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Oryza sativa
cluster # 9785 cluster # 9785       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9785#0 length = 1888 sequences # 5  
consensus_9785#1 length = 816 sequences # 1  

consensusID : consensus_9785#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1888
fasta sequence
                              [ACGACTTCTTCTTCTTCCTGCTCTACCTTCTTGGCTTTTGCCTCTGTTCCTCTTCCAAGATTTGCGAGATGGTGGCGGTGACGCCGGGCAGGCGCCGCCGGCCTGCAGGATGCGCCGCGGGGCACCACCACCAGCACCAGCAGCAGAGGCTGCTGGCCGTCGCCGCCCGCCTCGCCGCGGCGAAGCCGGCGGCCACTACGGAGGCCGCCGTGTACGGTGGCGTAGGAGGAGGAGGATGCTGCCTCGAGTTCCTCGACTGCGTGCTCCGGGCGATGGGCGTCGCCACCCCGGCCGAGATCATGCCCCCCGCGGACTTCAGGTGGGCCGCGCGCCCGATGCGGCGGCGCCGCCGCGGGGGCTCCTCGTCCTCCTCCTCCTCGCCGCGCGACCGCGAGCCGAGGGACGGCCGGATCGCCGCCAACGGCGCCTCCGCTGCCGCCTCGCTCTACACGATGCGGGGCAACAAGGGCGTCAACCAGGACGCCATGCTTGTCTGGGAGAATTTCTGTTCAAAGGAAGATACAATTTTTTGTGGTGTTTTTGATGGCCATGGACCATATGGCCATTTGGTGTCCAAGAGGGTCAGAGATCTCCTCCCTATAAAGTTGAGTGCAAATTTAGGAAGAGATGGACACAAAGAAACTTCAACTAACATTGTCACAAGCAGCATGACTGAAGGTGGTGGCACCGAACGCATGGATAGAGATACTGAAACTCCCCTGGGAACGGAGGAGAATGGAGACTACCCCGAGATGTTTGCTGCATTAAGAACTTCATTATTAAGGGCATTTTATGTAATGGACAGGGATCTTAAGTTTCATAAAACCATTGACTCTGTGTTCAGTGGTACTACAGCAGTCACAGTGATCAAGCAGGGACATGATCTCCTGATTGGAAACTTGGGGGATTCTAGAGCTGTCTTGGGAACTAGAGATGAATATGACCAGTTTTTTGCTGTACAATTGACAGTTGACCTGAAGCCTACCATTCCAAGTGAAGCTGCACGAATTAGGGAACGAAGTGGCAGAATATTCTCTCTGCCAGATGAGCCAGATGTTGCTCGTGTTTGGCTTCCGAAGTACAACATGCCAGGGTTGGCCATGGCAAGAGCATTTGGAGACTTTTGTCTAAAGGATTATGGTCTAATTTCTATGCCTGATGTTTCCTACCACCGCATCACTGAAAAGGATGAATTTGTTGTGTTGGCAACTGATGGGGTGTGGGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGTCAGCCAAGCCAAGTCAGAAGCCTCAGCGGCACGATTTGTTGTTGAATCGGCTCAACGTGCATGGAGAACACGGTTCCCCACATCAAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGAATACAGATGCTAGAAATAAACCCCCCGGTTCAGGAATCAAAGATTTGGCCAATGCCATAGAACTGGGTGGTGGTAATCTTTCTTGACCATCAAATCAAGCACTAGGGCTCTTACCGATCTCGTTACTGCATT-GGTAACAGGTGATGAGTGGCCTGTC-CTTGATGGTGTCTCGAAAAATC-TGCGATAGCCTACTTAAGTTGCAAGGGAAA-GCATAAAATCCGTACTTGTCTATGGATTAGGATAACCATTTTGCCCAAGATTTGTGCAGCTTATTATACTTGCAATGATTCTTCTGCATGGGAAGACGGAGCCAGTTTACTTTGCTTGT-TGGGGAGTGGTTGCTTGGTTTATTCTGCAC-TGC-AATTAGTGGTTCTAGGACCTCTGTTTCAGTTATTCTGTAAAGTATCAAATCAGCTTAGTGCAAGTCTAAAGAAATTCAGTCTAGTGCTGTGGTATTATTACATTTTGTTCATAATAATAGC-GAAGATTTATATGTCAAACATAAAGG]

