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Oryza sativa
cluster # 9844 cluster # 9844       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9844#0 length = 1743 sequences # 6  
consensus_9844#1 length = 762 sequences # 1  

consensusID : consensus_9844#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1743
fasta sequence
                              [GTCTCACTCTCTCTGTCTCGCGGTTCTCGCCTCCTCCTCCTCTCTTTCCTTTTTCCTCTCTCTGCTCCTCGTTGTTGCAGTCACCTCTCCTCTCCTTGTTCTTGCAGTCAGCTCAGCTCCGGACGCAG-CACCAGTTTTCTCGGA-GTGCCATCAGCTCGCGGGAGAGTTGCCGGAAGAGAAGCTCGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGGTGCGCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCAGCCTCTCAGGCAGGCACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATACGCGATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAGAAATTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAATGCGGCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTGGACTATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGCCATCCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTCCTTGCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGATTCACAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGATTTGTTCATTCAAGACACTGAATTGTGCAATAAGCAAACCCTCGATTCAGGTTTCCTTGGCAGCAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAGCACTGCCAATTTAAAGGTTTATACAACACCAAAACAGATCGGTTTCGATGGGAAGTGCAAACAAAAGAATACCGAGAGAGGCCGATTTTGGAGGATCTTATCAACAAATGAGCAATATCTGACTTATATTGGGGCACTAGTGACACTACAACTGTTTTTACAACTGAGCAGAGCGAACATTACCACTCTGCTCCTGCCAATGCTATATCAGACAACAAGCTCCCAGCGCAATGCTGCAGTTGTCGGTAACATCGTGATTGTTTTGGTGAACTCCTTTGGCATTCTTGGGTCTGACTTCACAACAAAGCACCACGGACGGGAGGTCACATTCACCGTGAGCGCCATTCTGATGGTGTTTTGCCAGATCACAATCCCATTGCTTGTGGAAGCGCAAATCGGGCTGGGCGGTGGAACTCGGATACTGACGGGCTACACCACGGCGACATTCCTGCTCACATGCGTCGTCTCCTATGGTCTCAGCTGGTCATGGGGCTCATTGTTCTGCACTATTCCTGGTATGAAGATTCAGTCAGCTGGGCAGGTTATCGGCATGGGTCTCTGTTTCGGGCTCTGCTTCGTGCAAATGCAGTACTTCCTGCTGATGCTGTGCCGGCTGAAGAACGCCATCCTTGCATACTACGCAATGTGGATTTGGTCTTGATTTAAACTAGGATCTCAAGAGAAGAGATGGGACAGATGGCTAGATGTCTGCCCGTTTTACTGCTAGCGTTTGATGGATGTAAATATGCTCATTTTCTTTGCCTGTTCTGTACAGTTTTTGTATTGGTTGCTATCTCAGTGTAGATTCTCCCAAGCAGTTTCTGCGACTATGAGGCAA-TTAACAATGTTATGCTAAAA]

