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Oryza sativa
cluster # 9637 cluster # 9637       Sequences # 6       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9637#0 length = 672 sequences # 1  
consensus_9637#1 length = 649 sequences # 1  
consensus_9637#2 length = 602 sequences # 1  
consensus_9637#3 length = 498 sequences # 1  
consensus_9637#4 length = 348 sequences # 1  
consensus_9637#5 length = 312 sequences # 1  

consensusID : consensus_9637#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence
                              [GAACCGCGTCCGCCCGCGCAGCTGCGCTTCGCCTCGCCGGTCGCCCTCGTCCGGCTGGGAGGCGCGCCGCCGCGAATGGGGAGGAACCAGCGTTGCCGCCGCGACCCGCCCGCGCAGCCGCGCTTCGCCTCGCCGGTCGGCCTCGTCCGGCTGGGAGGCGCGCCACCGCGAGTGGGGAGGCACCCGGCGCGTGGAGGAGGCCGCGGTGCTCTTGCCGGCCGTCGGGAATACACTCCGCCCACGCCGCACCTCCAATTTCGGTGGCCTCGACTCGTTGATGGAGTTCAGCGTCAGAGCCCGCACCGGTTGGCCGCCCACTTCGTCGCCAGCGAGGGGGGACACCGCCGCATGGCTTCGTACAATGGAGAACGCTGCACTGTTTCCTGTGCCCGCGAGGTGTTTGTGGAAATGCCCCCGAGGTTGTGTGGTTCTGTATTGTGAAATGCCCTGCCCCTGCTCTGTGGTTCTGTATTGTGGAAAATGCCCTAGTCCTGCCCTGCTGCCTGGGATGATGCAGACTCCTAATTGGAAGTGAATTGTTATTGTTTGGCATTGTGAGTTTGGGCAAATTGATTATGTAATCTTGATTTTTGTCATAAAAAAAATGGTGAAACATGATTCAGCAGTTCTGATATGCTGAACAGAGATTTATGATGTTTTTTATGACTGCAC]

[+] EMBL AK062823             [GAACCGCGTCCGCCCGCGCAGCTGCGCTTCGCCTCGCCGGTCGCCCTCGTCCGGCTGGGAGGCGCGCCGCCGCGAATGGGGAGGAACCAGCGTTGCCGCCGCGACCCGCCCGCGCAGCCGCGCTTCGCCTCGCCGGTCGGCCTCGTCCGGCTGGGAGGCGCGCCACCGCGAGTGGGGAGGCACCCGGCGCGTGGAGGAGGCCGCGGTGCTCTTGCCGGCCGTCGGGAATACACTCCGCCCACGCCGCACCTCCAATTTCGGTGGCCTCGACTCGTTGATGGAGTTCAGCGTCAGAGCCCGCACCGGTTGGCCGCCCACTTCGTCGCCAGCGAGGGGGGACACCGCCGCATGGCTTCGTACAATGGAGAACGCTGCACTGTTTCCTGTGCCCGCGAGGTGTTTGTGGAAATGCCCCCGAGGTTGTGTGGTTCTGTATTGTGAAATGCCCTGCCCCTGCTCTGTGGTTCTGTATTGTGGAAAATGCCCTAGTCCTGCCCTGCTGCCTGGGATGATGCAGACTCCTAATTGGAAGTGAATTGTTATTGTTTGGCATTGTGAGTTTGGGCAAATTGATTATGTAATCTTGATTTTTGTCATAAAAAAAATGGTGAAACATGATTCAGCAGTTCTGATATGCTGAACAGAGATTTATGATGTTTTTTATGACTGCAC]