[+] EMBL AK069106             [ACGACTTCTTCTTCTTCCTGCTCTACCTTCTTGGCTTTTGCCTCTGTTCCTCTTCCAAGATTTGCGAGATGGTGGCGGTGACGCCGGGCAGGCGCCGCCGGCCTGCAGGATGCGCCGCGGGGCACCACCACCAGCACCAGCAGCAGAGGCTGCTGGCCGTCGCCGCCCGCCTCGCCGCGGCGAAGCCGGCGGCCACTACGGAGGCCGCCGTGTACGGTGGCGTAGGAGGAGGAGGATGCTGCCTCGAGTTCCTCGACTGCGTGCTCCGGGCGATGGGCGTCGCCACCCCGGCCGAGATCATGCCCCCCGCGGACTTCAGGTGGGCCGCGCGCCCGATGCGGCGGCGCCGCCGCGGGGGCTCCTCGTCCTCCTCCTCCTCGCCGCGCGACCGCGAGCCGAGGGACGGCCGGATCGCCGCCAACGGCGCCTCCGCTGCCGCCTCGCTCTACACGATGCGGGGCAACAAGGGCGTCAACCAGGACGCCATGCTTGTCTGGGAGAATTTCTGTTCAAAGGAAGATACAATTTTTTGTGGTGTTTTTGATGGCCATGGACCATATGGCCATTTGGTGTCCAAGAGGGTCAGAGATCTCCTCCCTATAAAGTTGAGTGCAAATTTAGGAAGAGATGGACACAAAGAAACTTCAACTAACATTGTCACAAGCAGCATGACTGAAGGTGGTGGCACCGAACGCATGGATAGAGATACTGAAACTCCCCTGGGAACGGAGGAGAATGGAGACTACCCCGAGATGTTTGCTGCATTAAGAACTTCATTATTAAGGGCATTTTATGTAATGGACAGGGATCTTAAGTTTCATAAAACCATTGACTCTGTGTTCAGTGGTACTACAGCAGTCACAGTGATCAAGCAGGGACATGATCTCCTGATTGGAAACTTGGGGGATTCTAGAGCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK071295             [     TTCTTCTTCTTCCTGCTCTACCTTCTTGGCTTTTGCCTCTGTTCCTCTTCCAAGATTTGCGAGATGGTGGCGGTGACGCCGGGCAGGCGCCGCCGGCCTGCAGGATGCGCCGCGGGGCACCACCACCAGCACCAGCAGCAGAGGCTGCTGGCCGTCGCCGCCCGCCTCGCCGCGGCGAAGCCGGCGGCCACTACGGAGGCCGCCGTGTACGGTGGCGTAGGAGGAGGAGGATGCTGCCTCGAGTTCCTCGACTGCGTGCTCCGGGCGATGGGCGTCGCCACCCTGGCCGAGATCATGCCCCCCGCGGACTTCAGGTGGGCCGCGCGCCCGATGCGGCGGCGCCGCCGCGGGGGCTCCTCGTCCTCCTCCTCCTCGCCGCGCGACCGCGAGCCGAGGGACGGCCGGATCGCCGCCAACGGCGCCTCCGCTGCCGCCTCGCTCTACACGATGCGGGGCAACAAGGGCGTCAACCAGGACGCCATGCTTGTCTGGGAGAATTTCTGTTCAAAAGAAGATACAATTTTTTGTGGTGTTTTTGATGGCCATGGACCATATGGCCATTTGGTGTCCAAGAGGGTCAGAGATCTCCTCCCTATAAAGTTGAGTGCAAATTTAGGAAGAGATGGACACAAAGAAACTTCAACTAACATTGTCACAAGCAGCATGACTGAAGGTGGTGGCACCGAACGCATGGATAGAGATACTGAAACTCCCCTGGGAACGGAGGAGAATGGAGACTACCCCGAGATGTTTGCTGCATTAAGAACTTCATTATTAAGGGCATTTTATGTAATGGACAGGGATCTTAAGTTTCATAAAACCATTGACTCTGTGTTCAGTGGTACTACAGCAGTCACAGTGATCAAGCAGGGACATGATCTCCTGATTGGAAACTTGGGGGATTCTAGAGCTGTCTTGGGAACTAGAGATGAATATGACCAGTTTTTTGCTGTACAATTGACAGTTGACCTGAAGCCTACCATTCCAAGTGAAGCTGCACGAATTAGGGAACGAAGTGGCAGAATATTCTCTCTGCCAGATGAGCCAGATGTTGCTCGTGTTTGGCTTCCGAAGTACAACATGCCAGGGTTGGCCATGGCAAGAGCATTTGGAGACTTTTGTCTAAAGGATTATGGTCTAATTTCTATGCCTGATGTTTCCTACCACCGCATCACTGAAAAGGATGAATTTGTTGTGTTGGCAACTGATGGGGTGTGGGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGTCAGCCAAGCCAAGTCAGAAGCCTCAGCGGCACGATTTGTTGTTGAATCGGCTCAACGTGCATGGAGAACACGGTTCCCCACATCAAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGAATACAGATGCTAGAAATAAACCCCCCGGTTCAGGAATCAAAGATTTGGCCAATGCCATAGAACTGGGTGGTGGTAATCTTTCTTGACCATCAAATCAAGCACTAGGGCTCTTACCGATCTCGTTACTGCATT GGTAACAGGTGATGAGTGGCCTGTC CTTGATGGTGTCTCGAAAAATC TGCGATAGCCTACTTAAGTTGCAAGGGAAA GCATAAAATCCGTACTTGTCTATGGATTAGGATAACCATTTTGCCCAAGATTTGTGCAGCTTATTATACTTGCAATGATTCTTCTGCATGGGAAGACGGAGCCAGTTTACTTTGCTTGT TGGGGAGTGGTTGCTTGGTTTATTCTGCAC TGC AATTAGTGGTTCTAGGACCTCTGTTTCAGTTATTCTGTAAAGTATCAAATCAGCTTAGTGCAAGTCTAAAGAAATTCAGTCTAGTGCTGTGGTATTATTACATTTTGTTCATAATAATAGC GAAGA                     ]
[+] EMBL CB645843             [                                                          GATTTGCTAGATGGTGGCGGTGACGCCGGGCAGGCGCCGCCGGCCTGCAGGATGCGCCGCGGGGCACCACCACCAGCACCAGCAGCAGAGGCTGCTGGCCGTCGCCGCCCGCCTCGCCGCGGCGAAGCCGGCGGCCACTACGGAGGCCGCCGTGTACGGTGGCGTAGGAGGAGGAGGATGCTGCCTCGAGTTCCTCGACTGCGTGCTCCGGGCGATGGGCGTCGCCACCCCGGCCGAGATCATGCCCCCCGCGGACTTCAGGTGGGCCGCGCGCCCGATGCGGCGGCGCCGCCGCGGGGGCTCCTCGTCCTCCTCCTCCTCGCCGCGCGACCGCGAGCCGAGGGACGGCCGGATCGCCGCCAACGGCGCCTCCGCTGCCGCCTCGCTCTACACGATGCGGGGCAACAAGGGCGTCAACCAGGACGCCATGCTTGTCTGGGAGAATTTCTGTTCAAAGGAAGATACAATTTTTTGTGGTGTTTTTGATGGCCATGGACCATATGGCCATTTGGTGTCCAAGAGGGTCAGAGATCTCCTCCCTATAAAGTTGAGTGCAAATTTAGGAAGAGATGGACACAAAGAAACTTCAACTAACATTGTCACAAGCAGCATGACTGAAGGTGGTGGCACCGAACGCATGGATAGAGATACTGAAACTCCCCTGGGAACGGAGGAGAATGGAGACTACCCCGAGATGTTTGCTGCATTAAGAACTTCATTATTAAGGGCATTTTATGTAATGGACAGGGATCTTAAGTTTCATAAAACCATTGACTCTGTAGTCAGTGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB645844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATTTGGAGACTTTTGTCTAAAGGATTATGGTCTAATTTCTATGCCTGATGTTTCCTACCACCGCATCACTGAAAAGGATGAATTTGTTGTGTTGGCAACTGATGGGGTGTGGGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGTCAGCCAAGCCAAGTCAGAAGCCTCAGCGGCACGATTTGTTGTTGAATCGGCTCAACGTGCATGGAGAACACGGTTCCCCACATCAAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGAATACAGATGCTAGAAATAAACCCCCCGGTTCAGGAATCAAAGATTTGGCCAATGCCATAGAACTGGGTGGTGGTAATCTTTCTTGACCATCAAATCAAGCACTAGGGCTCTTACCGATCTCGTTACTGCATT GGTAACAGGTGATGAGTGGCCTGTC CTTGATGGTGTCTCGAAAAATC TGCGATAGCCTACTTAAGTTGCAAGGGAAA GCATAAAATCCGTACTTGTCTATGGATTAGGATAACCATTTTGCCCAAGATTTGTGCAGCTTATTATACTTGCAATGATTCTTCTGCATGGGAAGACGGAGCCAGTTTACTTTGCTTGT TGGGGAGTGGTTGCTTGGTTTATTCTGCAC TGC AATTAGTGGTTCTAGGACCTCTGTTTCAGTTATTCTGTAAAGTATCAAATCAGCTTAGTGCAAGTCTAAAGAAATTCAGTCTAGTGCTGTGGTATTATTACATGGGGTTCATAATAATAGC GAAGATTTATATGTCAAACATAAAGG]
[+] EMBL BI813719             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTTGT GTAATCTTTCTGGACCATCAAATCAAGCACTAGGGCTCTTACCGATCTCGTTACTGCATTGGGTAACAGGTGATGAGTGCACTGTCACTTGATGGTGTCTCGAAAAATCGTGCGATAGCCTACTTAAGTTGCAAGGGAAAGGCATAAAATCCGTACTGGTCTATGGATTAGGATAACCATTTTGCCCAAGATTTGTGCAGCTTATTATACTTGCAATGATTCTTCTGCATGGGAAGACGGAGCCAGTTTACTTTGCTTGTCTGGGGAGT GTTGCTTGGTTTATTCGGCACGTCCAAATTA T GTT TAGGACCTCT TTTCA TTATTCT TAAAGTATCAAATCAGCTTAG CCAAGTCTAAAGAAATTCAGTCTA TCCTGT GTATTATAACATTTTGTTCATAATAATACCAGAAGATTTATATGTCAAAaaa     ]


