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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9776#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2655 fasta sequence
[GCGAAAAATTCCGCCGCCGCCGTTTCGTCGACCTCATCGGCGGCCATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTACTCCCCTTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCACCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGTCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCACTTGTGAGAACACTACCAGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTCATGACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATATCAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCATCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATGTTTATGTATATATACATCTAATTCGCGAATGCAAGGGAGCAATGTCATTTACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTATCACTGTGTCCTATCACAGAAGAGGTTGCAGTG]
[+] EMBL AK100099 [GCGAAAAATTCCGCCGCCGCCGTTTCGTCGACCTCATCGGCGGCCATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTACTCCCCTTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCACCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGTCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCACTTGTGAGAACACTACCAGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTCATGACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATATCAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCATCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATGTTTATGTATATATACATCTAATTCGCGAATGCAAGGGAGCAATGTCATTTACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTATCACTGTGTCCTATCACAGAAGAGGTTGCAGTG]
[+] EMBL CB632083 [ CGCCTCCTCCTCCTCCTCCTCCAAAGGCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCANATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAA ]
consensusID : consensus_9776#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2041 fasta sequence
[TTCCTCGAGCACTGTTGGCCTACTGGTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCACTTGTGAGAACACTACCGGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTTATGACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATATCAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCATCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAA-TGTTTATGTATATATACA-TCTAATTCGCGAATGCAAGGGAGCAATGTCATTT-ACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTATCACTGTGTCCTATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL AK105000 [TTCCTCGAGCACTGTTGGCCTACTGGTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCACTTGTGAGAACACTACCGGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTTATGACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATATCAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCATCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAA TGTTTATGTATATATACA TCTAATTCGCGAATGCAAGGGAGCAATGTCATTT ACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTATCACTGTGTCCTATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL OS38035 [ CTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATTGTTTATGTATATATACACTCTAATTCGCGAATACAAGGGAGCAATGTCATTTCACAGAGATGTGAATGGTATATGT ATCTGTACACAG GTGGGTAT ]
consensusID : consensus_9776#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 823 fasta sequence
[GAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGGGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACGAATGCATAATTGAGCGCCCCCCGACTATATCAGCCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCAAATTGATGTGGATACCTCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATGTTTATGTATATATACATCTAATTCGCGAATGCAAGGGAGCAATGTCATTTACAGAGAAGTGAATGGTGTATGTAATGGGTAAACAGAATGAGTATAAAGAGGTTGCAGTA]
[-] EMBL CB632084 [GAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGGGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACGAATGCATAATTGAGCGCCCCCCGACTATATCAGCCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCAAATTGATGTGGATACCTCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATGTTTATGTATATATACATCTAATTCGCGAATGCAAGGGAGCAATGTCATTTACAGAGAAGTGAATGGTGTATGTAATGGGTAAACAGAATGAGTATAAAGAGGTTGCAGTA]
consensusID : consensus_9776#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 239 fasta sequence
[GATGTGGTTTTAGAATTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGGATAAGAATGTTAAGAGCGACCAAAATGAAAGTGGTAGAGCCCGAGTACCCATGTTCCCTGTATATATACATCTAATTCGCGAATGCCTAGGGAGCCATGTCATTTACAGAGAATGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI813093 [GATGTGGTTTTAGAATTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGGATAAGAATGTTAAGAGCGACCAAAATGAAAGTGGTAGAGCCCGAGTACCCATGTTCCCTGTATATATACATCTAATTCGCGAATGCCTAGGGAGCCATGTCATTTACAGAGAATGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9776#0 GCGAAAAATTCCGCCGCCGCCGTTTCGTCGACCTCATCGGCGGCCATGCTGCTCCGCCTC 60
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ------------------------------------------------------------
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 CGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTACTCCCCTTCTCCCCCTTCAGG 120
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ------------------------------------------------------------
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 CGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCACCGC 180
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ------------------------------------------------------------
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 CTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGTCTCGACAAGTCTTGAG 240
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ------------------------------------------------------------
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCG 300
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ------------------------------------------------------------
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 TCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGG 360
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ------------------------------------------------------------
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 CAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGAT 420
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ------------------------------------------------------------
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTA 480
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ------------------------------------------------------------
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 AACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTAT 540
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ------------------------------------------------------------
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATG 600
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ------------------------------------------------------------
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGC 660
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ----------------------------------------TTCCTCGAGCACTGTTGGCC 20
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 ATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATT 720
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 TACTGGTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATT 80
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 TGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTC 780
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 TGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTC 140
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 ACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCA 840
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCA 200
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 CGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAG 900
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 CGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAG 260
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTAT 960
