cluster # 9796

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Oryza sativa
cluster # 9796 cluster # 9796 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9796#0 length = 1698 sequences # 6
consensusID : consensus_9796#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1698
fasta sequence
                              [CCAAAGTACACATGCTCCATGGAAAATGGTTCTTGGTTGCTACAACTCAAAGGATTACCCGAGAGAATCTTGTTCTAGTGCATTCATGTTAGAACTGGAGTCTGTAAGACCTGAACCACAGGCTCCTTTGGAAGATTACAGGTTACATCTTGAGATTTTGCCTCTACAGTTGCATCTTGATCAAGGGCAACTTAACTTCCTTATCAGTTTCTTCCAGAATGACTTGTGCAACAACCCTAATTTGGCTTGCGAAAATGAGAATATTGACGCGCAGAGTACAATGTATCGAAGCGATACAATTGCTGATGAGGCATTACTTCCTTTCTTTCAGAAATTTGATGTGAAGCCTCTTGTTCTGCACATTAATTATATTCCTCGGCATTTTGATCCTGTTGCACTTAGCAAAGGAAATTATGCAGAACTTCTCAACATTTTTCCATGGAAGGGAATTGATTTGAAGCTGAAGCAGGTTTCTGCCATGGGTGTTTATGGTTTCAATAATATATGTGAAATAGTAGCTGCAGAATGGTTAGAGGACATCTCAAAAAATCAGGTCCATAAATTGTTAAAAGGGCTTCCACCTATAAAATCATTAGTTGCTGTGAGTTCAGGCACTAAGAAATTGGTCTCTTTACCCATAAAGAGCTATAAGAAGGATCGGAAGTTGCTCAAGGGAATGCAAAGAGGTGCGGTTGCTTTCATTAGAAGTGTTTCCATTGAAGCTGTGGGGCTTGGTGTACATTTGGCGGCAGGAGCTCATGATATGCTTCTAAAGACAGAAAGTGCCCTTACAGCAATTCCACCACCTTTAGCCTCACGTGAAGCAAAAAGAACCAAAGACAATGTAAGAGCTAACCAGCCTGAAAGTGCGCAAGAAGGGCTGAAGAAGGCATATGAAAGCTTGACCGATGGGTTTGGAAGGACTGCCTCTGCTTTGATTGGAAATCCTATTAAAGTTTATAATCGTGGGGCTGGTGCCGGATCAGCTTTGGCTACTGCAATCTGTGGAGCTCCAGGTGCTGCAGTGGCTCCATTATCAGCGTCTTTTCGTGCTGCACATTATACACTTCTTGGTATAAGGAATAGCCTTGATCCTGAACGCAAGAAAGAATCTATGTACAAATACCACGGGCCTCCTCAATTGTAGACTTCCATTGAGAAGAGGTGGTCTGTTCATTCTTTTGCGAGATCTCGTATTTACCTGGAAGAACTGG-TTC-AAGAGC--ACAT-GTGTGCAATCTCATCAAA---GGGTGGTGGGCA-AA-CTTGTAC-AGGATAAGTCAGATTTCCACACTAGCAATCCAACCA-TTTGTGAATCAGTGCCATCTCCGATGTTCTTGTTGGAGTTCATAATCCATC-TCCTCTGCAGGTGTACAGTTTCAGATGCCACGTCGAAAACCTTCATACTGTAAATTACTAGCACACGATCA-CGGTTGTAATCA-CAAACGTGGCCA-CCCGGAGCGGGTGGAAGTTTTGTTGACTCCTTGCTTAGGATTTGGCTAGAGAGAGAGGGTCA--CA-GGGAGCTTGGCTCGGTGGCTCTTGTACATAAA-T-TTGGTGGTGATTACTGAGTAGTGCAAATGTAAATA--TCTCTTG-TTCTCGGTTTTCCATTTACGTTTTTGTTGGTTTGAGAAACTGCTCA-CTGTAACTCTCACTCTACA-A-GTGTAAATATCATCAGGTTTTGTGCTGCTGCAA--AAAAAAAAAAAA]

