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Oryza sativa
cluster # 975 cluster # 975       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_975#0 length = 2218 sequences # 2  

consensusID : consensus_975#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2218
fasta sequence
                              [AGGGAGTGCGCTTTTGTCTTGGTCATTGATCATTTCCACGATGAGATCCTGAAAATATTATCAGAGCTTCATTCTGATCACCACAGCCTCTTTCTTTTCTTGAAAACTGCGATTGAAGTGCACTTGTCAGGAAAACTGAATTTCAGTGAACTCAATGCCAGAAAAAATAGCACAGTTGAACTTCAATACTCATCCCGTGAACTTGAATTTTATATACAGAGACTTTCAAATCTTCCCAAGTTGTTGGACCGCAATCCTGTTATTATGACTGATGAGATTGTTGAACTCTATCTGGAGCTTCTATGTCAGTACGAGCGAAGGTCTGTTTTGAAGTTTCTGGAGACTTTTGACAGTTACAGATTGGAGCGGTGTTTGCATCTTTGTTTAGATTATGGGGTTACAGATGCTGCTGCATTCTTGCAAGAGAGAGTTGGTGATGTTGGGAGTGCACTGGCACTTATTCTAGCAGGTCTTGATGAGAAAATCAACCTATTTATTTCTTCAGTGGAAAATGCTTTCTCTGGGATTGCATCAAAAAGTATATCTGAGATAGAGCAGCCAGACATTGTTCTAAAAATGAGTGAGGCTCATCCTGTGCTTGATGCATTACGTGCTGCCATCGGATTGTGTCAAAGGAATTCACAAAGATTGAACCCAGAGGAGTCCCAGTCCCTTTGGTTCCAACTGCTTGACTCCTTCTCAGAGCCCCTGAAAAAATTGTATGGAAGCAAGGATGTAAATGGAAAAGGTGTCAGGTCTAATGGGAGTGAAACATCGAGTAGACAGCCAAAGGACAAAGGATTCTCACGAAAAACAAGGATTTCAGCTTATCAGAGGTGCTTGAATGCACTGCGGAGAGTATTTTCGCAGTTTGTTGGAGAAATAATCGAGGCAATGGCTGGACATATACCCTTACCAGCAATCATGGGAAAGCTATTATCTGACAACAGGAGTCAAGAGTTTGGTGATTTTAAGCTCGTTATACATAGAATGCTGTCTATGTATCTTTATGAAAAAAGAATACTGGAAACAGCCAAGTCAGTAATTGAGGATGATTCATTCTACACCTTGAGCTTACTAAAGAGAGGGGTTTGCCATGGACTTGCTCCACAGACTTTTGTATGTTGCATATGCAACTGCTCTCTTTCAAAAGAAAGTGCTGTTTCAGCAATACGAGTATTCAGTTGTGGACATGCAACTCATCTCCAATGTGAGTCTGAACAAAGTAAGTCATCCAATAGGGATTCCAAAGATGGATGCCCAATTTGTCTTTCAACTAGTAATACACAAGCCCAAAACAAATCACCTATATCAGAGAATGGGCTTGGGAAACATTTTGGGGCTGAAAGCGAGGTATCACATGGTACCTATCATACTCATGAAACAGATCATGTCGACAGATCTCGTGGGCTTCAGCAGATGTCACGGTATGAAATACTGAATCATCTTCAGAGGCCACAGAGTTTGCATATAGAAACTGTACCTCCATTGAGGCTTTCACCACCAGCGATATATCATGAAAAGATACAGAAGAGAACAACCACGATGGGAGAATCCAGCAAGCATTCAGTTAGAACTGAAAAACCCCAGAGAATATGGCAAATGAAGGAACCAAGATCAAAAAGATCAGGGAACCGAGTTCTGCCAAAGTCAAGCATGTTGAGTTCTCAGAATAATCAAGTGCGATAGTGTAAATATAATATGGTATGAATTTGACAATTCTTAAAATGATTCGAACTGATACAAACTGATTTGGATCGAGCCATCATGTTTCAACTTTCAACTGATCATTGATTTGCCAGTGTGGTTGTGCTGCTCTTCCTTTGTACTCAATTCTCATCTTGGTGATGCATTAAGGCTGTTTGGAGTAGTGCAATTCTTCTCCCACGGTACTTCTGTTGAAGCTGGGGAGATGAATACCAGATCTCAAGGCAAAGGCGGGAGCGGAGAAGGGCAACTAGATCAGGTGACCCTGAGAAGCTTTAACTTAGAACACAAAAAAACTAATGCGATAGAAAATTTTTTGGGGGGCAATTCATCATGAAGTATTTCTGTACAGAGCGAACACGTGATGACGCCATCCTTACACTTAGCATTACATGACTTTCTTGCGTTTCGACTTTTCTTTTTGTGTAAAATGTGAAGTACACAGGAACTCTGCGATGTATAGCATATGAGACATTACATGATTTTGATCAACTGAGCAATGATATCAACA]

[+] EMBL AK064457             [AGGGAGTGCGCTTTTGTCTTGGTCATTGATCATTTCCACGATGAGATCCTGAAAATATTATCAGAGCTTCATTCTGATCACCACAGCCTCTTTCTTTTCTTGAAAACTGCGATTGAAGTGCACTTGTCAGGAAAACTGAATTTCAGTGAACTCAATGCCAGAAAAAATAGCACAGTTGAACTTCAATACTCATCCCGTGAACTTGAATTTTATATACAGAGACTTTCAAATCTTCCCAAGTTGTTGGACCGCAATCCTGTTATTATGACTGATGAGATTGTTGAACTCTATCTGGAGCTTCTATGTCAGTACGAGCGAAGGTCTGTTTTGAAGTTTCTGGAGACTTTTGACAGTTACAGATTGGAGCGGTGTTTGCATCTTTGTTTAGATTATGGGGTTACAGATGCTGCTGCATTCTTGCAAGAGAGAGTTGGTGATGTTGGGAGTGCACTGGCACTTATTCTAGCAGGTCTTGATGAGAAAATCAACCTATTTATTTCTTCAGTGGAAAATGCTTTCTCTGGGATTGCATCAAAAAGTATATCTGAGATAGAGCAGCCAGACATTGTTCTAAAAATGAGTGAGGCTCATCCTGTGCTTGATGCATTACGTGCTGCCATCGGATTGTGTCAAAGGAATTCACAAAGATTGAACCCAGAGGAGTCCCAGTCCCTTTGGTTCCAACTGCTTGACTCCTTCTCAGAGCCCCTGAAAAAATTGTATGGAAGCAAGGATGTAAATGGAAAAGGTGTCAGGTCTAATGGGAGTGAAACATCGAGTAGACAGCCAAAGGACAAAGGATTCTCACGAAAAACAAGGATTTCAGCTTATCAGAGGTGCTTGAATGCACTGCGGAGAGTATTTTCGCAGTTTGTTGGAGAAATAATCGAGGCAATGGCTGGACATATACCCTTACCAGCAATCATGGGAAAGCTATTATCTGACAACAGGAGTCAAGAGTTTGGTGATTTTAAGCTCGTTATACATAGAATGCTGTCTATGTATCTTTATGAAAAAAGAATACTGGAAACAGCCAAGTCAGTAATTGAGGATGATTCATTCTACACCTTGAGCTTACTAAAGAGAGGGGTTTGCCATGGACTTGCTCCACAGACTTTTGTATGTTGCATATGCAACTGCTCTCTTTCAAAAGAAAGTGCTGTTTCAGCAATACGAGTATTCAGTTGTGGACATGCAACTCATCTCCAATGTGAGTCTGAACAAAGTAAGTCATCCAATAGGGATTCCAAAGATGGATGCCCAATTTGTCTTTCAACTAGTAATACACAAGCCCAAAACAAATCACCTATATCAGAGAATGGGCTTGGGAAACATTTTGGGGCTGAAAGCGAGGTATCACATGGTACCTATCATACTCATGAAACAGATCATGTCGACAGATCTCGTGGGCTTCAGCAGATGTCACGGTATGAAATACTGAATCATCTTCAGAGGCCACAGAGTTTGCATATAGAAACTGTACCTCCATTGAGGCTTTCACCACCAGCGATATATCATGAAAAGATACAGAAGAGAACAACCACGATGGGAGAATCCAGCAAGCATTCAGTTAGAACTGAAAAACCCCAGAGAATATGGCAAATGAAGGAACCAAGATCAAAAAGATCAGGGAACCGAGTTCTGCCAAAGTCAAGCATGTTGAGTTCTCAGAATAATCAAGTGCGATAGTGTAAATATAATATGGTATGAATTTGACAATTCTTAAAATGATTCGAACTGATACAAACTGATTTGGATCGAGCCATCATGTTTCAACTTTCAACTGATCATTGATTTGCCAGTGTGGTTGTGCTGCTCTTCCTTTGTACTCAATTCTCATCTTGGTGATGCATTAAGGCTGTTTGGAGTAGTGCAATTCTTCTCCCACGGTACTTCTGTTGAAGCTGGGGAGATGAATACCAGATCTCAAGGCAAAGGCGGGAGCGGAGAAGGGCAACTAGATCAGGTGACCCTGAGAAGCTTTAACTTAGAACACAAAAAAACTAATGCGATAGAAAATTTTTTGGGGGGCAATTCATCATGAAGTATTTCTGTACAGAGCGAACACGTGATGACGCCATCCTTACACTTAGCATTACATGACTTTCTTGCGTTTCGACTTTTCTTTTTGTGTAAAATGTGAAGTACACAGGAACTCTGCGATGTATAGCATATGAGACATTACATGATTTTGATCAACTGAGCAATGATATCAACA]
[+] EMBL CF323248             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGCAGTTTGTTGGAGAAATAATCGAGGCAATGGCTGGACATATACCCTTACCAGCAATCATGGGAAAGCTATTATCTGACAACAGGAGTCAAGAGTTTGGTGATTTTAAGCTCGTTATACATAGAATGCTGTCTATGTATCTTTATGAAAAAAGAATACTGGAAACAGCCAAGTCAGTAATTGAGGATGATTCATTCTACACCTTGAGCTTACTAAAGAGAGGGGTTTGCCATGGACTTGCTCCACAGACTTTTGTATGTTGCATATGCAACTGCTCTCTTTCAAAAGAAAGTGCTGTTTCAGCAATACGAGTATTCAGTTGTGGACATGCAACTCATCTCCAATGTGAGTCTGAACAAAGTAAGTCATCCAATAGGGATTCCAAAGATGGATGCCCAATTTGTCTTTCAACTAGTAATACACAAGCCCAAAACAAATCACCTATATCAGAGAATGGGCTTGGGAAACATTTTGGGGCTGAAAGCGAGGTATCACATGGCACCTATCATACTCATGAAACAGATCATGTCGACAGATCTCGTGGGCTTCAGCAGATGTCACGGTATGAAATACTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_975#0 AGGGAGTGCGCTTTTGTCTTGGTCATTGATCATTTCCACGATGAGATCCTGAAAATATTA TCAGAGCTTCATTCTGATCACCACAGCCTCTTTCTTTTCTTGAAAACTGCGATTGAAGTG CACTTGTCAGGAAAACTGAATTTCAGTGAACTCAATGCCAGAAAAAATAGCACAGTTGAA CTTCAATACTCATCCCGTGAACTTGAATTTTATATACAGAGACTTTCAAATCTTCCCAAG TTGTTGGACCGCAATCCTGTTATTATGACTGATGAGATTGTTGAACTCTATCTGGAGCTT CTATGTCAGTACGAGCGAAGGTCTGTTTTGAAGTTTCTGGAGACTTTTGACAGTTACAGA