Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9709 cluster # 9709       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9709#0 length = 1608 sequences # 4  
consensus_9709#1 length = 469 sequences # 1  
consensus_9709#2 length = 297 sequences # 1  

consensusID : consensus_9709#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1608
fasta sequence
                              [CGATCGCTCGCTCGCTCGCACTTCAGTTCTGGCGGCGCGCGCGGTGGCAGGGCCGGCCATGACGAAGTCGGCCACCTCGCTCCTGCTCGGCGCGGCCCTCGCCACGGTCTTCTTCCTGCTCTACACCTCCGTCTGCCGCGACCTCGGCGACGGGCCTCCAAAATCCTCGCCGCCGCGCTGGGCGCATGCGCAGGAGCAGGGGACCGCCACCGTCACGCCGGCCACGAGGGTCGTCGACGCCGAGCAGGGGACCGGCCGCCCGGGGAGGCAAGAAGAGGAAGTGGTTGCTCCAAGAGAGGAGAAGCAGACCAAGGACGAAGCGGCTTCGCGCAGCGGCCATGGCGGCGGCTCGGTAGAGCAGCAGCAAAACCAGCGAAGGATCGTGATGCCCACAAGCCAACAGAAGGAGACGCCATCGTCGCCGCCCCAGCGGCAGCAGCAGGACCTGGGCGAGCTGCTCCGGCGAGCGGCGACGCCGGACAAGACGGTGCTGATGACGGCGATCAACGAGGCGTGGGCGGCTCCGGGGTCGTTCCTGGACCTGTTCCTGGAGAGCTTCCGGCACGGCGAGGGCACGGAGCACCTTGTGCGGCACCTGCTGGTGGTGGCCATGGACGGGAGGGCGTTCGAGCGGTGCAACGCCGTCCACCAATTCTGCTACTGGTTCAGGGTCGACGGGATGGACTTCGCCGCCGAGCAGTCGTACATGAAGGGCGACTACCTGGAGATGATGTGGAGGAGGAACAGGTTCCAGCAGACCATCCTCGAGCTCGGCTTCAGCTTCCTCTTCACGGACGTGGACATCCTGTGGTTTCGGAGCCCCTTCCCGCACCTATCCCCGGATGCACAGGT-GGTGATGTCCTCCGACTTCTTCGTCGGCGACCCAACCTCACCAGGGAACTACCCCAACGGCGGCCTCCTGTACGTCAGATCCAGCGCCAGCACCGTCAGGTTCTACGAGCACTGGCAGTCGTCGCGGGCGCGGTTCCCGGGGAAGCACGAGCAGTTCGTGTTCGACCGGATCGTCAAGGAAGGCGTGCCGCCGCACGTCGGCGCCACCGTGCGGTTCCTCGACACGGGCCACTTCGGCGGGTTCTGCCAGCACGGCAAGGACCTCGGCAGGGTTGTCACCATGCACGCCAACTGCTGCGTTGGGCTGCACAACAAGCTCTTCGATCTGAGGAATGTGCTCGACGATTGGAAGACGTATAAGGAAAGGGTTGCTGCCGGGAACATGGACTACTTCTCATGGAGGGTGCCAGGGAGGTGCATACATTGATAGGTGTGGGTGTTTTCTCAGGGCTTGTGCGGTTAATCCCTCCCTCCTCTAAGAAAAAATTCAGCGGATTTAATTTCATACCTTATCTACCCCGATCATTTTCTTAAGAGATCAACCGAATAAGCCCTAAATGAATTTGAGTTGGGACATGATGAGAGGGGGGTGTACCTGCATGTAAAGTGCTATTGAATTCAATTCTTTCTTATTAGTGGTAGCTTGTACATGATGCATGAGAAATGTACTCAACTAGTGTGTCTAAGATGCATATGAGACATTCCCTATTTATTGTATATTCATTTTTATCCTCTCAAATAATTAATGCATTAGTT]