>consensus_9785#0 ACGACTTCTTCTTCTTCCTGCTCTACCTTCTTGGCTTTTGCCTCTGTTCCTCTTCCAAGA TTTGCGAGATGGTGGCGGTGACGCCGGGCAGGCGCCGCCGGCCTGCAGGATGCGCCGCGG GGCACCACCACCAGCACCAGCAGCAGAGGCTGCTGGCCGTCGCCGCCCGCCTCGCCGCGG CGAAGCCGGCGGCCACTACGGAGGCCGCCGTGTACGGTGGCGTAGGAGGAGGAGGATGCT GCCTCGAGTTCCTCGACTGCGTGCTCCGGGCGATGGGCGTCGCCACCCCGGCCGAGATCA TGCCCCCCGCGGACTTCAGGTGGGCCGCGCGCCCGATGCGGCGGCGCCGCCGCGGGGGCT CCTCGTCCTCCTCCTCCTCGCCGCGCGACCGCGAGCCGAGGGACGGCCGGATCGCCGCCA ACGGCGCCTCCGCTGCCGCCTCGCTCTACACGATGCGGGGCAACAAGGGCGTCAACCAGG ACGCCATGCTTGTCTGGGAGAATTTCTGTTCAAAGGAAGATACAATTTTTTGTGGTGTTT TTGATGGCCATGGACCATATGGCCATTTGGTGTCCAAGAGGGTCAGAGATCTCCTCCCTA TAAAGTTGAGTGCAAATTTAGGAAGAGATGGACACAAAGAAACTTCAACTAACATTGTCA CAAGCAGCATGACTGAAGGTGGTGGCACCGAACGCATGGATAGAGATACTGAAACTCCCC TGGGAACGGAGGAGAATGGAGACTACCCCGAGATGTTTGCTGCATTAAGAACTTCATTAT TAAGGGCATTTTATGTAATGGACAGGGATCTTAAGTTTCATAAAACCATTGACTCTGTGT TCAGTGGTACTACAGCAGTCACAGTGATCAAGCAGGGACATGATCTCCTGATTGGAAACT TGGGGGATTCTAGAGCTGTCTTGGGAACTAGAGATGAATATGACCAGTTTTTTGCTGTAC AATTGACAGTTGACCTGAAGCCTACCATTCCAAGTGAAGCTGCACGAATTAGGGAACGAA GTGGCAGAATATTCTCTCTGCCAGATGAGCCAGATGTTGCTCGTGTTTGGCTTCCGAAGT ACAACATGCCAGGGTTGGCCATGGCAAGAGCATTTGGAGACTTTTGTCTAAAGGATTATG GTCTAATTTCTATGCCTGATGTTTCCTACCACCGCATCACTGAAAAGGATGAATTTGTTG TGTTGGCAACTGATGGGGTGTGGGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGTCA GCCAAGCCAAGTCAGAAGCCTCAGCGGCACGATTTGTTGTTGAATCGGCTCAACGTGCAT GGAGAACACGGTTCCCCACATCAAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGA ATACAGATGCTAGAAATAAACCCCCCGGTTCAGGAATCAAAGATTTGGCCAATGCCATAG AACTGGGTGGTGGTAATCTTTCTTGACCATCAAATCAAGCACTAGGGCTCTTACCGATCT CGTTACTGCATTGGTAACAGGTGATGAGTGGCCTGTCCTTGATGGTGTCTCGAAAAATCT GCGATAGCCTACTTAAGTTGCAAGGGAAAGCATAAAATCCGTACTTGTCTATGGATTAGG ATAACCATTTTGCCCAAGATTTGTGCAGCTTATTATACTTGCAATGATTCTTCTGCATGG GAAGACGGAGCCAGTTTACTTTGCTTGTTGGGGAGTGGTTGCTTGGTTTATTCTGCACTG CAATTAGTGGTTCTAGGACCTCTGTTTCAGTTATTCTGTAAAGTATCAAATCAGCTTAGT GCAAGTCTAAAGAAATTCAGTCTAGTGCTGTGGTATTATTACATTTTGTTCATAATAATA GCGAAGATTTATATGTCAAACATAAAGG