>consensus_9637#0 GAACCGCGTCCGCCCGCGCAGCTGCGCTTCGCCTCGCCGGTCGCCCTCGTCCGGCTGGGA GGCGCGCCGCCGCGAATGGGGAGGAACCAGCGTTGCCGCCGCGACCCGCCCGCGCAGCCG CGCTTCGCCTCGCCGGTCGGCCTCGTCCGGCTGGGAGGCGCGCCACCGCGAGTGGGGAGG CACCCGGCGCGTGGAGGAGGCCGCGGTGCTCTTGCCGGCCGTCGGGAATACACTCCGCCC ACGCCGCACCTCCAATTTCGGTGGCCTCGACTCGTTGATGGAGTTCAGCGTCAGAGCCCG CACCGGTTGGCCGCCCACTTCGTCGCCAGCGAGGGGGGACACCGCCGCATGGCTTCGTAC AATGGAGAACGCTGCACTGTTTCCTGTGCCCGCGAGGTGTTTGTGGAAATGCCCCCGAGG TTGTGTGGTTCTGTATTGTGAAATGCCCTGCCCCTGCTCTGTGGTTCTGTATTGTGGAAA ATGCCCTAGTCCTGCCCTGCTGCCTGGGATGATGCAGACTCCTAATTGGAAGTGAATTGT TATTGTTTGGCATTGTGAGTTTGGGCAAATTGATTATGTAATCTTGATTTTTGTCATAAA AAAAATGGTGAAACATGATTCAGCAGTTCTGATATGCTGAACAGAGATTTATGATGTTTT TTATGACTGCAC



consensusID : consensus_9637#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 649
fasta sequence
                              [CTCGTCCGCGTACACCGGCGCAGCCTGAGACGGACTCAACTTCGCCTCGCCCTCAGGTCAGCGTACGCCGGCGCTTCACCTCGCCCTCGTCCGGCCGCCGCCGCGAGCCAGCTGGGAGGTGCGCCGCCGCGACCGGAGATGTGCCAGGCCGCCCTGCCCTTTCGCCGTGACCGGGGGCACGTGGAGGCGGCCGGCCGCCGGGCCTGACGGCGCGGTGGTGCAGGCGGGCGGCCGCACAGCCCGAGCTCAGCCCGTGGAGGAGGCCGCGCTGCTCCTGCCGCGCCGCACGTCCCGATTTCGGCGGCCTCGACTCCACAATGGATTTCAGCGTCCGAGCCCGCATCCAGAGCCCGCACTGGTCAGCCGCCCACTTCATCGCCGGCGAGAGGTGACACCGTCGCCCAGCTTCGTCCAGTGTAGGAGTCACTGGTGGTAGATTTTTTGGAGAACGCCACACCTTTTCCTGTGCCCGTGAGGTGTTTGTGTAAATGCCCTGCCGTCTGGGATGATGCTGAGTCCTAATTGAAAGTGAATTGTTATTGTTTGGCTTTGTGAGATTGGAAGCAAATTGATTATGTAATCTTGATTGAGATTGATTTGGTTATATGACTCATATATGCTGTAATTTGAATGAATGAATGAATCAGTA]

[+] EMBL AK063033             [CTCGTCCGCGTACACCGGCGCAGCCTGAGACGGACTCAACTTCGCCTCGCCCTCAGGTCAGCGTACGCCGGCGCTTCACCTCGCCCTCGTCCGGCCGCCGCCGCGAGCCAGCTGGGAGGTGCGCCGCCGCGACCGGAGATGTGCCAGGCCGCCCTGCCCTTTCGCCGTGACCGGGGGCACGTGGAGGCGGCCGGCCGCCGGGCCTGACGGCGCGGTGGTGCAGGCGGGCGGCCGCACAGCCCGAGCTCAGCCCGTGGAGGAGGCCGCGCTGCTCCTGCCGCGCCGCACGTCCCGATTTCGGCGGCCTCGACTCCACAATGGATTTCAGCGTCCGAGCCCGCATCCAGAGCCCGCACTGGTCAGCCGCCCACTTCATCGCCGGCGAGAGGTGACACCGTCGCCCAGCTTCGTCCAGTGTAGGAGTCACTGGTGGTAGATTTTTTGGAGAACGCCACACCTTTTCCTGTGCCCGTGAGGTGTTTGTGTAAATGCCCTGCCGTCTGGGATGATGCTGAGTCCTAATTGAAAGTGAATTGTTATTGTTTGGCTTTGTGAGATTGGAAGCAAATTGATTATGTAATCTTGATTGAGATTGATTTGGTTATATGACTCATATATGCTGTAATTTGAATGAATGAATGAATCAGTA]