[+] EMBL AK065831             [CGATCGCTCGCTCGCTCGCACTTCAGTTCTGGCGGCGCGCGCGGTGGCAGGGCCGGCCATGACGAAGTCGGCCACCTCGCTCCTGCTCGGCGCGGCCCTCGCCACGGTCTTCTTCCTGCTCTACACCTCCGTCTGCCGCGACCTCGGCGACGGGCCTCCAAAATCCTCGCCGCCGCGCTGGGCGCATGCGCAGGAGCAGGGGACCGCCACCGTCACGCCGGCCACGAGGGTCGTCGACGCCGAGCAGGGGACCGGCCGCCCGGGGAGGCAAGAAGAGGAAGTGGTTGCTCCAAGAGAGGAGAAGCAGACCAAGGACGAAGCGGCTTCGCGCAGCGGCCATGGCGGCGGCTCGGTAGAGCAGCAGCAAAACCAGCGAAGGATCGTGATGCCCACAAGCCAACAGAAGGAGACGCCATCGTCGCCGCCCCAGCGGCAGCAGCAGGACCTGGGCGAGCTGCTCCGGCGAGCGGCGACGCCGGACAAGACGGTGCTGATGACGGCGATCAACGAGGCGTGGGCGGCTCCGGGGTCGTTCCTGGACCTGTTCCTGGAGAGCTTCCGGCACGGCGAGGGCACGGAGCACCTTGTGCGGCACCTGCTGGTGGTGGCCATGGACGGGAGGGCGTTCGAGCGGTGCAACGCCGTCCACCAATTCTGCTACTGGTTCAGGGTCGACGGGATGGACTTCGCCGCCGAGCAGTCGTACATGAAGGGCGACTACCTGGAGATGATGTGGAGGAGGAACAGGTTCCAGCAGACCATCCTCGAGCTCGGCTTCAGCTTCCTCTTCACGGACGTGGACATCCTGTGGTTTCGGAGCCCCTTCCCGCACCTATCCCCGGATGCACAGGT GGTGATGTCCTCCGACTTCTTCGTCGGCGACCCAACCTCACCAGGGAACTACCCCAACGGCGGCCTCCTGTACGTCAGATCCAGCGCCAGCACCGTCAGGTTCTACGAGCACTGGCAGTCGTCGCGGGCGCGGTTCCCGGGGAAGCACGAGCAGTTCGTGTTCGACCGGATCGTCAAGGAAGGCGTGCCGCCGCACGTCGGCGCCACCGTGCGGTTCCTCGACACGGGCCACTTCGGCGGGTTCTGCCAGCACGGCAAGGACCTCGGCAGGGTTGTCACCATGCACGCCAACTGCTGCGTTGGGCTGCACAACAAGCTCTTCGATCTGAGGAATGTGCTCGACGATTGGAAGACGTATAAGGAAAGGGTTGCTGCCGGGAACATGGACTACTTCTCATGGAGGGTGCCAGGGAGGTGCATACATTGATAGGTGTGGGTGTTTTCTCAGGGCTTGTGCGGTTAATCCCTCCCTCCTCTAAGAAAAAATTCAGCGGATTTAATTTCATACCTTATCTACCCCGATCATTTTCTTAAGAGATCAACCGAATAAGCCCTAAATGAATTTGAGTTGGGACATGATGAGAGGGGGGTGTTCCTGCATGTAAAGTGCTATTGAATTCAATTCTTTCTTATTAGTGGTAGCTTGTACATGATGCATGAGAAATGTACTCAACTAGTGTGTCTAAGATGCATATGAGAC                                                        ]