consensusID : consensus_9785#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 816
fasta sequence
                              [ACGAGACAACGGGGGACATGATCTCCTGATTGGAAACTTGGGGGATTCTAGAGCTGTCTTGGGAACTNGAGATGAATATGACCAGTTTTTTGCTGNACAATTGACAGTTGACCTGAAGCCTACCATTCCAAGTGAAGCTGCACGAATTAGGGAACGAAGNGGCAGAATATTCTCTCTGCCAGATGAGCCAGATGTTGCTCGTGTTTGGCTTCCGAAGNACAACATGCCAGGGTTGGCCATGGCAAGAGCATTTGGAGACTTTTGTCTAAAGGATTATGGTCTAATTTCTATGCCTGATGNTTCCTACCACCGCATCACTGAAAAGGATGAATTTGTCGTGTTGGCAACTGATGGGGTGTGGGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGNCAGCCAAGCCAAGTCAGAAGCCTCAGCGGCACGATTTGTTGTTGAATCAGCTCAACGTGCATGGAGAACACGGTTCCCCACATCAAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGAATACAGATGCTAGAAATAAACCCCCCCGGTTCAGGAATCAAAGATTTGGCCAATGCCATAGAACTGNGTGGTGGTAATCTTTCTTGACCATCAAAATCAAGCACTAGGGCTCTTACCGATCTCGTTACTGCATTGGTAACAGGTGATGAGTGGCCTGTCCCTTGATGGTGTCTTCGAAAAAATCTGCCGATAGCCTTACNTAAGTTGCAAGGGAAAGCATAAAATCCGTACCTTGGNTATGGGATTAGGATAACCATTTTGGCCCAAAATTTGNGCCGCTTATTNTACTTGCCAATGA]

