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Oryza sativa
cluster # 9696 cluster # 9696       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9696#0 length = 2061 sequences # 4  
consensus_9696#1 length = 837 sequences # 1  
consensus_9696#2 length = 513 sequences # 1  

consensusID : consensus_9696#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2061
fasta sequence
                              [GTGTCGCCGTCTCGCCGAGCGAACCCGACGTCGTCGGCGATGAGGAAGGCGGCGGCGCTGGCGTCCGCGGCGATGGCCGCAGCAGCAGTAGCGGTAGTCTCCACGGTGTTGCACCAGAGGCAACGTCGGGCGGCGAAGCGGTCAGAGCGCGCGGAGGCCGTGCTGCTGCGGGACCTGCAGGAGCGGTGCGCCGCGCCGGTGGAGCTGCTGCGGCAGGTGGCGGACGCGATGGCCGCGGAGATGCGCGCGGGGCTCGCCGCCGAGGGCGGGAGCGACCTCCAGATGCTCGTCACCTACGTTGACTCCCTCCCCTCCGGGGGTGAGAAAGGGATGTTTTATGCACTTGACCTTGGAGGAACAAATTTCCGTGTTTTACGAGTTCAATTAGGAGGCAAAGAACGTCGAATTATCAAGCAAGACTCAGAAGGGATATCCATTCCACAACATTTAATGTCCAGCAGTTCACATGAGTTGTTTGATTTTGTTGCTGTGGCTTTAGCAAAATTTGTTGCCTCTGAAGGTGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCGGCAAGGATGTTGTGGCTGAATTAAACATGGCTATCAGAAGTCAAGGACTTGATATGAAAGTCACAGCATTGGTTAATGATACAGTAGGGACATTAGCTGCTGGGAGATATGTGAATCATGATACTATTGCTGCTGTTATACTGGGAACAGGTAGTAATGCAGCGTACATAGATCATGCAGATGCAATTCCAAAATGGCATGGATCCCTGCCCAAGTCTGGAAATATGGTGTGTTTTTTCAGTCCATACTTCTGTAGTTCTGTTTGCTAGTTAGTCCGTCTCCCATTATCCCAAGGTACAAGGCATGCAAAAGATCATGCTTAGCAGTTTATATTGTTTGTAGTCTTGCGCGAATAAGAAAAGGCAACAATAAAATATAAGAGGGACTTTTGCATTGTTGATAATTTTGACGTGTTTATTTGTTAGTTTCTTTGCTTTGGTAAAAGGTAATAAACATGGAATGGGGTAACTTTAAGTCCTCACATCTTCCACTTACTGAATTTGATCAAGAGTTGGATGCAGAAAGTTTGAACCCTGGCAAACAGGTTTACGAGAAATCGATTTCTGGTATGTATATGGGGGAACTTGTTCGAAGAATCTTACTAAAGATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCATACATCTTAAGGACACTTGACATGCTGATCATGCATCATGATACATCATCTGATCTCAGAACAGTTGCCAACAAGTTGAAAGAAGTCTTGGGGATCGAATATACCTCTTTCACGACGAGGAAACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGCTGCTGGGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTCTGTTATGATCAAGCATGTCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACCAGGCTGAATCTGCAGATAGTTCATAATATTCTAAAAAAAAGAAGCTGAATCTGCAGATAGCTCTTAA-TATTCTGAAAAAACTGTCAAAAAATAATATTCTGAAAAAAAACTGTGTATTAAGGTGATAAACAATAGGTTTTGGAGCAA-TTTTTTTTTAAGATAGTGGATTAAACCGGCCTCTACATCCAAACGAGATTCTAGAGCAATAGCA-GCTATACAGTTTGCCTATGGGCTAAATATCTTGTATTTTGCAAATGTCAATTGTACATGAACTCTATCTGCAATATCTGTTCAGTGTTTCAGTGGGTCATAGACACTGTG]