[+] EMBL AK106597             [CCAAAGTACACATGCTCCATGGAAAATGGTTCTTGGTTGCTACAACTCAAAGGATTACCCGAGAGAATCTTGTTCTAGTGCATTCATGTTAGAACTGGAGTCTGTAAGACCTGAACCACAGGCTCCTTTGGAAGATTACAGGTTACATCTTGAGATTTTGCCTCTACAGTTGCATCTTGATCAAGGGCAACTTAACTTCCTTATCAGTTTCTTCCAGAATGACTTGTGCAACAACCCTAATTTGGCTTGCGAAAATGAGAATATTGACGCGCAGAGTACAATGTATCGAAGCGATACAATTGCTGATGAGGCATTACTTCCTTTCTTTCAGAAATTTGATGTGAAGCCTCTTGTTCTGCACATTAATTATATTCCTCGGCATTTTGATCCTGTTGCACTTAGCAAAGGAAATTATGCAGAACTTCTCAACATTTTTCCATGGAAGGGAATTGATTTGAAGCTGAAGCAGGTTTCTGCCATGGGTGTTTATGGTTTCAATAATATATGTGAAATAGTAGCTGCAGAATGGTTAGAGGACATCTCAAAAAATCAGGTCCATAAATTGTTAAAAGGGCTTCCACCTATAAAATCATTAGTTGCTGTGAGTTCAGGCACTAAGAAATTGGTCTCTTTACCCATAAAGAGCTATAAGAAGGATCGGAAGTTGCTCAAGGGAATGCAAAGAGGTGCGGTTGCTTTCATTAGAAGTGTTTCCATTGAAGCTGTGGGGCTTGGTGTACATTTGGCGGCAGGAGCTCATGATATGCTTCTAAAGACAGAAAGTGCCCTTACAGCAATTCCACCACCTTTAGCCTCACGTGAAGCAAAAAGAACCAAAGACAATGTAAGAGCTAACCAGCCTGAAAGTGCGCAAGAAGGGCTGAAGAAGGCATATGAAAGCTTGACCGATGGGTTTGGAAGGACTGCCTCTGCTTTGATTGGAAATCCTATTAAAGTTTATAATCGTGGGGCTGGTGCCGGATCAGCTTTGGCTACTGCAATCTGTGGAGCTCCAGGTGCTGCAGTGGCTCCATTATCAGCGTCTTTTCGTGCTGCACATTATACACTTCTTGGTATAAGGAATAGCCTTGATCCTGAACGCAAGAAAGAATCTATGTACAAATACCACGGGCCTCCTCAATTGTAGACTTCCATTGAGAAGAGGTGGTCTGTTCATTCTTTTGCGAGATCTCGTATTTACCTGGAAGAACTGG TTC AAGAGC  ACAT GTGTGCAATCTCATCAAA   GGGTGGTGGGCA AA CTTGTAC AGGATAAGTCAGATTTCCACACTAGCAATCCAACCA TTTGTGAATCAGTGCCATCTCCGATGTTCTTGTTGGAGTTCATAATCCATC TCCTCTGCAGGTGTACAGTTTCAGATGCCACGTCGAAAACCTTCATACTGTAAATTACTAGCACACGATCA CGGTTGTAATCA CAAACGTGGCCA CCCGGAGCGGGTGGAAGTTTTGTTGACTCCTTGCTTAGGATTTGGCTAGAGAGAGAGGGTCA  CA GGGAGCTTGGCTCGGTGGCTCTTGTACATAAA T TTGGTGGTGATTACTGAGTAGTGCAAATGTAAATATCTCTCTTGTTTCTCGGTTTTCCATTTACGTTTTTGTTGGTTTGAGAAACTGCTCA CTGTAACTCTCACTCTACA A GTGTAAATATCATCAGGTTTT                          ]
[+] EMBL CF196564             [                                                                                                                                                                                                                                                                                                                                           AAATTTGATGTGAAGCCTCTTGTTCTGCACATTAATTATATTCCTCGGCATTTTGATCCTGTTGCACTTAGCAAAGGAAATTATGCAGAACTTCTCAACATTTTTCCATGGAAGGGAATTGATTTAAAGCTGAAGCAGGTTTCTGCCATGGGTGTTTATGGTTTCAATAATATATGTGAAATAGTAGCTGCAGAATGGTTAGAGGACATCTCAAAAAATCAGGTCCATAAATTGTTAAAAGGGCTTCCACCTATAAAATCATTAGTTGCTGTGAGTTCAGGCACTAAGAAATTGGTCTCTTTACCCATAAAGAGCTATAAGAAGGATCGGAAGTTGCTCAAGGGAATGCAAAGAGGTGCGGTTGCTTTCATTAGAAGTGTTTCCATTGAAGCTGTGGGGCTTGGTGTACATTTGGCGGCAGGAGCTCATGATATGCTTCTAAAGACAGAAAGTGCCCTTACAGCAATTCCACCACCTTTAGCCTCACGTGAAGCAAAAAGAACCAAAGACAATGTAAGAGCTAACCAGCCTGAAAGTGCGCAAGNNNNGCTGANNNNNNCATATGNNNGCTNGANNGATGGGTTTGnnn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB666877             