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Oryza sativa
cluster # 9781 cluster # 9781       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9781#0 length = 1843 sequences # 1  
consensus_9781#1 length = 1776 sequences # 1  
consensus_9781#2 length = 1739 sequences # 1  
consensus_9781#3 length = 801 sequences # 2  
consensus_9781#4 length = 207 sequences # 1  

consensusID : consensus_9781#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1843
fasta sequence
                              [CCGTCCTCGATTCGCCAAAAAAGCAAGTCCCCAATCTCTCCGCAACCTGTTCGACGGAATGCAGCAGGGAGCGGCGGGGCAGGCTGGGCCGTCGGGTGGTGGTGGAGGCGGTGGCGGTGGCGGTGGCGGTGGCGCGGACCGCCTCAGCGCGCTCCCGGACGCGGTGCTCTTCCGGATCGTGTCGCACCTGGGGGCGCGGCAGGCGGTGCGCACGAGCGTGCTATCCAAGCGGTGGCGCCACGTGTGGGCGTCCGCGCCGCGCGTCGACGTCCGCCACCCCTGCGCCTGCGACGAGAGCGCCGACCAGGAGAGGTTCCACGGCTTCGTCACCACCATGCTCCTCAGGCGCCGCCCGTTCGCCCCCATCAAGGCGCTCCGGCTGTGCTGGAGCCACGACGGCGACGCCAACAACTGGATCGCTCATGCTGTCAGGCGTGGGGCCGAAGAAATCGATTTCTCCGCGAGGCATCACCAAGATGATCCGAAACCGGAGCTAGAGTACACGAGCTTCATTTCTCACAAGATCAAGATCTTGAAGCTGACGCGTGTCCGGATGGGCATCAAGTTTATCACGCAGATCTGCTATAGGTGCACTTTTTTGGAAGAATTAGAGCTCAAGAATGTTAATTCACTTGAAGGGCAGATTCAATCGACCTCGCTGAAGCGCTTGTCTATCATCAACTGCCTTATCTCTGATGGATTTTTGGTTGATGCTCCGAACCTTATCTCGCTCTGCTTCTTCAGACCTCTCAGCGGTAAGAGCACGGAGGGAGCCAATCACTCGTCTGATAATAGGAGTTGGCCATTCTCAGCGTCAGTGTGGGAGTTTGATGACGATGGATCTGATCATGATGATGATTTCTTTGCAATTGCTAGTGGTGGTGAACACTTTGATGATAAGAGAGACAATGAATCTGATCAAGACAATGGTTCTAGTGATGAAGACTCAGATGATAAGAGAGACCAAGAATCTGATCATGATGAAGATGTTCCCTCTTCCCCATATTCTGATTCTAAGGACTCCTGTGATGGCAGTGACAGTGATGCGAGTCTTATGAATCCAGTGATAAGGAGGGTGATGATCTTGAAGATTGCGACAGCAATGATATGTTGGAAAACTTGATCAAGGTAGCTAGGGGCTTGACAGCTTATCATGGAGAGGTGCTTCTGAGGAGGCAATTGGAAAATTTCCCCATGTTCAATAACCTGAAAACTCTGTCCCTTGGTGAATGGTGTATGGTTCCTGACTTCAGTGCTTTGTCAACCATACTTAAGAAATCACCTAAGGTAGAAAGGCTTTATCTTCACCTTGACATGATCCACAGAGGAAGAGGGGACATCGATCCAAGTGGAGGATCATTTGCTTGCAACAACCTGAGGAAGGTTAAGATCACATGTTGTAAAGATGATGAAATGGTCCATATGCTGAAACAATTCCTCCAACGTAACGGCATATCACTTGAGAAGATTGTTCATCACACTTCTAGCACTCATAATGGCGAAGAAGACGGAGGCGGGGACTCCAGTGCGAAACGGAAGGCGCAAGGCGAAGTTGCGAGGCTAGCAGTGAAACAGAGGAGGGCGCGAAACAGTAGAAGCCCGGAGTGAGGGGAACATGTTTAAAATGCTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAGCAGTAGAATTCTTCACAGGATGTGTATATGCATCAAATCTAGTACAGGTACTTTGGGGACATGAAAAATTATGCATCCGTTGGTGTTGCATGAAAATAGATCGTTGGTCAATGTTCAGTGACTTGGAATCCTGTGAATTGCTATATGCCTATATCATGTTTGATGTATTGAGTAGTAATT]

[+] EMBL AK109710             [CCGTCCTCGATTCGCCAAAAAAGCAAGTCCCCAATCTCTCCGCAACCTGTTCGACGGAATGCAGCAGGGAGCGGCGGGGCAGGCTGGGCCGTCGGGTGGTGGTGGAGGCGGTGGCGGTGGCGGTGGCGGTGGCGCGGACCGCCTCAGCGCGCTCCCGGACGCGGTGCTCTTCCGGATCGTGTCGCACCTGGGGGCGCGGCAGGCGGTGCGCACGAGCGTGCTATCCAAGCGGTGGCGCCACGTGTGGGCGTCCGCGCCGCGCGTCGACGTCCGCCACCCCTGCGCCTGCGACGAGAGCGCCGACCAGGAGAGGTTCCACGGCTTCGTCACCACCATGCTCCTCAGGCGCCGCCCGTTCGCCCCCATCAAGGCGCTCCGGCTGTGCTGGAGCCACGACGGCGACGCCAACAACTGGATCGCTCATGCTGTCAGGCGTGGGGCCGAAGAAATCGATTTCTCCGCGAGGCATCACCAAGATGATCCGAAACCGGAGCTAGAGTACACGAGCTTCATTTCTCACAAGATCAAGATCTTGAAGCTGACGCGTGTCCGGATGGGCATCAAGTTTATCACGCAGATCTGCTATAGGTGCACTTTTTTGGAAGAATTAGAGCTCAAGAATGTTAATTCACTTGAAGGGCAGATTCAATCGACCTCGCTGAAGCGCTTGTCTATCATCAACTGCCTTATCTCTGATGGATTTTTGGTTGATGCTCCGAACCTTATCTCGCTCTGCTTCTTCAGACCTCTCAGCGGTAAGAGCACGGAGGGAGCCAATCACTCGTCTGATAATAGGAGTTGGCCATTCTCAGCGTCAGTGTGGGAGTTTGATGACGATGGATCTGATCATGATGATGATTTCTTTGCAATTGCTAGTGGTGGTGAACACTTTGATGATAAGAGAGACAATGAATCTGATCAAGACAATGGTTCTAGTGATGAAGACTCAGATGATAAGAGAGACCAAGAATCTGATCATGATGAAGATGTTCCCTCTTCCCCATATTCTGATTCTAAGGACTCCTGTGATGGCAGTGACAGTGATGCGAGTCTTATGAATCCAGTGATAAGGAGGGTGATGATCTTGAAGATTGCGACAGCAATGATATGTTGGAAAACTTGATCAAGGTAGCTAGGGGCTTGACAGCTTATCATGGAGAGGTGCTTCTGAGGAGGCAATTGGAAAATTTCCCCATGTTCAATAACCTGAAAACTCTGTCCCTTGGTGAATGGTGTATGGTTCCTGACTTCAGTGCTTTGTCAACCATACTTAAGAAATCACCTAAGGTAGAAAGGCTTTATCTTCACCTTGACATGATCCACAGAGGAAGAGGGGACATCGATCCAAGTGGAGGATCATTTGCTTGCAACAACCTGAGGAAGGTTAAGATCACATGTTGTAAAGATGATGAAATGGTCCATATGCTGAAACAATTCCTCCAACGTAACGGCATATCACTTGAGAAGATTGTTCATCACACTTCTAGCACTCATAATGGCGAAGAAGACGGAGGCGGGGACTCCAGTGCGAAACGGAAGGCGCAAGGCGAAGTTGCGAGGCTAGCAGTGAAACAGAGGAGGGCGCGAAACAGTAGAAGCCCGGAGTGAGGGGAACATGTTTAAAATGCTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAGCAGTAGAATTCTTCACAGGATGTGTATATGCATCAAATCTAGTACAGGTACTTTGGGGACATGAAAAATTATGCATCCGTTGGTGTTGCATGAAAATAGATCGTTGGTCAATGTTCAGTGACTTGGAATCCTGTGAATTGCTATATGCCTATATCATGTTTGATGTATTGAGTAGTAATT]


