cluster # 9794

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9794 cluster # 9794 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9794#0 length = 884 sequences # 6
consensusID : consensus_9794#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 884
fasta sequence
                              [TCTTTTTTTTAAC-CAGCTGCAATAAAATGCTTCAATACATTCCAGTTCTTACAAGATACAACAGATTCAGATGGAGTGCTGATATCCTACAAATATCATTTGGCATTTTGACTAACTGTACTATTTCTGACAACAGAGATACAGATACAAGGCCAATAGCTCCCATAGCTCAA-ACATAC-TTACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGGCAACCAACGAACCGAGCACGATGATCGCGGCGATCAGCAGGGTCTCGCCCCTGCCGCATCGCGTCAGGCCGAAGATCTT-GAGGTAGCAGATGCAGGGGAGCAGCATGGAGGCCATGACGCTGAGCAGCGAGCCGACGAGCGCCATGAGGTGGCCGAAGAAGGGCACCGTGAGGGCGATCACCACCGTGCTGACGACGATGAGGGTCCTGATCAGCACGTTGACGGACCTCTTGTTGCCGGCGAGCAGCTTCTCCTCGATCGCCGTCGCGACCGGGGTCACCATCAGGGCGTACTTGGAGAACGGGTTGATCAGCGTCGTGTAGATCGCCAGCTTCGAGCTGATCTTTCCCTCCGGGAGGTTCAGTGTCACCTGAGATTTGACGTCGTCGCCGTACATGAGGTAGCCGAGTATGGCCATGGATCCGTAGTTGACAGTGCACGCCACGAAGCATATGACCAGTACC]

[+] EMBL CB642164             [TCTTTTTTTTAAC CAGCTGCAATAAAATGCTTCAATACATTCCAGTTCTTACAAGATACAACAGATTCAGATGGAGTGCTGATATCCTACAAATATCATTTGGCATTTTGACTAACTGTACTATTTCTGACAACAGAGATACAGATACAAGGCCAATAGCTCCCATAGCTCAA ACATAC TTACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGGCAACCAACGAACCGAGCACGATGATCGCGGCGATCAGCAGGGTCTCGCCCCTGCCGCATCGCGTCAGGCCGAAGATCTT GAGGTAGCAGATGCAGGGGAGCAGCATGGAGGCCATGACGCTGAGCAGCGAGCCGACGAGCGCCATGAGGTGGCCGAAGAAGGGCACCGTGAGGGCGATCACCACCGTGCTGACGACGATGAGGGTCCTGATCAGCACGTTGACGGACCTCTTGTTGCCGGCGAGCAGCTTCTCCTCGATCGCCGTCGCGACCGGGGTCACCATCAGGGCGTACTTGGAGAACGGGTTGATCAGCGTCGTGTAGATCGCCAGCTTCGAGCTGATCTTTCCCTCCGGGAGGTTCAGTGTCACCTGA                                                                                          ]
[-] EMBL BM038865             [ttTTTTTTTTAACACAGCTGCAATAAAA GGTTCAATACATTCAAGTTCTTACAAGATACAACAGATTCAGATGGAGTGCTGATATCCTACAAATATCA TTGGCA TTTGACTAACTGTACTATTTCTGACAACAGAGATACAGATACAAGGGCAATAGCTCCCATAGCTCAAGACATACGTTACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGG AACCAACGAACCGAGCACGATGATCGCGG GATCAGCAGGGTCTCGCCCCTG CG ATCGCGTCAGGGCGAAGATCTTGGAGGgtancc                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB629946             [                      ATAAAATGCTTCAATACCTTTTAGTTCTTACAAGATACAACAGATTCAGATGGAGTGCTGATATCCTACAAATATCATTTGGCATTTTGACTAACTGTACTATTTCTGACAACAGAGATACAGATACAAGGCCAATAGCTCCCATAGCTCAA ACATAC TTACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGGCAACCAACGAACCGAGCACGATGATCGCGGCGATCAGCAGGGTCTCGCCCCTGCCGCATCGCGTCAGGCCGAAGATCTT GAGGTAGCAGATGCAGGGGAGCAGCATGGAGGCCATGACGCTGAGCAGCGAGCCGACGAGCGCCATGAGGTGGCCGAAGAAGGGCACCGTGAGGGCGATCACCACCGTGCTGACGACGATGAGGGTCCTGATCAGCACGTTGACGGACCTCTTGTTGCCGGCGAGCAGCTTCTCCTCGATCGCCGTCGCGACC                                                                                                                                                                                                ]
[-] EMBL CA999895             [                                                                                                                                                  TACAAGGCCAATAGCTCCCATAGCTCAA ACATAC TTACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGGCAACCAACGAACCGAGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB000123             [                                                                                                                                                                                                                            TGTACTACCTTCCCTCCACTACAGAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTCCGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAAAAGGTACCCGTCGCGGCAACCAACGAACCGAGCACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB629945             [                                                                                                                                                                                                                                                       tTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAATTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCATCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGGCAACCAACGAACCGAGCACGATGATCGCGGCGATCAGCAGGGTCTCGCCCCTGCCGCATCGCGTCAGGCCGAAGATCTT GAGGTAGCAGATGCAGGGGAGCAGCATGGAGGCCATGACGCTGAGCAGCGAGCCGACGAGCGCCATGAGGTGGCCGAAGAAGGGCACCGTGAGGGCGATCACCACCGTGCTGACGACGATGAGGGTCCTGATCAGCACGTTGACGGACCTCTTGTTGCCGGCGAGCAGCTTCTCCTCGATCGCCGTCGCGACCGGGGTCACCATCAGGGCGTACTTGGAGAACGGGTTGATCAGCGTCGTGTAGATCGCCAGCTTCGAGCTGATCTTTCCCTCCGGGAGGTTCAGTGTCACCTGAGATTTGACGTCGTCGCCGTACATGAGGTAGCCGAGTATGGCCATGGATCCGTAGTTGACAGTGCACGCCACGAAGCATATGACCAGTACC]