[+] EMBL CB665225             [                                                                                    GCTCGGCGCGGCCCTCGCCACGGTCTTCTTCCTGCTCTACACCTCCGTCTGCCGCGACCTCGGCGACGGGCCTCCAAAATCCTCGCCGCCGCGCTGGGCGCATGCGCAGGAGCAGGGGACCGCCACCGTCACGCCGGCCACGAGGGTCGTCGACGCCGAGCAGGGGACCGGCCGCCCGGGGAGGCAAGAAGAGGAAGTGGTTGCTCCAAGAGAGGAGAAGCAGACCAAGGACGAAGCGGCTTCGCGCAGCGGCCATGGCGGCGGCTCGGTAGAGCAGCAGCAAAACCAGCGAAGGATCGTGATGCCCACAAGCCAACAGAAGGAGACGCCATCGTCGCCGCCCCAGCGGCAGCAGCAGGACCTGGGCGAGCTGCTCCGGCGAGCGGCGACGCCGGACAAGACGGTGCTGATGACGGCGATCAACGAGGCGTGGGCGGCTCCGGGGTCGTTCCTGGACCTGTTCCTGGAGAGCTTCCGGCACGGCGAGGGCACGGAGCACCTTGTGCGGCACCTGCTGGTGGTGGCCATGGACGGGAGGGCGTTCGAGCGGTGCAACGCCGTCCACCAATTCTGCTACTGGTTCAGGGTCGACGGGATGGACTTCGCCGCCGAGCAGTCGTACATGAAGGGCGACTACCTGGAGATGATGTGGAGGAGGAACAGGTTCCAGCAGACCATCCTCGAGCTCGGCTTCAGCTTCCTCTTCACGGACGTGGACATCCTGTGGTTTCGGAGCCCCTTCCCGCACCTATCCCCGGATGCACAGGTGGGTGATGTCCTCCGACTTCTTCGTCGGCGACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB665226             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCCTCCTGTACGTCAGATCCAGCGCCAGCACCGTCAGGTTCTACGAGCACTGGCAGTCGTCGCGGGCGCGGTTCCCGGGGAAGCACGAGCAGTTCGTGTTCGACCGGATCGTCAAGGAAGGCGTGCCGCCGCACGTCGGCGCCACCGTGCGGTTCCTCGACACGGGCCACTTCGGCGGGTTTTGCCAGCACGGCAAGGACCTCGGCAGGGTTGTCACCATGCACGCCAACTGCTGCGTTGGGCTGCACAACAAGCTCTTCGATCTGAGGAATGTGCTCGACGATTGGAAGACGTATAAGGAAAGGGTTGCTGCCGGGAACATGGACTACTTTTCATGGAGGGTGCCAGGGAGGTGCATACATTGATAGGTGTGGGTGTTTTCTCAGGGCTTGTGCGGTTAATCCCTCCCTCCTCTAAGAAAAAATTCAGCGGATTTAATTTCATACCTTATCTACCCCGATCATTTTCTTAAGAGATCAACCGAATAAGCCCTAAATGAATTTGAGTTGGGACATGATGAGAGGGGGGTGTACCTGCATGTAAAGTGCTATTGAATTCAATTCTTTTTTATTAGTGGTAGCTTGTACATGATGCATGAGAAATGTACTCAACTAGTGTGTTTAAGATGCATATGAGACATTCCCTATTTATTGTATATTCATTTTTATCCTCTCAAATAATTAATGCATTAGTT]
[+] EMBL CB096483             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGGGGGTGTACCTGCATGTAAAGTGCTATTGAATT  ATTCTTTCTTATTAGTGGTAGCTTGTACATGATGCATGAGAAATGTACTCAACTAGTGTGTCTAAGATGCATATGAGACATTCCCTATTTA                                            ]