[+] EMBL AK069917             [GTGTCGCCGTCTCGCCGAGCGAACCCGACGTCGTCGGCGATGAGGAAGGCGGCGGCGCTGGCGTCCGCGGCGATGGCCGCAGCAGCAGTAGCGGTAGTCTCCACGGTGTTGCACCAGAGGCAACGTCGGGCGGCGAAGCGGTCAGAGCGCGCGGAGGCCGTGCTGCTGCGGGACCTGCAGGAGCGGTGCGCCGCGCCGGTGGAGCTGCTGCGGCAGGTGGCGGACGCGATGGCCGCGGAGATGCGCGCGGGGCTCGCCGCCGAGGGCGGGAGCGACCTCCAGATGCTCGTCACCTACGTTGACTCCCTCCCCTCCGGGGGTGAGAAAGGGATGTTTTATGCACTTGACCTTGGAGGAACAAATTTCCGTGTTTTACGAGTTCAATTAGGAGGCAAAGAACGTCGAATTATCAAGCAAGACTCAGAAGGGATATCCATTCCACAACATTTAATGTCCAGCAGTTCACATGAGTTGTTTGATTTTGTTGCTGTGGCTTTAGCAAAATTTGTTGCCTCTGAAGGTGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCGGCAAGGATGTTGTGGCTGAATTAAACATGGCTATCAGAAGTCAAGGACTTGATATGAAAGTCACAGCATTGGTTAATGATACAGTAGGGACATTAGCTGCTGGGAGATATGTGAATCATGATACTATTGCTGCTGTTATACTGGGAACAGGTAGTAATGCAGCGTACATAGATCATGCAGATGCAATTCCAAAATGGCATGGATCCCTGCCCAAGTCTGGAAATATGGTGTGTTTTTTCAGTCCATACTTCTGTAGTTCTGTTTGCTAGTTAGTCCGTCTCCCATTATCCCAAGGTACAAGGCATGCAAAAGATCATGCTTAGCAGTTTATATTGTTTGTAGTCTTGCGCGAATAAGAAAAGGCAACAATAAAATATAAGAGGGACTTTTGCATTGTTGATAATTTTGACGTGTTTATTTGTTAGTTTCTTTGCTTTGGTAAAAGGTAATAAACATGGAATGGGGTAACTTTAAGTCCTCACATCTTCCACTTACTGAATTTGATCAAGAGTTGGATGCAGAAAGTTTGAACCCTGGCAAACAGGTTTACGAGAAATCGATTTCTGGTATGTATATGGGGGAACTTGTTCGAAGAATCTTACTAAAGATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCATACATCTTAAGGACACTTGACATGCTGATCATGCATCATGATACATCATCTGATCTCAGAACAGTTGCCAACAAGTTGAAAGAAGTCTTGGGGATCGAATATACCTCTTTCACGACGAGGAAACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGCTGCTGGGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTCTGTTATGATCAAGCATGTCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACCAGGCTGAATCTGCAGATAGTTCATAATATTCTAAAAAAAAGAAGCTGAATCTGCAGATAGCTCTTAA TATTCTGAAAAAACTGTCAAAAAATAATATTCTGAAAAAAAACTGTGTATTAAGGTGATAAACAATAGGTTTTGGAGCAATTTTTTTTTTAAGATAATGGATTAAACCGGCCTCTACATCCAAACGAGATTCTAGAGCAATAGCA GCTATACAGTTTGCCTAAGGGCTAAATATCTTGTATTTTGCAAATGTCAATTGTACATGAACTCTATCTGCAATATCTGTTCAGTGTTTCAGTGGGTCATAGACACTGTG]
[+] EMBL CF306053             [                                                                                                                                                                                                                             GGACGCGCTGGCCGCGGAGATGCGCGCGGGGCTCGCCGCCGAGGGCGGGAGCGACCTCCAGATGCTCGTCACCTACGTTGACTCCCTCCCCTCCGGGGGTGAGAAAGGGATGTTTTATGCACTTGACCTTGGATAATCAAATTTCCGTGTTTTACGAGTTCAATTAGGAGGCTAAGATCGTTGAATTATCAAGCAAGACTCAGAAGGGATATCCATTCCACAACATTTAATGTCCAGCAGTTCACATGAGTTGTTTGATTTTGTTGCTGTGGCTTTAGCAAAATTTGTTGCCTCTGAAGGTGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCGGCAAGGATGTTGTGGCTGAATTAAACATGGCTATCAGAAGTCAAGGACTTGATATGAAAGTCACAGCATTGGTTAATGATACAGTANGGACATTAGCTGCTGGGAGATATGTGAATCATGATACTATTGCTGCTGTTATACTGGGAACAGGTAGTAATGCAGCGTACATAGATCATGCAGATGCAATTCCAAAATGGCATGGATCCCTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM038246             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTTGAAT TTTGTGAGCCCATTGCGACACGC GTGCACGGCTTGCTGCTGCTGGGATATATGGCATTATCC AAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGTCCGTGATT CTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTCTGTTATGATCAAGCATGTCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACCAGGCTGAATCTGCAGATAGTTCATAATATTCTAAAAAAAAGAAGCTGAATCTGCAGATAGCTCTTAACTATTCTGAAAAAACTGTCAAAAAATAATATTCTGAAAAAAAACTGTGTATTAAGGTGATAAAC ATAGGTTTTGGAGCAA TTTTTTTTTAAGATAGTGGATTAAACCGGCCTCTACATCC AACGAGATTCTAGA C ATA CACCCTATACAGTTTGCCTATGGGCTAAAaaaaa                                                                               ]
[-] EMBL BE530915             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTCTGTTATGATCAAGCATGTCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTTTTATTNTCAATACCNCCAGGCTGAATCTGCAGATAGTTCATAATATTCTAAAAAAAAGAAGCTGAATCTGCAGATAGCTCTTAA TATTCTGAAAAAACTGTCAAAAAATAATATTNTGAAAAAAAACTGTGTATTAAGGTGATAAACAATAGGTTTTGGAGCAA TTTTTTTTTAAGATAGTGGATTAAACCGGCCTCTACATCCAAACGAGATTCTAGAGCAATAGCA GCTATACAGTTTGCCTATGGGCTAAATATCTTGTATTTTGCAAATGTCAATTGTACATGAACTCTATCTGCAATATCTGTTCAGTGTTT                     ]