>consensus_9637#1 CTCGTCCGCGTACACCGGCGCAGCCTGAGACGGACTCAACTTCGCCTCGCCCTCAGGTCA GCGTACGCCGGCGCTTCACCTCGCCCTCGTCCGGCCGCCGCCGCGAGCCAGCTGGGAGGT GCGCCGCCGCGACCGGAGATGTGCCAGGCCGCCCTGCCCTTTCGCCGTGACCGGGGGCAC GTGGAGGCGGCCGGCCGCCGGGCCTGACGGCGCGGTGGTGCAGGCGGGCGGCCGCACAGC CCGAGCTCAGCCCGTGGAGGAGGCCGCGCTGCTCCTGCCGCGCCGCACGTCCCGATTTCG GCGGCCTCGACTCCACAATGGATTTCAGCGTCCGAGCCCGCATCCAGAGCCCGCACTGGT CAGCCGCCCACTTCATCGCCGGCGAGAGGTGACACCGTCGCCCAGCTTCGTCCAGTGTAG GAGTCACTGGTGGTAGATTTTTTGGAGAACGCCACACCTTTTCCTGTGCCCGTGAGGTGT TTGTGTAAATGCCCTGCCGTCTGGGATGATGCTGAGTCCTAATTGAAAGTGAATTGTTAT TGTTTGGCTTTGTGAGATTGGAAGCAAATTGATTATGTAATCTTGATTGAGATTGATTTG GTTATATGACTCATATATGCTGTAATTTGAATGAATGAATGAATCAGTA



consensusID : consensus_9637#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 602
fasta sequence
                              [GCAGCAGTGGAGCGCTGGCCAGCAGGACTGATGGCAGCAGCTGATGCAGGCGGCAGGGGCCCCAGCCCGAGCCCGGCGCGTGGAGGAGGCCCAGGTGCTCCTGCCGGCCGTTGGGAACACACTCCGCCCGCGCCGCACCTCCAATTTCGGCAGCCTCGACTCGTTGATGGAGTTCAGCGTCACAAGCCCAGCACCGGTCGACCAGCNCCACGTCGTCAGCCAGGCGAGGGGGGACGCCATGTCGCACAGGCTTCGTCCAGTGGAGAACAGCTGCACCAGTTTCCTGCGCCCAGCGAGGTGTTTGTGGAAATGCCCCCGAGGCATGTATGGTTCTGTATTGTGAAATGCACCCTGCACCCTGCTCTGTGGTTCTGTATTGTGTGGTTCTGTGTTGTGGAAATGCCCCAGTCCTGCCCTGCTGCCTGGGATGATGCAGACTCCTAATTGGAAGTGAATTGTTATTGTTTGGCATTGTGAGTTTTTGCAAATTGATTCTGTAATCTTGATTTTTGTCATAAAAAAAAGGTGAAACATGATTCAGCAGTTCTGATCTGCTGAACAGGGATATATGAGAACCTGGTTGCAAATGTCTAAAAAAAAAA]

[+] EMBL BI805687             [GCAGCAGTGGAGCGCTGGCCAGCAGGACTGATGGCAGCAGCTGATGCAGGCGGCAGGGGCCCCAGCCCGAGCCCGGCGCGTGGAGGAGGCCCAGGTGCTCCTGCCGGCCGTTGGGAACACACTCCGCCCGCGCCGCACCTCCAATTTCGGCAGCCTCGACTCGTTGATGGAGTTCAGCGTCACAAGCCCAGCACCGGTCGACCAGCNCCACGTCGTCAGCCAGGCGAGGGGGGACGCCATGTCGCACAGGCTTCGTCCAGTGGAGAACAGCTGCACCAGTTTCCTGCGCCCAGCGAGGTGTTTGTGGAAATGCCCCCGAGGCATGTATGGTTCTGTATTGTGAAATGCACCCTGCACCCTGCTCTGTGGTTCTGTATTGTGTGGTTCTGTGTTGTGGAAATGCCCCAGTCCTGCCCTGCTGCCTGGGATGATGCAGACTCCTAATTGGAAGTGAATTGTTATTGTTTGGCATTGTGAGTTTTTGCAAATTGATTCTGTAATCTTGATTTTTGTCATAAAAAAAAGGTGAAACATGATTCAGCAGTTCTGATCTGCTGAACAGGGATATATGAGAACCTGGTTGCAAATGTCTAAAAAAAAAA]


>consensus_9637#2 GCAGCAGTGGAGCGCTGGCCAGCAGGACTGATGGCAGCAGCTGATGCAGGCGGCAGGGGC CCCAGCCCGAGCCCGGCGCGTGGAGGAGGCCCAGGTGCTCCTGCCGGCCGTTGGGAACAC ACTCCGCCCGCGCCGCACCTCCAATTTCGGCAGCCTCGACTCGTTGATGGAGTTCAGCGT CACAAGCCCAGCACCGGTCGACCAGCNCCACGTCGTCAGCCAGGCGAGGGGGGACGCCAT GTCGCACAGGCTTCGTCCAGTGGAGAACAGCTGCACCAGTTTCCTGCGCCCAGCGAGGTG TTTGTGGAAATGCCCCCGAGGCATGTATGGTTCTGTATTGTGAAATGCACCCTGCACCCT GCTCTGTGGTTCTGTATTGTGTGGTTCTGTGTTGTGGAAATGCCCCAGTCCTGCCCTGCT GCCTGGGATGATGCAGACTCCTAATTGGAAGTGAATTGTTATTGTTTGGCATTGTGAGTT TTTGCAAATTGATTCTGTAATCTTGATTTTTGTCATAAAAAAAAGGTGAAACATGATTCA GCAGTTCTGATCTGCTGAACAGGGATATATGAGAACCTGGTTGCAAATGTCTAAAAAAAA AA



consensusID : consensus_9637#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 498
fasta sequence
                              [CAGCCTGAGATAGACTCAACTTCTCCTCGCCCTCAGGTCCGCGTACGCCGGGCCTAACGACGCGGTGGTGCAGGTGGGTGGCTGCGCAGCCCGAGCCCGGCGTGTGGAGGAGACCGCGCTGCTCCTGCCACGCCACACGTCCCGATTTCGGCAGCCTCGACTCCACGATGGATTTCGGCGTCCGAGCCCGCATCCAGAGCCCGTACAGGTCGGCTGCCCACTTCGTCGCCGGCGAGAGGTGACACCGCCGCCCGGCTTCGTCCAGGGTAGGAGTTATTGGCGGTTGAGTTTGTGGAGAACACCACACCTTTTCCCATGCCCGCGAGGTGTTTGTGGAAATGCCCTGCCACCTGGGATGATGCAGAGTCCTAATTGGAAGTGAATTGTTATTGTTTGGCTTTGTGAGATTGGGAAAATTGATTCTGTAATCTTGAGAGTAATTTGGTTGTATGACTCATATATGCTGTAATTTGAATGAATGAATCAGTAACTTCTGAT]

[+] EMBL AK062623             [CAGCCTGAGATAGACTCAACTTCTCCTCGCCCTCAGGTCCGCGTACGCCGGGCCTAACGACGCGGTGGTGCAGGTGGGTGGCTGCGCAGCCCGAGCCCGGCGTGTGGAGGAGACCGCGCTGCTCCTGCCACGCCACACGTCCCGATTTCGGCAGCCTCGACTCCACGATGGATTTCGGCGTCCGAGCCCGCATCCAGAGCCCGTACAGGTCGGCTGCCCACTTCGTCGCCGGCGAGAGGTGACACCGCCGCCCGGCTTCGTCCAGGGTAGGAGTTATTGGCGGTTGAGTTTGTGGAGAACACCACACCTTTTCCCATGCCCGCGAGGTGTTTGTGGAAATGCCCTGCCACCTGGGATGATGCAGAGTCCTAATTGGAAGTGAATTGTTATTGTTTGGCTTTGTGAGATTGGGAAAATTGATTCTGTAATCTTGAGAGTAATTTGGTTGTATGACTCATATATGCTGTAATTTGAATGAATGAATCAGTAACTTCTGAT]