[+] EMBL AK065365             [GTCTCACTCTCTCTGTCTCGCGGTTCTCGCCTCCTCCTCCTCTCTTTCCTTTTTCCTCTCTCTGCTCCTCGTTGTTGCAGTCACCTCTCCTCTCCTTGTTCTTGCAGTCAGCTCAGCTCCGGACGCAG CACCAGTTTTCTTGGA GTGCCATCAGCTCGCGGGAGAGTTGCCGGAAGAGAAGCTCGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGGTGCGCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCAGCCTCTCAGGCAGGCACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATACGCGATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAGAAATTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAATGCGGCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTGGACTATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGCCATCCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTCCTTGCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGATTCACAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGATTTGTTCATTCAAGACACTGAATTGTGCAATAAGCAAGCCCTCGATTCAGGTTTCCTTGGCAGCAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAGCACTGCCAATTTAAAGGTTTATACAACACCAAAACAGATCGGTTTCGATGGGAAGTGCAAACAAAAGAATACCGAGAGAGGCCGATTTTGGAGGATCTTATCAACAAATGAGCAATATCTGACTTATATTGGGGCACTAGTGACACTACAACTGTTTTTACAACTGAGCAGAGCGAACATTACCACTCTGCTCCTGCCAATGCTATATCAGACAACAAGCTCCCAGCGCAATGCTGCAGTTGTCGGTAACATCGTGATTGTTTTGGTGAACTCCTTTGGCATTCTTGGGTCTGACTTCACAACAAAGCACCACGGACGGGAGGTCACATTCACCGTGAGCGCCATTCTGATGGTGTTTTGCCAGATCACAATCCCATTGCTTGTGGAAGCGCAAATCGGGCTGGGCGGTGGAACTCGGATACTGACGGGCTACACCACGGCGACATTCCTGCTCACATGCGTCGTCTCCTATGGTCTCAGCTGGTCATGGGGCTCATTGTTCTGCACTATTCCTGGTATGAAGATTCAGTCAGCTGGGCAGGTTATCGGCATGGGTCTCTGTTTCGGGCTCTGCTTCGTGCAAATGCAGTACTTCCTGCTGATGCTGTGCCGGCTGAAGAACGCCATCCTTGCATACTACGCAATGTGGATTTGGTCTTGATTTAAACTAGGATCTCAAGAGAAGAGATGGGACAGATGGCTAGATGTCTGCCCGTTTTACTGCTAGCGTTTGATGGATGTAAATATGCTCATTTTCTTTGCCTGTTCTGTACAGTTTTTGTATTGGTTGCTATCTCAGTGTAGATTCTCCCAAGCAGTTTCTGCGACTATGAGGCAA TTAACA              ]
[+] EMBL CF308441             [  CTCACTCTCTCTGTCTCGCGGTTCTCGCCTCCTCCTCCTCTCTTTCCTTTTTCCTCTCTCTGCTCCTCGTTGTTGCAGTCACCTCTCCTCTCCTTGTTCTTGCAGTCAGCTCAGCTCCGGACGCAG CACCAGTTTTCTCGGA GTGCCATCAGCTCGCGGGAGAGTTGCCGGAAGAGAAGCTCGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGGTGCGCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCAGCCTCTCAGGCAGGCACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATACGCGATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAGAAATTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAATGCGGCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTGGACTATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGCCATCCAGGGCGCACCAATTTATTGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK103980             [                                                                                                       GCAGTCAGCTCAGCTCCGGACGCAG CACCAGTTTTCTCGGA GTGCCATCAGCTCGCGGGAGAGTTGCCGGAAGAGAAGCTCGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGGTGCGCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCAGCCTCTCAGGCAGGCACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATACGCGATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAGAAATTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAATGCGGCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTGGACTATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGCCATCCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTCCTTGCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGATTCACAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGATTTGTTCATTCAAGACACTGAATTGTGCAATAAGCAAACCCTCGATTCAGGTTTCCTTGGCAGCAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAGCACTGCCAATTTAAAGGTTTATACAACACCAAAACAGATCGGTTTCGATGGGAAGTGCAAACAAAAGAATACCGAGAGAGGCCGATTTTGGAGGATCTTATCAACAAATGAGCAATATCTGACTTATATTGGGGCACTAGTGACACTACAACTGTTTTTACAACTGAGCAGAGCGAACATTACCACTCTGCTCCTGCCAATGCTATATCAGACAACAAGCTCCCAGCGCAATGCTGCAGTTGTCGGTAACATCGTGATTGTTTTGGTGAACTCCTTTGGCATTCTTGGGTCTGACTTCACAACAAAGCACCACGGACGGGAGGTCACATTCACCGTGAGCGCCATTCTGATGGTGTTTTGCCAGATCACAATCCCATTGCTTGTGGAAGCGCAAATCGGGCTGGGCGGTGGAACTCGGATACTGACGGGCTACACCACGGCGACATTCCTGCTCACATGCGTCGTCTCCTATGGTCTCAGCTGGTCATGGGGCTCATTGTTCTGCACTATTCCTGGTATGAAGATTCAGTCAGCTGGGCAGGTTATCGGCATGGGTCTCTGTTTCGGGCTCTGCTTCGTGCAAATGCAGTACTTCCTGCTGATGCTGTGCCGGCTGAAGAACGCCATCCTTGCATACTACGCAATGTGGATTTGGTCTTGATTTAAACTAGGATCTCAAGAGAAGAGATGGGACAGATGGCTAGATGTCTGCCCGTTTTACTGCTAGCGTTTGATGGATGTAAATATGCTCATTTTCTTTGCCTGTTCTGTACAGTTTTTGTATTGGTTGCTATCTCAGTGTAGATTCTCCCAAGCAGTTTCTGCGACTATGAGGCAA TTAACAA             ]
[+] EMBL CB669988             [                                                                                                                            GCAGTCACCTCTGCTC CGGACGCAGCACCAGCTCGCGGGAGAGTTGCCGGAAGAGAAGCTCGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGGTGCGCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCAGCCTCTCAGGCAGGCACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATACGCGATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAGAAATTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAATGCGGCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTGGACTATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGCCATCCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTCCTTGCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGATTCACAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGATTTGTTCATTCAAGACACTGAATTGTGCAATAAGCAAACCCTCGATTCAGGTTTCCTTGGCAGCAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAGCACTGCCAATTTAAAGGTTTATACAACACCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK059863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGATGGTTACTGCAGAAGTTTTCTGCCATCCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTCCTTGCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGATTCACAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGATTTGTTCATTCAAGACACTGAATTGTGCAATAAGCAAACCCTCGATTCAGGTTTCCTTGGCAGCAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAGCACTGCCAATTTAAAGGTTTATACAACACCAAAACAGATCGGTTTCGATGGGAAGTGCAAACAAAAGAATACCGAGAGAGGCCGATTTTGGAGGATCTTATCAACAAATGAGCAATATCTGACTTATATTGGGGCACTAGTGACACTACAACTGTTTTTACAACTGAGCAGAGCGAACATTACCACTCTGCTCCTGCCAATGCTATATCAGACAACAAGCTCCCAGCGCAATGCTGCAGTTGTCGGTAACATCGTGATTGTTTT TTGAACTCCTTTGGCATTCTTGGGTCTGACTTCACAACAAAGCACCACGGACGGGAGGTCACATTCACCGTGAGCGCCATTCTGATGGTGTTTTGCCAGATCACAATCCCATTGCTTGTGGAAGCGCAAATCGGGCTGGGCGGTGGAACTCGGATACTGACGGGCTACACCACGGCGACATTCCTGCTCACATGCGTCGTCTCCTATGGTCTCAGCTGGTCATGGGGCTCATTGTTCTGCACTATTCCTGGTATGAAGATTCAGTCAGCTGGGCAGGTTATCGGCATGGGTCTCTGTTTCGGGCTCTGCTTCGTGCAAATGCAGTACTTCCTGCTGATGCTGTGCCGGCTGAAGAACGCCATCCTTGCATACTACGCAATGTGGATTTGGTCTTGATTTAAACTAGGATCTCAAGAGAAGAGATGGGACAGATGGCTAGATGTCTGCCCGTTTTACTGCTAGCGTTTGATGGATGTAAATATGCTCATTTTCTTTGCCTGTTCTGTACAGTTTTTGTATTGGTTGCTATCTCAGTGTAGATTCTCCCAAGCAGTTTCTGCGACTATGAGGCAA TT                  ]
[+] EMBL BQ908305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCGACATTCCTGCTCACATGCATCGTCTCCTATGGTCTCAGCTGGTCATGGGGCTCATTGTTCTGCACTATTCCTGGTATGAAGATTCAGTCAGCTGGGCAGGTTATCGGCATGGGTCTCAGTTTCGGACTCTGCTTCGTGCAAATGCAGTACTTCCTGCTGATGCTGTGTCGGCTGAAGAACGCCATCCTTGCATACTACGCAATGTGGATTTGGTCTTGATTTAAACTAGGATCTCAAGAGAAGAGATGGGATAGATGGCTAGATATCTGCCCGTTTAACTGCTAGCGTTTGATGGATGTAAATATGCTCATTTTC TTGCCTGTTCTGTACAGTTTTTTTATTGGTTGCTATTTCAGTGTAGATTCTCCCAACCAGTTTCTGCGACTATGAGGCAATTTAACAATGTTATGCTAAAA]