>consensus_9696#0 GTGTCGCCGTCTCGCCGAGCGAACCCGACGTCGTCGGCGATGAGGAAGGCGGCGGCGCTG GCGTCCGCGGCGATGGCCGCAGCAGCAGTAGCGGTAGTCTCCACGGTGTTGCACCAGAGG CAACGTCGGGCGGCGAAGCGGTCAGAGCGCGCGGAGGCCGTGCTGCTGCGGGACCTGCAG GAGCGGTGCGCCGCGCCGGTGGAGCTGCTGCGGCAGGTGGCGGACGCGATGGCCGCGGAG ATGCGCGCGGGGCTCGCCGCCGAGGGCGGGAGCGACCTCCAGATGCTCGTCACCTACGTT GACTCCCTCCCCTCCGGGGGTGAGAAAGGGATGTTTTATGCACTTGACCTTGGAGGAACA AATTTCCGTGTTTTACGAGTTCAATTAGGAGGCAAAGAACGTCGAATTATCAAGCAAGAC TCAGAAGGGATATCCATTCCACAACATTTAATGTCCAGCAGTTCACATGAGTTGTTTGAT TTTGTTGCTGTGGCTTTAGCAAAATTTGTTGCCTCTGAAGGTGAAGACTGCCATCTTCCT GAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTG GCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCGGCAAG GATGTTGTGGCTGAATTAAACATGGCTATCAGAAGTCAAGGACTTGATATGAAAGTCACA GCATTGGTTAATGATACAGTAGGGACATTAGCTGCTGGGAGATATGTGAATCATGATACT ATTGCTGCTGTTATACTGGGAACAGGTAGTAATGCAGCGTACATAGATCATGCAGATGCA ATTCCAAAATGGCATGGATCCCTGCCCAAGTCTGGAAATATGGTGTGTTTTTTCAGTCCA TACTTCTGTAGTTCTGTTTGCTAGTTAGTCCGTCTCCCATTATCCCAAGGTACAAGGCAT GCAAAAGATCATGCTTAGCAGTTTATATTGTTTGTAGTCTTGCGCGAATAAGAAAAGGCA ACAATAAAATATAAGAGGGACTTTTGCATTGTTGATAATTTTGACGTGTTTATTTGTTAG TTTCTTTGCTTTGGTAAAAGGTAATAAACATGGAATGGGGTAACTTTAAGTCCTCACATC TTCCACTTACTGAATTTGATCAAGAGTTGGATGCAGAAAGTTTGAACCCTGGCAAACAGG TTTACGAGAAATCGATTTCTGGTATGTATATGGGGGAACTTGTTCGAAGAATCTTACTAA AGATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCAT ACATCTTAAGGACACTTGACATGCTGATCATGCATCATGATACATCATCTGATCTCAGAA CAGTTGCCAACAAGTTGAAAGAAGTCTTGGGGATCGAATATACCTCTTTCACGACGAGGA AACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGCTGCTG GGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGT CCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGG AGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTCTGTTATGATCAAGCATG TCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACC AGGCTGAATCTGCAGATAGTTCATAATATTCTAAAAAAAAGAAGCTGAATCTGCAGATAG CTCTTAATATTCTGAAAAAACTGTCAAAAAATAATATTCTGAAAAAAAACTGTGTATTAA GGTGATAAACAATAGGTTTTGGAGCAATTTTTTTTTAAGATAGTGGATTAAACCGGCCTC TACATCCAAACGAGATTCTAGAGCAATAGCAGCTATACAGTTTGCCTATGGGCTAAATAT CTTGTATTTTGCAAATGTCAATTGTACATGAACTCTATCTGCAATATCTGTTCAGTGTTT CAGTGGGTCATAGACACTGTG