>consensus_9781#0 CCGTCCTCGATTCGCCAAAAAAGCAAGTCCCCAATCTCTCCGCAACCTGTTCGACGGAAT GCAGCAGGGAGCGGCGGGGCAGGCTGGGCCGTCGGGTGGTGGTGGAGGCGGTGGCGGTGG CGGTGGCGGTGGCGCGGACCGCCTCAGCGCGCTCCCGGACGCGGTGCTCTTCCGGATCGT GTCGCACCTGGGGGCGCGGCAGGCGGTGCGCACGAGCGTGCTATCCAAGCGGTGGCGCCA CGTGTGGGCGTCCGCGCCGCGCGTCGACGTCCGCCACCCCTGCGCCTGCGACGAGAGCGC CGACCAGGAGAGGTTCCACGGCTTCGTCACCACCATGCTCCTCAGGCGCCGCCCGTTCGC CCCCATCAAGGCGCTCCGGCTGTGCTGGAGCCACGACGGCGACGCCAACAACTGGATCGC TCATGCTGTCAGGCGTGGGGCCGAAGAAATCGATTTCTCCGCGAGGCATCACCAAGATGA TCCGAAACCGGAGCTAGAGTACACGAGCTTCATTTCTCACAAGATCAAGATCTTGAAGCT GACGCGTGTCCGGATGGGCATCAAGTTTATCACGCAGATCTGCTATAGGTGCACTTTTTT GGAAGAATTAGAGCTCAAGAATGTTAATTCACTTGAAGGGCAGATTCAATCGACCTCGCT GAAGCGCTTGTCTATCATCAACTGCCTTATCTCTGATGGATTTTTGGTTGATGCTCCGAA CCTTATCTCGCTCTGCTTCTTCAGACCTCTCAGCGGTAAGAGCACGGAGGGAGCCAATCA CTCGTCTGATAATAGGAGTTGGCCATTCTCAGCGTCAGTGTGGGAGTTTGATGACGATGG ATCTGATCATGATGATGATTTCTTTGCAATTGCTAGTGGTGGTGAACACTTTGATGATAA GAGAGACAATGAATCTGATCAAGACAATGGTTCTAGTGATGAAGACTCAGATGATAAGAG AGACCAAGAATCTGATCATGATGAAGATGTTCCCTCTTCCCCATATTCTGATTCTAAGGA CTCCTGTGATGGCAGTGACAGTGATGCGAGTCTTATGAATCCAGTGATAAGGAGGGTGAT GATCTTGAAGATTGCGACAGCAATGATATGTTGGAAAACTTGATCAAGGTAGCTAGGGGC TTGACAGCTTATCATGGAGAGGTGCTTCTGAGGAGGCAATTGGAAAATTTCCCCATGTTC AATAACCTGAAAACTCTGTCCCTTGGTGAATGGTGTATGGTTCCTGACTTCAGTGCTTTG TCAACCATACTTAAGAAATCACCTAAGGTAGAAAGGCTTTATCTTCACCTTGACATGATC CACAGAGGAAGAGGGGACATCGATCCAAGTGGAGGATCATTTGCTTGCAACAACCTGAGG AAGGTTAAGATCACATGTTGTAAAGATGATGAAATGGTCCATATGCTGAAACAATTCCTC CAACGTAACGGCATATCACTTGAGAAGATTGTTCATCACACTTCTAGCACTCATAATGGC GAAGAAGACGGAGGCGGGGACTCCAGTGCGAAACGGAAGGCGCAAGGCGAAGTTGCGAGG CTAGCAGTGAAACAGAGGAGGGCGCGAAACAGTAGAAGCCCGGAGTGAGGGGAACATGTT TAAAATGCTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAGCAGTAGAATTCTTCACA GGATGTGTATATGCATCAAATCTAGTACAGGTACTTTGGGGACATGAAAAATTATGCATC CGTTGGTGTTGCATGAAAATAGATCGTTGGTCAATGTTCAGTGACTTGGAATCCTGTGAA TTGCTATATGCCTATATCATGTTTGATGTATTGAGTAGTAATT



consensusID : consensus_9781#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1776
fasta sequence
                              [GTTCTACCACCTGCTGGTGCTCCAAAGTTGAAAGTCGAAAGCAGCGAGAGCTCTTGGCGCCCATCGATTCGCCAAGAAATCCCCAATCTCTCCGCAACCCGTTCGACGGAATGCAGCAGGGAGCCGCGGGGCAGGCGCCGCGGCGCGACGACGGGGAGGCGGCGGGGCCTTCCGGTGGTGGCGGGGGCGGTGGTGAGGACCGCCTCAGCGCGCTCCCGGACGCGGTGCTCGGCAGGATCGTGTCGCACCTGAAGGCGTGGCAGGCGGTGCGCACGAGCGTGCTCTCCAAGCGGTGGCGCGACGTGTGGGCGTCCGCGCCGCGCGTCGACATCCGCCACCCCTGCGCCTGCAACGAGCGCGCCGACCAGGAGAGGTTCCACGGCTTCGTCGACACCCTGCTCCTCAGGCGCCGCCCGTTCGCTCCCATCAAGGCGCTCCGGCTGTGCTGGAGCCACGACGGCGACGCCAACAACTGGATCGTTCATGCCGTCAGGCGCGGGGCCGAAGAAATCGAACTCTCCACGAGGCATCACCAAGGTTCTCTGGAACCGGAGCCGGAGTTCACGAGCTTCATTTCTCCCAAGATCAAGATCTTGAAGCTGATGCGTGTCGGCATGGACATCAGGTCTATCACGCAAATCTGCTCTAGGTGCACTTCTTTGGAAGAATTAGAGCTCGAGGATGTTCGCCTACTTGAAGGGCAGATTCAATCGGCCTCGCTGAAGCGCTTGTCTATCATCAAATGCTATATCGATGATGGCTTTTTGGTTGATGCTCCGAACCTTGTCTCGCTCTGCTTCATCAGACCTCTCGGCATTGAGAGAAAGGGGGGATCCAATTCCTCGTCTGATAGACTTTGGTGGCCAGTGTGGCTGAATGACGACGATGGATATGATCATGATGATGATTTCTTTGCAAATGCTAGTGCTGTACAATCTGACGATAAGAGAGGCAGTAAATCTGATCAAGATGATCTTGAAGGTTGCAATGATGATGATTGTACTGTGGCCTATGATGAGATTGCAGATGAGTACTCCAGTAATGGTGGTCCTGGTGATGAACATGGAGGATATTCTGAGAGCGATGATTCTACAATTTGTGGTCCCTATGGTTTATTTAATGTTCTTGTAAAGACATCTCTGATCATGATAGCCCGGGAAGGAGAGCTGCTTCTGAGGAGGGAATTGGAAAATTTCCCCATGTTCATTAACCTGAATACTCTGTCCCTTGGTGAATGGTGTATGGTTCCTGACTTCAGTGCTTTGTCAACCATACTTGAGAAATCACCTAATGTAGAAAGGCTTTATATTCACCTTGACATGGTCCACAGAGGAAGAGGGGACATCGATCCAAGTGGAGGATCATTTGCTTGCAACAACCTGAAGAGGGTTAAGATCACATGTTGTGAAGATGATGTAATGGTCCATAAGCTGGCGGAATTCCTCGAAGCTAACGGCCTACAGCGTCAGAGGATTTTTGTTCGTCGCACATCCAGAACTCGTAGAGACTCCAGGGCGAAACAGAAAGAGCAAGAGGATCATTTGAGGCTCGCAAAGAAGTGGTGAACGGTGTGAAATAGTAGAAGCCTGGAGTGAGGGAAAGGTGCCTAAAATGCCGAAAGCCGGTGCGGGCGTTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAACACTAGGATTGTCTACTGGATGTGTATATGCATCAGTTTTAGTACAGGTACCTGGGTATGTGCAAGACTTTGCATTCGTTGGTGTTGCATGAAAATAGATGGCTGAT]