>consensus_9794#0
TCTTTTTTTTAACCAGCTGCAATAAAATGCTTCAATACATTCCAGTTCTTACAAGATACA
ACAGATTCAGATGGAGTGCTGATATCCTACAAATATCATTTGGCATTTTGACTAACTGTA
CTATTTCTGACAACAGAGATACAGATACAAGGCCAATAGCTCCCATAGCTCAAACATACT
TACGATCCCGAATTAAAGCACTCTAATCCTCGTTATCTGTACTACCTTGCCTCCACTACA
GAATCTCAGGATTTAATCAGATTACTCTGCTGACTGCTGACATTGAGGTACATTACGGAA
TTGCGTTGCTACAAAAACGTACACAAATTCGGACATCGGTGTTTCCATGCCTAATGTGCA
TCTCTTGACTTCAAAACTCATAGAAAATCTTCTTCAGAGAAGAGTACGTACCCGTCGCGG
CAACCAACGAACCGAGCACGATGATCGCGGCGATCAGCAGGGTCTCGCCCCTGCCGCATC
GCGTCAGGCCGAAGATCTTGAGGTAGCAGATGCAGGGGAGCAGCATGGAGGCCATGACGC
TGAGCAGCGAGCCGACGAGCGCCATGAGGTGGCCGAAGAAGGGCACCGTGAGGGCGATCA
CCACCGTGCTGACGACGATGAGGGTCCTGATCAGCACGTTGACGGACCTCTTGTTGCCGG
CGAGCAGCTTCTCCTCGATCGCCGTCGCGACCGGGGTCACCATCAGGGCGTACTTGGAGA
ACGGGTTGATCAGCGTCGTGTAGATCGCCAGCTTCGAGCTGATCTTTCCCTCCGGGAGGT
TCAGTGTCACCTGAGATTTGACGTCGTCGCCGTACATGAGGTAGCCGAGTATGGCCATGG
ATCCGTAGTTGACAGTGCACGCCACGAAGCATATGACCAGTACC
clustalw multiple alignements is not computed in this case