consensusID : consensus_9696#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 837
fasta sequence
                              [GGGGGAGAAAATGATTTNTGGTATGTATATGGGGGAACTTGTTCGAAGAATCTTACTAAAGATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCATACATCTTAAGGACACTTGACATGCTGATCATGCATCATGATACATCATNCTGATCTCAGAACAGTTGCCAACAAGNTGNAAGAAGTCTTGGGGATCGAATATACCTCTTTCACGACGAGGAAACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGCTGCTGGGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTCTGNTATGATCAAGCATGTCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACCAGGCTGAATCTGCAGATAGTTCATAAATATTTCTAAAAAAAAGAAGCTGAATCTGCNGATAGCTCTTAATATTCTGAAAAAAACTGTCAAAAAATAATATTCTGAAAAAAAACTGNGTATTAAAGNGATAAACAATAGGGTTTTGGAACCAATTTTTTTTTTTAAAAAAAGNGGATTAAAACCGGGCCTTTACATCCCAAACGNGGATTCTAGAAGCAATAGGCAGCTNTACNAGGNTTGGCCTATTGGGCCTAAANATCCTTGGGNTTTTGCNAAAGGNCAATTGGNNCCNTGAAC]

[+] EMBL CA765421             [GGGGGAGAAAATGATTTNTGGTATGTATATGGGGGAACTTGTTCGAAGAATCTTACTAAAGATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCATACATCTTAAGGACACTTGACATGCTGATCATGCATCATGATACATCATNCTGATCTCAGAACAGTTGCCAACAAGNTGNAAGAAGTCTTGGGGATCGAATATACCTCTTTCACGACGAGGAAACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGCTGCTGGGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTCTGNTATGATCAAGCATGTCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACCAGGCTGAATCTGCAGATAGTTCATAAATATTTCTAAAAAAAAGAAGCTGAATCTGCNGATAGCTCTTAATATTCTGAAAAAAACTGTCAAAAAATAATATTCTGAAAAAAAACTGNGTATTAAAGNGATAAACAATAGGGTTTTGGAACCAATTTTTTTTTTTAAAAAAAGNGGATTAAAACCGGGCCTTTACATCCCAAACGNGGATTCTAGAAGCAATAGGCAGCTNTACNAGGNTTGGCCTATTGGGCCTAAANATCCTTGGGNTTTTGCNAAAGGNCAATTGGNNCCNTGAAC]