[+] EMBL AK106882             [GTTCTACCACCTGCTGGTGCTCCAAAGTTGAAAGTCGAAAGCAGCGAGAGCTCTTGGCGCCCATCGATTCGCCAAGAAATCCCCAATCTCTCCGCAACCCGTTCGACGGAATGCAGCAGGGAGCCGCGGGGCAGGCGCCGCGGCGCGACGACGGGGAGGCGGCGGGGCCTTCCGGTGGTGGCGGGGGCGGTGGTGAGGACCGCCTCAGCGCGCTCCCGGACGCGGTGCTCGGCAGGATCGTGTCGCACCTGAAGGCGTGGCAGGCGGTGCGCACGAGCGTGCTCTCCAAGCGGTGGCGCGACGTGTGGGCGTCCGCGCCGCGCGTCGACATCCGCCACCCCTGCGCCTGCAACGAGCGCGCCGACCAGGAGAGGTTCCACGGCTTCGTCGACACCCTGCTCCTCAGGCGCCGCCCGTTCGCTCCCATCAAGGCGCTCCGGCTGTGCTGGAGCCACGACGGCGACGCCAACAACTGGATCGTTCATGCCGTCAGGCGCGGGGCCGAAGAAATCGAACTCTCCACGAGGCATCACCAAGGTTCTCTGGAACCGGAGCCGGAGTTCACGAGCTTCATTTCTCCCAAGATCAAGATCTTGAAGCTGATGCGTGTCGGCATGGACATCAGGTCTATCACGCAAATCTGCTCTAGGTGCACTTCTTTGGAAGAATTAGAGCTCGAGGATGTTCGCCTACTTGAAGGGCAGATTCAATCGGCCTCGCTGAAGCGCTTGTCTATCATCAAATGCTATATCGATGATGGCTTTTTGGTTGATGCTCCGAACCTTGTCTCGCTCTGCTTCATCAGACCTCTCGGCATTGAGAGAAAGGGGGGATCCAATTCCTCGTCTGATAGACTTTGGTGGCCAGTGTGGCTGAATGACGACGATGGATATGATCATGATGATGATTTCTTTGCAAATGCTAGTGCTGTACAATCTGACGATAAGAGAGGCAGTAAATCTGATCAAGATGATCTTGAAGGTTGCAATGATGATGATTGTACTGTGGCCTATGATGAGATTGCAGATGAGTACTCCAGTAATGGTGGTCCTGGTGATGAACATGGAGGATATTCTGAGAGCGATGATTCTACAATTTGTGGTCCCTATGGTTTATTTAATGTTCTTGTAAAGACATCTCTGATCATGATAGCCCGGGAAGGAGAGCTGCTTCTGAGGAGGGAATTGGAAAATTTCCCCATGTTCATTAACCTGAATACTCTGTCCCTTGGTGAATGGTGTATGGTTCCTGACTTCAGTGCTTTGTCAACCATACTTGAGAAATCACCTAATGTAGAAAGGCTTTATATTCACCTTGACATGGTCCACAGAGGAAGAGGGGACATCGATCCAAGTGGAGGATCATTTGCTTGCAACAACCTGAAGAGGGTTAAGATCACATGTTGTGAAGATGATGTAATGGTCCATAAGCTGGCGGAATTCCTCGAAGCTAACGGCCTACAGCGTCAGAGGATTTTTGTTCGTCGCACATCCAGAACTCGTAGAGACTCCAGGGCGAAACAGAAAGAGCAAGAGGATCATTTGAGGCTCGCAAAGAAGTGGTGAACGGTGTGAAATAGTAGAAGCCTGGAGTGAGGGAAAGGTGCCTAAAATGCCGAAAGCCGGTGCGGGCGTTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAACACTAGGATTGTCTACTGGATGTGTATATGCATCAGTTTTAGTACAGGTACCTGGGTATGTGCAAGACTTTGCATTCGTTGGTGTTGCATGAAAATAGATGGCTGAT]


>consensus_9781#1 GTTCTACCACCTGCTGGTGCTCCAAAGTTGAAAGTCGAAAGCAGCGAGAGCTCTTGGCGC CCATCGATTCGCCAAGAAATCCCCAATCTCTCCGCAACCCGTTCGACGGAATGCAGCAGG GAGCCGCGGGGCAGGCGCCGCGGCGCGACGACGGGGAGGCGGCGGGGCCTTCCGGTGGTG GCGGGGGCGGTGGTGAGGACCGCCTCAGCGCGCTCCCGGACGCGGTGCTCGGCAGGATCG TGTCGCACCTGAAGGCGTGGCAGGCGGTGCGCACGAGCGTGCTCTCCAAGCGGTGGCGCG ACGTGTGGGCGTCCGCGCCGCGCGTCGACATCCGCCACCCCTGCGCCTGCAACGAGCGCG CCGACCAGGAGAGGTTCCACGGCTTCGTCGACACCCTGCTCCTCAGGCGCCGCCCGTTCG CTCCCATCAAGGCGCTCCGGCTGTGCTGGAGCCACGACGGCGACGCCAACAACTGGATCG TTCATGCCGTCAGGCGCGGGGCCGAAGAAATCGAACTCTCCACGAGGCATCACCAAGGTT CTCTGGAACCGGAGCCGGAGTTCACGAGCTTCATTTCTCCCAAGATCAAGATCTTGAAGC TGATGCGTGTCGGCATGGACATCAGGTCTATCACGCAAATCTGCTCTAGGTGCACTTCTT TGGAAGAATTAGAGCTCGAGGATGTTCGCCTACTTGAAGGGCAGATTCAATCGGCCTCGC TGAAGCGCTTGTCTATCATCAAATGCTATATCGATGATGGCTTTTTGGTTGATGCTCCGA ACCTTGTCTCGCTCTGCTTCATCAGACCTCTCGGCATTGAGAGAAAGGGGGGATCCAATT CCTCGTCTGATAGACTTTGGTGGCCAGTGTGGCTGAATGACGACGATGGATATGATCATG ATGATGATTTCTTTGCAAATGCTAGTGCTGTACAATCTGACGATAAGAGAGGCAGTAAAT CTGATCAAGATGATCTTGAAGGTTGCAATGATGATGATTGTACTGTGGCCTATGATGAGA TTGCAGATGAGTACTCCAGTAATGGTGGTCCTGGTGATGAACATGGAGGATATTCTGAGA GCGATGATTCTACAATTTGTGGTCCCTATGGTTTATTTAATGTTCTTGTAAAGACATCTC TGATCATGATAGCCCGGGAAGGAGAGCTGCTTCTGAGGAGGGAATTGGAAAATTTCCCCA TGTTCATTAACCTGAATACTCTGTCCCTTGGTGAATGGTGTATGGTTCCTGACTTCAGTG CTTTGTCAACCATACTTGAGAAATCACCTAATGTAGAAAGGCTTTATATTCACCTTGACA TGGTCCACAGAGGAAGAGGGGACATCGATCCAAGTGGAGGATCATTTGCTTGCAACAACC TGAAGAGGGTTAAGATCACATGTTGTGAAGATGATGTAATGGTCCATAAGCTGGCGGAAT TCCTCGAAGCTAACGGCCTACAGCGTCAGAGGATTTTTGTTCGTCGCACATCCAGAACTC GTAGAGACTCCAGGGCGAAACAGAAAGAGCAAGAGGATCATTTGAGGCTCGCAAAGAAGT GGTGAACGGTGTGAAATAGTAGAAGCCTGGAGTGAGGGAAAGGTGCCTAAAATGCCGAAA GCCGGTGCGGGCGTTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAACACTAGGATTG TCTACTGGATGTGTATATGCATCAGTTTTAGTACAGGTACCTGGGTATGTGCAAGACTTT GCATTCGTTGGTGTTGCATGAAAATAGATGGCTGAT