>consensus_9844#0 GTCTCACTCTCTCTGTCTCGCGGTTCTCGCCTCCTCCTCCTCTCTTTCCTTTTTCCTCTC TCTGCTCCTCGTTGTTGCAGTCACCTCTCCTCTCCTTGTTCTTGCAGTCAGCTCAGCTCC GGACGCAGCACCAGTTTTCTCGGAGTGCCATCAGCTCGCGGGAGAGTTGCCGGAAGAGAA GCTCGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGG TGCGCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCAGCCTCTCAGGCA GGCACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATA CGCGATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAG AAATTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAAT GCGGCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTG GACTATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGC CATCCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTC CTTGCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGAT TCACAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGA TTTGTTCATTCAAGACACTGAATTGTGCAATAAGCAAACCCTCGATTCAGGTTTCCTTGG CAGCAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAGCACTGCCAATTTAAA GGTTTATACAACACCAAAACAGATCGGTTTCGATGGGAAGTGCAAACAAAAGAATACCGA GAGAGGCCGATTTTGGAGGATCTTATCAACAAATGAGCAATATCTGACTTATATTGGGGC ACTAGTGACACTACAACTGTTTTTACAACTGAGCAGAGCGAACATTACCACTCTGCTCCT GCCAATGCTATATCAGACAACAAGCTCCCAGCGCAATGCTGCAGTTGTCGGTAACATCGT GATTGTTTTGGTGAACTCCTTTGGCATTCTTGGGTCTGACTTCACAACAAAGCACCACGG ACGGGAGGTCACATTCACCGTGAGCGCCATTCTGATGGTGTTTTGCCAGATCACAATCCC ATTGCTTGTGGAAGCGCAAATCGGGCTGGGCGGTGGAACTCGGATACTGACGGGCTACAC CACGGCGACATTCCTGCTCACATGCGTCGTCTCCTATGGTCTCAGCTGGTCATGGGGCTC ATTGTTCTGCACTATTCCTGGTATGAAGATTCAGTCAGCTGGGCAGGTTATCGGCATGGG TCTCTGTTTCGGGCTCTGCTTCGTGCAAATGCAGTACTTCCTGCTGATGCTGTGCCGGCT GAAGAACGCCATCCTTGCATACTACGCAATGTGGATTTGGTCTTGATTTAAACTAGGATC TCAAGAGAAGAGATGGGACAGATGGCTAGATGTCTGCCCGTTTTACTGCTAGCGTTTGAT GGATGTAAATATGCTCATTTTCTTTGCCTGTTCTGTACAGTTTTTGTATTGGTTGCTATC TCAGTGTAGATTCTCCCAAGCAGTTTCTGCGACTATGAGGCAATTAACAATGTTATGCTA AAA



