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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9838#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1211 fasta sequence
[ACTCACCAACTCCTCCCAACCAAACCACCACAATCCTCTGAATCTCACTCACTTCAAACCCATCCAGAATCCCAGATTCACAATTCTGCAGGAGCCACCACAGCATTCCGAAAATCCATTTTTTTGACAAATTCGTTCCTTTTCTTTTTCAAACAGTGAGCTTTGGGATGAAAACAAAGTCATATTATCTGCAGCATCGCATCGGCATCATATTTTTCTTTTTCTTTTTTTGTTGTTGGGATTGATTTATGACATCACATCTGGCGTTGATGTCGTGCCTGCTGGTGCTGCTCCTCTCCCTCGACAAGTTCCTCCTCCACTACCTCAAGAAGCGCTGGCTCTCCCCGAGGATCTCGACTTCCCCGTCCAAATCGCGGCGATCCATGGCGGCGGCGGCGGCGGGCGGCGGTGGCGCCAAGTGGAGCGAGACGGCCATGCTCGTCATCGACATGCAGAAGGATTTCGTTGACCCGGCGATGCGGAGCCCGATGCTGGTGGATGGCGGCCAGG-CGGTGGTCCCCACCGTCGCCGAGGCGGTCGCCGTCGCGAGGGAGCGCGGCATCTACGTCGTCT-GGGTGGTCAGAGAGCATGACCCTTCTGGAGCAGATGTTGAAATTTTTCGGAGACGCTATTATTCTGGT-GGGAAGGGCCCAACAGTGAAAGGTTTGAAAGGTGCTGATCTAGCTGATGGGCTTGTTATCAAAGAAGGGGAATACAAGTTGGTGAAGACAAGGTTCAGTGCTTTCTTTGCGACACCCCTTGATTCTGTCCTCAAAACCTCAGGAATAAAGAAATTGGTTATCGTTGGGGTTCAAACACCAAATTGCATCCGGCAGACAGTCTTTGATGCTGTAGCATTGGACTATGAGAAAGTGACAGTCATTATTGATGCAACAGCTGCTGCTAGGCCAGAGATCCATCTGTCAAATATAAGAGATATGAAGAATATCGGAGTGGAAACACCAACCTTGGAAGAATGGCGACGATAAAATTGCTGTTTCTAGTGATATACTACATGCTCAACTCCAAAGTATTGGAGACATCCCTGTTCCTTTCCATCTCAGT-GGGTGTAATTAT-ATTAACCTTATGTCAGGTAGA-CCAA-CAGCAGATACT-GTTTATATATATATATATATTCAACTGTACAACTCCTAACCATTCCTATATAAAATTGATCATATTGGGATTACTGCTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU176537 [ACTCACCAACTCCTCCCAACCAAACCACCACAATCCTCTGAATCTCACTCACTTCAAACCCATCCAGAATCCCAGATTCACAATTCTGCAGGAGCCACCACAGCATTCCGAAAATCCATTTTTTTGACAAATTCGTTCCTTTTCTTTTTCAAACAGTGAGCTTTGGGATGAAAACAAAGTCATATTATCTGCAGCATCGCATCGGCATCATATTTTTCTTTTTCTTTTTTTGTTGTTGGGATTGATTTATGACATCACATCTGGCGTTGATGTCGTGCCTGCTGGTGCTGCTCCTCTCCCTCGACAAGTTCCTCCTCCACTACCTCAAGAAGCGCTGGCTCTCCCCGAGGATCTCGACTTCCCCGTCCAAATCGCGGCGATCCATGGCGGCGGCGGCGGCGGGCGGCGGTGGCGCCAAGTGGAGCGAGACGGCCATGCTCGTCATCGACATGCAGAAGGATTTCGTTGACCCGGCGATGCGGAGCCCGATGCTGGTGGATGGCGGCCAGG CGGTGGTCCCCACCGTCGCCGAGGCGGTCGCCGTCGCGAGGGAGCGCGGCATCTACGTCGTCT GGGTGGTCAGAGAGCATGACCCTTCTGGAGCAGATGTTGAAATTTTTC ]
[+] EMBL AK100588 [ GTGCTGCTCCTCTCCCTCGACAAGTTCCTCCTCCACTACCTCAAGAAGCGCTGGCTCTCCCCGAGGATCTCGACTTCCCCGTCCAAATCGCGGCGATCCATGGCGGCGGCGGCGGCGGGCGGCGGTGGCGCCAAGTGGAGCGAGACGGCCATGCTCGTCATCGACATGCAGAAGGATTTCGTTGACCCGGCGATGCGGAGCCCGATGCTGGTGGATGGCGGCCAGG CGGTGGTCCCCACCGTCGCCGAGGCGGTCGCCGTCGCGAGGGAGCGCGGCATCTACGTCGTCT GGGTGGTCAGAGAGCATGACCCTTCTGGAGCAGATGTTGAAATTTTTCGGAGACGCTATTATTCTGGT GGGAAGGGCCCAACAGTGAAAGGTTTGAAAGGTGCTGATCTAGCTGATGGGCTTGTTATCAAAGAAGGGGAATACAAGTTGGTGAAGACAAGGTTCAGTGCTTTCTTTGCGACACCCCTTGATTCTGTCCTCAAAACCTCAGGAATAAAGAAATTGGTTATCGTTGGGGTTCAAACACCAAATTGCATCCGGCAGACAGTCTTTGATGCTGTAGCATTGGACTATGAGAAAGTGACAGTCATTATTGATGCAACAGCTGCTGCTAGGCCAGAGATCCATCTGTCAAATATAAGAGATATGAAGAATATCGGAGTGGAAACACCAACCTTGGAAGAATGGCGACGATAAAATTGCTGTTTCTAGTGATATACTACATGCTCAACTCCAAAGTATTGGAGACATCCCTGTTCCTTTCCATCTCAGT GGGTGTAATTAT ATTAACCTTATGTCAGGTAGA CCAA CAGCAGATACT GTTTATATATATATATATATTCAACTGTACAACTCCTAACCATTCCTATATAAAATTGATCATATTGG ]