consensusID : consensus_9781#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1739
fasta sequence
                              [CGAAGCGCGAAGCCGTTCTATCGAAACTCGAAAGCAGCGAGAGCTCTTGGCGCGACCCATCGATTTCGCCAAGAAATCCCCCAATCTCTCCGCGAACTGTTCGACGGAATGCACCAGGGAGCGGCGGGACCTGGCCCATCCGGCGGTGGCGGCGACCGTCTCAGCGCCCTCCCGGACGCGGTGCTGTTCCGGATCGTGTCGCACCTGAAGGCGCGGGAGGCGGTGCGCACGAGCGGGCTCTCCAGGCGGTGGCGCCACGTGTGGGCGTCCGCGCCGCGCGTCGACGTCCGCTACCCGTGCGCCTGCGACGGCCGCGCCGTCGACCAGAAGAGCTTCCGCGACTTCGTCACCATCCTGCTCCTCAGGCGCCGCCCGCTCGCCCCCTTCAAGGCGCTCCGGCTGAGCTGGAGCCACGACGAGGACGACGTGAGCGCGTGGATCGCTCACGCCGTCAGGCGCGGGGCCGAAGAAATCGATCTCTCCGCGAGGCGTCACCATGGCTACCCGGTGCCGGATTACAAACACTTCATTTCTCCCAAGATCAAGATCTTGAAGCTGACGCATCTCGGGACGACGAGGTTCACGGCCGACAACACCCTCGACCTGCTCTGCTCTGGCTGCACTTCTTTGGAAGAACTGGAGCTCAAGGATATCAAATCACTCTGGGGGGGAATTCAATCAGACTCGCTGAAGCGCTTGTCGATCATCAACTGCCATGTGACATCCGATGGCTTCCTGGTTGAAGCTCCCAATCTTATATCGCTCTGCTGCATCAGACCTGCCCGAGCTGTTCCTTGGTTCAGCCACATGGTGTCGCTGGTGGAAGCCACTGTCGTGCTTGATGATTCTCGCTTGAGTGATGACTATCAGCAGCCAGTGTTGGAGGATGACAACGATGGGTCTGATTATGATGATAATTTCTTTGCACCTAAAGCTGAGGGCCCTGATGATAAGAGAGACAATGAAGCTGATAATGACTCTGGTGATAAGAGAAATAGGGACGGTAGTAAATCTGATCTTGATGATCATGATGGTGAATATGATCATGAGGATGGTTCTGAGTCTGGTGATAAAGAGGTTGATGATCTTGAAGGTGGCGATGATCGAACTGTGACCTATGGTGAGATTGCAGATGAGTCTTCCAGTTATGGTATTCCCATTCCCAGTGATGAATATGGCGGAAACTATGGGAACCATGATTATACTATTTTCGGTGGTGATCATATGCTTGACCACTTGTCAGATGTTAGAACTTTGGGTCTGTTAGGCCATCAAGGAGAGGACATCCACAGAAGCAGAGGGGGCATCAACCCAACGGGAGGATCATTTGCTTGCAACAACCTGAAGAAGGTTAAGATCACATGCCGTAAAGATGATGTAATGGTCCATATGCTGGCAAAATTCCTCCAACGTAACGGCATATCGCTTCAGAAGATTTTTGTTCGTCGCACTTCCAGCACTCATAATGGCGAGGAAGGCACGGGCAAGGACTCCAGTGCAAAACGGAAGGCGCAAGACGAAGCTGCGAGGCGAGCAGTGAAACAGCTGAGGAGGGCACGAAACAGTAGAAGCCCAGAGTGAGGGAAAGGTGTTTAAAATGCTGAAAACCGGTATGGATGTTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAACAGTAGGATTGTCTACTGAATGTGTAACTATATGCACAGTGTTAGTACAGTTACCTGGATATATGAAAAATTTTGCATTCGTTG]

[+] EMBL AK110883             [CGAAGCGCGAAGCCGTTCTATCGAAACTCGAAAGCAGCGAGAGCTCTTGGCGCGACCCATCGATTTCGCCAAGAAATCCCCCAATCTCTCCGCGAACTGTTCGACGGAATGCACCAGGGAGCGGCGGGACCTGGCCCATCCGGCGGTGGCGGCGACCGTCTCAGCGCCCTCCCGGACGCGGTGCTGTTCCGGATCGTGTCGCACCTGAAGGCGCGGGAGGCGGTGCGCACGAGCGGGCTCTCCAGGCGGTGGCGCCACGTGTGGGCGTCCGCGCCGCGCGTCGACGTCCGCTACCCGTGCGCCTGCGACGGCCGCGCCGTCGACCAGAAGAGCTTCCGCGACTTCGTCACCATCCTGCTCCTCAGGCGCCGCCCGCTCGCCCCCTTCAAGGCGCTCCGGCTGAGCTGGAGCCACGACGAGGACGACGTGAGCGCGTGGATCGCTCACGCCGTCAGGCGCGGGGCCGAAGAAATCGATCTCTCCGCGAGGCGTCACCATGGCTACCCGGTGCCGGATTACAAACACTTCATTTCTCCCAAGATCAAGATCTTGAAGCTGACGCATCTCGGGACGACGAGGTTCACGGCCGACAACACCCTCGACCTGCTCTGCTCTGGCTGCACTTCTTTGGAAGAACTGGAGCTCAAGGATATCAAATCACTCTGGGGGGGAATTCAATCAGACTCGCTGAAGCGCTTGTCGATCATCAACTGCCATGTGACATCCGATGGCTTCCTGGTTGAAGCTCCCAATCTTATATCGCTCTGCTGCATCAGACCTGCCCGAGCTGTTCCTTGGTTCAGCCACATGGTGTCGCTGGTGGAAGCCACTGTCGTGCTTGATGATTCTCGCTTGAGTGATGACTATCAGCAGCCAGTGTTGGAGGATGACAACGATGGGTCTGATTATGATGATAATTTCTTTGCACCTAAAGCTGAGGGCCCTGATGATAAGAGAGACAATGAAGCTGATAATGACTCTGGTGATAAGAGAAATAGGGACGGTAGTAAATCTGATCTTGATGATCATGATGGTGAATATGATCATGAGGATGGTTCTGAGTCTGGTGATAAAGAGGTTGATGATCTTGAAGGTGGCGATGATCGAACTGTGACCTATGGTGAGATTGCAGATGAGTCTTCCAGTTATGGTATTCCCATTCCCAGTGATGAATATGGCGGAAACTATGGGAACCATGATTATACTATTTTCGGTGGTGATCATATGCTTGACCACTTGTCAGATGTTAGAACTTTGGGTCTGTTAGGCCATCAAGGAGAGGACATCCACAGAAGCAGAGGGGGCATCAACCCAACGGGAGGATCATTTGCTTGCAACAACCTGAAGAAGGTTAAGATCACATGCCGTAAAGATGATGTAATGGTCCATATGCTGGCAAAATTCCTCCAACGTAACGGCATATCGCTTCAGAAGATTTTTGTTCGTCGCACTTCCAGCACTCATAATGGCGAGGAAGGCACGGGCAAGGACTCCAGTGCAAAACGGAAGGCGCAAGACGAAGCTGCGAGGCGAGCAGTGAAACAGCTGAGGAGGGCACGAAACAGTAGAAGCCCAGAGTGAGGGAAAGGTGTTTAAAATGCTGAAAACCGGTATGGATGTTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAACAGTAGGATTGTCTACTGAATGTGTAACTATATGCACAGTGTTAGTACAGTTACCTGGATATATGAAAAATTTTGCATTCGTTG]