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGGCATATGAAAGCTTGACCGATGGGTTTGGAAGGACTGCCTCTGCTTTGATTGGAAATCCTATTAAAGTTTATAATCGTGGGGCTGGTGCCGGATCAGCTTTGGCTACTGCAATCTGTGGAGCTCCAGGTGCTGCAGTGGCTCCATTATCAGCGTCTTTTCGTGCTGCACATTATACACTTCTTGGTATAAGGAATAGCCTTGATCCTGAACGCAAGAAAGAATCTATGTACAAATACCACGGGCCTCCTCAATTGTAGACTTCCATTGAGAAGAGGTGGTCTGTTCATTCTTTTGCGAGATCTCGTATTTACCTGGAAGAACTGG TTC AAGAGC  ACAT GTGTGCAATCTCATCAAA   GGGTGGTGGGCA AA CTTGTAC AGGATAAGTCAGATTTCCACACTAGCAATCCAACCA TTTGTGAATCAGTGCCATCTCCGATGTTCTTGTTGGAGTTCATAATCCATC TCCTCTGCAGGTGTACAGTTTCAGATGCCACGTCGAAAACCTTCATACTGTAAATTACTAGCACACGATCA CGGTTGTAATCA CAAACGTGGCCA CCCGGAGCGGGTGGAAGTTTTGTTGACTCCTTGCTTAGGATTTGGCTAGAGAGAGAGGGTCA  CA GGGAGCTTGGCTCGGTGGCTCTTGTACATAAA T TTGGTGGTGATTACTGAGTAGTGCAAATGTAAATATCTCTCTTGTTTCTCGGTTTTCCATTTACGTTTTTGTTGGTTTGAGAAACTGCTCA CTGTAACTCTCACTCTACA A GTGTAAATATCATCAGGTTTTGTGCTGCTGCAA  AAAAAAAga   ]
[+] EMBL BM038898             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCTGGAAGAACTGGTTTCAAAGAGCCAACATGGTGTGCCATCTCATCAAAAAGGGGTGGTGGCCACAACCTTGTAC AGGATAAGTCAGATTTCCACACTAGCAATCCAACCACTTTGTGAATCAGTGCCATCTCCGATGTTCTTGTTGGAGTTCATAATCCATC TCCTCTGCAGGTGTACAGTTTCAGATGCCACGTCGAAAACCTTCATACTGTAAATTACTAGCACACGATCACCGGTTGTAATCA CCAACGTGGCCACCCCGGAGCGGGTGGAAGTTTTGTTGACTCCTTGCTTAGGATTTGGCTAGAGAGAGAGGGTCACNCACGGGAGCTTGGCTCGGTGGCTCTTGTACATAAACTCTTGGTGCTGATTACTGAGTAGTGCNAATGTAAATA  TCTCTTG TTCTCGGTTTTCCATTTACGTTTTTGTTGGTTTGAGAAACTGCTCACCTGTAACTCTCACTCTACACA GTGTAAATATCATCCGGTTTTGTGCTGCTGCAA  AAAAAAAA    ]
[+] EMBL BQ906759             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCAAA    GGTGGTGGCCA AA CTTGTACAAGGATAAGTCAGATTTCCACACTAGCAATCCAACCA TTTGTGAATCAGTGCCATCTCCGATGTTCTTGTTGGAGTTCATAATCCATC TCCTCTGCAGGTGTACAGTTTCAGATGCCACGTCGAAAACCTTCATACTGTAAATTACTAGCACACGATCA CGGTTGTAATCA CAAACGTGGCCA CCCGGAGCGGGTGGAAGTTTTGTTGACTCCTTGCTTAGGATTTGGCTAGAGAGAGAGGGTCA  CA GGGAGCTTGGCTCGGTGGCTCTTGTACATAAA T TTGGTGGTGATTACTGAGTAGTGCAAATGTAAATA  TCTCTTG TTCTCGGTTTTCCATTTACGTTTTTGTTGGTTTGAGAAACTGCTCA CTGTAACTCTCACTCTACA A GTGTAAATATCATCAGGTTTTGTGCTGCTGCAATGAGATAAAAAAA ]