TTGGAGCGGTGTTTGCATCTTTGTTTAGATTATGGGGTTACAGATGCTGCTGCATTCTTG CAAGAGAGAGTTGGTGATGTTGGGAGTGCACTGGCACTTATTCTAGCAGGTCTTGATGAG AAAATCAACCTATTTATTTCTTCAGTGGAAAATGCTTTCTCTGGGATTGCATCAAAAAGT ATATCTGAGATAGAGCAGCCAGACATTGTTCTAAAAATGAGTGAGGCTCATCCTGTGCTT GATGCATTACGTGCTGCCATCGGATTGTGTCAAAGGAATTCACAAAGATTGAACCCAGAG GAGTCCCAGTCCCTTTGGTTCCAACTGCTTGACTCCTTCTCAGAGCCCCTGAAAAAATTG TATGGAAGCAAGGATGTAAATGGAAAAGGTGTCAGGTCTAATGGGAGTGAAACATCGAGT AGACAGCCAAAGGACAAAGGATTCTCACGAAAAACAAGGATTTCAGCTTATCAGAGGTGC TTGAATGCACTGCGGAGAGTATTTTCGCAGTTTGTTGGAGAAATAATCGAGGCAATGGCT GGACATATACCCTTACCAGCAATCATGGGAAAGCTATTATCTGACAACAGGAGTCAAGAG TTTGGTGATTTTAAGCTCGTTATACATAGAATGCTGTCTATGTATCTTTATGAAAAAAGA ATACTGGAAACAGCCAAGTCAGTAATTGAGGATGATTCATTCTACACCTTGAGCTTACTA AAGAGAGGGGTTTGCCATGGACTTGCTCCACAGACTTTTGTATGTTGCATATGCAACTGC TCTCTTTCAAAAGAAAGTGCTGTTTCAGCAATACGAGTATTCAGTTGTGGACATGCAACT CATCTCCAATGTGAGTCTGAACAAAGTAAGTCATCCAATAGGGATTCCAAAGATGGATGC CCAATTTGTCTTTCAACTAGTAATACACAAGCCCAAAACAAATCACCTATATCAGAGAAT GGGCTTGGGAAACATTTTGGGGCTGAAAGCGAGGTATCACATGGTACCTATCATACTCAT GAAACAGATCATGTCGACAGATCTCGTGGGCTTCAGCAGATGTCACGGTATGAAATACTG AATCATCTTCAGAGGCCACAGAGTTTGCATATAGAAACTGTACCTCCATTGAGGCTTTCA CCACCAGCGATATATCATGAAAAGATACAGAAGAGAACAACCACGATGGGAGAATCCAGC AAGCATTCAGTTAGAACTGAAAAACCCCAGAGAATATGGCAAATGAAGGAACCAAGATCA AAAAGATCAGGGAACCGAGTTCTGCCAAAGTCAAGCATGTTGAGTTCTCAGAATAATCAA GTGCGATAGTGTAAATATAATATGGTATGAATTTGACAATTCTTAAAATGATTCGAACTG ATACAAACTGATTTGGATCGAGCCATCATGTTTCAACTTTCAACTGATCATTGATTTGCC AGTGTGGTTGTGCTGCTCTTCCTTTGTACTCAATTCTCATCTTGGTGATGCATTAAGGCT GTTTGGAGTAGTGCAATTCTTCTCCCACGGTACTTCTGTTGAAGCTGGGGAGATGAATAC CAGATCTCAAGGCAAAGGCGGGAGCGGAGAAGGGCAACTAGATCAGGTGACCCTGAGAAG CTTTAACTTAGAACACAAAAAAACTAATGCGATAGAAAATTTTTTGGGGGGCAATTCATC ATGAAGTATTTCTGTACAGAGCGAACACGTGATGACGCCATCCTTACACTTAGCATTACA TGACTTTCTTGCGTTTCGACTTTTCTTTTTGTGTAAAATGTGAAGTACACAGGAACTCTG CGATGTATAGCATATGAGACATTACATGATTTTGATCAACTGAGCAATGATATCAACA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)