[+] EMBL CF336136 [ GTTCCTCCTCCACTACCTCAAGAAGCGCTGGCTCTCCCCGAGGATCTCGACTTCCCCGTCCAAATCGCGGCGATCCATGGCGGCGGCGGCGGCGGGCGGCGGTGGCGCCAAGTGGAGCGAGACGGCCATGCTCGTCATCGACATGCAGAAGGATTTCGTTGACCCGGCGATGCGGAGCCCGATGCTGGTGGATGGCGG CAGGCCGGTGGTCCCCACCGTCGCCGAGGCGGTCGCCGTCGCGAGGGAGCGCGGCATCTACGTCGTCTGGGGTGGTCAGAGAGCATGACCCTTCTGGAGCAGATGTTGAAATTTTTCGGAGACGCTATTATTCTGGTGGGGAAGGGCCCAACAGTGAAAGGTTTGAAAGGTGCTGATCTAGCTGATGGGCTTGTTAT AAAGAAGGGGAATACAA ]
[+] EMBL AU070560 [ AGCGAGACGGCCATGCTCGTCATCGACATGCAGAAGGATTTCGTTGACCCGGCGATGCGGA CCCGATGCTGGTGGATGGCGGCCAGG CGGTGGTCCCCACCGTCGCCGAGGCGGTCGCCGTCGCGAGGGAGCGCGGCATCTACGTCGTCT GGGTGGTCAGAGAGCATGACCCTTCTGGAGCAGATGTTGAAATTTTTCGGAGACGCTATTATTCTGGT GGGAAGGGCCCAACAGTGAAAGGTTTGAAAGGTGCTGATCTAGCTGATGGGCTTGTTATCAAAGAAGGGGAATACAAGTTGGTGAAGACAAGGTTCAGTGCTTTCTTTGCGACACCCCTTGATTCTGTCCTCAAAACCTCAGGAATAAAGAAATTGGTTATCGTTGGGGTTCAAACACCAAATTGCATCCGGCAGACAGTCTTTGATGCTGTAGCATTGGACTATGAGAAAGTGACAGTCATTATTGATGCAACAGCTGCTGCTAGGCCAGAGATCCATCTGTCAAATATAAGAGATATGAAGAATATCGGAGTGGAAACACCAACCTTGGAAGAATGGCGACGATAAAATTGCTGTTTCTAGTGNTATACTACATGCTCAACTCCAAAGTATTNGAGANATCCCTGTTTCTTTCCATCTCAGTGGGGTGTAATTATAATTAACCTTATGTCAGGTAGACCCAACCAGCAGATACTGGTTTAanat ]
[+] EMBL AU174055 [ ACCCTTCTGGAGCAGATGTTGAAATTTTTCGGAGACGCTATTATTCTGGT GGGAAGGGCCCAACAGTGAAAGGTTTGAAAGGTGCTGATCTAGCTGATGGGCTTGTTATCAAAGAAGGGGAATACAAGTTGGTGAAGACAAGGTTCAGTGCTTTCTTTGCGACACCCCTTGATTCTGTCCTCAAAACCTCAGGAATAAAGAAATTGGTTATCGTTGGGGTTCAAACACCAAATTGCATCCGGCAGACAGTCTTTGATGCTGTAGCATTGGACTATGAGAAAGTGACAGTCATTATTGATGCAACAGCTGCTGCTAGGCCAGAGATCCATCTGTCAAATATAAGAGATATGAAGAATATCGGAGTGGAAACACCAACCTTGGAAGAATGGCGACGATAAAATTGCTGTTTCTAGTGATATACTACATGCTCAACTCCAAAGTAT ]
[+] EMBL AU174056 [ TCTGTCCTCAAAACCTCAGGAATAAAGAAATTGGTTATCGTTGGGGTTCAAACACCAAATTGCATCCGGCAGACAGTCTTTGATGCTGTAGCATTGGACTATGAGAAAGTGACAGTCATTATTGATGCAACAGCTGCTGCTAGGCCAGAGATCCATCTGTCAAATATAAGAGATATGAAGAATATCGGAGTGGAAACACCAACCTTGGAAGAATGGCGACGATAAAATTGCTGTTTCTAGTGATATACTACATGCTCAACTCCAAAGTATTGGAGACATCCCTGTTCCTTTCCATCTCAGT GGGTGTAATTAT ATTAACCTTATGTCAGGTAGA CCAA CAGCAGATACT GTTTATATATATATATATATTCAACTGTACAACTCCTAACCATTCCTATATAAAATTGATCATATTGGGATTACTGCTAAAAAAAAA ]
[+] EMBL AU097321 [ TGGAAACACCAACCTTGGAAGAATGGCGACGATAAAATTGCTGTTTCTAGTGATATACTACATGCTCAACTCCAAAGTATTGGAGACATCCCTGTTCCTTTCCATCTCAGT GGGTGTAATTAT ATTANCCTTATGTCAGGTAGA CCAA CAGCAGATACT GTTTATATATATATATATATTCAACTGTACAACTCCTAACCATTCCTATATAAAATTGATCATATTGGGATTACTGCTAAAAAAAAAAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||