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Oryza sativa
cluster # 9627 cluster # 9627       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9627#0 length = 1051 sequences # 6  
consensusID : consensus_9627#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1051
fasta sequence 
                              [AAGTGCTGGCCAAAGTTTTGGTGCTTTTCTCTGTCCTGGGATCACTCTTGAGCTTGAGGGAGACAGCAACGATTATGTTGGTAAGGGACTATCTGGTG-GAAAGATTGTTGTGTATCCACCAAGAAATAGTCGATTTAATCCACAAGACAATATTGTGATTGGTAATGTGGCTTTATATGGTGCTACAAAGGGAGAGGCATATTTCAATGGTATGGCGGCAGAAAGGTTTTGTGTCCGCAATTCAAGAGCTCAAGCAGTAGTTGAAGGGATTGGCGATCATGGATGTGAGTACATGACAGGAGGTACAGCTGTTATTCTTGGAAAAACTGGTAGGAACTTTGCAGCTGGCATGAGTGGAGGTATTGCTTATGTTTATGATGTGGATGGGAAGTTCAGTAGCCGTTGCAACTATGAGCTAGTTGACTTGTATGCTGTAGTTGAAGAGGATGACATCACAACATTGAGAATGATGATACAACAGCACAGACTTCATACACAAAGTGATTTGGCCAGAGATATACTCTTGAATTTTGATACTCTCCTCCCAAAATTTATAAAAGTATATCCAAGGGATTACAAGCGGGTTTTGGATAAACTAAAAGAAGAGAAGGCTGCTAAAGAAGCAGAGCAAAAGGCAAGAGAA-GTGGTGGATAAGAAGCCAGTTGAAGTAATTCAAGCTCCAAATGGCATTTCAGTAAAGACAGAGAAAGTAATGAACGAAGAGCCATCAAGCCGACCATCACGAGTTTCAAATGCTGTAAAGTACCGAGGTTTCATAAAATATGAGCGAGAGGGTACTTCTTACAGAGATCCAAATGAGCGTGTAAAAGATTGGAATGAAGTTGCAATTGAATTGGTTCCTGGGCCACTGCTAAAGACGCAATCTGCTCGGTGCATGGATTGTGGCACTCCTTTCTGTCATCAGGAGGGTTCTGGTGCTGGTTGTCCTCTTGGAAATAAGATTCCTGAATTCAATGAATTGGTTCATCAGAATAGATGGCATGAAGCCTTGGATCGGCTACTTGAGACAAACAATTTCCCTGAGTTTACT]

[+] EMBL CB636911             [AAGTGCTGGCCAAAGTTTTGGTGCTTTTCTCTGTCCTGGGATCACTCTTGAGCTTGAGGGAGACAGCAACGATTATGTTGGTAAGGGACTATCTGGTG GAAAGATTGTTGTGTATCCACCAAGAAATAGTCGATTTAATCCACAAGACAATATTGTGATTGGTAATGTGGCTTTATATGGTGCTACAAAGGGAGAGGCATATTTCAATGGTATGGCGGCAGAAAGGTTTTGTGTCCGCAATTCAAGAGCTCAAGCAGTAGTTGAAGGGATTGGCGATCATGGATGTGAGTACATGACAGGAGGTACAGCTGTTATTCTTGGAAAAACTGGTAGGAACTTTGCAGCTGGCATGAGTGGAGGTATTGCTTATGTTTATGATGTGGATGGGAAGTTCAGTAGCCGTTGCAACTATGAGCTAGTTGACTTGTATGCTGTAGTTGAAGAGGATGACATCACAACATTGAGAATGATGATACAACAGCACAGACTTCATACACAAAGTGATTTGGCCAGAGATATACTCTTGAATTTTGATACTCTCCTCCC AAATTTATAAAAGTATATCCAAGGGATTACAAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB636953             [AAGTCCTGGCCAAAGTTTTGGTGCTTTTCTCTGTCCTGGGATCACTCTTGAGCTTGACGGAGACAGCAACGATTATGTTGGTAAGGGACTATCTGGTGCGAAAGATTGTTGTGTATCCACCAAGAAATAGTCTTTTTAATCCACAAGACAATATTGTGATTGGTAATGTGGCTTTATATGGTGCTACAAAGGGAGAGGCATATTTCAATGGTATGGCGGCAGAAAGGTTTTGCGTCCGCAATTCAGGAGCTCAAGCAGTAGTTGAAGGGATTGGCGATCATGGATGTGAGTACATGACAGGAGGTACAGCTGTTATTCTTGGAAAAACTGGTAGGAACTTTGCAGCTGGCATGAGTGGAGGTATTGCTTATGTTTATGATGTGGATGGGAAGTTCAGTATCCGc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB641140             [AAGTGCTGGCCAAAGTTTTGGTGCTTTTCTCTGTCCTGGGATCACTCTTGAGCTTGAGGGAGACAGCAACGATTATGTTGGTAAGGGACTATCTGGTG GAAAGATTGTTGTGTATCCACCAAGAAATAGTCGATTTAATCCACAAGACAATATTGTGATTGGTAATGTGGCTTTATATTGTGCTACAAAGGGAGAGGCATATTTCAATGGTATGGCGGCAGAAAGGTTTTGTGTCCGCAATTCAAGAGCTCAAGCAGTAGTTGAAGGGATTGGCGATCATGGATGTGAGTACATGACAGGAGGTACAGCTGTTATTCTTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB639868             [                                                                                                                                                                                                                                                                                                                                                                            TGCTTATGTTTATGATGTGGATGGGAAGTTCAGTAGCCGTTGCAACTATGAGCTAGTTGACTTGTATGCTGTAGTTGAAGAGGATGACATCACAACATTGAGAATGATGATACAACAGCACAGACTTCATACACAAAGTGATTTGGCCAGAGATATACTCTTGAATTTTGATACTCTCCTCCCAAAATTTATAAAAGTATATCCAAGGGATTACAAGCGGGTTTTGGATAAACTAAAAGAAGAGAAGGCTGCTAAAGAAGCAGAGCAAAAGGCAAGAGAA GTGGTGGATAAGAAGCCAGTTGAAGTAATTCAAGCTCCAAATGGCATTTCAGTAAAGACAGAGAAAGTAATGAACGAAGAGCCATCAAGCCGACCATCACGAGTTTCAAATGCTGTAAAGTACCGAGGTTTCATAAAATATGAGCGAGAGGGTACTTCTTACAGAGATCCAAATGAGCGTGTAAAAGATTGGAATGAAGTTGCAATTGAATTGGTTCCTGGGCCACTGCTAAAGACG                                                                                                                                                                           ]
[+] EMBL AK070485             [                                                                                                                                                                                                                                                                                                                                                                                    TTTATGATGTGGATGGGAAGTTCAGTAGCCGTTGCAACTATGAGCTAGTTGACTTGTATGCTGTAGTTGAAGAGGATGACATCACAACATTGAGAATGATGATACAACAGCACAGACTTCATACACAAAGTGATTTGGCCAGAGATATACTCTTGAATTTTGATACTCTCCTCCCAAAATTTATAAAAGTATATCCAAGGGATTACAAGCGGGTTTTGGATAAACTAAAAGAAGAGAAGGCTGCTAAAGAAGCAGAGCAAAAGGCAAGAGAA GTGGTGGATAAGAAGCCAGTTGAAGTAATTCAAGCTCCAAATGGCATTTCAGTAAAGACAGAGAAAGTAATGAACGAAGAGCCATCAAGCCGACCATCACGAGTTTCAAATGCTGTAAAGTACCGAGGTTTCATAAAATATGAGCGAGAGGGTACTTCTTACAGAGATCCAAATGAGCGTGTAAAAGATTGGAATGAAGTTGCAATTGAATTGGTTCCTGGGCCACTGCTAAAGACGCAATCTGCTCGGTGCATGGATTGTGGCACTCCTTTCTGTCATCAGGAGGGTTCTGGTGCTGGTTGTCCTCTTGGAAATAAGATTCCTGAATTCAATGAATTGGTTCATCAGAATAGATGGCATGAAGCCTTGGATCGGCTACTTGAGACAAACAATTTCCCTGAGTTTACT]
