These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9620#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 518 fasta sequence [CCNCNATCTTCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCCTTTGTGTAGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTAGGTTGTTCATTATTGTTGCAGAGTTTGTGTTTCCGTTTG-TTTTAT-GGTACCAGTGACA--TTTGGTATATAA-TCAAGAAGAATT-AGT-GGAGGACTT-GTTGTATGAATTGCCTTGGGTTCTTTTTAATATGAGAATTCCATAATTGTTCTGTGACAAAAAATCGTCAGTGGCTTTACTTGTTTCTCACAAATCAATTACCAGACTCTTGATCGATTAAACCGTTCAGTT] [+] EMBL C29182 [CCNCNATCTTCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCNTCCTCGACGCCGTCCCGCTCTTCGTNGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTNTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCTTTTNTGTAGCCGATCAAATCGTGAGCTGCGTGA NAAGATTTTACCTCTAGAAAGCTTAGGTTGTTNATTATTGTTGCAGAGTTTGTGTTTCCGNTTGTTTTTATGGGTACCAGTNACAATTTTGGTATATAANTAAAGAAGAATTAAGTGGGAGGACTTNGTTG ] [+] EMBL AK063739 [ ctcgATCTTCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCCTTTGTGTAGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTAGGTTGTTCATTATTGTTGCAGAGTTTGTGTTTCCGTTTG TTTTAT GGTACCAGTGACA TTTGGTATATAA TCAAGAAGAATT AGT GGAGGACTT GTTGTATGAATTGCCTTGGGTTCTTTTTAATATGAGAATTCCATAATTGTTCTGTGACAGGGAGTCGTCAGTGGCTTTACTTGTTTCTCACAAATCAATTACCAGACTCTTGATCGATTAAACCGTTCAGTT] [+] EMBL BE230058 [ TTCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTTGTGCTCGCCTTTGTGTAGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTACGTTGTTCATTATTGTTGCAGAGTTTGTGTTTCCGTTTG TTTTAT GGTACCAGTGACA TTTGGTATATAA TCAAGAAGAATT AGT GGAG ] [+] EMBL BE230400 [ TCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCCTTTGTGTAGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTAGGTTGTTCATTATTGCTGCAGAGTTTGTGTTTCCGTCTG TTTTAT GG CCCAGNGACA TTTGGTATATAA TCAAGAAGAATG AGT GGA ] [+] EMBL AU172417 [ CGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCCTTTGTGTAGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTAGGTTGTTCATTATTGTTGCAGAGTTTGTGTTTCCGTTTG TTTTAT GGTACCAGTGACA TTTGGTATATAA TCAAGAAGAATT AGT GGAGGACTT GTTGTATGAATTGCCTTGGGTTCTTTTTAATATGAGAATTCCATAATTGTTCTGTGACAAAAAAaaa ] [+] EMBL AU183958 [ ACCAGTGACA TTTGGTATATAA TCAAGAAGAATT AGT GGAGGACTT GTTGTATGAATTGCCTTGGGTTCTTTTTAATATGAGAATTCCATAATTGTTCTGTGACAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||