAGGTGGCGTGCGTGAGGCAGGGCGGGATAAAGTACACGATAACGGGGAACCCGTCGTACAACATGGTGATGGTGAAGAACGTGGGCGGCGCGGGGGACGTGGTGAAGCTGACGGTGAAGGGGACCAAGCGGGTGAAGTGGACGCCGCTGCAGCGCAGCTGGGGCCAGCTCTGGAAGACGGAGGCCAACCTCACCGGCGAGTCGCTCACCTTCCGGGTCATGACCGGCGACCACCGCAAGGCCACCTCCTGGCGCGTCGCCCCCCGCGACTGGACCTACGACAACACCTACCAGGCCAAGAAGAACTTCTAGCTGATCGATTTTTTTCAACTTATTTACTTATAATATTTTTACCTCTCCCTCC-GTTCTCTCCCTACTTAATTGATGAATTTTTGGAAGTGAAAACTAATTAACACTGAATTTTTTTCTTACGAATTAAAAATCTGCGTATTTACTAATTTGAGTTTGAAAGAATTCGTTGATAGTGATATTTGATGGATATTCATGTAAGCTTTGGAATCTTAAATTTTGATGTACTGGTCGAAAATGCCATTAGCATAGCATTTATTCTGTTTTTATTATTATTA]
[+] EMBL AK071328 [TTAATTTCATGGACACAACGACGACCATGGCGCCTCTCCCTCTCCTCACCACGACGTCTCTGCTGCTCTTCTTCTTCCTCGCGTCGTCGTTCGCCGCCGACGTCGTCGTCGCGGGCGGCGGCGGCGGCGGCGGCGGCTACGACGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGGCGGAGCCAAGATGCCGCACGTGAACCACGGCAGGTACAAGTGCGGGCCGTGGGTGGACGGGCACGCGACGTTCTACGGCGGGCGCGACGCGTCGGGCACGACGGAGGGCGGCGCGTGCGGGTACAAGGACGCCGACGGGTACGGCGCGATGACGGCGGCGGTGAGCCCCGCCCTGTTCGACAACGGCGCCGGGTGCGGCGCGTGCTACGAGCTCAAGGGGGATTCCGGGAAGACCGTCGTGGTGACGGCCACCAACCAGGCGCCGCCGCCAGTGAACGGGATGAAGGGCGAGCACTTCGACCTCACCATGCCGGCGTTCCTCTCCATCGCCGAGGAGAAGCTCGGCGTCGTGCCCGTCTCCTACCGAAAGGTGGCGTGCGTGAGGCAGGGCGGGATAAAGTACACGATAACGGGGAACCCGTCGTACAACATGGTGATGGTGAAGAACGTGGGCGGCGCGGGGGACGTGGTGAAGCTGACGGTGAAGGGGACCAAGCGGGTGAAGTGGACGCCGCTGCAGCGCAGCTGGGGCCAGCTCTGGAAGACGGAGGCCAACCTCACCGGCGAGTCGCTCACCTTCCGGGTCATGACCGGCGACCACCGCAAGGCCACCTCCTGGCGCGTCGCCCCCCGCGACTGGACCTACGACAACACCTACCAGGCCAAGAAGAACTTCTAGCTGATCGATTTTTTTCAACTTATTTACTTATAATATTTTTACCTCTCCCTCC GTTCTCTCCCTACTCAATTGATGAATTTTTGGAAGTGAAAACTAATTAACACTGAATTTTTTTCTTACGAATTAATCCTCTGCGTATTTACTAATTTGAGTTTGAAAGAATTCGTTGATAGTGATATTTGATGGATATTCATGTAAGCTTTGGAATCTTAAATTTTGATGTACTGGTCGAAAATGCCATTAGCATAGCATTTATTCTGTTTTTATTATTATTA]
[+] EMBL AY100692 [ GACGACCATGGCGCCTCTCCCTCTCCTCACCACGACGTCTCTGCTGCTCTTCTTCTTCCTCGCGTCGTCGTTCGCCGCCGACGTCGTCGTCGCGGGCGGCGGCGGCGGCGGCGGCGGCTACGACGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGGCGGAGCCAAGATGCCGCACGTGAACCACGGCAGGTACAAGTGCGGGCCGTGGGTGGACGGGCACGCGACGTTCTACGGCGGGCGCGACGCGTCGGGCACGACGGAGGGCGGCGCGTGCGGGTACAAGGACGCCGACGGGTACGGCGCGATGACGGCGGCGGTGAGCCCCGCCCTGTTCGACAACGGCGCCGGGTGCGGCGCGTGCTACGAGCTCAAGGGGGATTCCGGGAAGACCGTCGTGGTGACGGCCACCAACCAGGCGCCGCCGCCAGTGAACGGGATGAAGGGCGAGCACTTCGACCTCACCATGCCGGCGTTCCTCTCCATCGCCGAGGAGAAGCTCGGCGTCGTGCCCGTCTCCTACCGAAAGGTGGCGTGCGTGAGGCAGGGCGGGATAAAGTACACGATAACGGGGAACCCGTCGTACAACATGGTGATGGTGAAGAACGTGGGCGGCGCGGGGGACGTGGTGAAGCTGACGGTGAAGGGGACCAAGCGGGTGAAGTGGACGCCGCTGCAGCGCAGCTGGGGCCAGCTCTGGAAGACGGAGGCCAACCTCACCGGCGAGTCGCTCACCTTCCGGGTCATGACCGGCGACCACCGCAAGGCCACCTCCTGGCGCGTCGCCCCCCGCGACTGGACCTACGACAACACCTACCAGGCCAAGAAGAACTTCTAGCTGATCGATTTTTTTCAACTTATTTACTTATAATATTTTTACCTCTCCCTCC GTTCTCTCCCTACTTAATTGATGAATTTTTGGAAGTGAAAACTAATTAACACTGAATTTTTTTCTTACGAATTAAAAA ]
[+] EMBL AU172681 [ ACGACCATGGCGCCTCTCCCTCTCCTCACCACGACGTCTCTGCTGCTCTTCTTCTTCCTCGCGTCGTCGTTCGCCGCCGACGTCGTCGTCGCGGGCGGCGGCGGAGGAGGCGGCGGCTACGACGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGGCGGAGCCAAGATGCCGCACGTGAACCACGGCAGGTACAAGTGCGGGCCGTGGGTGGACGGGCACGCGACGTTCTACGGCGGGCGCGACGCGTCGGGCACGACGGAGGGCGGCGCGTGCGGGTACAAGGACGCCGACGGGTACGGCGCGATGACGGCGGCGGTGAGCCCCGCCCTGTTCGACAACGGCGCCGGGTGCGGCGCGTGCTACGAGCTCAAGGGGGATTCCGGGAAGACCGTCGTGGTGA ]
[+] EMBL AU182573 [ ACGACCATGGCGCCTCTCCCTCTCCTCACCACGACGTCTCTGCTGCTCTTCTTCTTCCTCGCGTCGTCGTTCGCCGCCGACGTCGTCGTCGCGGGCGGCGGCGGCGGCGGCGGCGGCTACGACGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGACGGCGAAGGCGGCGGCGGCGGCGGCGGAGCCAAGATGCCGCACGTGAACCACGGCAGGTACAAGTGCGGGCCGTGGGTGGACGGGCACGCGACGTTCTACGGCGGGCGCGACGCGTCGGGCACGACGGAGGGCGGCGCGTGCGGGTACAAGGACGCCGACGGGTACGGCGCGATGACGGCGGCGGTGAGCCCCGCCCTGTTCGACAACGGCGCCGGGTGCGGCGCGTGCTACGAGCTCAAGGGGGATTCCGGGAAGACCGTCGTGG ]
[+] EMBL AU172682 [ GGCGGGATAAAGTACACGATAACGGGGAACCCGTCGTACAACATGGTGATGGTNAAGAACGTGGGCGGCGCGGGGGACGTGGTGAAGCTGACGGTGAAGGGGACCAAGCGGGTGAAGTGGACGCCGCTGCAGCGCAGCTGGGGCCAGCTCTGGAAGACGGAGGCCAACCTCACCGGCGAGTCGCTCACCTTCCGGGTCATGACCGGCGACCACCGCAAGGCCACCTCCTGGCGCGTCGCCCCCCGCGACTGGACCTACGACAACACCTACCAGGCCAAGAAGAACTTCTAGCTGATCGATTTTTTTCAACTTATTTACTTATAATATTTTTACCTCTCCCTCCTGTTCTCTCCCTACTTAATTGATGAATTTTTGGAAGTGAAAACTAATTAACACTGAATTTTTTTCTTACGAATTAAAAA ]
[+] EMBL AU163712 [ TAATATTTTTACCTCTCCCTCC GTTCTCTCCCTACTTAATTGATGAATTTTTGGANGTGAAAACTAATTAACACTGAATTTTTTTCTTACGAATTAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||