[+] EMBL CA764816             [ACGAGACAACGGGGGACATGATCTCCTGATTGGAAACTTGGGGGATTCTAGAGCTGTCTTGGGAACTNGAGATGAATATGACCAGTTTTTTGCTGNACAATTGACAGTTGACCTGAAGCCTACCATTCCAAGTGAAGCTGCACGAATTAGGGAACGAAGNGGCAGAATATTCTCTCTGCCAGATGAGCCAGATGTTGCTCGTGTTTGGCTTCCGAAGNACAACATGCCAGGGTTGGCCATGGCAAGAGCATTTGGAGACTTTTGTCTAAAGGATTATGGTCTAATTTCTATGCCTGATGNTTCCTACCACCGCATCACTGAAAAGGATGAATTTGTCGTGTTGGCAACTGATGGGGTGTGGGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGNCAGCCAAGCCAAGTCAGAAGCCTCAGCGGCACGATTTGTTGTTGAATCAGCTCAACGTGCATGGAGAACACGGTTCCCCACATCAAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGAATACAGATGCTAGAAATAAACCCCCCCGGTTCAGGAATCAAAGATTTGGCCAATGCCATAGAACTGNGTGGTGGTAATCTTTCTTGACCATCAAAATCAAGCACTAGGGCTCTTACCGATCTCGTTACTGCATTGGTAACAGGTGATGAGTGGCCTGTCCCTTGATGGTGTCTTCGAAAAAATCTGCCGATAGCCTTACNTAAGTTGCAAGGGAAAGCATAAAATCCGTACCTTGGNTATGGGATTAGGATAACCATTTTGGCCCAAAATTTGNGCCGCTTATTNTACTTGCCAATGA]