>consensus_9696#1 GGGGGAGAAAATGATTTNTGGTATGTATATGGGGGAACTTGTTCGAAGAATCTTACTAAA GATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCATA CATCTTAAGGACACTTGACATGCTGATCATGCATCATGATACATCATNCTGATCTCAGAA CAGTTGCCAACAAGNTGNAAGAAGTCTTGGGGATCGAATATACCTCTTTCACGACGAGGA AACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGCTGCTG GGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGT CCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGG AGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTCTGNTATGATCAAGCATG TCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACC AGGCTGAATCTGCAGATAGTTCATAAATATTTCTAAAAAAAAGAAGCTGAATCTGCNGAT AGCTCTTAATATTCTGAAAAAAACTGTCAAAAAATAATATTCTGAAAAAAAACTGNGTAT TAAAGNGATAAACAATAGGGTTTTGGAACCAATTTTTTTTTTTAAAAAAAGNGGATTAAA ACCGGGCCTTTACATCCCAAACGNGGATTCTAGAAGCAATAGGCAGCTNTACNAGGNTTG GCCTATTGGGCCTAAANATCCTTGGGNTTTTGCNAAAGGNCAATTGGNNCCNTGAAC



consensusID : consensus_9696#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 513
fasta sequence
                              [TGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCAGTTTTGTTACCTCACATATGTAAACCAAATGAAAATCCTAAGGAAGGATATCCAGCTTCATTGTGAATTTAAAAAAAAAACATGTCGTCCTGGATGGAAATTCACCAATTGTGAATTCTCTTTTAGTTCTGTTATATCTTATATATCCAATTAGTTGTGTATAACATACTTACTTGTTGCTTTGAAGGCAGGTCGGCAAGGATGTTGTGGCTGAATTAAACATGGCTATCAGAAGTCAAGGACTTGATATGAAAGTCACAGCATTGGTTAGCTTCTTTTGATATCCATCTTATGCTCAATAGGAGAAACACTGCTAGAAGATAATGTTGTGGCTATTGTCATGTTTTATTGCACTGGCCATACAAATTGAAGTGTAAAA]

[+] EMBL CF303826             [TGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCAGTTTTGTTACCTCACATATGTAAACCAAATGAAAATCCTAAGGAAGGATATCCAGCTTCATTGTGAATTTAAAAAAAAAACATGTCGTCCTGGATGGAAATTCACCAATTGTGAATTCTCTTTTAGTTCTGTTATATCTTATATATCCAATTAGTTGTGTATAACATACTTACTTGTTGCTTTGAAGGCAGGTCGGCAAGGATGTTGTGGCTGAATTAAACATGGCTATCAGAAGTCAAGGACTTGATATGAAAGTCACAGCATTGGTTAGCTTCTTTTGATATCCATCTTATGCTCAATAGGAGAAACACTGCTAGAAGATAATGTTGTGGCTATTGTCATGTTTTATTGCACTGGCCATACAAATTGAAGTGTAAAA]