>consensus_9637#3 CAGCCTGAGATAGACTCAACTTCTCCTCGCCCTCAGGTCCGCGTACGCCGGGCCTAACGA CGCGGTGGTGCAGGTGGGTGGCTGCGCAGCCCGAGCCCGGCGTGTGGAGGAGACCGCGCT GCTCCTGCCACGCCACACGTCCCGATTTCGGCAGCCTCGACTCCACGATGGATTTCGGCG TCCGAGCCCGCATCCAGAGCCCGTACAGGTCGGCTGCCCACTTCGTCGCCGGCGAGAGGT GACACCGCCGCCCGGCTTCGTCCAGGGTAGGAGTTATTGGCGGTTGAGTTTGTGGAGAAC ACCACACCTTTTCCCATGCCCGCGAGGTGTTTGTGGAAATGCCCTGCCACCTGGGATGAT GCAGAGTCCTAATTGGAAGTGAATTGTTATTGTTTGGCTTTGTGAGATTGGGAAAATTGA TTCTGTAATCTTGAGAGTAATTTGGTTGTATGACTCATATATGCTGTAATTTGAATGAAT GAATCAGTAACTTCTGAT



consensusID : consensus_9637#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 348
fasta sequence
                              [GGCTCGCCGCCGCCGCGCCTGCGCCAGGCCGCTGTGGTCGCCGCGAGTTAGGAGGGGACCGNCTGCCGCCGCGCGAGGCCAACTCCCTGCCCTGCCCTGCCGTGACCTGTGGAGAGGCGCCAGGCCAGGCCGGCGCGACCGGGGACACGTGGAGGCGGCCGGCCGCCGNGCCTCACGGCGCGGTGGTGCAGGCGGACGGTCGCCCAACCCGAGCCCGTCGCGTGGAGGAGAGGACGTNATGGAGGAGGCCGTGCTGCTCCATGCTTGCTGCTCCATCCATGCTGCTCCATCTAGCTATATTGTTNCACGGTTGCTGATGCTAGATGAGCAATTGTTTTTAGTTATGTT]

[+] EMBL OS12592A             [GGCTCGCCGCCGCCGCGCCTGCGCCAGGCCGCTGTGGTCGCCGCGAGTTAGGAGGGGACCGNCTGCCGCCGCGCGAGGCCAACTCCCTGCCCTGCCCTGCCGTGACCTGTGGAGAGGCGCCAGGCCAGGCCGGCGCGACCGGGGACACGTGGAGGCGGCCGGCCGCCGNGCCTCACGGCGCGGTGGTGCAGGCGGACGGTCGCCCAACCCGAGCCCGTCGCGTGGAGGAGAGGACGTNATGGAGGAGGCCGTGCTGCTCCATGCTTGCTGCTCCATCCATGCTGCTCCATCTAGCTATATTGTTNCACGGTTGCTGATGCTAGATGAGCAATTGTTTTTAGTTATGTT]


>consensus_9637#4 GGCTCGCCGCCGCCGCGCCTGCGCCAGGCCGCTGTGGTCGCCGCGAGTTAGGAGGGGACC GNCTGCCGCCGCGCGAGGCCAACTCCCTGCCCTGCCCTGCCGTGACCTGTGGAGAGGCGC CAGGCCAGGCCGGCGCGACCGGGGACACGTGGAGGCGGCCGGCCGCCGNGCCTCACGGCG CGGTGGTGCAGGCGGACGGTCGCCCAACCCGAGCCCGTCGCGTGGAGGAGAGGACGTNAT GGAGGAGGCCGTGCTGCTCCATGCTTGCTGCTCCATCCATGCTGCTCCATCTAGCTATAT TGTTNCACGGTTGCTGATGCTAGATGAGCAATTGTTTTTAGTTATGTT



