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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9686#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 4202 fasta sequence
[TCCACCGAACTCTTCCACTCCTCCGCATCTCGCGATCTCTTCCCCCCCCCCCCCCCCGCGCGCCGCCTCTCTCCGGCGAACCCCTCACCGGCGGCGGCGGCGGGGCGAGTGGGACGCCGCATGGAGCAGTAGGGGACGGAGCGGAGGCTGCGTGAGGTGAAGGGCGGGCGCGGTGGCGATGGCGAACTACCTCGCGCAGTTCCAGACCATCAAGTCCTCCTGCGACCGCATCGTCGTCGCCGTTGAAGATGTGAGTGACTTGTGGCTCAATGTGAAAGAAAGTTTCGAGCAACGCTTACCAGTGAAGAAGGCCTGCCTCAATAACAAGGCGAGGAATCCTGTTTTTGTGGAAAACCTACCAGCTGAGTTTATACAGACCACTGATTCGAGGCTACGTAGTCGATTTCCACAAGATCAATACTTGTTTTGGTTCCGGGAACCATATGCAACTGTTGTTCTTGTCAGTTGCGAGGATCTTGATGAGTTCAAGACCATTCTTAAGCCTCGCCTCAAATTGATTGTGCAAAATGATGAGAGGGAATGGTTCATTGTATTTGTGTCTAAGGCCCATCCTAGCAATGACCAAGCATCTAAGATGGCAAAGAGAGTATATGCTAGGCTTGAGAGCGATTTCAACACTAAAAAAAGAGAAAGATGCTGTAAATTTGATCTCCATGGACCTGATGCGGAATTCTGGGATGATTTTGACTCCAAAATGGTGGACTGCATTAGAAACACATTGGATAGGCGGGTTCAATTTTATGAAGAGGAAATTCGCAGGTTAAGTGAGCAGAGATTCACTCCGATATGGAACTTCTGCAACTTTTTTATTCTTAAGGAAAGCTTGGCTTTCATGTTTGAGATGACTAATCTTCATGAAGATTCACTCCGTGAATACGACGAGCTTGAACTATGCTACTCAGAATCAGTTAATTCTCCTGGAAAACATCGAGAATTTGGAGGATTGGATACTGGTGATGATCAAGCGGCGCTGCTAAATCCAGGATTTAAAGCATTGACCCAAATTGTCCAGGATGATGTGTTCAGAGAATTTGAGTTTAGACAATACATATTTGCTTGCCAGGCTAAGTTATTGTTTAAATTGCATCGCCCAATTGAGGTTGCTGCAAGAGGATATGCTTTTGTGGTTAGCTTTTCCAAGACGCTAGCCTTGCAGGAGAATGGTCTACCATTTTGTTTTCGTGAAGTATGGGTGATAACTGCATGTATGGATTTAATAAAAGCAACAACCTCACACTATGATGGTACAGCTGTTGCTATCGACTCAGAGAGGGAGTTCTGTCGTATTCAGGGTGACCTCTATTCTCTGTGCCGTATTAAGTTTCTGAGGCTTGCTTATTTGATTGGTTATGGAGTTGAGATAGAAAAAAGTCCAGTCAACAGTGCATCTTTAAGCATGCTACCATGGCCAAAGCCAGCTACATGGCCTTCTATTCCACCGGATTCATCAGCAGAAACAATGGCAAAGGAGAAGATGATTCTCCAAGCAAAATCAAGAGAAAAGATCTTCAATATTCACAGGAAACCACTGCCATTAGAACCTTCTTTGCTTCTTCGTGAGGCTAATAGGCGTAGGGCTTTTCTTTCTGTTGGAAATATATCTGAATTATATGATTCAGGTGATGGTTCAGGTCTGGATGCAAATTCAAAACCTTCGCCCAACAAATCTGCTTCGAACTACATGGCCAGGACAATGTCAGGGCCAGCGACATCTGAGACTTCTCTGCCAGTTGATCGCCCCATGAGGTTGTCAGAAATTCATGTTGCAGCTGAGCATGCACTGAAGCAGACAGTATCTGACCCTAATTTTATGACATCACTTTCATCACTAGAAGAATTTGAGAAAAGATATATGGAGCTTACTAAAGGCGCAGCTGACAATTATCATCACTCTTGGTGGAAAAGACATGGAGTTGTGCTAGATGGAGAAATTGCAGCTCTATTCTTTAAGCATGAAAATTATGATTTGGCTGCAAAGTCCTATGAGAAAGTTTGTGCTCTCTATTCTGCAGAAGGCTGGGAAGAGCTGTTGGCAGATGTTCTTCCTGATCTTGCAGAATGCCAGAAGATTCTCAATGATGAAGCTGGTTATTTGACTTCCTGTGTGAAGTTACTTTCTCTAGAGAGTGGCTTATTTTCATCTAAAGAGCGGCAAGCTTTCCAGTCAGAGGTTGTTCGGCTTGCTCACAGTGAAATGAAGCATCCTGTGCCCCTTGATGTCTCATCACTTATTACATTTGCTGGAAATCCTGCTCCACCACTAGAGTTGTGTGATGGAGATCCTGGTACACTATCTGTAGCTGTTTGGAGTGCCTTCCCGGATGACATCACACTCGAGTCTCTCAGCTTAAGATTGTCGGCTTCCTCTAGTGCAGATGAAGGTCTTAAGGCGATAAAGAGTTCAGATGCTCGAGTTCTTGTACCCGGTAGAAATATCATCACCTTCGACATTCCTCCTCAAAAGCCTGGATCCTATGTGTTGGGTGCTCTGACGGGCCAGATTGGCAAGCTATCATTCAGATCGCATGGATTTTCTCAAGATGGTCCAGTGGACACTGATGAATTCATGAGCTTTGAGAAGCCAACAAGGCCTGTTTTGAAGGTGAGAAAACCAAGGGCTTTAGTTGATATTACTCCTGCTGTGTCCTCTGCATTGCTTATGAATGAACTTCAGTGGATTGGGTTAATTGTCAAGCCAATAGACTATTCTTTGAAAGATGGCATATTGCATATAGATGCGGGTGCTGGACTGAAAATTGAGGAGTCCCAGATGATTGAGATAGAAACTTATGGAAGTGATGTGGAGCATGTTGGTGGTACTGATGCTTCCAAGACATCATCAAGCTCCACTGATACTCGTAAGGTTGAGAAGGTCCCTATTGAAGATGGGAAGATAAAAATACCAGACTGGGCTAGTGATGTGACTACTCTTGTATGGTTTCCTGTTCGTGCTATTGATGATACAATTGCAAGGGGTGCATCGCCAGCATCCCCTCAGAAACAGAGCATAGTAGATGGGATGAGAATGATTGCTCTCAAGCTTGAATTTGGAGTTTTTCTTAATCAAGTGTTTGAAAGGACTATCGCAGTACATTTCACTAACCCATTCCATGTGAGCACACGCGTAGTAGATAAGTGCTATGATGGAACTCTACTACTGCAGGTGATATTGCATTCTGAAGTGAAGGCCACTCTGCATGTAAAGGATATATGGTTGGATCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGACGACCAACTTCGAACTTGTTCCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGCCTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGC-TACGTCCAT-CCGCCGCAGCTGGGCCTG-CCGCACGTCGGCGAGGCCAACATCAGCTGCAACCCGGCAGGCCCTCACCTGGTGT-GCGTCCTTCCTCCGACACTGAGCACCTCATACTGCATACCGGCTTGAT-CCATCCATCATACACAGATTGTATGTTAGGCTTGTAGCCTGTAGTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCCATTTGCACCGGATGAGATGTATGCTGTTTTTGCCGAGACATTCTTTT-GTGC--AGATGAGTTCTTTTTCGTCAGTAACATTCAGAACGTGTTCCATTGTTTCATGTACCATAAGATAAGTAACATAATTCTCCGTGTATATCAAATCAAGTGATAGACTGGATTTTGAAGTCTACCAGAATTCCGGCACAAGAGTTA]
[+] EMBL AK072345 [TCCACCGAACTCTTCCACTCCTCCGCATCTCGCGATCTCTTCCCCCCCCCCCCCCCCGCGCGCCGCCTCTCTCCGGCGAACCCCTCACCGGCGGCGGCGGCGGGGCGAGTGGGACGCCGCATGGAGCAGTAGGGGACGGAGCGGAGGCTGCGTGAGGTGAAGGGCGGGCGCGGTGGCGATGGCGAACTACCTCGCGCAGTTCCAGACCATCAAGTCCTCCTGCGACCGCATCGTCGTCGCCGTTGAAGATGTGAGTGACTTGTGGCTCAATGTGAAAGAAAGTTTCGAGCAACGCTTACCAGTGAAGAAGGCCTGCCTCAATAACAAGGCGAGGAATCCTGTTTTTGTGGAAAACCTACCAGCTGAGTTTATACAGACCACTGATTCGAGGCTACGTAGTCGATTTCCACAAGATCAATACTTGTTTTGGTTCCGGGAACCATATGCAACTGTTGTTCTTGTCAGTTGCGAGGATCTTGATGAGTTCAAGACCATTCTTAAGCCTCGCCTCAAATTGATTGTGCAAAATGATGAGAGGGAATGGTTCATTGTATTTGTGTCTAAGGCCCATCCTAGCAATGACCAAGCATCTAAGATGGCAAAGAGAGTATATGCTAGGCTTGAGAGCGATTTCAACACTAAAAAAAGAGAAAGATGCTGTAAATTTGATCTCCATGGACCTGATGCGGAATTCTGGGATGATTTTGACTCCAAAATGGTGGACTGCATTAGAAACACATTGGATAGGCGGGTTCAATTTTATGAAGAGGAAATTCGCAGGTTAAGTGAGCAGAGATTCACTCCGATATGGAACTTCTGCAACTTTTTTATTCTTAAGGAAAGCTTGGCTTTCATGTTTGAGATGACTAATCTTCATGAAGATTCACTCCGTGAATACGACGAGCTTGAACTATGCTACTCAGAATCAGTTAATTCTCCTGGAAAACATCGAGAATTTGGAGGATTGGATACTGGTGATGATCAAGCGGCGCTGCTAAATCCAGGATTTAAAGCATTGACCCAAATTGTCCAGGATGATGTGTTCAGAGAATTTGAGTTTAGACAATACATATTTGCTTGCCAGGCTAAGTTATTGTTTAAATTGCATCGCCCAATTGAGGTTGCTGCAAGAGGATATGCTTTTGTGGTTAGCTTTTCCAAGACGCTAGCCTTGCAGGAGAATGGTCTACCATTTTGTTTTCGTGAAGTATGGGTGATAACTGCATGTATGGATTTAATAAAAGCAACAACCTCACACTATGATGGTACAGCTGTTGCTATCGACTCAGAGAGGGAGTTCTGTCGTATTCAGGGTGACCTCTATTCTCTGTGCCGTATTAAGTTTCTGAGGCTTGCTTATTTGATTGGTTATGGAGTTGAGATAGAAAAAAGTCCAGTCAACAGTGCATCTTTAAGCATGCTACCATGGCCAAAGCCAGCTACATGGCCTTCTATTCCACCGGATTCATCAGCAGAAACAATGGCAAAGGAGAAGATGATTCTCCAAGCAAAATCAAGAGAAAAGATCTTCAATATTCACAGGAAACCACTGCCATTAGAACCTTCTTTGCTTCTTCGTGAGGCTAATAGGCGTAGGGCTTTTCTTTCTGTTGGAAATATATCTGAATTATATGATTCAGGTGATGGTTCAGGTCTGGATGCAAATTCAAAACCTTCGCCCAACAAATCTGCTTCGAACTACATGGCCAGGACAATGTCAGGGCCAGCGACATCTGAGACTTCTCTGCCAGTTGATCGCCCCATGAGGTTGTCAGAAATTCATGTTGCAGCTGAGCATGCACTGAAGCAGACAGTATCTGACCCTAATTTTATGACATCACTTTCATCACTAGAAGAATTTGAGAAAAGATATATGGAGCTTACTAAAGGCGCAGCTGACAATTATCATCACTCTTGGTGGAAAAGACATGGAGTTGTGCTAGATGGAGAAATTGCAGCTCTATTCTTTAAGCATGAAAATTATGATTTGGCTGCAAAGTCCTATGAGAAAGTTTGTGCTCTCTATTCTGCAGAAGGCTGGGAAGAGCTGTTGGCAGATGTTCTTCCTGATCTTGCAGAATGCCAGAAGATTCTCAATGATGAAGCTGGTTATTTGACTTCCTGTGTGAAGTTACTTTCTCTAGAGAGTGGCTTATTTTCATCTAAAGAGCGGCAAGCTTTCCAGTCAGAGGTTGTTCGGCTTGCTCACAGTGAAATGAAGCATCCTGTGCCCCTTGATGTCTCATCACTTATTACATTTGCTGGAAATCCTGCTCCACCACTAGAGTTGTGTGATGGAGATCCTGGTACACTATCTGTAGCTGTTTGGAGTGCCTTCCCGGATGACATCACACTCGAGTCTCTCAGCTTAAGATTGTCGGCTTCCTCTAGTGCAGATGAAGGTCTTAAGGCGATAAAGAGTTCAGATGCTCGAGTTCTTGTACCCGGTAGAAATATCATCACCTTCGACATTCCTCCTCAAAAGCCTGGATCCTATGTGTTGGGTGCTCTGACGGGCCAGATTGGCAAGCTATCATTCAGATCGCATGGATTTTCTCAAGATGGTCCAGTGGACACTGATGAATTCATGAGCTTTGAGAAGCCAACAAGGCCTGTTTTGAAGGTGAGAAAACCAAGGGCTTTAGTTGATATTACTCCTGCTGTGTCCTCTGCATTGCTTATGAATGAACTTCAGTGGATTGGGTTAATTGTCAAGCCAATAGACTATTCTTTGAAAGATGGCATATTGCATATAGATGCGGGTGCTGGACTGAAAATTGAGGAGTCCCAGATGATTGAGATAGAAACTTATGGAAGTGATGTGGAGCATGTTGGTGGTACTGATGCTTCCAAGACATCATCAAGCTCCACTGATACTCGTAAGGTTGAGAAGGTCCCTATTGAAGATGGGAAGATAAAAATACCAGACTGGGCTAGTGATGTGACTACTCTTGTATGGTTTCCTGTTCGTGCTATTGATGATACAATTGCAAGGGGTGCATCGCCAGCATCCCCTCAGAAACAGAGCATAGTAGATGGGATGAGAATGATTGCTCTCAAGCTTGAATTTGGAGTTTTTCTTAATCAAGTGTTTGAAAGGACTATCGCAGTACATTTCACTAACCCATTCCATGTGAGCACACGCGTAGTAGATAAGTGCTATGATGGAACTCTACTACTGCAGGTGATATTGCATTCTGAAGTGAAGGCCACTCTGCATGTAAAGGATATATGGTTGGATCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGACGACCAACTTCGAACTTGTTCCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGCCTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGC TACGTCCAT CCGCCGCAGCTGGGCCTG CCGCACGTCGGCGAGGCCAACATCAGCTGCAACCCGGCAGGCCCTCACCTGGTGT GCGTCCTTCCTCCGACACTGAGCACCTCATACTGCATACCGGCTTGAT CCATCCATCATACACAGATTGTATGTTAGGCTTGTAGCCTGTAGTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCCATTTGCACCGGATGAGATGTATGCTGTTTTTGCCGAGACATTCTTTT GTGC AGATGAGTTCTTTTTCGTCAGTAACATTCAGAACGTGTTCCATTGTTTCATGTACCATAAGATAAGTAACATAATTCTCCGTGTATATCAAATCAAGTGATAGACTGGAT ]