>consensus_9785#1 ACGAGACAACGGGGGACATGATCTCCTGATTGGAAACTTGGGGGATTCTAGAGCTGTCTT GGGAACTNGAGATGAATATGACCAGTTTTTTGCTGNACAATTGACAGTTGACCTGAAGCC TACCATTCCAAGTGAAGCTGCACGAATTAGGGAACGAAGNGGCAGAATATTCTCTCTGCC AGATGAGCCAGATGTTGCTCGTGTTTGGCTTCCGAAGNACAACATGCCAGGGTTGGCCAT GGCAAGAGCATTTGGAGACTTTTGTCTAAAGGATTATGGTCTAATTTCTATGCCTGATGN TTCCTACCACCGCATCACTGAAAAGGATGAATTTGTCGTGTTGGCAACTGATGGGGTGTG GGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGNCAGCCAAGCCAAGTCAGAAGCCTC AGCGGCACGATTTGTTGTTGAATCAGCTCAACGTGCATGGAGAACACGGTTCCCCACATC AAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGAATACAGATGCTAGAAATAAACC CCCCCGGTTCAGGAATCAAAGATTTGGCCAATGCCATAGAACTGNGTGGTGGTAATCTTT CTTGACCATCAAAATCAAGCACTAGGGCTCTTACCGATCTCGTTACTGCATTGGTAACAG GTGATGAGTGGCCTGTCCCTTGATGGTGTCTTCGAAAAAATCTGCCGATAGCCTTACNTA AGTTGCAAGGGAAAGCATAAAATCCGTACCTTGGNTATGGGATTAGGATAACCATTTTGG CCCAAAATTTGNGCCGCTTATTNTACTTGCCAATGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9785#0      ACGACTTCTTCTTCTTCCTGCTCTACCTTCTTGGCTTTTGCCTCTGTTCCTCTTCCAAGA 60
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      TTTGCGAGATGGTGGCGGTGACGCCGGGCAGGCGCCGCCGGCCTGCAGGATGCGCCGCGG 120
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      GGCACCACCACCAGCACCAGCAGCAGAGGCTGCTGGCCGTCGCCGCCCGCCTCGCCGCGG 180
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      CGAAGCCGGCGGCCACTACGGAGGCCGCCGTGTACGGTGGCGTAGGAGGAGGAGGATGCT 240
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      GCCTCGAGTTCCTCGACTGCGTGCTCCGGGCGATGGGCGTCGCCACCCCGGCCGAGATCA 300
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      TGCCCCCCGCGGACTTCAGGTGGGCCGCGCGCCCGATGCGGCGGCGCCGCCGCGGGGGCT 360
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      CCTCGTCCTCCTCCTCCTCGCCGCGCGACCGCGAGCCGAGGGACGGCCGGATCGCCGCCA 420
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      ACGGCGCCTCCGCTGCCGCCTCGCTCTACACGATGCGGGGCAACAAGGGCGTCAACCAGG 480
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      ACGCCATGCTTGTCTGGGAGAATTTCTGTTCAAAGGAAGATACAATTTTTTGTGGTGTTT 540
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      TTGATGGCCATGGACCATATGGCCATTTGGTGTCCAAGAGGGTCAGAGATCTCCTCCCTA 600
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      TAAAGTTGAGTGCAAATTTAGGAAGAGATGGACACAAAGAAACTTCAACTAACATTGTCA 660
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      CAAGCAGCATGACTGAAGGTGGTGGCACCGAACGCATGGATAGAGATACTGAAACTCCCC 720
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      TGGGAACGGAGGAGAATGGAGACTACCCCGAGATGTTTGCTGCATTAAGAACTTCATTAT 780
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      TAAGGGCATTTTATGTAATGGACAGGGATCTTAAGTTTCATAAAACCATTGACTCTGTGT 840
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      TCAGTGGTACTACAGCAGTCACAGTGATCAAGCAGGGACATGATCTCCTGATTGGAAACT 900
consensus_9785#1      ----------------------ACGAGACAACGGGGGACATGATCTCCTGATTGGAAACT 38
                                            *     ***   **************************