>consensus_9709#0 CGATCGCTCGCTCGCTCGCACTTCAGTTCTGGCGGCGCGCGCGGTGGCAGGGCCGGCCAT GACGAAGTCGGCCACCTCGCTCCTGCTCGGCGCGGCCCTCGCCACGGTCTTCTTCCTGCT CTACACCTCCGTCTGCCGCGACCTCGGCGACGGGCCTCCAAAATCCTCGCCGCCGCGCTG GGCGCATGCGCAGGAGCAGGGGACCGCCACCGTCACGCCGGCCACGAGGGTCGTCGACGC CGAGCAGGGGACCGGCCGCCCGGGGAGGCAAGAAGAGGAAGTGGTTGCTCCAAGAGAGGA GAAGCAGACCAAGGACGAAGCGGCTTCGCGCAGCGGCCATGGCGGCGGCTCGGTAGAGCA GCAGCAAAACCAGCGAAGGATCGTGATGCCCACAAGCCAACAGAAGGAGACGCCATCGTC GCCGCCCCAGCGGCAGCAGCAGGACCTGGGCGAGCTGCTCCGGCGAGCGGCGACGCCGGA CAAGACGGTGCTGATGACGGCGATCAACGAGGCGTGGGCGGCTCCGGGGTCGTTCCTGGA CCTGTTCCTGGAGAGCTTCCGGCACGGCGAGGGCACGGAGCACCTTGTGCGGCACCTGCT GGTGGTGGCCATGGACGGGAGGGCGTTCGAGCGGTGCAACGCCGTCCACCAATTCTGCTA CTGGTTCAGGGTCGACGGGATGGACTTCGCCGCCGAGCAGTCGTACATGAAGGGCGACTA CCTGGAGATGATGTGGAGGAGGAACAGGTTCCAGCAGACCATCCTCGAGCTCGGCTTCAG CTTCCTCTTCACGGACGTGGACATCCTGTGGTTTCGGAGCCCCTTCCCGCACCTATCCCC GGATGCACAGGTGGTGATGTCCTCCGACTTCTTCGTCGGCGACCCAACCTCACCAGGGAA CTACCCCAACGGCGGCCTCCTGTACGTCAGATCCAGCGCCAGCACCGTCAGGTTCTACGA GCACTGGCAGTCGTCGCGGGCGCGGTTCCCGGGGAAGCACGAGCAGTTCGTGTTCGACCG GATCGTCAAGGAAGGCGTGCCGCCGCACGTCGGCGCCACCGTGCGGTTCCTCGACACGGG CCACTTCGGCGGGTTCTGCCAGCACGGCAAGGACCTCGGCAGGGTTGTCACCATGCACGC CAACTGCTGCGTTGGGCTGCACAACAAGCTCTTCGATCTGAGGAATGTGCTCGACGATTG GAAGACGTATAAGGAAAGGGTTGCTGCCGGGAACATGGACTACTTCTCATGGAGGGTGCC AGGGAGGTGCATACATTGATAGGTGTGGGTGTTTTCTCAGGGCTTGTGCGGTTAATCCCT CCCTCCTCTAAGAAAAAATTCAGCGGATTTAATTTCATACCTTATCTACCCCGATCATTT TCTTAAGAGATCAACCGAATAAGCCCTAAATGAATTTGAGTTGGGACATGATGAGAGGGG GGTGTACCTGCATGTAAAGTGCTATTGAATTCAATTCTTTCTTATTAGTGGTAGCTTGTA CATGATGCATGAGAAATGTACTCAACTAGTGTGTCTAAGATGCATATGAGACATTCCCTA TTTATTGTATATTCATTTTTATCCTCTCAAATAATTAATGCATTAGTT