[+] EMBL AK104059 [ CTTTGAAAGATGGCATATTGCATATAGATGCGGGTGCTGGACTGAAAATTGAGGAGTCCCAGATGATTGAGATAGAAACTTATGGAAGTGATGTGGAGCATGTTGGTGGTACTGATGCTTCCAAGACATCATCAAGCTCCACTGATACTCGTAAGGTTGAGAAGGTCCCTATTGAAGATGGGAAGATAAAAATACCAGACTGGGCTAGTGATGTGACTACTCTTGTATGGTTTCCTGTTCGTGCTATTGATGATACAATTGCAAGGGGTGCATCGCCAGCATCCCCTCAGAAACAGAGCATAGTAGATGGGATGAGAATGATTGCTCTCAAGCTTGAATTTGGAGTTTTTCTTAATCAAGTGTTTGAAAGGACTATCGCAGTACATTTCACTAACCCATTCCATGTGAGCACACGCGTAGTAGATAAGTGCTATGATGGAACTCTACTACTGCAGGTGATATTGCATTCTGAAGTGAAGGCCACTCTGCATGTAAAGGATATATGGTTGGATCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGACGACCAACTTCGAACTTGTTCCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGCCTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGC TACGTCCAT CCGCCGCAGCTGGGCCTG CCGCACGTCGGCGAGGCCAACATCAGCTGCAACCCGGCAGGCCCTCACCTGGTGT GCGTCCTTCCTCCGACACTGAGCACCTCATACTGCATACCGGCTTGAT CCATCCATCATACACAGATTGTATGTTAGGCTTGTAGCCTGTAGTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCCATTTGCACCGGATGAGATGTATGCTGTTTTTGCCGAGACATTCTTTT GTGC AGATGAGTTCTTTTTCGTCAGTAACATTCAGAACGTGTTCCATTGTTTCATGTACCATAAGATAAGTAACATAATTCTCCGTGTATATCAAATCAAGTGATAGACTGGATTTTGAAGTCTACCAGAATTCCGGCACAAGAGTTA]
[+] EMBL OSR25451A [ AGATGCGGGTGCTGGACTGAAAATTGAGGAGTCCCAGATGATTGAGATAGAAACTTATGGAAGTGATGTGGAGCATGTTGGTGGTACTGATGCTTCCAAGACATCATCAAGCTCCACTGATACTCGTAAGGTTGAGAAGGTCCCTATTGAAGATGGGAAGATAAAAATACCAGACTGGGCTAGTGATGTGACTACTCTTGTATGGTTTCCTGTTCGTGCTATTGATGATACAATTGCAAGGGGTGCATCGCCAGCATCCCCTCAGAAACAGAGCATAGTAGATGGGATGAGAATGATTGCTCTCAAGCTTGAATTTGGAGTTTTTCTTAATCAAGTGTTTGAAAGGNCTATCGCAGTACATTTCACTAACCCATTCCATG ]
[+] EMBL BE041111 [ ATATATGGTTGGATCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGGCGACCAACTTCGAACTTGTTCCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGCCTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATACCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGCTTAC TCCATCCCGCCG AGCTTTGCCTG CCGAACGTTTGCGAGGTCAACATCATTTGAAACCCGGCAGGTCCTTACCTGGGGTGGCG CCCTCATTCGACACTGAGCACCTTATAC ]
[+] EMBL CA755587 [ GTTGGATCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGGCGACCAACTTCGAACTTGTTCCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGCCTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGC TACGTCCAT CCGCCGCAGCTGGGCCTGCCCGCACGTC GCGAGGCC ACATCATTTGAAACCCGGCAGGCCCTCACCTGGGGTGGCG CCCTCATTCGACACTGAGCACCTCATACTGCATACCGGGCTGATCCCAT CTTCAAAC CAGATTGTAGGTTAGGCTTGTACNCCGTAATANAAAAAAATTGCCAC TACCCTGGTCGGCTTGAGA GTATCCCCCTTGGCCCCGAAGAAAATGT TGCTGTTTTTGCCAAAAATTTTTTTTGGGGCAAAAAAAATTTCTTTTTgcaaaa ]
consensusID : consensus_9686#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 816 fasta sequence
[GAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGTTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGCTACGTCCATCCGCCGCAGATGGGCCTGCCGCACGTCGGAGAGGCCAACATCAGCTGCAACCCGGCAGGCCCTCACCTGGTGTGCGTCCTTCCTCTGACACTGAGCACCTCATACTGCATACCGGCTGGATCCATCCATCATACCCAGATTGTATGTTAGGCTTGTAGCCTGTAGTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCTCATTTGCACCGTGATGATGATGTATGCTGTTTTTGCCGAGACATTCTTTTGTGCAGATGAGTTCTTTTTCGTCAGTAACATTCAGACCGTGTTCCATTGTTTCATGTCCCATAAGATAAGTAACATAATTCTCCGTGAAGGTCAAATCAAGTGATAGCCTGGATTTTGAAGTCTCTTAAAAGGGA]