[+] EMBL CB681045             [                                                                                                                                                                                                                                                                                                                                                                                                                                    TTGACTTGTATGCTGCAGTTGAAGAGGATGACATCACAACATTGAGAATGATGATACAACAGCACAGACTTCATACGCAAAGTGATTTGGCCAGAGATATACTCTTGAATTTTGATACTCTCCTCCCAAAATTTATATTAGTATATCCAAGGGATTACCAGCGGGTTTTGGATAAACTAAAAGAAGAGAAGGCTGCTAAAGAAGCATAGCAAAAGGCAAGAGAAGGTGGTGGATAAGAAGCCAGCTGAAGTAATTCAAGCTCCAAATGGCATTTCAGTACAGACAGAGAAAGTAATGAACGAAGAGCCATCAAGCCGACCATCACGAGTTTCAAATGCTGTAAAGTACCGAGGTTTCATAAAATATGAGCGAGAGGG                                                                                                                                                                                                                                                                ]




>consensus_9627#0
AAGTGCTGGCCAAAGTTTTGGTGCTTTTCTCTGTCCTGGGATCACTCTTGAGCTTGAGGG
AGACAGCAACGATTATGTTGGTAAGGGACTATCTGGTGGAAAGATTGTTGTGTATCCACC
AAGAAATAGTCGATTTAATCCACAAGACAATATTGTGATTGGTAATGTGGCTTTATATGG
TGCTACAAAGGGAGAGGCATATTTCAATGGTATGGCGGCAGAAAGGTTTTGTGTCCGCAA
TTCAAGAGCTCAAGCAGTAGTTGAAGGGATTGGCGATCATGGATGTGAGTACATGACAGG
AGGTACAGCTGTTATTCTTGGAAAAACTGGTAGGAACTTTGCAGCTGGCATGAGTGGAGG
TATTGCTTATGTTTATGATGTGGATGGGAAGTTCAGTAGCCGTTGCAACTATGAGCTAGT
TGACTTGTATGCTGTAGTTGAAGAGGATGACATCACAACATTGAGAATGATGATACAACA
GCACAGACTTCATACACAAAGTGATTTGGCCAGAGATATACTCTTGAATTTTGATACTCT
CCTCCCAAAATTTATAAAAGTATATCCAAGGGATTACAAGCGGGTTTTGGATAAACTAAA
AGAAGAGAAGGCTGCTAAAGAAGCAGAGCAAAAGGCAAGAGAAGTGGTGGATAAGAAGCC
AGTTGAAGTAATTCAAGCTCCAAATGGCATTTCAGTAAAGACAGAGAAAGTAATGAACGA
AGAGCCATCAAGCCGACCATCACGAGTTTCAAATGCTGTAAAGTACCGAGGTTTCATAAA
ATATGAGCGAGAGGGTACTTCTTACAGAGATCCAAATGAGCGTGTAAAAGATTGGAATGA
AGTTGCAATTGAATTGGTTCCTGGGCCACTGCTAAAGACGCAATCTGCTCGGTGCATGGA
TTGTGGCACTCCTTTCTGTCATCAGGAGGGTTCTGGTGCTGGTTGTCCTCTTGGAAATAA
GATTCCTGAATTCAATGAATTGGTTCATCAGAATAGATGGCATGAAGCCTTGGATCGGCT
ACTTGAGACAAACAATTTCCCTGAGTTTACT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)