consensusID : consensus_9709#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 469
fasta sequence
                              [CCTTTCCTTGAATAACGTTTAATTGGGAAGCAGAAGGAGACGCCATCGTCGCCGCCCCAGCGGCAGCAGCAGGACCTGGGCGAGCTGCTCCGGCGAGCGGCGACGCCGGACAAGACGGTGCTGATGACGGCGATCAACGAGGCGTGGGCGGCTCCGGGGTCGTTCCTGGACCTGTTCCTGGAGAGCTTCCGGCACGGCGAGGGCACGGAGCACCTTGTGCGGCACCTGCTGGTGGTGGCCATGGACGGGAGGGCGTTCGAGCGGTGCAACGCCGTCCACCAATTCTGCTACTGGTTCAGGGTCGACGGGATGGACTTCGCCGCCGAGCAGTCGTACATGAAGGGCGACTACCTGGAGATGATGTGGAGGAGGAACAGGTTCCAGCAGACCATCCTCGAGCTCGGCTTCAGCTTCCTCTTCACGGACGTGGACATCCTGTGGTTTCGGAGCCCCTTCCCGCACCTATCCC]

[+] EMBL CF296759             [CCTTTCCTTGAATAACGTTTAATTGGGAAGCAGAAGGAGACGCCATCGTCGCCGCCCCAGCGGCAGCAGCAGGACCTGGGCGAGCTGCTCCGGCGAGCGGCGACGCCGGACAAGACGGTGCTGATGACGGCGATCAACGAGGCGTGGGCGGCTCCGGGGTCGTTCCTGGACCTGTTCCTGGAGAGCTTCCGGCACGGCGAGGGCACGGAGCACCTTGTGCGGCACCTGCTGGTGGTGGCCATGGACGGGAGGGCGTTCGAGCGGTGCAACGCCGTCCACCAATTCTGCTACTGGTTCAGGGTCGACGGGATGGACTTCGCCGCCGAGCAGTCGTACATGAAGGGCGACTACCTGGAGATGATGTGGAGGAGGAACAGGTTCCAGCAGACCATCCTCGAGCTCGGCTTCAGCTTCCTCTTCACGGACGTGGACATCCTGTGGTTTCGGAGCCCCTTCCCGCACCTATCCC]


>consensus_9709#1 CCTTTCCTTGAATAACGTTTAATTGGGAAGCAGAAGGAGACGCCATCGTCGCCGCCCCAG CGGCAGCAGCAGGACCTGGGCGAGCTGCTCCGGCGAGCGGCGACGCCGGACAAGACGGTG CTGATGACGGCGATCAACGAGGCGTGGGCGGCTCCGGGGTCGTTCCTGGACCTGTTCCTG GAGAGCTTCCGGCACGGCGAGGGCACGGAGCACCTTGTGCGGCACCTGCTGGTGGTGGCC ATGGACGGGAGGGCGTTCGAGCGGTGCAACGCCGTCCACCAATTCTGCTACTGGTTCAGG GTCGACGGGATGGACTTCGCCGCCGAGCAGTCGTACATGAAGGGCGACTACCTGGAGATG ATGTGGAGGAGGAACAGGTTCCAGCAGACCATCCTCGAGCTCGGCTTCAGCTTCCTCTTC ACGGACGTGGACATCCTGTGGTTTCGGAGCCCCTTCCCGCACCTATCCC



consensusID : consensus_9709#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 297
fasta sequence
                              [TCCGCGACCTCGCGACGGCCCTCCAAAAATCCTCCCGCCCGCGCTGGGCCATGCCAGGACAGGGGACCGCCACCGTCACGCCGCCACGAGGGTCGTCGACGCCGACAGGGGACCGCCCCCCCGGGGAGCAAGAAGAGGAAGTGTTGCTCCAAGAGAGGAGAACCAGACCAAGGACGAACGCTTCGCCACAGCCCATGCGCGCTCGTAGACCACCCACCAAAACCAGCGAAGGATCTGATCCCCACAACCCAACAGTCCTTTTAGTTCCCTTTCGTCTCCTTGCTTTCAAAAAAGAAA]

[+] EMBL BI796377             [TCCGCGACCTCGCGACGGCCCTCCAAAAATCCTCCCGCCCGCGCTGGGCCATGCCAGGACAGGGGACCGCCACCGTCACGCCGCCACGAGGGTCGTCGACGCCGACAGGGGACCGCCCCCCCGGGGAGCAAGAAGAGGAAGTGTTGCTCCAAGAGAGGAGAACCAGACCAAGGACGAACGCTTCGCCACAGCCCATGCGCGCTCGTAGACCACCCACCAAAACCAGCGAAGGATCTGATCCCCACAACCCAACAGTCCTTTTAGTTCCCTTTCGTCTCCTTGCTTTCAAAAAAGAAA]