[-] EMBL CB665323 [GAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGTTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGCTACGTCCATCCGCCGCAGATGGGCCTGCCGCACGTCGGAGAGGCCAACATCAGCTGCAACCCGGCAGGCCCTCACCTGGTGTGCGTCCTTCCTCTGACACTGAGCACCTCATACTGCATACCGGCTGGATCCATCCATCATACCCAGATTGTATGTTAGGCTTGTAGCCTGTAGTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCTCATTTGCACCGTGATGATGATGTATGCTGTTTTTGCCGAGACATTCTTTTGTGCAGATGAGTTCTTTTTCGTCAGTAACATTCAGACCGTGTTCCATTGTTTCATGTCCCATAAGATAAGTAACATAATTCTCCGTGAAGGTCAAATCAAGTGATAGCCTGGATTTTGAAGTCTCTTAAAAGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9686#0 TCCACCGAACTCTTCCACTCCTCCGCATCTCGCGATCTCTTCCCCCCCCCCCCCCCCGCG 60
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CGCCGCCTCTCTCCGGCGAACCCCTCACCGGCGGCGGCGGCGGGGCGAGTGGGACGCCGC 120
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 ATGGAGCAGTAGGGGACGGAGCGGAGGCTGCGTGAGGTGAAGGGCGGGCGCGGTGGCGAT 180
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GGCGAACTACCTCGCGCAGTTCCAGACCATCAAGTCCTCCTGCGACCGCATCGTCGTCGC 240
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CGTTGAAGATGTGAGTGACTTGTGGCTCAATGTGAAAGAAAGTTTCGAGCAACGCTTACC 300
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 AGTGAAGAAGGCCTGCCTCAATAACAAGGCGAGGAATCCTGTTTTTGTGGAAAACCTACC 360
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 AGCTGAGTTTATACAGACCACTGATTCGAGGCTACGTAGTCGATTTCCACAAGATCAATA 420
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CTTGTTTTGGTTCCGGGAACCATATGCAACTGTTGTTCTTGTCAGTTGCGAGGATCTTGA 480
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TGAGTTCAAGACCATTCTTAAGCCTCGCCTCAAATTGATTGTGCAAAATGATGAGAGGGA 540
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 ATGGTTCATTGTATTTGTGTCTAAGGCCCATCCTAGCAATGACCAAGCATCTAAGATGGC 600
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 AAAGAGAGTATATGCTAGGCTTGAGAGCGATTTCAACACTAAAAAAAGAGAAAGATGCTG 660
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TAAATTTGATCTCCATGGACCTGATGCGGAATTCTGGGATGATTTTGACTCCAAAATGGT 720
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GGACTGCATTAGAAACACATTGGATAGGCGGGTTCAATTTTATGAAGAGGAAATTCGCAG 780
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GTTAAGTGAGCAGAGATTCACTCCGATATGGAACTTCTGCAACTTTTTTATTCTTAAGGA 840
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 AAGCTTGGCTTTCATGTTTGAGATGACTAATCTTCATGAAGATTCACTCCGTGAATACGA 900
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CGAGCTTGAACTATGCTACTCAGAATCAGTTAATTCTCCTGGAAAACATCGAGAATTTGG 960