>consensus_9781#2 CGAAGCGCGAAGCCGTTCTATCGAAACTCGAAAGCAGCGAGAGCTCTTGGCGCGACCCAT CGATTTCGCCAAGAAATCCCCCAATCTCTCCGCGAACTGTTCGACGGAATGCACCAGGGA GCGGCGGGACCTGGCCCATCCGGCGGTGGCGGCGACCGTCTCAGCGCCCTCCCGGACGCG GTGCTGTTCCGGATCGTGTCGCACCTGAAGGCGCGGGAGGCGGTGCGCACGAGCGGGCTC TCCAGGCGGTGGCGCCACGTGTGGGCGTCCGCGCCGCGCGTCGACGTCCGCTACCCGTGC GCCTGCGACGGCCGCGCCGTCGACCAGAAGAGCTTCCGCGACTTCGTCACCATCCTGCTC CTCAGGCGCCGCCCGCTCGCCCCCTTCAAGGCGCTCCGGCTGAGCTGGAGCCACGACGAG GACGACGTGAGCGCGTGGATCGCTCACGCCGTCAGGCGCGGGGCCGAAGAAATCGATCTC TCCGCGAGGCGTCACCATGGCTACCCGGTGCCGGATTACAAACACTTCATTTCTCCCAAG ATCAAGATCTTGAAGCTGACGCATCTCGGGACGACGAGGTTCACGGCCGACAACACCCTC GACCTGCTCTGCTCTGGCTGCACTTCTTTGGAAGAACTGGAGCTCAAGGATATCAAATCA CTCTGGGGGGGAATTCAATCAGACTCGCTGAAGCGCTTGTCGATCATCAACTGCCATGTG ACATCCGATGGCTTCCTGGTTGAAGCTCCCAATCTTATATCGCTCTGCTGCATCAGACCT GCCCGAGCTGTTCCTTGGTTCAGCCACATGGTGTCGCTGGTGGAAGCCACTGTCGTGCTT GATGATTCTCGCTTGAGTGATGACTATCAGCAGCCAGTGTTGGAGGATGACAACGATGGG TCTGATTATGATGATAATTTCTTTGCACCTAAAGCTGAGGGCCCTGATGATAAGAGAGAC AATGAAGCTGATAATGACTCTGGTGATAAGAGAAATAGGGACGGTAGTAAATCTGATCTT GATGATCATGATGGTGAATATGATCATGAGGATGGTTCTGAGTCTGGTGATAAAGAGGTT GATGATCTTGAAGGTGGCGATGATCGAACTGTGACCTATGGTGAGATTGCAGATGAGTCT TCCAGTTATGGTATTCCCATTCCCAGTGATGAATATGGCGGAAACTATGGGAACCATGAT TATACTATTTTCGGTGGTGATCATATGCTTGACCACTTGTCAGATGTTAGAACTTTGGGT CTGTTAGGCCATCAAGGAGAGGACATCCACAGAAGCAGAGGGGGCATCAACCCAACGGGA GGATCATTTGCTTGCAACAACCTGAAGAAGGTTAAGATCACATGCCGTAAAGATGATGTA ATGGTCCATATGCTGGCAAAATTCCTCCAACGTAACGGCATATCGCTTCAGAAGATTTTT GTTCGTCGCACTTCCAGCACTCATAATGGCGAGGAAGGCACGGGCAAGGACTCCAGTGCA AAACGGAAGGCGCAAGACGAAGCTGCGAGGCGAGCAGTGAAACAGCTGAGGAGGGCACGA AACAGTAGAAGCCCAGAGTGAGGGAAAGGTGTTTAAAATGCTGAAAACCGGTATGGATGT TGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAACAGTAGGATTGTCTACTGAATGTGT AACTATATGCACAGTGTTAGTACAGTTACCTGGATATATGAAAAATTTTGCATTCGTTG



consensusID : consensus_9781#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 801
fasta sequence
                              [TGCTTCTGAGGAGGCTATTGGAAAATTTCCCCATGTTTAATAACCTGGATACTCTGTCCCTTGGTGAATGGTGTATGGTTCCTGACTTCAGTGCTTTGTCAACCATACTTACGAAATCACCAAATGTAAAAAGGCTTTATCTTCACCTTGACGTGATTCACAGAAGAAGAAGGTGCATCGATCCCAGTGGAGGATCATTTTCTTGCAACAACCTGGAGAAGGTTAAGATCACATGTTGTAAAGATGATGTAATGGTCCATATGCTGGCTCCATTCCTCCAAGATAACGGTGTATCGCCTGAGAAGATTTTTGTTTGTCGCACTTCCAGCCCACATAATGGCAAGGAAGGCAGGGGTAGTAACTCCAGTGCGAAACGGAAGGCGCAAGGCGAAGTTGCGAGGCTAGCAGTGAAACAGAGGAGGGCGCGAAACAGTAGAAGCCCGGAGTGAGGGGAACATGTTTAAAATGCTGAGGAATCTAGTGCTGAGTTTACATTGCAGTTAGCAGTAGAATTCTTCACTGGATGTGTATATGCATCAATTCTAGTACAGGTAACTTTGGTTACATGCAGAATTAGGCATCCGTTGGTGTTGCATGAAAATAGATGATTGGTCAATGTTCAGTGACTTGGAATCCTGTGAATTGCTATGTCATGTTTGATGTATTGAGTAATTGGCAGTGGCTAAAAAAAACTTTGTGATTTCTCTGATCATCTGTCCTAATTAGTTTTGTCATGTTTGCAACTATGTGTATACTCCCCATAAAAGAAGAAATATGTTCGTACTGTAGCCAAAAAAAAAA]