>consensus_9696#2 TGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCC AGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAAT TGATGAAATGGTCAGTTTTGTTACCTCACATATGTAAACCAAATGAAAATCCTAAGGAAG GATATCCAGCTTCATTGTGAATTTAAAAAAAAAACATGTCGTCCTGGATGGAAATTCACC AATTGTGAATTCTCTTTTAGTTCTGTTATATCTTATATATCCAATTAGTTGTGTATAACA TACTTACTTGTTGCTTTGAAGGCAGGTCGGCAAGGATGTTGTGGCTGAATTAAACATGGC TATCAGAAGTCAAGGACTTGATATGAAAGTCACAGCATTGGTTAGCTTCTTTTGATATCC ATCTTATGCTCAATAGGAGAAACACTGCTAGAAGATAATGTTGTGGCTATTGTCATGTTT TATTGCACTGGCCATACAAATTGAAGTGTAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9696#0      GTGTCGCCGTCTCGCCGAGCGAACCCGACGTCGTCGGCGATGAGGAAGGCGGCGGCGCTG 60
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      GCGTCCGCGGCGATGGCCGCAGCAGCAGTAGCGGTAGTCTCCACGGTGTTGCACCAGAGG 120
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      CAACGTCGGGCGGCGAAGCGGTCAGAGCGCGCGGAGGCCGTGCTGCTGCGGGACCTGCAG 180
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      GAGCGGTGCGCCGCGCCGGTGGAGCTGCTGCGGCAGGTGGCGGACGCGATGGCCGCGGAG 240
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      ATGCGCGCGGGGCTCGCCGCCGAGGGCGGGAGCGACCTCCAGATGCTCGTCACCTACGTT 300
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      GACTCCCTCCCCTCCGGGGGTGAGAAAGGGATGTTTTATGCACTTGACCTTGGAGGAACA 360
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      AATTTCCGTGTTTTACGAGTTCAATTAGGAGGCAAAGAACGTCGAATTATCAAGCAAGAC 420
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      TCAGAAGGGATATCCATTCCACAACATTTAATGTCCAGCAGTTCACATGAGTTGTTTGAT 480
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      TTTGTTGCTGTGGCTTTAGCAAAATTTGTTGCCTCTGAAGGTGAAGACTGCCATCTTCCT 540
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      GAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTG 600
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      GCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCGGCAAG 660
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      GATGTTGTGGCTGAATTAAACATGGCTATCAGAAGTCAAGGACTTGATATGAAAGTCACA 720
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      GCATTGGTTAATGATACAGTAGGGACATTAGCTGCTGGGAGATATGTGAATCATGATACT 780
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      ATTGCTGCTGTTATACTGGGAACAGGTAGTAATGCAGCGTACATAGATCATGCAGATGCA 840
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      ATTCCAAAATGGCATGGATCCCTGCCCAAGTCTGGAAATATGGTGTGTTTTTTCAGTCCA 900
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      TACTTCTGTAGTTCTGTTTGCTAGTTAGTCCGTCTCCCATTATCCCAAGGTACAAGGCAT 960
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      GCAAAAGATCATGCTTAGCAGTTTATATTGTTTGTAGTCTTGCGCGAATAAGAAAAGGCA 1020
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      ACAATAAAATATAAGAGGGACTTTTGCATTGTTGATAATTTTGACGTGTTTATTTGTTAG 1080
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      TTTCTTTGCTTTGGTAAAAGGTAATAAACATGGAATGGGGTAACTTTAAGTCCTCACATC 1140
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      TTCCACTTACTGAATTTGATCAAGAGTTGGATGCAGAAAGTTTGAACCCTGGCAAACAGG 1200
consensus_9696#1      ------------------------------------------------------------
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      TTTACGAGAAATCGATTTCTGGTATGTATATGGGGGAACTTGTTCGAAGAATCTTACTAA 1260
consensus_9696#1      -GGGGGAGAAAATGATTTNTGGTATGTATATGGGGGAACTTGTTCGAAGAATCTTACTAA 59
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      AGATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCAT 1320
consensus_9696#1      AGATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCAT 119
consensus_9696#2      ----------TGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACT----AGGTTTT 46
                                 ***    **  * **  ***   **  *    * ****    **    *

consensus_9696#0      ACATCTTAAGGACACTTGACATGCTGATCAT--GCATCATGATACATCATC-TGATCTCA 1377
consensus_9696#1      ACATCTTAAGGACACTTGACATGCTGATCAT--GCATCATGATACATCATNCTGATCTCA 177
consensus_9696#2      ACATTCTCCTTTCCAGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACG 106
                      ****  *     *   *** *     *****  *****  *     * **   *    * 

consensus_9696#0      GAACAGTTGCCAACAAGTTGAAAGA--AGTCTTGGGGATCGAATATACCTCTTTCACGAC 1435
consensus_9696#1      GAACAGTTGCCAACAAGNTGNAAGA--AGTCTTGGGGATCGAATATACCTCTTTCACGAC 235
consensus_9696#2      AAGAGTTTTGCAATTGATGAAATGGTCAGTTTTGTT-ACCTCACATATGTAAACCA-AAT 164
                       *    **  ***        * *   *** ***   * *  * ***  *    **  * 