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 AGGATTGGATACTGGTGATGATCAAGCGGCGCTGCTAAATCCAGGATTTAAAGCATTGAC 1020
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CCAAATTGTCCAGGATGATGTGTTCAGAGAATTTGAGTTTAGACAATACATATTTGCTTG 1080
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CCAGGCTAAGTTATTGTTTAAATTGCATCGCCCAATTGAGGTTGCTGCAAGAGGATATGC 1140
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TTTTGTGGTTAGCTTTTCCAAGACGCTAGCCTTGCAGGAGAATGGTCTACCATTTTGTTT 1200
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TCGTGAAGTATGGGTGATAACTGCATGTATGGATTTAATAAAAGCAACAACCTCACACTA 1260
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TGATGGTACAGCTGTTGCTATCGACTCAGAGAGGGAGTTCTGTCGTATTCAGGGTGACCT 1320
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CTATTCTCTGTGCCGTATTAAGTTTCTGAGGCTTGCTTATTTGATTGGTTATGGAGTTGA 1380
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GATAGAAAAAAGTCCAGTCAACAGTGCATCTTTAAGCATGCTACCATGGCCAAAGCCAGC 1440
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TACATGGCCTTCTATTCCACCGGATTCATCAGCAGAAACAATGGCAAAGGAGAAGATGAT 1500
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TCTCCAAGCAAAATCAAGAGAAAAGATCTTCAATATTCACAGGAAACCACTGCCATTAGA 1560
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 ACCTTCTTTGCTTCTTCGTGAGGCTAATAGGCGTAGGGCTTTTCTTTCTGTTGGAAATAT 1620
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 ATCTGAATTATATGATTCAGGTGATGGTTCAGGTCTGGATGCAAATTCAAAACCTTCGCC 1680
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CAACAAATCTGCTTCGAACTACATGGCCAGGACAATGTCAGGGCCAGCGACATCTGAGAC 1740
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TTCTCTGCCAGTTGATCGCCCCATGAGGTTGTCAGAAATTCATGTTGCAGCTGAGCATGC 1800
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 ACTGAAGCAGACAGTATCTGACCCTAATTTTATGACATCACTTTCATCACTAGAAGAATT 1860
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TGAGAAAAGATATATGGAGCTTACTAAAGGCGCAGCTGACAATTATCATCACTCTTGGTG 1920
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GAAAAGACATGGAGTTGTGCTAGATGGAGAAATTGCAGCTCTATTCTTTAAGCATGAAAA 1980
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TTATGATTTGGCTGCAAAGTCCTATGAGAAAGTTTGTGCTCTCTATTCTGCAGAAGGCTG 2040
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GGAAGAGCTGTTGGCAGATGTTCTTCCTGATCTTGCAGAATGCCAGAAGATTCTCAATGA 2100
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TGAAGCTGGTTATTTGACTTCCTGTGTGAAGTTACTTTCTCTAGAGAGTGGCTTATTTTC 2160
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 ATCTAAAGAGCGGCAAGCTTTCCAGTCAGAGGTTGTTCGGCTTGCTCACAGTGAAATGAA 2220
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GCATCCTGTGCCCCTTGATGTCTCATCACTTATTACATTTGCTGGAAATCCTGCTCCACC 2280
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 ACTAGAGTTGTGTGATGGAGATCCTGGTACACTATCTGTAGCTGTTTGGAGTGCCTTCCC 2340