>consensus_9709#2 TCCGCGACCTCGCGACGGCCCTCCAAAAATCCTCCCGCCCGCGCTGGGCCATGCCAGGAC AGGGGACCGCCACCGTCACGCCGCCACGAGGGTCGTCGACGCCGACAGGGGACCGCCCCC CCGGGGAGCAAGAAGAGGAAGTGTTGCTCCAAGAGAGGAGAACCAGACCAAGGACGAACG CTTCGCCACAGCCCATGCGCGCTCGTAGACCACCCACCAAAACCAGCGAAGGATCTGATC CCCACAACCCAACAGTCCTTTTAGTTCCCTTTCGTCTCCTTGCTTTCAAAAAAGAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9709#0      CGATCGCTCGCTCGCTCGCACTTCAGTTCTGGCGGCGCGCGCGGTGGCAGGGCCGGCCAT 60
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      GACGAAGTCGGCCACCTCGCTCCTGCTCGGCGCGGCCCTCGCCACGGTCTTCTTCCTGCT 120
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      CTACACCTCCGTCTGCCGCGACCTCGGCGACGGGCCTCCAAAATCCTCGCCGCCGCGCTG 180
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      GGCGCATGCGCAGGAGCAGGGGACCGCCACCGTCACGCCGGCCACGAGGGTCGTCGACGC 240
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      CGAGCAGGGGACCGGCCGCCCGGGGAGGCAAGAAGAGGAAGTGGTTGCTCCAAGAGAGGA 300
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      GAAGCAGACCAAGGACGAAGCGGCTTCGCGCAGCGGCCATGGCGGCGGCTCGGTAGAGCA 360
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      GCAGCAAAACCAGCGAAGGATCGTGATGCCCACAAGCCAACAGAAGGAGACGCCATCGTC 420
consensus_9709#1      --------CCTTTCCTTGAATAACGTT--TAATTGGGAAGCAGAAGGAGACGCCATCGTC 50
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      GCCGCCCCAGCGGCAGCAGCAGGACCTGGGCGAGCTGCTCCGGCGAGCGGCGACGCCGGA 480
consensus_9709#1      GCCGCCCCAGCGGCAGCAGCAGGACCTGGGCGAGCTGCTCCGGCGAGCGGCGACGCCGGA 110
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      CAAGACGGTGCTGATGACGGCGATCAACGAGGCGTGGGCGGCTCCGGGGTCGTTCCTGGA 540
consensus_9709#1      CAAGACGGTGCTGATGACGGCGATCAACGAGGCGTGGGCGGCTCCGGGGTCGTTCCTGGA 170
consensus_9709#2      ----------TCCGCGACCTCG--CGACGGCCCTCCAAAAATCCTCCCGCCCGCGCTGGG 48
                                     ***  **  * ***   *          *    * *    **** 

consensus_9709#0      CCTGTTCCTGGAGAGCTTCCGGCACGGCGAGGGCACGGAGCACCTTGTGCGGCACCTGCT 600
consensus_9709#1      CCTGTTCCTGGAGAGCTTCCGGCACGGCGAGGGCACGGAGCACCTTGTGCGGCACCTGCT 230
consensus_9709#2      CCATGCCAGGACAGGGGACCGCCACCGTCACGCCGCCACGAGGGTCGT-CGACGCCGACA 107
                      **    *  *    *   *** *** *  * * * *   *    * ** ** * **  * 

consensus_9709#0      GGTGGTGGCCATGGACGGGAGGGCGTTCGAGCGGTGCAACGCCGTCCACCAATTCTGCTA 660
consensus_9709#1      GGTGGTGGCCATGGACGGGAGGGCGTTCGAGCGGTGCAACGCCGTCCACCAATTCTGCTA 290
consensus_9709#2      GGGGACCGCCCCC--CCGGGGAGCA---AGAAGAGGAAGTGTTGCTCCAAGAGAGGAGAA 162
                      ** *   ***     * ** * **        *  * *  *  *  *    *       *