consensusID : consensus_9637#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 312
fasta sequence
                              [GAGAGGTGACNCCGCCGCCCGGCTTCGTCCAAGGTAGGAGTCNCTGGTGGTTGAGTTTGTGGAGAACGACGCCCCTTTTCCTGTGCCCNCGAGGTGTTTGTGGAAATGACCTNCCGTNTGGGATGATGCAGAGTCCTGATTGAAAGTGAATTGTTATTGTTTGGCTTTGTGAGATTAGAAGCAAATTGATTCTGTAATCTTTGATTGAGATTGATTTGGTTGTATGACTCATATATGCTGTAATTTGAATGAATGAATGAATAAATCAGTAACTTCTGACGATGTTTTNTAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU173964             [GAGAGGTGACNCCGCCGCCCGGCTTCGTCCAAGGTAGGAGTCNCTGGTGGTTGAGTTTGTGGAGAACGACGCCCCTTTTCCTGTGCCCNCGAGGTGTTTGTGGAAATGACCTNCCGTNTGGGATGATGCAGAGTCCTGATTGAAAGTGAATTGTTATTGTTTGGCTTTGTGAGATTAGAAGCAAATTGATTCTGTAATCTTTGATTGAGATTGATTTGGTTGTATGACTCATATATGCTGTAATTTGAATGAATGAATGAATAAATCAGTAACTTCTGACGATGTTTTNTAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9637#5 GAGAGGTGACNCCGCCGCCCGGCTTCGTCCAAGGTAGGAGTCNCTGGTGGTTGAGTTTGT GGAGAACGACGCCCCTTTTCCTGTGCCCNCGAGGTGTTTGTGGAAATGACCTNCCGTNTG GGATGATGCAGAGTCCTGATTGAAAGTGAATTGTTATTGTTTGGCTTTGTGAGATTAGAA GCAAATTGATTCTGTAATCTTTGATTGAGATTGATTTGGTTGTATGACTCATATATGCTG TAATTTGAATGAATGAATGAATAAATCAGTAACTTCTGACGATGTTTTNTAAAAAAAAAA AAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9637#0      -------------GAACCGCGTCCGCCCGCGCAGCTGCGCTTCGCCTCGCCGGTCGCCCT 47
consensus_9637#2      ------------------------------------------------------------
consensus_9637#3      ------------------------------------------------------------
consensus_9637#5      ------------------------------------------------------------
consensus_9637#1      CTCGTCCGCGTACACCGGCGCAGCCTGAGACGGACTCAACTTCGCCTCGCCCTCAGGTCA 60
consensus_9637#4      ------------------------------------------------------------
                                                                                  

consensus_9637#0      CGTCCGGCTGGGAGGCGCGCCGCCGCGAATGGGGAGGAACCAGCGTTGCCGCCGCGACCC 107
consensus_9637#2      -----------------------------------------------GCAGCAGTGGAGC 13
consensus_9637#3      ------------------------------------------------------------
consensus_9637#5      ------------------------------------------------------------
consensus_9637#1      GCGTACGCCGGCGCTTCACCTCGCCCTCGTCCGGCCGCCGCCGCGAGCCAGCTGGGAGGT 120
consensus_9637#4      ------------------------------------------------------------
                                                                                  

consensus_9637#0      GCCCGCGCAGCCGCGCTTCGCCTCGCCGGTCGGCCTCGTCCGGCTGGGAGGCGCGCCACC 167
consensus_9637#2      GCTGGC-CAGCAGGACTGA----TGGCAGCAG--CTGATGCAGGCGGCAGGGGCCCCAGC 66
consensus_9637#3      ------------------------------CAGCCTGAGATAGACTCAACTTCTCCTCGC 30
consensus_9637#5      ------------------------------------------------------------
consensus_9637#1      GCGCCGCCGCGACCGGAGATGTGCCAGGCCGCCCTGCCCTTTCGCCGTGACCGGGGGCAC 180
consensus_9637#4      ------------------------------------------------------------
                                                                                  

consensus_9637#0      GCGAGTGGGGAGGCACCCGGCGCGTGGAGGAGGCCGCGGTGCTCTTGCCGGCCGTCGGGA 227
consensus_9637#2      CCGAG----------CCCGGCGCGTGGAGGAGGCCCAGGTGCTCCTGCCGGCCGTTGGGA 116
consensus_9637#3      CCTCAGGTCCGCGTACGCCGGGCCTAACGACGCGGTGGTGCAGGTGGGTGGCTGCGCAGC 90
consensus_9637#5      ------------------------------------------------------------
consensus_9637#1      GTGGAGGCGGCCGGCCGCCGGGCCTGACGGCGCGGTGGTGCAGGCGGGCGGCCGCACAGC 240
consensus_9637#4      ------------------------------------------------------------
                                                                                  