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GGATGACATCACACTCGAGTCTCTCAGCTTAAGATTGTCGGCTTCCTCTAGTGCAGATGA 2400
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 AGGTCTTAAGGCGATAAAGAGTTCAGATGCTCGAGTTCTTGTACCCGGTAGAAATATCAT 2460
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CACCTTCGACATTCCTCCTCAAAAGCCTGGATCCTATGTGTTGGGTGCTCTGACGGGCCA 2520
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GATTGGCAAGCTATCATTCAGATCGCATGGATTTTCTCAAGATGGTCCAGTGGACACTGA 2580
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TGAATTCATGAGCTTTGAGAAGCCAACAAGGCCTGTTTTGAAGGTGAGAAAACCAAGGGC 2640
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TTTAGTTGATATTACTCCTGCTGTGTCCTCTGCATTGCTTATGAATGAACTTCAGTGGAT 2700
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TGGGTTAATTGTCAAGCCAATAGACTATTCTTTGAAAGATGGCATATTGCATATAGATGC 2760
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GGGTGCTGGACTGAAAATTGAGGAGTCCCAGATGATTGAGATAGAAACTTATGGAAGTGA 2820
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TGTGGAGCATGTTGGTGGTACTGATGCTTCCAAGACATCATCAAGCTCCACTGATACTCG 2880
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TAAGGTTGAGAAGGTCCCTATTGAAGATGGGAAGATAAAAATACCAGACTGGGCTAGTGA 2940
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TGTGACTACTCTTGTATGGTTTCCTGTTCGTGCTATTGATGATACAATTGCAAGGGGTGC 3000
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 ATCGCCAGCATCCCCTCAGAAACAGAGCATAGTAGATGGGATGAGAATGATTGCTCTCAA 3060
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GCTTGAATTTGGAGTTTTTCTTAATCAAGTGTTTGAAAGGACTATCGCAGTACATTTCAC 3120
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TAACCCATTCCATGTGAGCACACGCGTAGTAGATAAGTGCTATGATGGAACTCTACTACT 3180
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 GCAGGTGATATTGCATTCTGAAGTGAAGGCCACTCTGCATGTAAAGGATATATGGTTGGA 3240
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 TCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGACGACCAACTTCGAACTTGTT 3300
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGC 3360
consensus_9686#1 ------------------------------------------------------------
consensus_9686#0 CTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAAT 3420
consensus_9686#1 ----------------GAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAAT 44
********************************************
consensus_9686#0 ATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGA 3480
consensus_9686#1 ATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGA 104
************************************************************
consensus_9686#0 GGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGC 3540
consensus_9686#1 GGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGC 164