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 GTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTAT 320
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 TTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCA 1020
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 TTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCA 380
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 ACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAG 1080
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAG 440
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 ATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGAT 1140
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 ATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGAT 500
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCA 1200
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 GTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCA 560
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 CTTGTGAGAACACTACCAGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTT 1260
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 CTTGTGAGAACACTACCGGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTT 620
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTCATGACCAAGAAGTTTGAG 1320
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 GAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTTATGACCAAGAAGTTTGAG 680
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAG 1380
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 GGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAG 740
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTT 1440
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 GGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTT 800
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGG 1500
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 GAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGG 860
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAAT 1560
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 GAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAAT 920
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGG 1620
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 GCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGG 980
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACA 1680
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 GAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACA 1040
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 AAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAA 1740
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 AAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAA 1100
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGAC 1800
consensus_9776#2 ------------------------------------------------------------
consensus_9776#1 GAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGAC 1160
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 AAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGAT 1860
consensus_9776#2 -------------GAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGAT 47
consensus_9776#1 AAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGAT 1220
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 ATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAG 1920
consensus_9776#2 ATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAG 107
consensus_9776#1 ATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAG 1280
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAA 1980
consensus_9776#2 GAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAA 167
consensus_9776#1 GAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAA 1340
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGC 2040
consensus_9776#2 GCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGC 227
consensus_9776#1 GCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGC 1400
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATG 2100
consensus_9776#2 GGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGGGCAACCGTCGCATG 287
consensus_9776#1 GGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATG 1460
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCT 2160
consensus_9776#2 GCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCT 347
consensus_9776#1 GCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCT 1520
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 TCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATAT 2220
consensus_9776#2 TCAGACGAAGTGGTTCATGCCAGTGCCACGAATGCATAATTGAGCGCCCCCCGACTATAT 407
consensus_9776#1 TCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATAT 1580
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 CAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGAT 2280
consensus_9776#2 CAGCCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGAT 467
consensus_9776#1 CAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGAT 1640
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 AATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCA----------------TCAA 2324
consensus_9776#2 AATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCAAATTGATGTGGATACCTCAA 527
consensus_9776#1 AATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCA----------------TCAA 1684
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 GGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCC 2384
consensus_9776#2 GGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCT--GTCAGTTATGGTGTTTCTCC 585
consensus_9776#1 GGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCC 1744
consensus_9776#3 ------------------------------------------------------------
consensus_9776#0 CCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTAC 2444
consensus_9776#2 CCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTAC 645
consensus_9776#1 CCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTAC 1804
consensus_9776#3 -------------------GATGTGGTTTTAGAAT-TCGGATCGTATTGGTAGGATTTAC 40
**************** ************************
consensus_9776#0 TATATCTTTATAGTGG-ATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCA-G 2502
consensus_9776#2 TATATCTTTATAGTGG-ATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCA-G 703
consensus_9776#1 TATATCTTTATAGTGG-ATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCA-G 1862
consensus_9776#3 TATATCTTTATAGTGGGATAAGAATGTTAAGAGCGACCAAAATGAAAGTGGTAGAGCCCG 100
**************** ********** ********* ******************* *
consensus_9776#0 AGTAGCAATGTTTA-TGTATATATACATCTAATTCGCGAATGCA-AGGGAGCAATGTCAT 2560
consensus_9776#2 AGTAGCAATGTTTA-TGTATATATACATCTAATTCGCGAATGCA-AGGGAGCAATGTCAT 761
consensus_9776#1 AGTAGCAATGTTTA-TGTATATATACATCTAATTCGCGAATGCA-AGGGAGCAATGTCAT 1920
consensus_9776#3 AGTACCCATGTTCCCTGTATATATACATCTAATTCGCGAATGCCTAGGGAGCCATGTCAT 160
**** * ***** **************************** ******* *******
consensus_9776#0 TTACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAG 2620
consensus_9776#2 TTACAGAGAAGTGAATGGTGTATGTAATGGGTAAACAGAATGAGTATAAAGAGGTTGCAG 821
consensus_9776#1 TTACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAG 1980
consensus_9776#3 TTACAGAGAA-TGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAG 219
********** ***************** ******************************
consensus_9776#0 TATCACTGTGTCCTATCACAGAAGAGGTTGCAGTG------------------------- 2655
consensus_9776#2 TA---------------------------------------------------------- 823
consensus_9776#1 TATCACTGTGTCCTATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACA 2040
consensus_9776#3 TAAAAAAAAAAAAAAAAAAA---------------------------------------- 239
**
consensus_9776#0 -
consensus_9776#2 -
consensus_9776#1 T 2041
consensus_9776#3 -
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||