[-] EMBL CA759278             [TGCTTCTGAGGAGGCTATTGGAAAATTTCCCCATGTTTAATAACCTGGATACTCTGTCCCTTGGTGAATGGTGTATGGTTCCTGACTTCAGTGCTTTGTCAACCATACTTACGAAATCACCAAATGTAAAAAGGCTTTATCTTCACCTTGACGTGATTCACAGAAGAAGAAGGTGCATCGATCCCAGTGGAGGATCATTTTCTTGCAACAACCTGGAGAAGGTTAAGATCACATGTTGTAAAGATGATGTAATGGTCCATATGCTGGCTCCATTCCTCCAAGATAACGGTGTATCGCCTGAGAAGATTTTTGTTTGTCGCACTTCCAGCCCACATAATGGCAAGGAAGGCAGGGGTAGTAACTCCAGTGCGAAACGGAAGGCGCAAGGCGAAGTTGCGAGGCTAGCAGTGAAACAGAGGAGGGCGCGAAACAGTAGAAGCCCGGAGTGAGGGGAACATGTTTAAAATGCTGAGGAATCTAGTGCTGAGTTTACATTGCAGTTAGCAGTAGAATTCTTCACTGGATGTGTATATGCATCAATTCTAGTACAGGTAACTTTGGTTACATGCAGAATTAGGCATCCGTTGGTGTTGCATGAAAATAGATGATTGGTCAATGTTCAGTGACTTGGAATCCTGTGAATTGCTATGTCATGTTTGATGTATTGAGTAATTGGCAGTGGCTAAAAAAAA                                                                                                             ]
[+] EMBL BQ908791             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgAGTGACTTGAAATCCTGTGAATTGCTATGCCATGTTTGATGTATTGAGTAATTGGCAGTGGCTACATTTGTCTTTGTGATTTCTCTGATCATCTGTCCTAATTAGTTTTGTCATGTTTGCAACTATGTGTATACTCCCCATAAAAGAAGAAATATGTTCGTACTGTAGCCAAAAAAAAAA]


>consensus_9781#3 TGCTTCTGAGGAGGCTATTGGAAAATTTCCCCATGTTTAATAACCTGGATACTCTGTCCC TTGGTGAATGGTGTATGGTTCCTGACTTCAGTGCTTTGTCAACCATACTTACGAAATCAC CAAATGTAAAAAGGCTTTATCTTCACCTTGACGTGATTCACAGAAGAAGAAGGTGCATCG ATCCCAGTGGAGGATCATTTTCTTGCAACAACCTGGAGAAGGTTAAGATCACATGTTGTA AAGATGATGTAATGGTCCATATGCTGGCTCCATTCCTCCAAGATAACGGTGTATCGCCTG AGAAGATTTTTGTTTGTCGCACTTCCAGCCCACATAATGGCAAGGAAGGCAGGGGTAGTA ACTCCAGTGCGAAACGGAAGGCGCAAGGCGAAGTTGCGAGGCTAGCAGTGAAACAGAGGA GGGCGCGAAACAGTAGAAGCCCGGAGTGAGGGGAACATGTTTAAAATGCTGAGGAATCTA GTGCTGAGTTTACATTGCAGTTAGCAGTAGAATTCTTCACTGGATGTGTATATGCATCAA TTCTAGTACAGGTAACTTTGGTTACATGCAGAATTAGGCATCCGTTGGTGTTGCATGAAA ATAGATGATTGGTCAATGTTCAGTGACTTGGAATCCTGTGAATTGCTATGTCATGTTTGA TGTATTGAGTAATTGGCAGTGGCTAAAAAAAACTTTGTGATTTCTCTGATCATCTGTCCT AATTAGTTTTGTCATGTTTGCAACTATGTGTATACTCCCCATAAAAGAAGAAATATGTTC GTACTGTAGCCAAAAAAAAAA



consensusID : consensus_9781#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 207
fasta sequence
                              [TAACAAGTAGAATTCTTCCACAGTATGTGTATATGCATCAAAATCTAGTACAGGTACTTTGGGGACATGAAAATTTATGCATCCGTTGGTGTTGCATGAAAATAGATGGTTGGCCATGTTCAGTGACTTGGAATCCTGTGAATTGCTATATCATGTTTGACGTATATTGAGTAGTTTTGGCAGTGGCTACATTTGGATTAAAAAAAA]

[+] EMBL BI813500             [TAACAAGTAGAATTCTTCCACAGTATGTGTATATGCATCAAAATCTAGTACAGGTACTTTGGGGACATGAAAATTTATGCATCCGTTGGTGTTGCATGAAAATAGATGGTTGGCCATGTTCAGTGACTTGGAATCCTGTGAATTGCTATATCATGTTTGACGTATATTGAGTAGTTTTGGCAGTGGCTACATTTGGATTAAAAAAAA]