consensus_9709#0      CTGGTTCAGGGTCGACGGGATGGACTTCGCCGCCGAGCAGTCGTACATGAAGGGCGACTA 720
consensus_9709#1      CTGGTTCAGGGTCGACGGGATGGACTTCGCCGCCGAGCAGTCGTACATGAAGGGCGACTA 350
consensus_9709#2      CCAGACCAAGGACGAACGCTTCGCCACAGCCCATGCGCGCTCGTAGACCACCCACCAAAA 222
                      *  *  ** ** ***  *  * * *   ***   * **  ***** *  *    * *  *

consensus_9709#0      CCTGGAGATGATGTGGAGGAGGAACAGGTTCCAGCAGACCATCCTCGAGCTCGGCTTCAG 780
consensus_9709#1      CCTGGAGATGATGTGGAGGAGGAACAGGTTCCAGCAGACCATCCTCGAGCTCGGCTTCAG 410
consensus_9709#2      CCAGCGAAGGATCTG----ATCCCCACAACCCAACAGTC---CTTTTAGTTCCCTTTCGT 275
                      ** *   * *** **    *    **    *** *** *   * *  ** **   ***  

consensus_9709#0      CTTCCTCTTCACGGACGTGGACATCCTGTGGTTTCGGAGCCCCTTCCCGCACCTATCCCC 840
consensus_9709#1      CTTCCTCTTCACGGACGTGGACATCCTGTGGTTTCGGAGCCCCTTCCCGCACCTATCCC- 469
consensus_9709#2      CTCCTTGCTTTCAAAAAAGAAA-------------------------------------- 297
                      ** * *  *  *  *   * *                                       

consensus_9709#0      GGATGCACAGGTGGTGATGTCCTCCGACTTCTTCGTCGGCGACCCAACCTCACCAGGGAA 900
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      CTACCCCAACGGCGGCCTCCTGTACGTCAGATCCAGCGCCAGCACCGTCAGGTTCTACGA 960
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      GCACTGGCAGTCGTCGCGGGCGCGGTTCCCGGGGAAGCACGAGCAGTTCGTGTTCGACCG 1020
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      GATCGTCAAGGAAGGCGTGCCGCCGCACGTCGGCGCCACCGTGCGGTTCCTCGACACGGG 1080
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      CCACTTCGGCGGGTTCTGCCAGCACGGCAAGGACCTCGGCAGGGTTGTCACCATGCACGC 1140
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      CAACTGCTGCGTTGGGCTGCACAACAAGCTCTTCGATCTGAGGAATGTGCTCGACGATTG 1200
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      GAAGACGTATAAGGAAAGGGTTGCTGCCGGGAACATGGACTACTTCTCATGGAGGGTGCC 1260
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      AGGGAGGTGCATACATTGATAGGTGTGGGTGTTTTCTCAGGGCTTGTGCGGTTAATCCCT 1320
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      CCCTCCTCTAAGAAAAAATTCAGCGGATTTAATTTCATACCTTATCTACCCCGATCATTT 1380
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      TCTTAAGAGATCAACCGAATAAGCCCTAAATGAATTTGAGTTGGGACATGATGAGAGGGG 1440
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      GGTGTACCTGCATGTAAAGTGCTATTGAATTCAATTCTTTCTTATTAGTGGTAGCTTGTA 1500
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      CATGATGCATGAGAAATGTACTCAACTAGTGTGTCTAAGATGCATATGAGACATTCCCTA 1560
consensus_9709#1      ------------------------------------------------------------
consensus_9709#2      ------------------------------------------------------------
                                                                                  

consensus_9709#0      TTTATTGTATATTCATTTTTATCCTCTCAAATAATTAATGCATTAGTT 1608
consensus_9709#1      ------------------------------------------------
consensus_9709#2      ------------------------------------------------
                                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)