These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9755#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2639 fasta sequence [ATCTGAAGCAGACGCCTTTGCTTTCCTCCTGCTCTAGGGTTTTGCGTCTCGCGCCGGAGATCTCACCAATGGCGCCTCCCGCCGCCGCCGCCGCCGTGACGCTCGGTGGCAAGGGCGCCGCGCTCACCCCCGCCGCCGTCTACGCCCTCTCCCACGGCCTCGCCGACCCCGCGATCGACTGCTGCGCGTCCCCGCTCGTCCGCGTCGCCGACGCCGTCGCCGCGCTCTCCTGCGAGGCCGCGCGCGGGGACGTCGCGGCCTTTGATGTGCCGACCTCTGGTGATGGTCTCTCCGCCAAGGACGAGGCTGATGTCGCCGCCGATGTCAAGATGCTCCTCTTCGGGTCCAAGCTCGTCGGCGCAGCCGGTGGCGCCGATGCCGCGTCTTTCACTAAGGTGCCCACCGTGAATGGAATCTTCCGCGAGGCAGTGCGCGCGCTGCACGCGAGGGTGCGTATCGAGCTCAACGCTCCAGTGAAGTTGGGAAAGAGGGACGCTGTCCAAACCGGTGAGGGAAAGGAGGAGGCATTGGTTGCTCTGGCAACGCAACTCGCGAGGCCGGTACAGGCAATGCTCAAGCTTAGCGTTGCGCGGGCAAGGCTTTGTGTTGCGAGAATTGATGATGCTGAGCTCCGGAAGAAGCTTACTGATGGTGTTGAAGTCGATGATTTGAAGGGGATGCTTGGCAAGGTCACGATTGATTCGGATGCTGTATCTGTTTTGCGGGGTGTGTACAACTCCCTGCTCAAGTTCAGGGATATCCTTGCATGGGAAGCAGCTGTTGCCATGGCGGTGATCGAAATGGATAGTTCAATTGAGAAGCCACAAGCTTGTGAGGAGAATGAGGCGGGCAGTTCAACTGAAAATCCGCATGCTAGTGGAGAGAAACCAAAAGGTGACAAGAAGAGCAAGAAGAAGAAAACTTTGGGGAAGGGTACTTCTGCTGTACTGATGTTGCTTAGGGACCTTGTGACCAACGGAAAGGAGGTTCTTTCGGTGAATTCTGCACTACTTGCAGAGTGGGGAACCGAGCTCTCACTGTTGTTTGATCCAAAGTGTCCCAGATTGGTGTCCCTTGTGGACAAGGTGAAGGAGATTGTTGAGACCAATGAAGTGAGGAGATTGCCTAAAATTCCCAAGGGAACACGTGACTTTGGGAAAGAGCAAATGGCCATAAGGGAGCATGCCTTCTCAATAATAACAGGTGTATTCAAGATGCACGGTGCCGTTTCACTTGATACACCTGTATTTGAGCTGAGAGAAACACTTATGGGCAAATATGGTGAAGACTCAAAGTTGATTTATGACCTTGCTGATCAGGGTGGAGAGCTTTGCTCTTTGCGGTATGATCTGACTGTTCCATTTGCCCGATATGTTGCTATGAATAACATAAGTTCATTGAAGAGATACCAGATAGCTAAAGTATACAGGAGAGATAACCCGTCCAAGGGAAGATATCGAGAATTCTACCAATGCGACTTTGACATAGCTGGAGTATATGAAACAATGGAACCAGATTTTGAAGTTATC-AAAGTTTTAACTGAGTTGTTGGATCAGTTGGATATAGGCACGTATGAGATAAAA-CTAAACCACAGAAAGTTGCTTGATGGAATGTTAGAGATCTGTGGTGTGCCTCCTGAAAAGTTCAGAACGGTTTGCTCAAGCATTGACAAGCTAGACAAGCAAACATTTGAACAAGTGAAAAAGGAACTGGTGGACGAGAAGGGCATATCTAATGAAACTGCGGATAAGATTGGTGATTTAGTGAAAACTAGGGGACCACCGCTGGAAGTTTTGCTGGAATTGAGAAAGGAAGGTAGCAAGTTTATGGGGAACGCTGGGTCTGTTACTGCACTAAATGAGCTGGAGATACTATTCAAAGCTCTAGATAAAGCAAATGCAATAGGCAAGATTGTTTTTGATTTAAGCCTTGCTAGAGGCCTTGATTACTACACTGGTGTGATATATGAAGCTGTGTTCAAGGGCACCACTCAGGTTGGCTCCATTGCTGCTGGAGGCAGGTATGACAACCTTGTTGGTATGTTTAGTGGGAAGCAAGTCCCTGCCGTTGGTGTTAGCCTTGGAATAGAAAGAGTTTTCGCAATCATGGAGCAACAGGAGATGGAAAAGAATCAGATCCGGGCCACCGAGACGGAGGTATTGGTGTCGATTATCGGCAAGGACCTCATATTGGCCGCTGAGCTTGTTAGTGAACTGTGGAATGCTGGGATAAAGGCAGAGTTCAAACTCACTACTAGGATACAGAACCACTTGAAGTACGCGACGCAATCTGGCATTCCGTGGATGGTGCTGGTTGGTGAGTCTGAAATAAGCAGTGGAAAGGTGAAGCTGAAGAACTTGGCAGCCAGCCAGGAAGAGGAGGTTGACAGGACAGAGTTTGCTCAGGTGTTGAAACAGAAATTGAGAAACCCATAGAGAAGATTTTTAGAATATAATTTTGTAGTTCATGTTTCAACTTGTGATGCATCATACTTGCCTGTGTGAGTTCCTGGAAAATTCCGTTCGGCGTTTTGATTTATACTGGCTGTTTGAATTGGTTTACATGTTAAAGCGCTTGGTGTAATTGAATCAAATTACCAAATTCAAAACATTACTCTACTGATTGGTGACCAACTCATA] [+] EMBL AK099789 [ATCTGAAGCAGACGCCTTTGCTTTCCTCCTGCTCTAGGGTTTTGCGTCTCGCGCCGGAGATCTCACCAATGGCGCCTCCCGCCGCCGCCGCCGCCGTGACGCTCGGTGGCAAGGGCGCCGCGCTCACCCCCGCCGCCGTCTACGCCCTCTCCCACGGCCTCGCCGACCCCGCGATCGACTGCTGCGCGTCCCCGCTCGTCCGCGTCGCCGACGCCGTCGCCGCGCTCTCCTGCGAGGCCGCGCGCGGGGACGTCGCGGCCTTTGATGTGCCGACCTCTGGTGATGGTCTCTCCGCCAAGGACGAGGCTGATGTCGCCGCCGATGTCAAGATGCTCCTCTTCGGGTCCAAGCTCGTCGGCGCAGCCGGTGGCGCCGATGCCGCGTCTTTCACTAAGGTGCCCACCGTGAATGGAATCTTCCGCGAGGCAGTGCGCGCGCTGCACGCGAGGGTGCGTATCGAGCTCAACGCTCCAGTGAAGTTGGGAAAGAGGGACGCTGTCCAAACCGGTGAGGGAAAGGAGGAGGCATTGGTTGCTCTGGCAACGCAACTCGCGAGGCCGGTACAGGCAATGCTCAAGCTTAGCGTTGCGCGGGCAAGGCTTTGTGTTGCGAGAATTGATGATGCTGAGCTCCGGAAGAAGCTTACTGATGGTGTTGAAGTCGATGATTTGAAGGGGATGCTTGGCAAGGTCACGATTGATTCGGATGCTGTATCTGTTTTGCGGGGTGTGTACAACTCCCTGCTCAAGTTCAGGGATATCCTTGCATGGGAAGCAGCTGTTGCCATGGCGGTGATCGAAATGGATAGTTCAATTGAGAAGCCACAAGCTTGTGAGGAGAATGAGGCGGGCAGTTCAACTGAAAATCCGCATGCTAGTGGAGAGAAACCAAAAGGTGACAAGAAGAGCAAGAAGAAGAAAACTTTGGGGAAGGGTACTTCTGCTGTACTGATGTTGCTTAGGGACCTTGTGACCAACGGAAAGGAGGTTCTTTCGGTGAATTCTGCACTACTTGCAGAGTGGGGAACCGAGCTCTCACTGTTGTTTGATCCAAAGTGTCCCAGATTGGTGTCCCTTGTGGACAAGGTGAAGGAGATTGTTGAGACCAATGAAGTGAGGAGATTGCCTAAAATTCCCAAGGGAACACGTGACTTTGGGAAAGAGCAAATGGCCATAAGGGAGCATGCCTTCTCAATAATAACAGGTGTATTCAAGATGCACGGTGCCGTTTCACTTGATACACCTGTATTTGAGCTGAGAGAAACACTTATGGGCAAATATGGTGAAGACTCAAAGTTGATTTATGACCTTGCTGATCAGGGTGGAGAGCTTTGCTCTTTGCGGTATGATCTGACTGTTCCATTTGCCCGATATGTTGCTATGAATAACATAAGTTCATTGAAGAGATACCAGATAGCTAAAGTATACAGGAGAGATAACCCGTCCAAGGGAAGATATCGAGAATTCTACCAATGCGACTTTGACATAGCTGGAGTATATGAAACAATGGAACCAGATTTTGAAGTTATC AAAGTTTTAACTGAGTTGTTGGATCAGTTGGATATAGGCACGTATGAGATAAAA CTAAACCACAGAAAGTTGCTTGATGGAATGTTAGAGATCTGTGGTGTGCCTCCTGAAAAGTTCAGAACGGTTTGCTCAAGCATTGACAAGCTAGACAAGCAAACATTTGAACAAGTGAAAAAGGAACTGGTGGACGAGAAGGGCATATCTAATGAAACTGCGGATAAGATTGGTGATTTAGTGAAAACTAGGGGACCACCGCTGGAAGTTTTGCTGGAATTGAGAAAGGAAGGTAGCAAGTTTATGGGGAACGCTGGGTCTGTTACTGCACTAAATGAGCTGGAGATACTATTCAAAGCTCTAGATAAAGCAAATGCAATAGGCAAGATTGTTTTTGATTTAAGCCTTGCTAGAGGCCTTGATTACTACACTGGTGTGATATATGAAGCTGTGTTCAAGGGCACCACTCAGGTTGGCTCCATTGCTGCTGGAGGCAGGTATGACAACCTTGTTGGTATGTTTAGTGGGAAGCAAGTCCCTGCCGTTGGTGTTAGCCTTGGAATAGAAAGAGTTTTCGCAATCATGGAGCAACAGGAGATGGAAAAGAATCAGATCCGGGCCACCGAGACGGAGGTATTGGTGTCGATTATCGGCAAGGACCTCATATTGGCCGCTGAGCTTGTTAGTGAACTGTGGAATGCTGGGATAAAGGCAGAGTTCAAACTCACTACTAGGATACAGAACCACTTGAAGTACGCGACGCAATCTGGCATTCCGTGGATGGTGCTGGTTGGTGAGTCTGAAATAAGCAGTGGAAAGGTGAAGCTGAAGAACTTGGCAGCCAGCCAGGAAGAGGAGGTTGACAGGACAGAGTTTGCTCAGGTGTTGAAACAGAAATTGAGAAACCCATAGAGAAGATTTTTAGAATATAATTTTGTAGTTCATGTTTCAACTTGTGATGCATCATACTTGCCTGTGTGAGTTCCTGGAAAATTCCGTTCGGCGTTTTGATTTATACTGGCTGTTTGAATTGGTTTACATGTTAAAGCGCTTGGTGTAATTGAATCAAATTACCAAATTCAAAACATTACTCTACTGATTG ] [+] EMBL AK059520 [ TCCGGAAGAAGCTTACTGATGGTGTTGAAATCGATGATTTGAAGGGGATGCTTGGCAAGGTCACGATTGATTCGGATGCTGTATCTGTTTTGCGGGGTGTGTACAACTCCCTGCTCAAGTTCAGGGATATCCTTGCATGGGAAGCAGCTGTTGCCATGGCGGTGATCGAAATGGATAGTTCAATTGAGAAGCCACAAGCTTGTGAGGAGAATGAGGCGGGCAGTTCAACTGAAAATCCGCATGCTAGTGGAGAGAAACCAAAAGGTGACAAGAAGAGCAAGAAGAAGAAAACTTTGGGGAAGGGTACTTCTGCTGTACTGATGTTGCTTAGGGACCTTGTGACCAACGGAAAGGAGGTTCTTTCGGTGAATTCTGCACTACTTGCAGAGTGGGGAACCGAGCTCTCACTGTTGTTTGATCCAAAGTGTCCCAGATTGGTGTCCCTTGTGGACAAGGTGAAGGAGATTGTTGAGACCAATGAAGTGAGGAGATTGCCTAAAATTCCCAAGGGAACACGTGACTTTGGGAAAGAGCAAATGGCCATAAGGGAGCATGCCTTCTCAATAATAACAGGTGTATTCAAGATGCACGGTGCCGTTTCACTTGATACACCTGTATTTGAGCTGAGAGAAACACTTATGGGCAAATATGGTGAAGACTCAAAGTTGATTTATGACCTTGCTGATCAGGGTGGAGAGCTTTGCTCTTTGCGGTATGATCTGACTGTTCCATTTGCCCGATATGTTGCTATGAATAACATAAGTTCATTGAAGAGATACCAGATAGCTAAAGTATACAGGAGAGATAGCCCGTCCAAGGGAAGATATCGAGAATTCTACCAATGCGACTTTGACATAGCTGGAGTATATGAAACAATGGAACCAGATTTTGAAGTTATC AAAGTTTTAACTGAGTTGTTGGATCAGTTGGATATAGGCACGTATGAGATAAAA CTAAACCACAGAAAGTTGCTTGATGGAATGTTAGAGATCTGTGGTGTGCCTCCTGAAAAGTTCAGAACGGTTTGCTCAAGCATTGACAAGCTAGACAAGCAAACATTTGAACAAGTGAAAAAGGAACTGGTGGACGAGAAGGGCATATCTAATGAAACTGCGGATAAGATTGGTGATTTAGTGAAAACTAGGGGACCACCGCTGGAAGTTTTGCTGGAATTGAGAAAGGAAGGTAGCAAGTTTATGGGGAACGCTGGGTCTGTTACTGCACTAAATGAGCTGGAGATACTATTCAAAGCTCTAGATAAAGCAAATGCAATAGGCAAGATTGTTTTTGATTTAAGCCTTGCTAGAGGCCTTGATTACTACACTGGTGTGATATATGAAGCTGTGTTCAAGGGCACCACTCAGGTTGGCTCCATTGCTGCTGGAGGCAGGTATGACAACCTTGTTGGTATGTTTAGTGGGAAGCAAGTCCCTGCCGTTGGTGTTAGCCTTGGAATAGAAAGAGTTTTCGCAATCATGGAGCAACAGGAGATGGAAAAGAATCAGATCCGGGCCACCGAGACGGAGGTATTGGTGTCGATTATCGGCAAGGACCTCATATTGGCCGCTGAGCTTGTTAGTGAACTGTGGAATGCTGGGATAAAGGCAGAGTTCAAACTCACTACTAGGATACAGAACCACTTGAAGTACGCGACGCAATCTGGCATTCCGTGGATGGTGCTGGTTGGTGAGTCTGAAATAAGCAGTGGAAAGGTGAAGCTGAAGAACTTGGCAGCCAGCCAGGAAGAGGAGGTTGACAGGACAGAGTTTGCTCAGGTGTTGAAACAGAAATTGAGAAACCCATAGAGAAGATTTTTAGAATATAATTTTGTAGTTCATGTTTCAACTTGTGATGCATCATACTTGCCTGTGTGAGTTCCTGGAAAATTCCGTTCGGCGTTTTGATTTATACTGGCTGTTTGAATTGGTTTACATGTTAAAGCGCTTGGTGTAATTGAATCAAATTACCAAATTCAAAACATTACTCTACTGATTGGTGACCAACTCATA] [+] EMBL