>consensus_9781#4 TAACAAGTAGAATTCTTCCACAGTATGTGTATATGCATCAAAATCTAGTACAGGTACTTT GGGGACATGAAAATTTATGCATCCGTTGGTGTTGCATGAAAATAGATGGTTGGCCATGTT CAGTGACTTGGAATCCTGTGAATTGCTATATCATGTTTGACGTATATTGAGTAGTTTTGG CAGTGGCTACATTTGGATTAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9781#1      GTTCTACCACCTGCTGGTGCTCCAAAGTTGAAAGTCGAAAGCAGCGAGAGCTCTTGGCGC 60
consensus_9781#2      ----CGAAGCGCGAAGCCGTTCTA---TCGAAACTCGAAAGCAGCGAGAGCTCTTGGCGC 53
consensus_9781#0      ------------------------------------------------------------
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      ---CCATCGATT-CGCCAAGAAATC----CCC-AATCTCTCCGCAACCCGTTCGACGGAA 111
consensus_9781#2      GACCCATCGATTTCGCCAAGAAATC----CCCCAATCTCTCCGCGAACTGTTCGACGGAA 109
consensus_9781#0      CCGTCCTCGATT-CGCCAAAAAAGCAAGTCCCCAATCTCTCCGCAACCTGTTCGACGGAA 59
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      TGCAGCAGGGAGCCGCGGGGCAGGCGCCGCGGCGCGACGACGGGGAGGCGGCGGGGCCTT 171
consensus_9781#2      TGCACCAGGGAGCGGCGGGAC------------------------------CTGGCCCAT 139
consensus_9781#0      TGCAGCAGGGAGCGGCGGGGCAGGCTGGGCCGTCGGGTGGTGG---------TGGAGGCG 110
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      CCGGTGGTGGCGGGGGCGGTGGTGAGGACCGCCTCAGCGCGCTCCCGGACGCGGTGCTCG 231
consensus_9781#2      CCGGCGGTGGCGGCG------------ACCGTCTCAGCGCCCTCCCGGACGCGGTGCTGT 187
consensus_9781#0      GTGGCGGTGGCGGTGGCGGTGGCGCGGACCGCCTCAGCGCGCTCCCGGACGCGGTGCTCT 170
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      GCAGGATCGTGTCGCACCTGAAGGCGTGGCAGGCGGTGCGCACGAGCGTGCTCTCCAAGC 291
consensus_9781#2      TCCGGATCGTGTCGCACCTGAAGGCGCGGGAGGCGGTGCGCACGAGCGGGCTCTCCAGGC 247
consensus_9781#0      TCCGGATCGTGTCGCACCTGGGGGCGCGGCAGGCGGTGCGCACGAGCGTGCTATCCAAGC 230
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      GGTGGCGCGACGTGTGGGCGTCCGCGCCGCGCGTCGACATCCGCCACCCCTGCGCCTGCA 351
consensus_9781#2      GGTGGCGCCACGTGTGGGCGTCCGCGCCGCGCGTCGACGTCCGCTACCCGTGCGCCTGCG 307
consensus_9781#0      GGTGGCGCCACGTGTGGGCGTCCGCGCCGCGCGTCGACGTCCGCCACCCCTGCGCCTGCG 290
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      ACGAGCGCGCCG---ACCAGGAGAGGTTCCACGGCTTCGTCGACACCCTGCTCCTCAGGC 408
consensus_9781#2      ACGGCCGCGCCGTCGACCAGAAGAGCTTCCGCGACTTCGTCACCATCCTGCTCCTCAGGC 367
consensus_9781#0      ACGAGAGCGCCG---ACCAGGAGAGGTTCCACGGCTTCGTCACCACCATGCTCCTCAGGC 347
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      GCCGCCCGTTCGCTCCCATCAAGGCGCTCCGGCTGTGCTGGAGCCACGACGG---CGACG 465
consensus_9781#2      GCCGCCCGCTCGCCCCCTTCAAGGCGCTCCGGCTGAGCTGGAGCCACGACGAGGACGACG 427
consensus_9781#0      GCCGCCCGTTCGCCCCCATCAAGGCGCTCCGGCTGTGCTGGAGCCACGACGG---CGACG 404
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      CCAACAACTGGATCGTTCATGCCGTCAGGCGCGGGGCCGAAGAAATCGAACTCTCCACGA 525
consensus_9781#2      TGAGCGCGTGGATCGCTCACGCCGTCAGGCGCGGGGCCGAAGAAATCGATCTCTCCGCGA 487
consensus_9781#0      CCAACAACTGGATCGCTCATGCTGTCAGGCGTGGGGCCGAAGAAATCGATTTCTCCGCGA 464
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      GGCATCACCAAGGTTCTCTGGAACCGGAGCCGGAGTTCACGAGCTTCATTTCTCCCAAGA 585
consensus_9781#2      GGCGTCACCATGGCT------ACCCGGTGCCGGATTACAAACACTTCATTTCTCCCAAGA 541
consensus_9781#0      GGCATCACCAAGATGATCCGAAACCGGAGCTAGAGTACACGAGCTTCATTTCTCACAAGA 524
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      TCAAGATCTTGAAGCTGATGCGTGTCGG------------CATGGACATCAGGTCTATCA 633
consensus_9781#2      TCAAGATCTTGAAGCTGACGCATCTCGGGACGACGAGGTTCACGGCCGACAACACCCTCG 601
consensus_9781#0      TCAAGATCTTGAAGCTGACGCGTGTCCGG------------ATGGGCATCAAGTTTATCA 572
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      CGCAAATCTGCTCTAGGTGCACTTCTTTGGAAGAATTAGAGCTCGAGGATGTTCGCCTAC 693
consensus_9781#2      ACCTGCTCTGCTCTGGCTGCACTTCTTTGGAAGAACTGGAGCTCAAGGATATCAAATCAC 661
consensus_9781#0      CGCAGATCTGCTATAGGTGCACTTTTTTGGAAGAATTAGAGCTCAAGAATGTTAATTCAC 632
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      TTGAAGGGCAGATTCAATCGGCCTCGCTGAAGCGCTTGTCTATCATCAAATGCTATATCG 753
consensus_9781#2      TCTGGGGGGGAATTCAATCAGACTCGCTGAAGCGCTTGTCGATCATCAACTGCCATGTGA 721
consensus_9781#0      TTGAAGGGCAGATTCAATCGACCTCGCTGAAGCGCTTGTCTATCATCAACTGCCTTATCT 692
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      A---TGATGGCTTTTTGGTTGATGCTCCGAACCTTGTCTCGCTCTGCTTCATCAGACCTC 810
consensus_9781#2      CATCCGATGGCTTCCTGGTTGAAGCTCCCAATCTTATATCGCTCTGCTGCATCAGACCTG 781
consensus_9781#0      C---TGATGGATTTTTGGTTGATGCTCCGAACCTTATCTCGCTCTGCTTCTTCAGACCTC 749
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      TCGGCATTGAGAGAAAGGGGGGATCCAATTCCTCGTCTGATAGACTTTGGTGGCCA---- 866
consensus_9781#2      CCCGAGCTGTTCCTTGGTTCAGCCACATGGTGTCG-CTGGTGGAAGCCACTGTCGT---- 836
consensus_9781#0      TCAGCGGTAAGAGCACGGAGGGAGCCAATCACTCGTCTGATAATAGGAGTTGGCCATTCT 809
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      --------GTGTGGCTGAATGACGACGATGGATATGATCATGATGATGATTTCTTTGCAA 918
consensus_9781#2      --------GCTTGA-TGATTCTCG-CTTGAGTGATGACTATCAGCAGCCAGTGTTGGAGG 886
consensus_9781#0      CAGCGTCAGTGTGGGAGTTTGATGACGATGGATCTGATCATGATGATGATTTCTTTGCAA 869
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      ATGCTAGTGCTGT---ACAATCTGACGATAAGAGAGGCAGTAAATCTGAT---------- 965
consensus_9781#2      ATGACAACGATGG---GTCTGATTATGATGATAATTTCTTTGCACCTAAA---------- 933
consensus_9781#0      TTGCTAGTGGTGGTGAACACTTTGATGATAAGAGAGACAATGAATCTGATCAAGACAATG 929
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      --------CAAGATGATCTTGAAGGTTGCAATGATGATGATTGTACTGTGGCCTATGATG 1017
consensus_9781#2      --------GCTGAGGGCCCTGATGATAAGAGAGACAATGAAGCTGATAATGACTCTGGTG 985
consensus_9781#0      GTTCTAGTGATGAAGACTCAGATGATAAGAGAGACCAAGAATCTGATCATGATGAAGATG 989
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      -------------AGATTGCAGAT--GAGTACTCCAGTAATGGTGGTCCTGGTGATG--A 1060
consensus_9781#2      -------------ATAAGAGAAAT--AGGGACGGTAGTAAATCTGATCTTGATGATC--A 1028
consensus_9781#0      TTCCCTCTTCCCCATATTCTGATTCTAAGGACTCCTGTGATGGCAGTGACAGTGATGCGA 1049
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      ACATGGAGGAT------ATTCTGAGAGCGATGATTCTACAATTTGTGGTCCCTATGGTTT 1114
consensus_9781#2      TGATGGTGAAT------ATGATCATGAGGATGGTTCTGAGTCTGGTGATAAAGAGG---- 1078
consensus_9781#0      GTCTTATGAATCCAGTGATAAGGAGGGTGATGATCTTGAAGATTGCGACAGCAATGATAT 1109
consensus_9781#3      ------------------------------------------------------------
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      ATTTAATGTTCTTGTAAAGACATCTCTGATCATGATAGCCCGGGAAGGAGAGCTGCTTCT 1174
consensus_9781#2      --TTGATGATCTTG--AAGGTGGCGATGATCGAACTGTGACCTATGGTGAGATTGCAGAT 1134
consensus_9781#0      GTTGGAAAACTTGATCAAGGTAGCTAGGGGCTTGACAGCTTATCATGGAGAGGTGCTTCT 1169
consensus_9781#3      -----------------------------------------------------TGCTTCT 7
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      GAGGAGGGAATTGGAAAATTTCCCCATGTTCATTAACCTGAATACTCTGTCCCTTGGTGA 1234
consensus_9781#2      GAGTCTTCCAGTT-ATGGTATTCCCATTCCCAGTGATGAATATGGCGGAAACTATGGGAA 1193
consensus_9781#0      GAGGAGGCAATTGGAAAATTTCCCCATGTTCAATAACCTGAAAACTCTGTCCCTTGGTGA 1229
consensus_9781#3      GAGGAGGCTATTGGAAAATTTCCCCATGTTTAATAACCTGGATACTCTGTCCCTTGGTGA 67
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      --ATGGT-GTATGGTTCCTGACTTCAGTGCTTTG-TCAACCATACTTGAGAAATCACCTA 1290
consensus_9781#2      CCATGATTATACTATTTTCGGTGGTGATCATATGCTTGACCACTTGTCAGATGTTAGA-A 1252
consensus_9781#0      --ATGGT-GTATGGTTCCTGACTTCAGTGCTTTG-TCAACCATACTTAAGAAATCACCTA 1285
consensus_9781#3      --ATGGT-GTATGGTTCCTGACTTCAGTGCTTTG-TCAACCATACTTACGAAATCACCAA 123
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      ATGTAGAAAGGCTTTATATTCACCTTGACATGGTCCACAGAGGAAGAGGGGACATCGATC 1350
consensus_9781#2      CTTTGGGTCTGTTAGGCCATCAAGGAGAGGACATCCACAGAAGCAGAGGGGGCATCAACC 1312
consensus_9781#0      AGGTAGAAAGGCTTTATCTTCACCTTGACATGATCCACAGAGGAAGAGGGGACATCGATC 1345
consensus_9781#3      ATGTAAAAAGGCTTTATCTTCACCTTGACGTGATTCACAGAAGAAGAAGGTGCATCGATC 183
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      CAAGTGGAGGATCATTTGCTTGCAACAACCTGAAGAGGGTTAAGATCACATGTTGTGAAG 1410
consensus_9781#2      CAACGGGAGGATCATTTGCTTGCAACAACCTGAAGAAGGTTAAGATCACATGCCGTAAAG 1372
consensus_9781#0      CAAGTGGAGGATCATTTGCTTGCAACAACCTGAGGAAGGTTAAGATCACATGTTGTAAAG 1405
consensus_9781#3      CCAGTGGAGGATCATTTTCTTGCAACAACCTGGAGAAGGTTAAGATCACATGTTGTAAAG 243
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      ATGATGTAATGGTCCATAAGCTGGCGGAATTCCTCGAAGCTAACGGCCTACAGCGTCAGA 1470
consensus_9781#2      ATGATGTAATGGTCCATATGCTGGCAAAATTCCTCCAACGTAACGGCATATCGCTTCAGA 1432
consensus_9781#0      ATGATGAAATGGTCCATATGCTGAAACAATTCCTCCAACGTAACGGCATATCACTTGAGA 1465
consensus_9781#3      ATGATGTAATGGTCCATATGCTGGCTCCATTCCTCCAAGATAACGGTGTATCGCCTGAGA 303
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      GGATTTTTGTTCGTCGCACATCCAGAACTCGTAG---------------------AGACT 1509
consensus_9781#2      AGATTTTTGTTCGTCGCACTTCCAGCACTCATAATGGCGAGGAAGGCACGGGCAAGGACT 1492
consensus_9781#0      AGATT---GTTCATCACACTTCTAGCACTCATAATGGCGAAGAAGACGGAGGCGGGGACT 1522
consensus_9781#3      AGATTTTTGTTTGTCGCACTTCCAGCCCACATAATGGCAAGGAAGGCAGGGGTAGTAACT 363
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      CCAGGGCGAAACAGAAAGAGCAAGAGGATCATTTGAGGCTCGCAAAGAAGTGGT---GAA 1566
consensus_9781#2      CCAGTGCAAAACGGAAGGCGCAAGACGAAGCTGCGAGGCGAGCAGTGAAACAGCTGAGGA 1552
consensus_9781#0      CCAGTGCGAAACGGAAGGCGCAAGGCGAAGTTGCGAGGCTAGCAGTGAAACAGA---GGA 1579
consensus_9781#3      CCAGTGCGAAACGGAAGGCGCAAGGCGAAGTTGCGAGGCTAGCAGTGAAACAGA---GGA 420
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      CGGTGTGAAATAGTAGAAGCCTGGAGTGAGGGAAAGGTGCCTAAAATGCCGAAAGCCGGT 1626
consensus_9781#2      GGGCACGAAACAGTAGAAGCCCAGAGTGAGGGAAAGGTGTTTAAAATGCTGAAAACCGGT 1612
consensus_9781#0      GGGCGCGAAACAGTAGAAGCCCGGAGTGAGGGGAACATGTTTAAAATGC----------- 1628
consensus_9781#3      GGGCGCGAAACAGTAGAAGCCCGGAGTGAGGGGAACATGTTTAAAATGC----------- 469
consensus_9781#4      ------------------------------------------------------------
                                                                                  