consensus_9785#0      TGGGGGATTCTAGAGCTGTCTTGGGAACTAGAGATGAATATGACCAGTTTTTTGCTGTAC 960
consensus_9785#1      TGGGGGATTCTAGAGCTGTCTTGGGAACTNGAGATGAATATGACCAGTTTTTTGCTGNAC 98
                      ***************************** *************************** **

consensus_9785#0      AATTGACAGTTGACCTGAAGCCTACCATTCCAAGTGAAGCTGCACGAATTAGGGAACGAA 1020
consensus_9785#1      AATTGACAGTTGACCTGAAGCCTACCATTCCAAGTGAAGCTGCACGAATTAGGGAACGAA 158
                      ************************************************************

consensus_9785#0      GTGGCAGAATATTCTCTCTGCCAGATGAGCCAGATGTTGCTCGTGTTTGGCTTCCGAAGT 1080
consensus_9785#1      GNGGCAGAATATTCTCTCTGCCAGATGAGCCAGATGTTGCTCGTGTTTGGCTTCCGAAGN 218
                      * ********************************************************* 

consensus_9785#0      ACAACATGCCAGGGTTGGCCATGGCAAGAGCATTTGGAGACTTTTGTCTAAAGGATTATG 1140
consensus_9785#1      ACAACATGCCAGGGTTGGCCATGGCAAGAGCATTTGGAGACTTTTGTCTAAAGGATTATG 278
                      ************************************************************