[+] EMBL BM419703             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCATCTCCGATGTTCTTGTTGGAGTTCATAATCCATCGTCCTCTGCAGGTGTACAGTTTCAGATGCCACGTCGAAAACCTTCATACTGTAAATTACTAGCACACGATCACCGGTTGTAATCACCAAACGTGGCCC CCCGGAGCGGGTGGAAGTTTTGTTGACTCCTTGCTTAGGATTTGGCTAGAGAGAGAGGGTCA  CA GGGAGCTTGGCTCGGTGGCTCTTGTACATAAA T TTGGTGGTGATTACTGAGTAGTGCCAATGTAAATA  TCTCTTG TTCTCGGTTTTCCATTTACGTTTTTGTTGGTTTGAGAAACTGCTCA CTGTAACTCTCACTCTACA AGGTGTAAATATCATCAGGTTTTGTGCTGCTGCAATGAGAAAAAAAAAA]




>consensus_9796#0
CCAAAGTACACATGCTCCATGGAAAATGGTTCTTGGTTGCTACAACTCAAAGGATTACCC
GAGAGAATCTTGTTCTAGTGCATTCATGTTAGAACTGGAGTCTGTAAGACCTGAACCACA
GGCTCCTTTGGAAGATTACAGGTTACATCTTGAGATTTTGCCTCTACAGTTGCATCTTGA
TCAAGGGCAACTTAACTTCCTTATCAGTTTCTTCCAGAATGACTTGTGCAACAACCCTAA
TTTGGCTTGCGAAAATGAGAATATTGACGCGCAGAGTACAATGTATCGAAGCGATACAAT
TGCTGATGAGGCATTACTTCCTTTCTTTCAGAAATTTGATGTGAAGCCTCTTGTTCTGCA
CATTAATTATATTCCTCGGCATTTTGATCCTGTTGCACTTAGCAAAGGAAATTATGCAGA
ACTTCTCAACATTTTTCCATGGAAGGGAATTGATTTGAAGCTGAAGCAGGTTTCTGCCAT
GGGTGTTTATGGTTTCAATAATATATGTGAAATAGTAGCTGCAGAATGGTTAGAGGACAT
CTCAAAAAATCAGGTCCATAAATTGTTAAAAGGGCTTCCACCTATAAAATCATTAGTTGC
TGTGAGTTCAGGCACTAAGAAATTGGTCTCTTTACCCATAAAGAGCTATAAGAAGGATCG
GAAGTTGCTCAAGGGAATGCAAAGAGGTGCGGTTGCTTTCATTAGAAGTGTTTCCATTGA
AGCTGTGGGGCTTGGTGTACATTTGGCGGCAGGAGCTCATGATATGCTTCTAAAGACAGA
AAGTGCCCTTACAGCAATTCCACCACCTTTAGCCTCACGTGAAGCAAAAAGAACCAAAGA
CAATGTAAGAGCTAACCAGCCTGAAAGTGCGCAAGAAGGGCTGAAGAAGGCATATGAAAG
CTTGACCGATGGGTTTGGAAGGACTGCCTCTGCTTTGATTGGAAATCCTATTAAAGTTTA
TAATCGTGGGGCTGGTGCCGGATCAGCTTTGGCTACTGCAATCTGTGGAGCTCCAGGTGC
TGCAGTGGCTCCATTATCAGCGTCTTTTCGTGCTGCACATTATACACTTCTTGGTATAAG
GAATAGCCTTGATCCTGAACGCAAGAAAGAATCTATGTACAAATACCACGGGCCTCCTCA
ATTGTAGACTTCCATTGAGAAGAGGTGGTCTGTTCATTCTTTTGCGAGATCTCGTATTTA
CCTGGAAGAACTGGTTCAAGAGCACATGTGTGCAATCTCATCAAAGGGTGGTGGGCAAAC
TTGTACAGGATAAGTCAGATTTCCACACTAGCAATCCAACCATTTGTGAATCAGTGCCAT
CTCCGATGTTCTTGTTGGAGTTCATAATCCATCTCCTCTGCAGGTGTACAGTTTCAGATG
CCACGTCGAAAACCTTCATACTGTAAATTACTAGCACACGATCACGGTTGTAATCACAAA
CGTGGCCACCCGGAGCGGGTGGAAGTTTTGTTGACTCCTTGCTTAGGATTTGGCTAGAGA
GAGAGGGTCACAGGGAGCTTGGCTCGGTGGCTCTTGTACATAAATTTGGTGGTGATTACT
GAGTAGTGCAAATGTAAATATCTCTTGTTCTCGGTTTTCCATTTACGTTTTTGTTGGTTT
GAGAAACTGCTCACTGTAACTCTCACTCTACAAGTGTAAATATCATCAGGTTTTGTGCTG
CTGCAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case