These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9738#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1872 fasta sequence [CATTGCCGCCGCCGCCTGCGACGGCCGCGAGCTCATCCCGAGACGACGTCTCTAGCTAGCATCGAGCGTTCTTTCTCTCCTCGGGCTCTCGTTGTTGAGATAAGGCAAATCAAGAGAGCAAAATTTTGGTGGTACATGTGGTGATTCTATGTCGACAAGGCGTCATCTTGCAGTATTTACCACTGCAAGCCTCCCATGGATGACAGGAACGGCCATCAACCCGTTGTTCCGGGCGGCCTATCTTGCAAAGGATGGGGATAGGGAGGTCACCTTGGTAATCCCCTGGCTTTCTCTGAGGGACCAAGAATTGGTTTACCCGAATAAGATTGTGTTCGGTTCGCCTTTGGAGCATGAGGCCTATGTTCGTCGCTGGATTGAGGAGAGGATCAGTTTCAGACCTTCCTTCAGCATCAAATTCTACCCTGCGAAGTTCTCTAAAGAACTGAGAAGTATTCTACCTGTTGGAGATATCACAGAATGTATTCCAGATGAAGTGGCTGATGTTGCTGTTCTGGAAGAACCTGAACATCTCAATTGGTACCACCATGGGCGCAAATGGAAAAATAAGTTCAGGCGAGTGATAGGTGTGGTTCACACAAATTATATAGCATATGTGAAAAGAGAAAAGAATGGACAAGCGATTGCCTGTTTCATGAAGTACATGAACACCTGGGTTACCCGGATTTATTGCCACAAGATTATCAGATTGTCAGGTGCCACCCAAGATCTTCCCAGATCTGTTGTGTGCAATGTCCATGGCGTGAATCCAAAATTTCTTGAGGTAGGTAAACTAAAGTTGAAGCAGCTGCGGAATGGGGAAATAGCCTTCACAAAAGGGGCATACTATATTGGGAAGATGGTGTGGAGTAAAGGATACAGGGAACTTCTTGACCTGCTGTCCAAATATCAGAGCAAGTTGGTGGGTTTGGAAGTAGATTTATATGGTAGCGGAGAAGATTCCGACGAAGTTCGAAAATCTGCAGAACTTCTGAGTTTGGCCGTGAAGGTTCACCCAGGACGTGATCATGCAGATCCCCTGTTCCATGACTATAAAGTATTCATCAACCCTAGCACAACAGATGTGGTCTGTACAACAACTGCCGAGGCCCTTGCAATGGGAAAGATTGTCATATGTGCCAATCACCCTTCAAACGAGTTCTTCAAGCAGTTCCCTAATTGCCGCACCTATGACAGTGGCGAGGAATTTGTACAACTAACGCTGGATGCTCTAGCAGAGCAGCCTGCTCCACTGACTGACATGCAGAGTCATGACCTATCTTGGGAGGCCGCGACCGAGAGATTCATGGAAGCCGCGGAGCTGAACCTTCCTATCTCAGCAGAGCCAAGAATCCATCAAACATCCAAGGTCTCTCTCCCTGCTTTTATGAGGACTCGTAAACTGAAACAGAG-CTTGGAGGATGCATCA-GTTTACCTGCATCAAGCACTCTCAGGACTTGAAGTCACCCGTCGCGCCTTCGGTGCTGTTCCGAAGACGCTGCAACCTGATGAGCAGCTGTGCAACGATCTAGGTTTGGCTCCCGCCAAGAAAAAGAGGTTGAAATTGAAGCTGATGACCTGATGATGT-AACTTCTCTTGAGCCCCTGATT-GCATCGTGTCA-TTTCCTTTTCTGCACATTATATCCGAGGAGTATGTATGAA-TCCTAATGGAGGATCAGTGCATTTTCCATTAGTATGTTTACTTAGTT-CAGGATGTAAATTACACTACAAATGTAATTGGACTATTGGAGACTTTGGAGTACTAGTACTACTAACCTAGTGGCTTTATTGAAAATTTAAAACTGTGATGTGATTCTGCCCATCAGTGTCTTCTTAATGTAACAGTACTTCTGTACTTATCATCCTAAAAAAAAAA] [+] EMBL AK067931 [CATTGCCGCCGCCGCCTGCGACGGCCGCGAGCTCATCCCGAGACGACGTCTCTAGCTAGCATCGAGCGTTCTTTCTCTCCTCGGGCTCTCGTTGTTGAGATAAGGCAAATCAAGAGAGCAAAATTTTGGTGGTACATGTGGTGATTCTATGTCGACAAGGCGTCATCTTGCAGTATTTACCACTGCAAGCCTCCCATGGATGACAGGAACGGCCATCAACCCGTTGTTCCGGGCGGCCTATCTTGCAAAGGATGGGGATAGGGAGGTCACCTTGGTAATCCCCTGGCTTTCTCTGAGGGACCAAGAATTGGTTTACCCGAATAAGATTGTGTTCGGTTCGCCTTTGGAGCATGAGGCCTATGTTCGTCGCTGGATTGAGGAGAGGATCAGTTTCAGACCTTCCTTCAGCATCAAATTCTACCCTGCGAAGTTCTCTAAAGAACTGAGAAGTATTCTACCTGTTGGAGATATCACAGAATGTATTCCAGATGAAGTGGCTGATGTTGCTGTTCTGGAAGAACCTGAACATCTCAATTGGTACCACCATGGGCGCAAATGGAAAAATAAGTTCAGGCGAGTGATAGGTGTGGTTCACACAAATTATATAGCATATGTGAAAAGAGAAAAGAATGGACAAGCGATTGCCTGTTTCATGAAGTACATGAACACCTGGGTTACCCGGATTTATTGCCACAAGATTATCAGATTGTCAGGTGCCACCCAAGATCTTCCCAGATCTGTTGTGTGCAATGTCCATGGCGTGAATCCAAAATTTCTTGAGGTAGGTAAACTAAAGTTGAAGCAGCTGCGGAATGGGGAAATAGCCTTCACAAAAGGGGCATACTATATTGGGAAGATGGTGTGGAGTAAAGGATACAGGGAACTTCTTGACCTGCTGTCCAAATATCAGAGCAAGTTGGTGGGTTTGGAAGTAGATTTATATGGTAGCGGAGAAGATTCCGACGAAGTTCGAAAATCTGCAGAACTTCTGAGTTTGGCCGTGAAGGTTCACCCAGGACGTGATCATGCAGATCCCCTGTTCCATGACTATAAAGTATTCATCAACCCTAGCACAACAGATGTGGTCTGTACAACAACTGCCGAGGCCCTTGCAATGGGAAAGATTGTCATATGTGCCAATCACCCTTCAAACGAGTTCTTCAAGCAGTTCCCTAATTGCCGCACCTATGACAGTGGCGAGGAATTTGT ACTAACGCTGGATGCTCTAGCAGAGCAGCCTGCTCCACTGACTGACATGCAGAGTCATGACCTATCTTGGGAGGCCGCGACCGAGAGATTCATGGAAGCCGCGGAGCTGAACCTTCCTATCTCAGCAGAGCCAAGAATCCATCAAACATCCAAGGTCTCTCTCCCTGCTTTTATGAGGACTCGTAAACTGAAACAGAG CTTGGAGGATGCATCA GTTTACCTGCATCAAGCACTCTCAGGACTTGAAGTCACCCGTCGCGCCTTCGGTGCTGTTCCGAAGACGCTGCAACCTGATGAGCAGCTGTGCAACGATCTAGGTTTGGCTCCCGCCAAGAAAAAGAGGTTGAAATTGAAGCTGATGACCTGATGATGT AACTTCTCTTGAGCCCCTGATT GCATCGTGTCA TTTCCTTTTCTGCACATTATATCCGAGGAGTATGTATGAA TCCTAATGGAGGATCAGTGCATTTTCCATTAGTATGTTTACTTAGTT CAGGATGTAAATTACACTACAAATGTAATTGGACTATTGGAGACTTTGGAGTACTAGTACTACTAACCTAGTGGCTTTATTGAAAATTTAAAACTGTGATG ] [+] EMBL CB642366 [ gaGAAGGTT ACCCAGGAAGTGATCATGCAGATCCCCTGTTCCATGACTATAAAGTATTCATCAACCCCAGCACAACAGATGTGGTCTGTACAACAACTGCCGAGGCCCTTGCAATGGGAAAGATTGTCATATGTGCCAATCACCCTTCAAACGAGTTCTTCAAGCAGTTCCCTAATTGCCGCACCTATGACAGTGGCGAGGAATTTGTACAACTAACGCTGGATGCTCTAGCAGAGCAGCCTGCTCCACTGACTGACATGCAGAGTCATGACCTATCTTGGGAGGCCGCGACCGAGAGATTCATGGAAGCCGCGGAGCTGAACCTTCCTATCTCAGCAGAGCCAAGAATCCATCAAACATCCAAGGTCTCTCTCCCTGCTTTTATGAGGACTCGTAAACTGAAACAGAG CTTGGAGGATGCATCA GTTTACCTGCATCAAGCACTCTCAGGACTTGAAGTCACCCGTCGCGCCTTCGGTGCTGTTCCGAAGACGCTGCAACCTGATGAGCAGCTGTGCAACGATCTAGGTTTGGCTCCCGCCAAGAAAAAGAGGTTGAAATTGAAGCTGATGACCTGATGATGT AACTTCTCTTGAGCCCCTGATT GCATCGTGTCA TTTCCTTTTCTGCACATTATATCCGAGGAGTATGTATGAA TCCTAATGGAGGATCAGTGCATTTTCCATTAGTATGTTTACTTAGTT CAGGATGTAAATTACACTACAAATGTAATTGGACTATTGGAGACTTAGTAGTACTAGTACTCCTAACCTAGTGGCTTTATTGAAAATTT AAACTGTGATGT ] [-] EMBL CB642367 [ CCCTGTTCCATGACTATAAAGTATTCATCAACCCTAGCACAACAGATGTGGTCTGTACAACAACTGCCGAGGCCCTTGCAATGGGAAAGATTGTCATATGTGCCAATCACCCTTCAAACGAGTTCTTCAAGCAGTTCCCTAATTGCCGCACCTATGACAGTGGCGAGGAATTTGTACAACTAACGCTGGATGCTCTAGCAGAGCAGCCTGCTCCACTGACTGACATGCAGAGTCATGACCTATCTTGGGAGGCCGCGACCGAGAGATTCATGGAAGCCGCGGAGCTGAACCTTCCTATCTCAGCAGAGCCAAGAATCCATCAAACATCCAAGGTCTCTCTCCCTGCTTTTATGAGGACTCGTAAACTGAAACAGAG CTTGGAGGATGCATCA GTTTACCTGCATCAAGCACTCTCAGGACTTGAAGTCACCCGTCGCGCCTTCGGTGCTGTTCCGAAGACGCTGCAACCTGATGAGCAGCTGTGCAACGATCTAGGTTTGGCTCCCGCCAAGAAAAAGAGGTTGAAATTGAAGCTGATGACCTGATGATGT AACTTCTCTTGAGCCCCTGATT GCATCGTGTCA TTTCCTTTTCTGCACATTATATCCGAGGAGTATGTATGAA TCCTAATGGAGGATCAGTGCATTTTCCATTAGTATGTTTACTTAGTT CAGGATGTAAATTACACTACAAATGTAATTGGACTATTGGAGACTTAGTAGTACTAGTACTCCTAACCTAGTGGCTTTATTGAAAATTTAAAACTGTGATGTG ] [+] EMBL CA764568 [ AAGCC CGGAGCTGAACCTTCCTATCTCAGCAGAGCCAAGAATCCATCAAACATCCAAGGCCTCTCTCCCTGCTTTTATGAGGACTCGTAAACTGAAACAGAG CTTGGAGGATGCATCANGTTTACCTGCATCAAGCACTCTCAGGACTTGAAGTCACCCGTCGCGCCTTCGGTGCTGTTCCGAAGACGCTGCAACCTGATGAGCAGCTGTGCAACGATCTAGGTTTGGCTCCCGCCAAGAAAAAGAGGTTGAAATTGAAGCTGATGACCTGATGATGT AACTTCTCTTGAGCCCCTGATT GCATTGTGTCA TTTCCTTTTCTGCACATTACATCCGAGGAGTATGTATGAA TCCTAATGGAGGATCAGTGCATTTTCCATTAGTATGTTTACTTAGTT CAGGATGTAAATTACACTACAAATGTAATTGGACTATTGGAGACTTTGGAGTACTAGTACTACTAACCTAG ] [+] EMBL CF196744 [ CCATCAAACATCCAAGGTCTCTCTCCCTGCTTTTATGAGGACTCGTAAACTGAAACAGAG CTTGGAGGATGCATCA GTTTACCTGCATCAAGCACTCTCAGGACTTGAAGTCACCCGTCGCGCCTTCGGTGCTGTTCCGAAGACGCTGCAACCTGATGAGCAGCTGTGCAACGATCTAGGTTTGGCTCCCGCCAAGAAAAAGAGGTTGAAATTGAAGCTGATGACCTGATGATGT AACTTCTCTTGAGCCCCTGATT GCATCGTGTCA TTTCCTTTTCTGCACATTATATCCGAGGAGTATGTATGAA TCCTAATGGAGGATCAGTGCATTTTCCATTAGTATGTTTACTTAGTT CAGGATGTAAATTACACTACAAATGTAATTGGACTATTGGAGACTTTGGAGTACTAGTACTACTAACCTAGTGGCTTTATTGAAAATTTAAAACTGTGATGTGATTCTGCCCATCAGTGTCTTCTTAATGTAACAGTACTTCTGTACTTATCATCCTAAAAAAAA ] [+] EMBL BI804339 [ TGAACCAGAGCCTTGGAGGATGCATCA GTTTACCTGCATCAAGCACTCTCAGGACTTGAAGTCACCCGTCGCGCCTTCGGTGCTGTTCCGAAGACGCTGC ACCTGATGAGCAGCTGTGC ACGATCTAGGTTTGGCTCCCGCCAAGAAAAAGAGGTTGAAATTGAAGCTGATGACCTGATGATGTCAACTTCTCTTGAGCCCCTGATTCGCATTGTGTCACTTTCCTTTTCTGCACATTACATCCGAGGAGTATGTATGAACTCCTAATGGAGGATCAGTGCATTTTCCATTAGTATGTTTACTTAGTTCCAGGATGTAAATTAC CTAC AATGTAATTGGACTATTGGAGACTTTGGAGTACTAGTACTACTAACCTAGTGTCTTTATTGAAAATTTAAAACTGTGATGTGATTCTGCCCATCAGTGTCTTCTTAATGTAACAGTACTTCTGTACTTATCATCCTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||