consensusID : consensus_9844#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 762
fasta sequence
                              [GCAGTCAGCTCAGCTCCGGACGCAGCACCAGCTCGCGGGAGAGTTGCCGGAAGAGAAGCTCGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGGTGCGCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCATCCTCTCAGGCAGGCACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATACGCGATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAGAAATTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAATGCGGCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTGGACTATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGCCATCCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTCCTTGCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGATTCACAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGATTTGTTCATTCAAGACACTGAATTGTGCGATAAGCAAACCCTCGATTCAGGTTTCCTTGGCAGCAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAG]

[+] EMBL CB670059             [GCAGTCAGCTCAGCTCCGGACGCAGCACCAGCTCGCGGGAGAGTTGCCGGAAGAGAAGCTCGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGGTGCGCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCATCCTCTCAGGCAGGCACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATACGCGATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAGAAATTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAATGCGGCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTGGACTATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGCCATCCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTCCTTGCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGATTCACAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGATTTGTTCATTCAAGACACTGAATTGTGCGATAAGCAAACCCTCGATTCAGGTTTCCTTGGCAGCAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAG]


>consensus_9844#1 GCAGTCAGCTCAGCTCCGGACGCAGCACCAGCTCGCGGGAGAGTTGCCGGAAGAGAAGCT CGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGGTGC GCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCATCCTCTCAGGCAGGC ACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATACGC GATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAGAAA TTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAATGCG GCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTGGAC TATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGCCAT CCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTCCTT GCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGATTCA CAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGATTT GTTCATTCAAGACACTGAATTGTGCGATAAGCAAACCCTCGATTCAGGTTTCCTTGGCAG CAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9844#0      GTCTCACTCTCTCTGTCTCGCGGTTCTCGCCTCCTCCTCCTCTCTTTCCTTTTTCCTCTC 60
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      TCTGCTCCTCGTTGTTGCAGTCACCTCTCCTCTCCTTGTTCTTGCAGTCAGCTCAGCTCC 120
consensus_9844#1      -------------------------------------------GCAGTCAGCTCAGCTCC 17
                                                                 *****************

consensus_9844#0      GGACGCAGCACCAGTTTTCTCGGAGTGCCATCAGCTCGCGGGAGAGTTGCCGGAAGAGAA 180
consensus_9844#1      GGACGCAGCACCAG--------------------CTCGCGGGAGAGTTGCCGGAAGAGAA 57
                      **************                    **************************

consensus_9844#0      GCTCGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGG 240
consensus_9844#1      GCTCGCCGCCGGCGTACGACGGTGAAGGGGGAACGTACGAGCGCGAGTGCGGGGGTGTGG 117
                      ************************************************************

consensus_9844#0      TGCGCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCAGCCTCTCAGGCA 300
consensus_9844#1      TGCGCCGCCGCTGTCGAGGTAGCTGACGCGGCCTCTGGAAGGCTCTCATCCTCTCAGGCA 177
                      ************************************************ ***********