consensus_9637#0      ATACACTCCGCCCACGCCGCACCTCCAATTTCGGTGGCCTCGACTCGTTGATGGAGTTCA 287
consensus_9637#2      ACACACTCCGCCCGCGCCGCACCTCCAATTTCGGCAGCCTCGACTCGTTGATGGAGTTCA 176
consensus_9637#3      CCGAGCCCGGCGTGTGGAGGAGACCGCGCTGCTCCTGCCACGCCACACGTCCCGATTTCG 150
consensus_9637#5      ------------------------------------------------------------
consensus_9637#1      CCGAGCTCAGCCCGTGGAGGAGGCCGCGCTGCTCCTGCCGCGCCGCACGTCCCGATTTCG 300
consensus_9637#4      ------------------------------------------------------------
                                                                                  

consensus_9637#0      GCGTCA-GAGCCC-GCACCGGTTGGCCG--CCCACTTCGTC-GCCAG-CGA-GGGGGGAC 340
consensus_9637#2      GCGTCACAAGCCCAGCACCGGTCGACCAGCNCCACGTCGTCAGCCAGGCGA-GGGGGGAC 235
consensus_9637#3      GCAGCCTCGACTCCACGATGGATTTCGGCGTCCGAGCCCGCATCCAG------AGCCCGT 204
consensus_9637#5      ------------------------------------------------------------
consensus_9637#1      GCGGCCTCGACTCCACAATGGATTTCAGCGTCCGAGCCCGCATCCAG------AGCCCGC 354
consensus_9637#4      -------------------GGCTCGCCGCCGCCGCGCCTGCGCCAGGCCGCTGTGGTCGC 41
                                                                                  

consensus_9637#0      ACC--GCCGCAT-GGCTTCGTACAATGGAGAAC-GCTGCA-CT-GTTTCCTGTGCCC-GC 393
consensus_9637#2      GCCATGTCGCACAGGCTTCGTCCAGTGGAGAACAGCTGCA-CCAGTTTCCTGCGCCCAGC 294
consensus_9637#3      ACAGGTCGGCTGCCCACTTCGTCGCCGGCGAGAGGTGACA-CC-GCCGCCCGGCTTCGTC 262
consensus_9637#5      -----------------------------GAGAGGTGACN-CC-GCCGCCCGGCTTCGTC 29
consensus_9637#1      ACTGGTCAGCCGCCCACTTCATCGCCGGCGAGAGGTGACA-CC-GTCGCCCAGCTTCGTC 412
consensus_9637#4      CGCGAGTTAGGAGGGGACCGNCTGCCGCCGCGCGAGGCCAACTCCCTGCCCTGCCCTGCC 101
                                                   *        *  *      **         *

consensus_9637#0      GAGGTGTTTGTGGAAATGCCCC-CGAGGT-TGTGTGGTTCTGTAT-TGTGAAATGC--CC 448
consensus_9637#2      GAGGTGTTTGTGGAAATGCCCC-CGAGGCATGTATGGTTCTGTAT-TGTGAAATGCACCC 352
consensus_9637#3      CAGG-----GTAGGAGT--TAT-TGG--------CGGTTGAGT-T-TGTGGAGAACA--C 302
consensus_9637#5      CAAG-----GTAGGAGT--CNC-TGG--------TGGTTGAGT-T-TGTGGAGAACG--A 69
consensus_9637#1      CAGT-----GTAGGAGT--CAC-TGG--------TGGTAGATT-T-TTTGGAGAACG--C 452
consensus_9637#4      GTGACCTGTGGAGAGGCGCCAGGCCAGGCCGGCGCGACCGGGGACACGTGGAGGCGGCCG 161
                               *  *                      *            ** *        