************************************************************
consensus_9686#0 AGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAG 3600
consensus_9686#1 AGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAG 224
************************************************************
consensus_9686#0 ATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACT 3660
consensus_9686#1 ATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACT 284
************************************************************
consensus_9686#0 TTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGT 3720
consensus_9686#1 TTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGTTGGGAGGAAATGCGGTCACGT 344
************************************** *********************
consensus_9686#0 ATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGT 3780
consensus_9686#1 ATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGT 404
************************************************************
consensus_9686#0 GTCCGGCTACGTCCATCCGCCGCAGCTGGGCCTGCCGCACGTCGGCGAGGCCAACATCAG 3840
consensus_9686#1 GTCCGGCTACGTCCATCCGCCGCAGATGGGCCTGCCGCACGTCGGAGAGGCCAACATCAG 464
************************* ******************* **************
consensus_9686#0 CTGCAACCCGGCAGGCCCTCACCTGGTGTGCGTCCTTCCTCCGACACTGAGCACCTCATA 3900
consensus_9686#1 CTGCAACCCGGCAGGCCCTCACCTGGTGTGCGTCCTTCCTCTGACACTGAGCACCTCATA 524
***************************************** ******************
consensus_9686#0 CTGCATACCGGCTTGATCCATCCATCATACACAGATTGTATGTTAGGCTTGTAGCCTGTA 3960
consensus_9686#1 CTGCATACCGGCTGGATCCATCCATCATACCCAGATTGTATGTTAGGCTTGTAGCCTGTA 584
************* **************** *****************************
consensus_9686#0 GTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGC-CATTTGCACCG-G 4018
consensus_9686#1 GTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCTCATTTGCACCGTG 644
********************************************** *********** *
consensus_9686#0 ATGA-GATGTATGCTGTTTTTGCCGAGACATTCTTTTGTGCAGATGAGTTCTTTTTCGTC 4077
consensus_9686#1 ATGATGATGTATGCTGTTTTTGCCGAGACATTCTTTTGTGCAGATGAGTTCTTTTTCGTC 704
**** *******************************************************
consensus_9686#0 AGTAACATTCAGAACGTGTTCCATTGTTTCATGTACCATAAGATAAGTAACATAATTCTC 4137
consensus_9686#1 AGTAACATTCAGACCGTGTTCCATTGTTTCATGTCCCATAAGATAAGTAACATAATTCTC 764
************* ******************** *************************
consensus_9686#0 CGTGTATATCAAATCAAGTGATAGACTGGATTTTGAAGTCTACCAGAATTCCGGCACAAG 4197
consensus_9686#1 CGTGAAGGTCAAATCAAGTGATAGCCTGGATTTTGAAGTCTCTTAAAA----GGGA---- 816
**** * **************** **************** * ** ** *
consensus_9686#0 AGTTA 4202
consensus_9686#1 -----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||