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Oryza sativa
cluster # 9745 cluster # 9745       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9745#0 length = 1041 sequences # 6  

consensusID : consensus_9745#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1041
fasta sequence
                              [TGCAAACCTCTCCTACCTCACACTCCACCCTAGCTAGCCCACTACACCTCCTACACCCTCACCATCCAATAGCGCAGTGACAGTGCCAATGGCCTCTCACACCACCCTCATCCTCCTCCTCCCTCTCCTCGCCGCCGCGGCCGTCGCCGCCGCGGACGTCGCCCCTGCGCCGGCGCCACCTGCGGCGCAGACGATCAACCTCACGGGCATCCTCGAGAAGGGCGGGCAGTACAACACGCTGCTCCGCCTCCTCAACGCCACCCGCGTCGGCGAGCAGCTGGGCAGCCAGCTGAAGACCACCTACGACGGCCTCACCTTCTTCGCGCCGACGGACGCCGCCTTCGCCGCGCTGAGGCCGGGCACGCTCAACGGCCTGAGCGACCAGGAGCAGGTGCAGCTGGTGCTCTACCACGTCCTCCCGCGCTACTACACCCTCGCCACGTTCCAGACGGCCAGCAACCCGCTGCGCACGCAGGCCACGGGCCCCGCCGGCGTGTACACCGTCAACGTCACCACCACCACGGGGCAGAGCCTCGTCAACGTGTCCACCGGCGTCGCCGCCGTCCCCCTCGGCACCACGCTCTCCGCCGACTTCCCGCTCGCCGTCTACTCCGTCGACGGCGTGCTCCTGCCGGAGCAGATGTTCGGGAAGGCCAAGGCTCCCGCGCCGGCCGCCGCGCCCGCGTCCGCCGCCGGGAAGGGCGCCAATAAGGAGCACAAGAAGGGCGGCGCCATGCCCAAGAATGAGGTCGCGGCCACCGCGCCGACGGCCGGAGCTGGAGGAGAAGATTCAGATGACAGCGCCACCACCAATGCGGTGGCCGTTGCAGGCGCGGCCGGTGTGGTGTGGACTGCTGCTCTCGTGGGGATTGCCAATCTTGTCATCGCGTAGAAAGTGTGTGCTTGTCTTTTTCTCCTTCGCCGTTTTCTTTCGTTTTCGTCGTTGCATATGTTTCATTGCACGTGTCCTATTTTGTATGTATGCAAGAGTATTTATATATGTTGATGATGATTCACTCAGTGAAATTTACTGGCTTCTTT]

[+] EMBL AK061195             [TGCAAACCTCTCCTACCTCACACTCCACCCTAGCTAGCCCACTACACCTCCTACACCCTCACCATCCAATAGCGCAGTGACAGTGCCAATGGCCTCTCACACCACCCTCATCCTCCTCCTCCCTCTCCTCGCCGCCGCGGCCGTCGCCGCCGCGGACGTCGCCCCTGCGCCGGCGCCACCTGCGGCGCAGACGATCAACCTCACGGGCATCCTCGAGAAGGGCGGGCAGTACAACACGCTGCTCCGCCTCCTCAACGCCACCCGCGTCGGCGAGCAGCTGGGCAGCCAGCTGAAGACCACCTACGACGGCCTCACCTTCTTCGCGCCGACGGACGCCGCCTTCGCCGCGCTGAGGCCGGGCACGCTCAACGGCCTGAGCGACCAGGAGCAGGTGCAGCTGGTGCTCTACCACGTCCTCCCGCGCTACTACACCCTCGCCACGTTCCAGACGGCCAGCAACCCGCTGCGCACGCAGGCCACGGGCCCCGCCGGCGTGTACACCGTCAACGTCACCACCACCACGGGGCAGAGCCTCGTCAACGTGTCCACCGGCGTCGCCGCCGTCCCCCTCGGCACCACGCTCTCCGCCGACTTCCCGCTCGCCGTCTACTCCGTCGACGGCGTGCTCCTGCCGGAGCAGATGTTCGGGAAGGCCAAGGCTCCCGCGCCGGCCGCCGCGCCCGCGTCCGCCGCCGGGAAGGGCGCCAATAAGGAGCACAAGAAGGGCGGCGCCATGCCCAAGAATGAGGTCGCGGCCACCGCGCCGACGGCCGGAGCTGGAGGAGAAGATTCAGATGACAGCGCCACCACCAATGCGGTGGCCGTTGCAGGCGCGGCCGGTGTGGTGTGGACTGCTGCTCTCGTGGGGATTGCCAATCTTGTCATCGCGTAGAAAGTGTGTGCTTGTCTTTTTCTCCTTCGCCGTTTTCTTTCGTTTTCGTCGTTGCATATGTTTCATTGCACGTGTCCTATTTTGTATGTATGCAAGAGTATTTATATATGTTGATGATGAT                            ]
[+] EMBL AK104181             [TGCAAACCTCTCCTACCTCACACTCCACCCTAGCTAGCCCACTACACCTCCTACACCCTCACCATCCAATAGCGCAGTGACAGTGCCAATGGCCTCTCACACCACCCTCATCCTCCTCCTCCCTCTCCTCGCCGCCGCGGCCGTCGCCGCCGCGGACGTCGCCCCTGCGCCGGCGCCACCTGCGGCGCAGACGATCAACCTCACGGGCATCCTCGAGAAGGGCGGGCAGTACAACACGCTGCTCCGCCTCCTCAACGCCACCCGCGTCGGCGAGCAGCTGGGCAGCCAGCTGAAGACCACCTACGACGGCCTCACCTTCTTCGCGCCGACGGACGCCGCCTTCGCCGCGCTGAGGCCGGGCACGCTCAACGGCCTGAGCGACCAGGAGCAGGTGCAGCTGGTGCTCTACCACGTCCTCCCGCGCTACTACACCCTCGCCACGTTCCAGACGGCCAGCAACCCGCTGCGCACGCAGGCCACGGGCCCCGCCGGCGTGTACACCGTCAACGTCACCACCACCACGGGGCAGAGCCTCGTCAACGTGTCCACCGGCGTCGCCGCCGTCCCCCTCGGCACCACGCTCTCCGCCGACTTCCCGCTCGCCGTCTACTCCGTCGACGGCGTGCTCCTGCCGGAGCAGATGTTCGGGAAGGCCAAGGCTCCCGCGCCGGCCGCCGCGCCCGCGTCCGCCGCCGGGAAGGGCGCCAATAAGGAGCACAAGAAGGGCGGCGCCATGCCCAAGAATGAGGTCGCGGCCACCGCGCCGACGGCCGGAGCTGGAGGAGAAGATTCAGATGACAGCGCCACCACCAATGCGGTGGCCGTTGCAGGCGCGGCCGGTGTGGTGTGGACTGCTGCTCTCGTGGGGATTGCCAATCTTGTCATCGCGTAGAAAGTGTGTGCTTGTCTTTTTCTCCTTCGCCGTTTTCTTTCGTTTTCGTCGTTGCATATGTTTCATTGCACGTGTCCTATTTTGTATGTATGCAAGAGTATTTATATATGTTGATGA                                ]
[+] EMBL AK104655             [  CAAACCTCTCCTACCTCACACTCCACCCTAGCTAGCCCACTACACCTCCTACACCCTCACCATCCAATAGCGCAGTGACAGTGCCAATGGCCTCTCACACCACCCTCATCCTCCTCCTCCCTCTCCTCGCCGCCGCGGCCGTCGCCGCCGCGGACGTCGCCCCTGCGCCGGCGCCACCTGCGGCGCAGACGATCAACCTCACGGGCATCCTCGAGAAGGGCGGGCAGTACAACACGCTGCTCCGCCTCCTCAACGCCACCCGCGTCGGCGAGCAGCTGGGCAGCCAGCTGAAGACCACCTACGACGGCCTCACCTTCTTCGCGCCGACGGACGCCGCCTTCGCCGCGCTGAGGCCGGGCACGCTCAACGGCCTGAGCGACCAGGAGCAGGTGCAGCTGGTGCTCTACCACGTCCTCCCGCGCTACTACACCCTCGCCACGTTCCAGACGGCCAGCAACCCGCTGCGCACGCAGGCCACGGGCCCCGCCGGCGTGTACACCGTCAACGTCACCACCACCACGGGGCAGAGCCTCGTCAACGTGTCCACCGGCGTCGCCGCCGTCCCCCTCGGCACCACGCTCTCCGCCGACTTCCCGCTCGCCGTCTACTCCGTCGACGGCGTGCTCCTGCCGGAGCAGATGTTCGGGAAGGCCAAGGCTCCCGCGCCGGCCGCCGCGCCCGCGTCCGCCGCCGGGAAGGGCGCCAATAAGGAGCACAAGAAGGGCGGCGCCATGCCCAAGAATGAGGTCGCGGCCACCGCGCCGACGGCCGGAGCTGGAGGAGAAGATTCAGATGACAGCGCCACCACCAATGCGGTGGCCGTTGCAGGCGCGGCCGGTGTGGTGTGGACTGCTGCTCTCGTGGGGATTGCCAATCTTGTCATCGCGTAGAAAGTGTGTGCTTGTCTTTTTCTCCTTCGCCGTTTTCTTTCGTTTTCGTCGTTGCATATGTTTCATTGCACGTGTCCTATTTTGTATGTATGCAAGAGTATTTATATATGTTGATGATGATTCACTCAGTGAAA               ]
[+] EMBL AK104630             [      CCTCTCCTACCTCACACTCCACCCTAGCTAGCCCACTACACCTCCTACACCCTCACCATCCAATAGCGCAGTGACAGTGCCAATGGCCTCTCACACCACCCTCATCCTCCTCCTCCCTCTCCTCGCCGCCGCGGCCGTCGCCGCCGCGGACGTCGCCCCTGCGCCGGCGCCACCTGCGGCGCAGACGATCAACCTCACGGGCATCCTCGAGAAGGGCGGGCAGTACAACACGCTGCTCCGCCTCCTCAACGCCACCCGCGTCGGCGAGCAGCTGGGCAGCCAGCTGAAGACCACCTACGACGGCCTCACCTTCTTCGCGCCGACGGACGCCGCCTTCGCCGCGCTGAGGCCGGGCACGCTCAACGGCCTGAGCGACCAGGAGCAGGTGCAGCTGGTGCTCTACCACGTCCTCCCGCGCTACTACACCCTCGCCACGTTCCAGACGGCCAGCAACCCGCTGCGCACGCAGGCCACGGGCCCCGCCGGCGTGTACACCGTCAACGTCACCACCACCACGGGGCAGAGCCTCGTCAACGTGTCCACCGGCGTCGCCGCCGTCCCCCTCGGCACCACGCTCTCCGCCGACTTCCCGCTCGCCGTCTACTCCGTCGACGGCGTGCTCCTGCCGGAGCAGATGTTCGGGAAGGCCAAGGCTCCCGCGCCGGCCGCCGCGCCCGCGTCCGCCGCCGGGAAGGGCGCCAATAAGGAGCACAAGAAGGGCGGCGCCATGCCCAAGAATGAGGTCGCGGCCACCGCGCCGACGGCCGGAGCTGGAGGAGAAGATTCAGATGACAGCGCCACCACCAATGCGGTGGCCGTTGCAGGCGCGGCCGGTGTGGTGTGGACTGCTGCTCTCGTGGGGATTGCCAATCTTGTCATCGCGTAGAAAGTGTGTGCTTGTCTTTTTCTCCTTCGCCGTTTTCTTTCGTTTTCGTCGTTGCATATGTTTCATTGCACGTGTCCTATTTTGTATGTATGCAAGAGTATTTATATATGTTGATGATGATTCACTCAGTGAAA               ]
[+] EMBL AK061421             [                                                                        CGCAGTGACAGTGCCAATGGCCTCTCACACCACCCTCATCCTCCTCCTCCCTCTCCTCGCCGCCGCGGCCGTCGCCGCCGCGGACGTCGCCCCTGCGCCGGCGCCACCTGCGGCGCAGACGATCAACCTCACGGGCATCCTCGAGAAGGGCGGGCAGTACAACACGCTGCTCCGCCTCCTCAACGCCACCCGCGTCGGCGAGCAGCTGGGCAGCCAGCTGAAGACCACCTACGACGGCCTCACCTTCTTCGCGCCGACGGACGCCGCCTTCGCCGCGCTGAGGCCGGGCACGCTCAACGGCCTGAGCGACCAGGAGCAGGTGCAGCTGGTGCTCTACCACGTCCTCCCGCGCTACTACACCCTCGCCACGTTCCAGACGGCCAGCAACCCGCTGCGCACGCAGGCCACGGGCCCCGCCGGCGTGTACACCGTCAACGTCACCACCACCACGGGGCAGAGCCTCGTCAACGTGTCCACCGGCGTCGCCGCCGTCCCCCTCGGCACCACGCTCTCCGCCGACTTCCCGCTCGCCGTCTACTCCGTCGACGGCGTGCTCCTGCCGGAGCAGATGTTCGGGAAGGCCAAGGCTCCCGCGCCGGCCGCCGCGCCCGCGTCCGCCGCCGGGAAGGGCGCCAATAAGGAGCACAAGAAGGGCGGCGCCATGCCCAAGAATGAGGTCGCGGCCACCGCGCCGACGGCCGGAGCTGGAGGAGAAGATTCAGATGACAGCGCCACCACCAATGCGGTGGCCGTTGCAGGCGCGGCCGGTGTGGTGTGGACTGCTGCTCTCGTGGGGATTGCCAATCTTGTCATCGCGTAGAAAGTGTGTGCTTGTCTTTTTCTCCTTCGCCGTTTTCTTTCGTTTTCGTCGTTGCATATGTTTCATTGCACGTGTCCTATTTTGTATGTATGCAAGAGTATTTATATATGTTGATGATGATTCACTCAGTGAAATTTACTGGCTTCTTT]
[+] EMBL BI806114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGCCAATAAGGAGCACAAGAAGGGCGGCGCCATGCCCAAGAATGAGGTCGCGGCCACCGCGCCGACGGCCGGAGCTGGAGGAGAAGATTCAGATGACAGCGCCACCACCAATGCGGTGGCCGTTGCAGGCGC GCCGGTGTGGTGTGGACTGCTGCTCTCGTGGGGATTGCCAATCTTGTCATCGCGTAGAAAGTGTGTGCTTGTCTTTTTCTCCTTC CCGTTTTCTTTCGTTTTCGTCGTTGCATATGTTTCATTGCACGTGTCCTATTTTGTATGTATGCCAGAGTATTTATATATGTTGATGATGATTCACTCAGTGAAAaaaa           ]


>consensus_9745#0 TGCAAACCTCTCCTACCTCACACTCCACCCTAGCTAGCCCACTACACCTCCTACACCCTC ACCATCCAATAGCGCAGTGACAGTGCCAATGGCCTCTCACACCACCCTCATCCTCCTCCT CCCTCTCCTCGCCGCCGCGGCCGTCGCCGCCGCGGACGTCGCCCCTGCGCCGGCGCCACC TGCGGCGCAGACGATCAACCTCACGGGCATCCTCGAGAAGGGCGGGCAGTACAACACGCT GCTCCGCCTCCTCAACGCCACCCGCGTCGGCGAGCAGCTGGGCAGCCAGCTGAAGACCAC CTACGACGGCCTCACCTTCTTCGCGCCGACGGACGCCGCCTTCGCCGCGCTGAGGCCGGG CACGCTCAACGGCCTGAGCGACCAGGAGCAGGTGCAGCTGGTGCTCTACCACGTCCTCCC GCGCTACTACACCCTCGCCACGTTCCAGACGGCCAGCAACCCGCTGCGCACGCAGGCCAC GGGCCCCGCCGGCGTGTACACCGTCAACGTCACCACCACCACGGGGCAGAGCCTCGTCAA CGTGTCCACCGGCGTCGCCGCCGTCCCCCTCGGCACCACGCTCTCCGCCGACTTCCCGCT CGCCGTCTACTCCGTCGACGGCGTGCTCCTGCCGGAGCAGATGTTCGGGAAGGCCAAGGC TCCCGCGCCGGCCGCCGCGCCCGCGTCCGCCGCCGGGAAGGGCGCCAATAAGGAGCACAA GAAGGGCGGCGCCATGCCCAAGAATGAGGTCGCGGCCACCGCGCCGACGGCCGGAGCTGG AGGAGAAGATTCAGATGACAGCGCCACCACCAATGCGGTGGCCGTTGCAGGCGCGGCCGG TGTGGTGTGGACTGCTGCTCTCGTGGGGATTGCCAATCTTGTCATCGCGTAGAAAGTGTG TGCTTGTCTTTTTCTCCTTCGCCGTTTTCTTTCGTTTTCGTCGTTGCATATGTTTCATTG CACGTGTCCTATTTTGTATGTATGCAAGAGTATTTATATATGTTGATGATGATTCACTCA GTGAAATTTACTGGCTTCTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)