These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9746#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3232 fasta sequence [CTCTTCTCGTCTCCCCACTGGCCGCCGCCACGTCTCGTCTCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCGGGAGAAGGGTTGGGTTGGTGAAAGAGAGATGAGGGAGATGATGGGTCCTCCCCGCCGCGGCCCGGCGTACAAGACGAAGCTGTGCGCGCTGTGGAGGCAAGGCGAGTGCAACCGCGCCTCCTGCAGCTTCGCCCACGGCGACGCCGAGCTCCGTGGCCCGCCGCCTCGTTCCCCGTTCCCGCCTCGCGGTGGACCTGGTATGCGCGCACCCCCTCTCCCTCCTCCCCTTCCCCGTCTCGCTCTCCCCTTCCCATCTGCTTTTCTGCTTCTCGGCGGTTGCCGTGTGCTCTCGATCCGCAGCTAGGTGGCTCTAAATCTGTTCTTCTGCAATGGAATTACTGTCTCCGCCGATGTTCTATTGTGGACAGATTGTGCCGATTGTTTTCTAGGAAATTATTCAGACGGAGTGAAACTGGGTTGAGTGTGATCTGCTATCAGTTTGAAAAGTTTGGGGGATATTCATATTTTGAGAAGATTCATGGTGTCCTACCATGGCCCCAAGAAAGAGCATTCTTTTTAAAATAGGAGTATACATCGTTTCATCTGTTTATGTTGGATTTCGTTTATAAATCCTGAGAGGATGGGCTGCATATGTGGGGAATATGACAGACAGTGCGGGATGCTGGTTGTACAGCGAAGTGAAAGAGATATCAATTCCATCTGCGCTGTGTGCTTTCTGCAGAAACTTTTGGAAATGTTGTGGAACTGAGCTAGTAGTAAGAGAAAATGATTAGAAGAATACCAACCATGGTAACATCTGACAAGAGCTGCCCTGTAAGATAAACACTGATGACCTGGTTTCTATCTCTGGCTACTTGTTGGAAGAAATATACTCTACAGCCTGCACCTGGTCATGTGATATCAGCACTAGAGTCATTTATATACAAAACTAGAGCGTAATAATTCCATCAGTTTGTGTGATATCATTTTGTTGTACTGTTTTATCGCCCATATATTATCCTTTTCTTATAGTACTTTGGCTGCCAAAGTTTCATGAACAATGTGACATCTTTGCTAATCATATTTTTGCTACTGTACAAATTAGCTGTTCCCAGAGAGATTTTCTCCAACCGACTACTTGCAGAGGATGACGCATCCTATTTTCATTGCACACCTTTTCAGTTGGTAATCAGACATTTTATGGTCGCTGGAATGCTTATCTTGCTACAGGAGATTTCTTGAGGGATATCATGTGGTTTCAGTCAGATGCATGTTATCTTAATGTGCTAAAGCACCTAGCAGCTTTTGCAACTAATTGTAACAAATTTGCTGAATACACAGCGGCAAGGTCTCCTCTTGGGCTTTATTCTTGCCTGCCATTCCAAGTATGATCACAGAAATATAAAATTTGAAGTCAATACCAATAATATCTGGACAAGTGGAATTAGGTTTGTTCGACAATATTGGAATTTGGAAGATCTTTCTTCGTGATAATCTCAGTATGATGTCAAAAATTGGATATTCCATCCATTATTCACTTCTCATGACTGACACGTTACAAGGTGCTGGATTTATTTTTTAAGTGGTGCATCATACACGTGATATGTGATCATATATTGGTCTCCCTCATGCATTAGTCTCATTGGATCTGCTCTTTTATGCCCCCCTGGGGTTATGTTGGTGCCTCTGCTACTTACTGATAATTGAATAATCATATGGCTCAAGGTTGTGGTAAGCTTAATGGGTTTGTGTGCTGCCTCATATGTGTATAGCTCCTCTATCTTTTGTGGCATATTGCTTCTTTGTACATATATGTATGTAAAAACTACCATACTGAATTGTAGGGAGACGAGACCATAGACCTGATGACTTTAGAGGTAGGCATCTGAGACCCCATAGGAGGAATTCCCCTGAAAGAGATGCCAGGGATCATTTGTTCCGTGATCACAGACCGCGCTCTCGAGATAGAGGCTCTAGTCATTCAAGATCTCCCATCAGGAAGAGGCATAGAAAGAAGCTTGAGGGTGGAAAAACTAATTCATCAGAAAGTTTGAACTCCTCTGATAACGAAGATAGAAAAAAGGATGATAGATTCAACAAAGCTGATGATAAACATGATAATGAAGCACAGCTGCAACGCATTCAACTGGATATGGAAGCATTACATGAGGAGAAATCTTCACTGGAGGTGATACTGAATGGCAAGATCAATGAAGCATCCAAACTTTCTAGCAGAATAGCTGATCTTGAATCACAATTGAACGATGAAAAAGAAGCTTGCGAAAGGATGGCCTCAAAAACAAAGAAACTCATCAAAGCACATGCACGCTATGTGAAAGCTCAGGATGATTTAAAGAGGTCGCAAGCTCGTTTTGAGAGGTTCGCTGATTTGCTTGCTTCAGATACCTTGAAGCCGTGTAGCAAGGATCAGGGTTCTAGTGCTGCTAAGGAAGATCCATATAATGCTTATGAAATGAGTCCAAGTGATCAACGGCAGAATCATGAAACAACTAGAAAAAGATCCGTTGCCCTCTCAACTAGCGAAGAAGGAAGGAATGGGAAGAAAAGGAGAGAGAGTTATGACAACAGGGATCCTATGTCAGAGAAATATAGACCAGAAGATGCTCTAGAACCTTTTCAGAGCAGCAAGGGAACTGAGGCAAAAGAACTATTATCTGTGAAGAAGAATTTGGGGGATGGTGACAACAATGAGAAAGGAAATGTTGTTTCTTCTGCAAATGTTTTTACAGATAGGTATGAGGGCGGTGATGATGATGATGTTCTTGTGGACTAGTAAATTCATGCAGATGGAGATTGACAAAGATTTCAGCAGTAAGGAGTAGGGTGAAGTATGGAACATGCGTTCATTGCCATGCCAGTTGCGTTTTCACAGACTAACCTGAAACTAAGGCTGCCAGCCTGTTATTTATCTTAATGTATCATTTAATACA-CCGGGCATTAGGAATTAAGCATCTCGATAACTTCTGTGGCGAAGACGAGTTGCATTGTTCTCAAACAGGTTATTCT-CACATTTGGGCAAACTGTGCGTCGTTATTACCATGGATTCCAAGTAGCCTGTATGGATAATGTATCTGGCAGCCTATTCGAGTTAGGTTTGGTATTCATGGATTCATCATTGTGTTGTAAATTTGTAATGCTGCGATCTTTAGCGTCTGTGTTACTACAGCATCCCATGGTTTCACTCGGCAAAAAAAAAA] [+] EMBL AK064816 [CTCTTCTCGTCTCCCCACTGGCCGCCGCCACGTCTCGTCTCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCGGGAGAAGGGTTGGGTTGGTGAAAGAGAGATGAGGGAGATGATGGGTCCTCCCCGCCGCGGCCCGGCGTACAAGACGAAGCTGTGCGCGCTGTGGAGGCAAGGCGAGTGCAACCGCGCCTCCTGCAGCTTCGCCCACGGCGACGCCGAGCTCCGTGGCCCGCCGCCTCGTTCCCCGTTCCCGCCTCGCGGTGGACCTGGTATGCGCGCACCCCCTCTCCCTCCTCCCCTTCCCCGTCTCGCTCTCCCCTTCCCATCTGCTTTTCTGCTTCTCGGCGGTTGCCGTGTGCTCTCGATCCGCAGCTAGGTGGCTCTAAATCTGTTCTTCTGCAATGGAATTACTGTCTCCGCCGATGTTCTATTGTGGACAGATTGTGCCGATTGTTTTCTAGGAAATTATTCAGACGGAGTGAAACTGGGTTGAGTGTGATCTGCTATCAGTTTGAAAAGTTTGGGGGATATTCATATTTTGAGAAGATTCATGGTGTCCTACCATGGCCCCAAGAAAGAGCATTCTTTTTAAAATAGGAGTATACATCGTTTCATCTGTTTATGTTGGATTTCGTTTATAAATCCTGAGAGGATGGGCTGCATATGTGGGGAATATGACAGACAGTGCGGGATGCTGGTTGTACAGCGAAGTGAAAGAGATATCAATTCCATCTGCGCTGTGTGCTTTCTGCAGAAACTTTTGGAAATGTTGTGGAACTGAGCTAGTAGTAAGAGAAAATGATTAGAAGAATACCAACCATGGTAACATCTGACAAGAGCTGCCCTGTAAGATAAACACTGATGACCTGGTTTCTATCTCTGGCTACTTGTTGGAAGAAATATACTCTACAGCCTGCACCTGGTCATGTGATATCAGCACTAGAGTCATTTATATACAAAACTAGAGCGTAATAATTCCATCAGTTTGTGTGATATCATTTTGTTGTACTGTTTTATCGCCCATATATTATCCTTTTCTTATAGTACTTTGGCTGCCAAAGTTTCATGAACAATGTGACATCTTTGCTAATCATATTTTTGCTACTGTACAAATTAGCTGTTCCCAGAGAGATTTTCTCCAACCGACTACTTGCAGAGGATGACGCATCCTATTTTCATTGCACACCTTTTCAGTTGGTAATCAGACATTTTATGGTCGCTGGAATGCTTATCTTGCTACAGGAGATTTCTTGAGGGATATCATGTGGTTTCAGTCAGATGCATGTTATCTTAATGTGCTAAAGCACCTAGCAGCTTTTGCAACTAATTGTAACAAATTTGCTGAATACACAGCGGCAAGGTCTCCTCTTGGGCTTTATTCTTGCCTGCCATTCCAAGTATGATCACAGAAATATAAAATTTGAAGTCAATACCAATAATATCTGGACAAGTGGAATTAGGTTTGTTCGACAATATTGGAATTTGGAAGATCTTTCTTCGTGATAATCTCAGTATGATGTCAAAAATTGGATATTCCATCCATTATTCACTTCTCATGACTGACACGTTACAAGGTGCTGGATTTATTTTTTAAGTGGTGCATCATACACGTGATATGTGATCATATATTGGTCTCCCTCATGCATTAGTCTCATTGGATCTGCTCTTTTATGCCCCCCTGGGGTTATGTTGGTGCCTCTGCTACTTACTGATAATTGAATAATCATATGGCTCAAGGTTGTGGTAAGCTTAATGGGTTTGTGTGCTGCCTCATATGTGTATAGCTCCTCTATCTTTTGTGGCATATTGCTTCTTTGTACATATATGTATGTAAAAACTACCATACTGAATTGTAGGGAGACGAGACCATAGACCTGATGACTTTAGAGGTAGGCATCTGAGACCCCATAGGAGGAATTCCCCTGAAAGAGATGCCAGGGATCATTTGTTCCGTGATCACAGACCGCGCTCTCGAGATAGAGGCTCTAGTCATTCAAGATCTCCCATCAGGAAGAGGCATAGAAAGAAGCTTGAGGGTGGAAAAACTAATTCATCAGAAAGTTTGAACTCCTCTGATAACGAAGATAGAAAAAAGGATGATAGATTCAACAAAGCTGATGATAAACATGATAATGAAGCACAGCTGCAACGCATTCAACTGGATATGGAAGCATTACATGAGGAGAAATCTTCACTGGAGGTGATACTGAATGGCAAGATCAATGAAGCATCCAAACTTTCTAGCAGAATAGCTGATCTTGAATCACAATTGAACGATGAAAAAGAAGCTTGCGAAAGGATGGCCTCAAAAACAAAGAAACTCATCAAAGCACATGCACGCTATGTGAAAGCTCAGGATGATTTAAAGAGGTCGCAAGCTCGTTTTGAGAGGTTCGCTGATTTGCTTGCTTCAGATACCTTGAAGCCGTGTAGCAAGGATCAGGGTTCTAGTGCTGCTAAGGAAGATCCATATAATGCTTATGAAATGAGTCCAAGTGATCAACGGCAGAATCATGAAACAACTAGAAAAAGATCCGTTGCCCTCTCAACTAGCGAAGAAGGAAGGAATGGGAAGAAAAGGAGAGAGAGTTATGACAACAGGGATCCTATGTCAGAGAAATATAGACCAGAAGATGCTCTAGAACCTTTTCAGAGCAGCAAGGGAACTGAGGCAAAAGAACTATTATCTGTGAAGAAGAATTTGGGGGATGGTGACAACAATGAGAAAGGAAATGTTGTTTCTTCTGCAAATGTTTTTACAGATAGGTATGAGGGCGGTGATGATGATGATGTTCTTGTTGACTAGTAAATTCATGCAGATGGAGATTGACAAAGATTTCAGCAGTAAGGAGTAGGGTGAAGTATGGAACATGCGTTCATTGCCATGCCAGTTGCGTTTTCACAGACTAACCTGAAACTAAGGCTGCCAGCCTGTTATTTATCTTAATGTATCATTTAATACA CCGGGCATTAGGAATTAAGCATCTCGATAACTTCTGTGGCGAAGACGAGTTGCATTGTTCTCAAACAGGTTATTCT CACATTTGGGCAAACTGTGCGTCGTTATTACCATGGATTCCAAGTAGCCTGTATGGATAATGTATCTGGCAGCCTATTCGAGTTAGGTTTGGTATTCATGGATTCATCATTGTGTTGTAAATTTGTAATGCTGCGATCTTTAGCGTCTGTGTTACTACAGCATC ] [+] EMBL CB663456 [ TCTTCTCGTCTCCCCACTGGCCGCCGCCACGTCTCGTCTCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCGGGAGAAGGGTTGGGTTGGTGAAAGAGAGATGAGGGAGATGATGGGTCCTCCCCGCCGCGGCCCGGCGTACAAGACGAAGCTGTGCGCGCTGTGGAGGCAAGGCGAGTGCAACCGCGCCTCCTGCAGCTTCGCCCACGGCGACGCCGAGCTCCGTGGCCCGCCGCCTCGTTCCCCGTTCCCGCCTCGCGGTGGACCTGGTATGCGCGCACCCCCTCTCCCTCCTCCCCTTCCCCGTCTCGCTCTCCCCTTCCCATCTGCTTTTCTGCTTCTCGGCGGTTGCCGTGTGCTCTCGATCCGCAGCTAGGTGGCTCTAAATCTGTTCTTCTGCAATGGAATTACTGTCTCCGCCGATGTTCTATTGTGGACAGATTGTGCCGATTGTTTTCTAGGAAATTATTCACACGGAGTGAAACTGGGTTGAGTGTGATCTGCTATCAGTTTGAAAAGTTTGGGGGATATTCATATTTTGAGAAGATTCA ] [+] EMBL CF306696 [ CGCCTCGCGGTGGACCTGGTATGCGCGCACCCCCTCTCCCTCCTCCCCTTCCCCGTCTCGCTCTCCCCTTCCCATCTGCTTTTCTGCTTCTCGGCGGTTGCCGTGTGCTCTCGATCCGCAGCTAGGTGGCTCTAAATCTGTTCTTCTGCAATGGAATTACTGTCTCCGCCGATGTTCTATTGTGGACAGATTGTGCCGATTGTTTTCTAGGAAATTATTCAGACGGAGTGAAACTGGGTTGAGTGTGATCTGCTATCAGTTTGAAAAGTTTGGGGGATATTCATATTTTGAGAAGATTCATGGTGTCCTACCATGGCCCCAAGAAAGAGCATTCTTTTTAAAATAGGAGTATACATCGTTTCATCTGTTTATGTTGGATTTCGTTTATAAATCCTGAGAGGATGGGCTGCATATGTGGGGAATATGACAGACAGTGCGGGATGCTGGTTGTACAGCGAAGTGAAAGAGATATCAATTCCATCTGCGCTGTGTGCTTTCTGCAGAAACTTTTGGAAATGTTGTGGAACTGAGCTAGTAGTAAGAGAAAATGATTAGAAGAATACCAACCATGGTAACATCTGACA ] [-] EMBL CB663457 [ GGTTCGCTGATTTGCTTGCTTCAGATACCTTGAAGCCGTGTAGCAAGGATCAGGGTTCTAGTGCTGCTAAGGAAGATCCATATAATGCTTATGAAATGAGTCCAAGTGATCAACGGCAGAATCATGAAACAACTAGAAAAAGATCCGTTGCCCTCTCAACTAGCGAAGAAGGAAGGAATGGGAAGAAAAGGAGAGAGAGTTATGACAACAGGGATCCTATGTCAGAGAAATATAGACCAGAAGATGCTCTAGAACCTTTTCAGAGCAGCAAGGGAACTGAGGCAAAAGAACTATTATCTGTGAAGAAGAATTTGGGGGATGGTGACAACAATGAGAAAGGAAATGTTGTTTCTTCTGCAAATGTTTTTACAGATAGGTATGAGGGCGGTGATGATGATGATGTTCTTGTGGACTAGTAAATTCATGCAGATGGAGATTGACAAAGATTTCAGCAGTAAGGAGTAGGGTGAAGTATGGAACATGCGTTCATTGCCATGCCAGTTGCGTTTTCACAGACTAACCTGAAACTAAGGCTGCCAGCCTGTTATTTATCTTAATGTATCATTTAATACA CCGGGCATTAGGAATTAAGCATCTCGATAACTTCTGTGGCGAAGACGAGTTGCATTGTTCTCAAACAGGTTATTCT CACATTTGGGCAAACTGTGCGTCGTTATTACCATGGATTCCAAGTAGCCTGTATGGATAATGTATCTGGCAGCCTATTCGAGTTAGGTTTGGTATTCATGGATTCATCATTGTGTTGTAAATTTGTAATGCTGCGATCTTTAGCGTCTGTGTTACTACAGCATCCCATGGTTTCACTCGGCA ] [+] EMBL CA766267 [ acgaGACAACAGGGATCCTATGTCAGAGAAATATAGACCNGAAGATGCTCTAGAACCTTTTCAGAGCAGCGAGGGAACTGAGGCAAAAGAACTATTATCTGTGAAGAAGAATTTGGGGGATGGTGACAACAATGAGAAAGGAAATGTTGTTTCTTCTGCAAATGTTTTTACAGATAGGTATGAGGGCGGTGATGATGACGATGTTCTTGTGGACTAGTAAATTCATGCAGATGGAGATTGACAAAGATTTCAGCAGTAAGGAGTAGGGTGAAGTATGGAACATGCGTTCATTGCCATGCCAGTTGCGTTTTCACAGACTAACCTGAAACTAAGGCTGCCAGCCTGTTATTTATCTTAATGTATCATTTAATACA CCGGGCATTAGGAATTAAGCATCTCGATAACTTCTGTGGTGAAGACGAGTTGCATTGTTCTCAAACAGGTTATTCT CACATTTGGGCAAACTGTGCGTCGTTATTACCATGGATTTCAAGTAGCCTGTATGGATAATGTATCTGGCAGCCTATTCGAGTTAGGTTTGGTATTCATGGATTCATCATTGTGTTGTAAATTTGTAATGCTGCGATCTTTAGCGTCTGTGTTACTA ] [+] EMBL BI807083 [ tcaatgTTAANACACCCGGGCATTAGGAATTAAGCATCTCGATAACTTCTGTGGCGAAGACGAGTTGCATTGTTCTCAAACAGGTTATTCTGCACATTTGGGCAAACTGTGCGTCGTTANTACCATGGATTCCAAGTAGCCTGTATGGATAATGTATCT GCAGCCTATTCGAGTTA GTTT GTATTCATGGATTCATCATTGTGTTGTAAATTTGTAAT CTGCGATCTTTAGCGTCTGTGTTACTACAGCATCCCATGGTTTCACTC GCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||