OSHISRS [ AAAGGTGACAAGAAGAGCAAGAAGAAGAAAACTTTGGGGAAGGGTACTTCTGCTGTACTGATGTTGCTTAGGGACCTTGTGACCAACGGAAAGGAGGTTCTTTCGGTGAATTCTGCACTACTTGCAGAGTGGGGAACCGAGCTCTCACTGTTGTTTGATCCAAAGTGTCCCAGATTGGTGTCCCTTGTGGACAAGGTGAAGGAGATTGTTGAGACCAATGAAGTGAGGAGATTGCCTAAAATTCCCAAGGGAACACGTGACTTTGGGAAAGAGCAAATGGCCATAAGGGAGCATGCCTTCTCAATAATAACAGGGGTATTCAAGATGCACGGTGCCGTTTCACTTGATACACCTGTATTTGAGCTGAGAGAAACACTTATGGGCAAATATGGTGAAGACTCAAAGTTGATTTATGACCTTGCTGATCAGGGTGGAGAGCTTTGCTCTTTGCGGTATGATCTGACTGTTCCATTTGCCCGATATGTTGCTATGAATAACATAAGTTCATTGAAGAGATACCAGATAGCTAAAGTATACAGGAGAGATAACCCGTCCAAGGGAAGATATCGAGAATTCTACCAATGCGACTTTGACATAGCTGGAGTATATGAAACAATGGAACCAGATTTTGAAGTTATC AAAGTTTTAACTGAGTTGTTGGATCAGTTGGATATAGGCACGTATGAGATAAAA CTAAACCACAGAAAGTTGCTTGATGGAATGTTAGAGATCTGTGGTGTGCCTCCTGAAAAGTTCAGAACGGTTTGCTCAAGCATTGACAAGCTAGACAAGCAAACATTTGAACAAGTGAAAAAGGAACTGGTGGACGAGAAGGGCATATCTAATGAAACTGCGGATAAGATTGGTGATTTAGTGAAAACTAGGGGACCACCGCTGGAAGTTTTGCTGGAATTGAGAAAGGAAGGTAGCAAGTTTATGGGGAACGCTGGGTCTGTTACTGCACTAAATGAGCTGGAGATACTATTCAAAGCTCTAGATAAAGCAAATGCAATAGGCAAGATTGTTTTTGATTTAAGCCTTGCTAGAGGCCTTGATTACTACACTGGTGTGATATATGAAGCTGTGTTCAAGGGCACCACTCAGGTTGGCTCCATTGCTGCTGGAGGCAGGTATGACAACCTTGTTGGTATGTTTAGTGGGAAGCAAGTCCCTGCCGTTGGTGTTAGCCTTGGAATAGAAAGAGTTTTCGCAATCATGGAGCAACAGGAGATGGAAAAGAATCAGATCCGGGCCACCGAGACGGAGGTATTGGTGTCGATTATCGGCAAGGACCTCATATTGGCCGCTGAGCTTGTTAGTGAACTGTGGAATGCTGGGATAAAGGCAGAGTTCAAACTCACTACTAGGATACAGAACCACTTGAAGTACGCGACGCAATCTGGCATTCCGTGGATGGTGCTGGTTGGTGAGTCTGAAATAAGCAGTGGAAAGGTGAAGCTGAAGAACTTGGCAGCCAGCCAGGAAGAGGAGGTTGACAGGACAGAGTTTGCTCAGGTGTTGAAACAGAAATTGAGAAACCCATAGAGAAGATTTTTAGAATATAATTTTGTAGTTCATGTTTCAACTTGTGATGCATCATACTTGCCTGTGTGAGTTCCTGGAAAATTCCGTTCGGCGTTTTGATTTATACTGGCTGTTTGAATTGGTTTACATGTTAAAGCGCTTGGTGTAATTGAATCAAAT ] [+] EMBL OS2731A [ GCACGGTGCCGTTTCACTTGATACACCTGTATTTGAGCTGAGAGAAACACTTATGGGCAAATATGGTGAAGACTCAAAGTTGATTTATGACCTTGCTGATCAGGGTGGAGAGCTTTGCTCTTTGCGGTATGATCTGACTGTTCCATTTGCCCGATATGTTGCTATGAATAACATAAGTTCATTGAAGAGATACCAGATAGCTAAAGTATACAGGAGAGATAACCCGTCCAAGGGAAGATATCGAGAATTCTACCAATGCGACTTTGACATAGCTGGAGTATATNAAACAATGGAACCAGATTTTGAAGTTATCAAAAGTTTTAACTGAGTTGTTGGNTCAGTTGGNTATAGGCACGTATGANATAAAANCTAAACCNCAGAAAngt ] [-] EMBL CB628367 [ TAGAGATCTGTGGTGTGCCTCCTGAAAAGTTCAGAACGGTTTGCTCAAGCATTGACAAGCTAGACAAGCAAACATTTGAACAAGTGAAAAAGGAACTGGTGGACGAGAAGGGCATATCTAATGAAACTGCGGATAAGATTGGTGATTTAGTGAAAACTAGGGGACCACCGCTGGAAGTTTTGCTGGAATTGAGAAAGGAAGGTAGCAAGTTTATGGGGAACGCTGGGTCTGTTACTGCACTAAATGAGCTGGAGATACTATTCAAAGCTCTAGATAAAGCAAATGCAATAGGCAAGATTGTTTTTGATTTAAGCCTTGCTAGAGGCCTTGATTACTACACTGGTGTGATATATGAAGCTGTGTTCAAGGGCACCACTCAGGTTGGCTCCATTGCTGCTGGAGGCAGGTATGACAACCTTGTTGGTATGTTTAGTGGGAAGCAAGTCCCTGCCGTTGGTGTTAGCCTTGGAATAGAAAGAGTTTTCGCAATCATGGAGCAACAGGAGATGGAAAAGAATCAGATCCGGGCCACCGAGACGGAGGTATTGGTGTCGATTATCGGCAAGGACCTCATATTGGCCGCTGAGCTTGTTAGTGAACTGTGGAATGCTGGGATAAAGGCAGAGTTCAAACTCACTACTAGGATACAGAACCACTTGAAGTACGCGACGCAATCTGGCATTCCGTGGATGGTGCTGGTTGGTGAGTCTGAAATAAGCAGTGGAAAGGTGAAGCTGAAGAACTTGGCAGCCAGCCAGGAAGAGGAGGTTGACAGGACAGAGTTTGCTCAGGTGTTGAAACAGAAATTGAGAAACCCATAGAGAAGATTTTTAGAATATAATTTTGTAGTTCATGTT ] [+] EMBL BI810547 [ AAAGAGTTTTC C ATCATGGA CCACAGGAGATGGAAAAGAATCAGATCC GGCCACCGAGACGGAGGTATTGGTGTCGATTATCGGCAAGGACCTCATATT GCCGCTGAGCTTGTTAGTGAACTGTGGAATGCTGGGATAAAGGCAGAGTTCAAACTCACTACTAGGATACAGAACCACTTGAAGTACGCGACGC ATCTGGCATTCCGTGGATGGTGCTGGTTGGTGAGTCTGAAATAA CAGTGGAAAGGTGAAGCTGAAGAACTT GCA CCAGCCAGGAAGAGGAGGTTGACAGGACAGAGTTTGCTCAGGTGTTGAAACAGAAATTGAGAAACCCATAGAGAAGATTTTTAGAATATAATTTTGTAGTTCATGTTTCAACTTGTGATGCATCATACTTGCC TGTGAGTTCCTGGAAAATTCCGTTCGGCGTTTTGATTTATACTGGCTGTTTGAATTGGTTTACATGTTAAAGCGCTTGGTGTAATTGAATCAAATTACC AATTCAAAACATTACTCTACTGATTGGTGACCcaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||