consensus_9785#0      GTCTAATTTCTATGCCTGATGTTTCCTACCACCGCATCACTGAAAAGGATGAATTTGTTG 1200
consensus_9785#1      GTCTAATTTCTATGCCTGATGNTTCCTACCACCGCATCACTGAAAAGGATGAATTTGTCG 338
                      ********************* ************************************ *

consensus_9785#0      TGTTGGCAACTGATGGGGTGTGGGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGTCA 1260
consensus_9785#1      TGTTGGCAACTGATGGGGTGTGGGATGTACTTTCCAACTCAGAAGTTGTTAGCATTGNCA 398
                      ********************************************************* **

consensus_9785#0      GCCAAGCCAAGTCAGAAGCCTCAGCGGCACGATTTGTTGTTGAATCGGCTCAACGTGCAT 1320
consensus_9785#1      GCCAAGCCAAGTCAGAAGCCTCAGCGGCACGATTTGTTGTTGAATCAGCTCAACGTGCAT 458
                      ********************************************** *************

consensus_9785#0      GGAGAACACGGTTCCCCACATCAAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGA 1380
consensus_9785#1      GGAGAACACGGTTCCCCACATCAAAAATTGATGACTGCGCTGTTGTCTGCCTGTTCTTGA 518
                      ************************************************************

consensus_9785#0      ATACAGATGCTAGAAATAAACCCCCC-GGTTCAGGAATCAAAGATTTGGCCAATGCCATA 1439
consensus_9785#1      ATACAGATGCTAGAAATAAACCCCCCCGGTTCAGGAATCAAAGATTTGGCCAATGCCATA 578
                      ************************** *********************************

consensus_9785#0      GAACTGGGTGGTGGTAATCTTTCTTGACCATCAAA-TCAAGCACTAGGGCTCTTACCGAT 1498
consensus_9785#1      GAACTGNGTGGTGGTAATCTTTCTTGACCATCAAAATCAAGCACTAGGGCTCTTACCGAT 638
                      ****** **************************** ************************

consensus_9785#0      CTCGTTACTGCATTGGTAACAGGTGATGAGTGGCCTGTCC-TTGATGGTGTCTC--GAAA 1555
consensus_9785#1      CTCGTTACTGCATTGGTAACAGGTGATGAGTGGCCTGTCCCTTGATGGTGTCTTCGAAAA 698
                      **************************************** ************    ***

consensus_9785#0      AATCTGC-GATAGCCT-ACTTAAGTTGCAAGGGAAAGCATAAAATCCGTAC-TTGTCTAT 1612
consensus_9785#1      AATCTGCCGATAGCCTTACNTAAGTTGCAAGGGAAAGCATAAAATCCGTACCTTGGNTAT 758
                      ******* ******** ** ******************************* ***  ***

consensus_9785#0      GG-ATTAGGATAACCATTTTG-CCCAAGATTTGTGCAGCTTATTATACTTGC-AATGATT 1669
consensus_9785#1      GGGATTAGGATAACCATTTTGGCCCAAAATTTGNGCCGCTTATTNTACTTGCCAATGA-- 816
                      ** ****************** ***** ***** ** ******* ******* *****  

consensus_9785#0      CTTCTGCATGGGAAGACGGAGCCAGTTTACTTTGCTTGTTGGGGAGTGGTTGCTTGGTTT 1729
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      ATTCTGCACTGCAATTAGTGGTTCTAGGACCTCTGTTTCAGTTATTCTGTAAAGTATCAA 1789
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      ATCAGCTTAGTGCAAGTCTAAAGAAATTCAGTCTAGTGCTGTGGTATTATTACATTTTGT 1849
consensus_9785#1      ------------------------------------------------------------
                                                                                  

consensus_9785#0      TCATAATAATAGCGAAGATTTATATGTCAAACATAAAGG 1888
consensus_9785#1      ---------------------------------------
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)