consensus_9844#0      GGCACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATA 360
consensus_9844#1      GGCACAATAGTTTGTAGGGAGTACAAGTAGCAGAACTGGTGTGTTTGGGATCCAATCATA 237
                      ************************************************************

consensus_9844#0      CGCGATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAG 420
consensus_9844#1      CGCGATGGCCTTCTTCCCTAACATTCCCGAGGCAAAGCAGGAGATTCAGTCCTTGTACAG 297
                      ************************************************************

consensus_9844#0      AAATTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAAT 480
consensus_9844#1      AAATTATGCACATTTGTTTGACATGTCATCGGATAATGCCGGTGTAGACTCCCGCATAAT 357
                      ************************************************************

consensus_9844#0      GCGGCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTG 540
consensus_9844#1      GCGGCGCCAGCCTGCCATGTTGATAGATCGTTCTGTTTTCCTCACTGGAAGCGCGATTTG 417
                      ************************************************************

consensus_9844#0      GACTATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGC 600
consensus_9844#1      GACTATTGCCCTCCACTACAAGGCTCACATTTACAGATGGTTACTGCAGAAGTTTTCTGC 477
                      ************************************************************

consensus_9844#0      CATCCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTC 660
consensus_9844#1      CATCCAGGGCGCACCAATTTATTGTGCCATGATATTGCGATCCTTATGTCGACGTAGCTC 537
                      ************************************************************

consensus_9844#0      CTTGCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGAT 720
consensus_9844#1      CTTGCCTTTCTTTGTTGGCATTAGTGTTCTGACAGCCAGGATATATAACTACGTTACGAT 597
                      ************************************************************

consensus_9844#0      TCACAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGA 780
consensus_9844#1      TCACAATCATATTTATTCCCCACAACTCTGCGCTGGCCATGACGCTAACCTTCGGAGGGA 657
                      ************************************************************

consensus_9844#0      TTTGTTCATTCAAGACACTGAATTGTGCAATAAGCAAACCCTCGATTCAGGTTTCCTTGG 840
consensus_9844#1      TTTGTTCATTCAAGACACTGAATTGTGCGATAAGCAAACCCTCGATTCAGGTTTCCTTGG 717
                      **************************** *******************************

consensus_9844#0      CAGCAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAGCACTGCCAATTTAAA 900
consensus_9844#1      CAGCAAGCATGATTGTATCCGTCTAGCACTTCATTTTATTTGCAG--------------- 762
                      *********************************************               

consensus_9844#0      GGTTTATACAACACCAAAACAGATCGGTTTCGATGGGAAGTGCAAACAAAAGAATACCGA 960
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      GAGAGGCCGATTTTGGAGGATCTTATCAACAAATGAGCAATATCTGACTTATATTGGGGC 1020
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      ACTAGTGACACTACAACTGTTTTTACAACTGAGCAGAGCGAACATTACCACTCTGCTCCT 1080
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      GCCAATGCTATATCAGACAACAAGCTCCCAGCGCAATGCTGCAGTTGTCGGTAACATCGT 1140
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      GATTGTTTTGGTGAACTCCTTTGGCATTCTTGGGTCTGACTTCACAACAAAGCACCACGG 1200
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      ACGGGAGGTCACATTCACCGTGAGCGCCATTCTGATGGTGTTTTGCCAGATCACAATCCC 1260
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      ATTGCTTGTGGAAGCGCAAATCGGGCTGGGCGGTGGAACTCGGATACTGACGGGCTACAC 1320
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      CACGGCGACATTCCTGCTCACATGCGTCGTCTCCTATGGTCTCAGCTGGTCATGGGGCTC 1380
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      ATTGTTCTGCACTATTCCTGGTATGAAGATTCAGTCAGCTGGGCAGGTTATCGGCATGGG 1440
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      TCTCTGTTTCGGGCTCTGCTTCGTGCAAATGCAGTACTTCCTGCTGATGCTGTGCCGGCT 1500
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      GAAGAACGCCATCCTTGCATACTACGCAATGTGGATTTGGTCTTGATTTAAACTAGGATC 1560
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      TCAAGAGAAGAGATGGGACAGATGGCTAGATGTCTGCCCGTTTTACTGCTAGCGTTTGAT 1620
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      GGATGTAAATATGCTCATTTTCTTTGCCTGTTCTGTACAGTTTTTGTATTGGTTGCTATC 1680
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      TCAGTGTAGATTCTCCCAAGCAGTTTCTGCGACTATGAGGCAATTAACAATGTTATGCTA 1740
consensus_9844#1      ------------------------------------------------------------
                                                                                  

consensus_9844#0      AAA 1743
consensus_9844#1      ---
                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)