consensus_9781#1      GCGGGCGTTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAACACTAGGATTGTCT-AC 1685
consensus_9781#2      ATGGATGTTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAACAGTAGGATTGTCT-AC 1671
consensus_9781#0      --------TGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAGCAGTAGAATTCTTC-AC 1679
consensus_9781#3      --------TGAGGAATCTAGTGCTGAGTTTACATTGCAGTTAGCAGTAGAATTCTTC-AC 520
consensus_9781#4      ---------------------------------------TAACAAGTAGAATTCTTCCAC 21
                                                             * *  * *** *** *   **

consensus_9781#1      TGGATGTGTATATGCAT---CAGTTTTAGTACAGGTA-CCT-GGGTATGTGCAAGACTTT 1740
consensus_9781#2      TGAATGTGTAACTATATGCACAGTGTTAGTACAGTTA-CCT-GGATATATGAAAAATTTT 1729
consensus_9781#0      AGGATGTGTATATGCAT---CAAATCTAGTACAGGTA-CTTTGGGGACATGAAAAATTAT 1735
consensus_9781#3      TGGATGTGTATATGCATC--AAT-TCTAGTACAGGTAACTTTGGTTACATGCAGAATTAG 577
consensus_9781#4      AGTATGTGTATATGCATC--AAAATCTAGTACAGGTA-CTTTGGGGACATGAAAATTTAT 78
                       * *******  *  **    *    ******** ** * * **  *  ** *    *  

consensus_9781#1      GCATTCGTTGGTGTTGCATGAAAATAGATGGCTGAT------------------------ 1776
consensus_9781#2      GCATTCGTTG-------------------------------------------------- 1739
consensus_9781#0      GCATCCGTTGGTGTTGCATGAAAATAGATCGTTGGTCAATGTTCAGTGACTTGGAATCCT 1795
consensus_9781#3      GCATCCGTTGGTGTTGCATGAAAATAGATGATTGGTCAATGTTCAGTGACTTGGAATCCT 637
consensus_9781#4      GCATCCGTTGGTGTTGCATGAAAATAGATGGTTGGCCA-TGTTCAGTGACTTGGAATCCT 137
                      **** *****                                                  

consensus_9781#1      ------------------------------------------------------------
consensus_9781#2      ------------------------------------------------------------
consensus_9781#0      GTGAATTGCTATATGCCTATATCATGTTTGATGTATTGAGTAGTAATT------------ 1843
consensus_9781#3      GTGAATTGCTATGTCATGTTTGATGTAT--TGAGTAATT--GGCAGTGGCTAAAAAAAAC 693
consensus_9781#4      GTGAATTGCTATATCATGTTTGACGTATATTGAGTAGTTTTGGCAGTGGCTACATTTGGA 197
                                                                                  

consensus_9781#1      ------------------------------------------------------------
consensus_9781#2      ------------------------------------------------------------
consensus_9781#0      ------------------------------------------------------------
consensus_9781#3      TTTGTGATTTCTCTGATCATCTGTCCTAATTAGTTTTGTCATGTTTGCAACTATGTGTAT 753
consensus_9781#4      TTAAAAAAAA-------------------------------------------------- 207
                                                                                  

consensus_9781#1      ------------------------------------------------
consensus_9781#2      ------------------------------------------------
consensus_9781#0      ------------------------------------------------
consensus_9781#3      ACTCCCCATAAAAGAAGAAATATGTTCGTACTGTAGCCAAAAAAAAAA 801
consensus_9781#4      ------------------------------------------------
                                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)