consensus_9637#0      TGC-CCCTGCTCTGTGGTTCTGTATTGTG--------------GAAAATGCCCTAGTCCT 493
consensus_9637#2      TGCACCCTGCTCTGTGGTTCTGTATTGTGTGGTTCTGTGTTGTGGAAATGCCCCAGTCCT 412
consensus_9637#3      CACACCTTTTCCCATGCCCGCGAGGTGTTTG-----------TGGAAATGCCC------- 344
consensus_9637#5      CGCCCCTTTTCCTGTGCCCNCGAGGTGTTTG-----------TGGAAATGACC------- 111
consensus_9637#1      CACACCTTTTCCTGTGCCCGTGAGGTGTTTG-----------TGTAAATGCCC------- 494
consensus_9637#4      GCCGCCGNGCCTCACGGCGCGGTGGTGCAGGCG----------GACGGTCGCCCAACCCG 211
                        * **         *     *   **                *    *  **       

consensus_9637#0      GCCCTGCTGCCTGGGATGATGCAGACTCCTAATTGGAAGTGAATTGTTAT-TGTTTGGCA 552
consensus_9637#2      GCCCTGCTGCCTGGGATGATGCAGACTCCTAATTGGAAGTGAATTGTTAT-TGTTTGGCA 471
consensus_9637#3      ----TGCCACCTGGGATGATGCAGAGTCCTAATTGGAAGTGAATTGTTAT-TGTTTGGCT 399
consensus_9637#5      ----TNCCGTNTGGGATGATGCAGAGTCCTGATTGAAAGTGAATTGTTAT-TGTTTGGCT 166
consensus_9637#1      ----TGCCGTCTGGGATGATGCTGAGTCCTAATTGAAAGTGAATTGTTAT-TGTTTGGCT 549
consensus_9637#4      AGCCCGTCGCGTGGAG-GAGAGGACGTNATGGAGGAGGCCGTGCTGCTCCATGCTTGCTG 270
                                 ***   **       *  *    *     *   ** *   ** ***   

consensus_9637#0      TTGTGAGTTTGGG--CAAATTGATTATGTAATCTTGATTTTTGTCATAAAAAAAATGGTG 610
consensus_9637#2      TTGTGAGTTTTTG--CAAATTGATTCTGTAATCTTGATTTTTGTCATAAAAAAAA-GGTG 528
consensus_9637#3      TTGTGAGATTGGGA--AAATTGATTCTGTAATC-----TTGAGAGTAATTTGGTTGTATG 452
consensus_9637#5      TTGTGAGATTAGAAGCAAATTGATTCTGTAATCTTTGATTGAGATTGATTTGGTTGTATG 226
consensus_9637#1      TTGTGAGATTGGAAGCAAATTGATTATGTAATCTT-GATTGAGATTGATTTGGTTATATG 608
consensus_9637#4      CTCCATCCATGCT----GCTCCATCTAGCTATATTGTTNCACGGTTGCTGATGCTAGATG 326
                       *       *         *  **   *  **          *               **

consensus_9637#0      AAACATG-ATTCAGCAGTTCTGATATGCT--------GAACAGAGATTTATGATGTTTT- 660
consensus_9637#2      AAACATG-ATTCAGCAGTTCTGATCTGCT--------GAACAGGGATATATGAGAACCTG 579
consensus_9637#3      ACTCATATATGCTGTAATTTGAATGAATG--------AATCAGTAACTTCTGAT------ 498
consensus_9637#5      ACTCATATATGCTGTAATTTGAATGAATGAATGAATAAATCAGTAACTTCTGACGATGTT 286
consensus_9637#1      ACTCATATATGCTGTAATTTGAATGAATGAATG----AATCAGTA--------------- 649
consensus_9637#4      AGCAATT--GTTTTTAGTTATGTT------------------------------------ 348
                      *   **         * **    *                                    

consensus_9637#0      -TTATGACTGCAC------------- 672
consensus_9637#2      GTTGCAAATGTCTAAAAAAAAAA--- 602
consensus_9637#3      --------------------------
consensus_9637#5      TTNTAAAAAAAAAAAAAAAAAAAAAA 312
consensus_9637#1      --------------------------
consensus_9637#4      --------------------------
                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)