consensus_9696#0      GAGGAAACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGC 1495
consensus_9696#1      GAGGAAACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGC 295
consensus_9696#2      GAAAATCCTAAGGAAGGATATCC--AGCTTCATTGTGAATTTAAAAAAAAAACATGTCGT 222
                      **  *  **      **** *         ***** **          *   * **  * 

consensus_9696#0      TGCTGGGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAG 1555
consensus_9696#1      TGCTGGGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAG 355
consensus_9696#2      --CCTGGATG---GAAATTCACCAA-----TTGTGAATTCTCTTTTAGTTCTGTTATA-- 270
                        *  ****    *  ***  ****     * ** *    ***   **  *   **    

consensus_9696#0      AAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTG 1615
consensus_9696#1      AAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTG 415
consensus_9696#2      ------------TCTTATATATCCAATTAGTTGTGTATAACATACTTACTT-----GTTG 313
                                  *  * *  **  *      * *  ***  * **** ***       **

consensus_9696#0      CATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTCTGTTATGA-TCA 1674
consensus_9696#1      CATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTCTGNTATGA-TCA 474
consensus_9696#2      CTTTGAAGGCAGGTCGGCAAGGATGTTGTGGCTGAA-TTAAACATGGCTATCAGAAGTCA 372
                      * * **  ***    *      *** *  *** * *  *   *    **   *  * ***

consensus_9696#0      AGCATGTCA-ATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCC-TCTTATTCTCA 1732
consensus_9696#1      AGCATGTCA-ATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCC-TCTTATTCTCA 532
consensus_9696#2      AGGACTTGATATGAAAGTCACAGCATTGGTTAGCTTCTTTTGATATCCATCTTATGCTCA 432
                      ** *  * * ****  *     ** ****      ***  **  * ** ****** ****

consensus_9696#0      ATACCACCAGGCTGAATCTGCAGATAGTTCATAA-TATT-CTAAAAAAAAGAAGCTGAAT 1790
consensus_9696#1      ATACCACCAGGCTGAATCTGCAGATAGTTCATAAATATTTCTAAAAAAAAGAAGCTGAAT 592
consensus_9696#2      ATA----------------GGAGAAA---------CACTGCTAGAAGATA-ATGTTGTGG 466
                      ***                * *** *          * * *** ** * * * * **   

consensus_9696#0      CTGCAGATAGCTCTTAATATTCTGAAAAAA-CTGTCAAAAAATAATATTCTGAAAAAAAA 1849
consensus_9696#1      CTGCNGATAGCTCTTAATATTCTGAAAAAAACTGTCAAAAAATAATATTCTGAAAAAAAA 652
consensus_9696#2      CTATTGTCATGTTTTATTGCACTGGCCATACAAATTGAAGTGTAAAA------------- 513
                      **   *  *  * *** *   ***   * *    *  **   *** *             

consensus_9696#0      CTGTGTATTAAGGTGATAAACAATAGG-TTTTGGAGC-AATTTTTTTTT---AAGATAGT 1904
consensus_9696#1      CTGNGTATTAAAGNGATAAACAATAGGGTTTTGGAACCAATTTTTTTTTTTAAAAAAAGN 712
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      GGATTAAACC--GGCCTCTACATCC-AAACGAG-ATTCTAGA-GCAATAG-CAGCTATAC 1958
consensus_9696#1      GGATTAAAACCGGGCCTTTACATCCCAAACGNGGATTCTAGAAGCAATAGGCAGCTNTAC 772
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      A---GTTTGCCTATGGG--CTAAATATCTT--GTATTTTGCAAATG-TCAATTGTAC--A 2008
consensus_9696#1      NAGGNTTGGCCTATTGGGCCTAAANATCCTTGGGNTTTTGCNAAAGGNCAATTGGNNCCN 832
consensus_9696#2      ------------------------------------------------------------
                                                                                  

consensus_9696#0      TGAACTCTATCTGCAATATCTGTTCAGTGTTTCAGTGGGTCATAGACACTGTG 2061
consensus_9696#1      TGAAC------------------------------------------------ 837
consensus_9696#2      -----------------------------------------------------
                                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)