These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9872#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2002 fasta sequence [CTCGAACCATAGATGAAACAGATTATTAATCTCAAATTCGTCGTCCTCGCAAATCGGATCAGCATGGCTGCCATCCTGCTGCTGCTGCTCGTGTTCTTGGTGAGTGTGGCCTTGGTTGTTCGAACATGGAGTGCTAGTAGGAGATCTCATGAGAAGGCGCGGTATGCGACGGCCGAGCTGCGGCCGTATCCGCTGGTCGGCCACCTGCCGCAGTTCCTCGCCAACCGGCACCGCATCCTGGACTGGATGACGGAGGTGCTGTCGCGGCAGCCGACGCGCACGTTCGTGCTCCGCCGCCCCGGCGGCGTGCGGGGCGTGATCACCGCGAACCCGGCGAACGTGGAGCGCTTCCTCCGATCCGGGTTCGACAACTACCCCAAGGGCGAGCGCTTCGCGTCGCTGCTGCACGACTTCCTCGGGCGCGGCATCTTCAACGCTGACGGCGAGGCGTGGCGGTCGCAGCGCAAGGCGGCGAGCTACGAGTTCAACACGCGGTCGCTCCGCGCCTTCGTGGCGCGGTGCGTGCACGGGGAGCTGCACGGGCGCCTCCTCCCGCTGCTGCGGCGCGCCGCGGCGGAGGGCCGCGCCATCGACCTCCAGGACGCGCTCGAGCGCTTCGCGTTCGACAACATCTGCCGTGTCGCCTTCGACCACGACCCCGGCCAGCTCCCTGACGCCAGCGGCGGCGGCGCTCTCGCGGAGGCCGACGATGGCTCCACTGCCAGCGGCAGGTTCGCCGACGCGTTCCGCGACGCCGCTAATCTCAGCGCGGGGCGGTTCCGGTATGCTGTCCCGTGGTTCTGGAGGGTGAAGAAGGCGCTCCACATTGGGTCCGAGCGGCGGCTGCGCGAGTCCATCGCCATCGTCCACGACTTCGCCGACCGCATCATCCGGTCGCGGCGGGAGGAGATACGCGCCGGCCTCGAGAAGCACGACCTCCTGTCCCGGTTCATGGCGAGCCACGACGAGTCGTACACCGAGGTGGCCCTCCGCGACGTCGTCATCAGCTTCCTCCTCGCGGGGCGGGAGACCACGTCGTCGGCGCTCACCTGGTTCTTCTGGCTTCTCTCCTCTCGCCCGGACGTGGAGCGGCGCATCCGCGAAGAAGTCGCCACGGTGCGCGCACGCCGTGGCGACGGCGACGTCGACAGGGTCGGCTTCGACCTGGACGAGCTGAGAGAGATGCAGTACGTGCACGCCGCAATCACGGAGTCGATGCGCCTCTACCCGCCGGTGCCGGTGGACTCGCTGCATGCGCAGGAGGACGACGTCCTGCCGGACGGCACGGCGGTGGAGGCCGGGTGGTTCGTGGCGTACAACTCGTACGCCATGGGGCGCATGGAGTCCGTGTGGGGCAAGGACGCGGCGGAGTTCCGGGCGGAGCGGTGGCTGGAGGACGCGGCGGCGGCGACGTTCCGGCCGGAGAGCCCGTTCCGGTACGTGTCGTTCCACGGCGGGCCGAGGGTGTGCCTCGGGAAGGAGATGGCGTACATACAGATGAAGTCCATCATCGCCTGCGTGCTCCAGGAGCTCGAGCTCGCCGTCGACGGCGCGTACCGGCCGCGGCAGGTGACGTCACTGACGCTGCGAATGGCGGATGGGCTCCCCACTAGGGTGAAAGTTAGAGGCAATTGAATGTGACATTTGGGCTTGTGGACCATGGCCCGTAGCAGAAAGAAACAGTTTCCCATGCAGATGATGGTGCCGATCTCTAAACTTCTTAGCAGGCCGAATATAGAACCGTCCGAATAATTGGGCCGGGCCTAAAGCTACGTTGGTGGCACGTCCTGGGCCTATTCATACAGCTGCTGTATGTAAATGTTTTTCATTTTCTCTTTGGGAAGATCATGACATGTATGTCATTAGTCATTACTAGTACTCATTAGATAGTCACGGATTCAATGAAATCTAGGGCGCTTGATGGGAGATGCAATTGCGGCAGAC-CGCTGAACAACCTTGAACCGGTCATTATCATTTGAAAGGAATACTGGAAAATGATCAT] [+] EMBL CB626588 [CTCGAACCATAGATGAAACAGATTATTAATCTCAAATTCGTCGTCCTCGCAAATCGGATCAGCATGGCTGCCATCCTGCTGCTGCTGCTCGTGTTCTTGGTGAGTGTGGCCTTGGTTGTTCGAACATGGAGTGCTAGTAGGAGATCTCATGAGAAGGCGCGGTATGCGACGGCCGAGCTGCGGCCGTATCCGCTGGTCGGCCACCTGCCGCAGTTCCTCGCCAACCGGCACCGCATCCTGGACTGGATGACGGAGGTGCTGTCGCGGCAGCCGACGCGCACGTTCGTGCTCCGCCGCCCCGGCGGCGTGCGGGGCGTGATCACCGCGAACCCGGCGAACGTGGAGCGCTTCCTCCGATCCGGGTTCGACAACTACCCCAAGGGCGAGCGCTTCGCGTCGCTGCTGCACGACTTCCTCGGGCGCGGCATCTTCAACGCTGACGGCGAGGCGTGGCGGTCGCAGCGCAAGGCGGCGAGCTACGAGTTCAACACGCGGTCGCTCCGCGCCTTCGTGGCGCGGTGCGTGCACGGGGAGCTGCACGGGCGCCTCCTCCCGCTGCTGCGGCGCGCCGCGGCGGAGGGCCGCGCCATCGACCTCCAGGACGCGCTCGAGCGCTTCGCGTTCGACAACATCTGCCGTGTCGCCTTCGACCACGACCCCGGCCAGCTCCCTGACGCCAGCGGCGGCGGCGCTCTCGCGGAGGCCGACGATGGCTCCACTGCCAGCGGCAGGTTCGCCGACGCGTTCCGCGACGCCGCTAATCTCA ] [+] EMBL CB624510 [CTCGAACTACAGATGAAACAGATTATTAATCTCAAATTCGTCGTCCTCGCAAATCGGATCAGCATGGCTGCCATCCTGCTGCTGCTGCTCGTGTTCTTGGTGAGTGTGGCCTTGGTTGTTCGAACATGGAGTGCTAGTAGGAGATCTCATGAGAAGGCGCGGTATGCGACGGCCGAGCTGCGGCCGTATCCGCTGGTCGGCCACCTGCCGCAGTTCCTCGCCAACCGGCACCGCATCCTGGACTGGATGACGGAGGTGCTGTCGCGGCAGCCGACGCGCACGTTCGTGCTCCGCCGCCCCGGCGGCGTGCGGGGCGTGATCACCGCGAACCCGGCGAACGTGGAGCGCTTCCTCCGATCCGGGTTCGACAACTACCCCAAGGGCGAGCGCTTCGCGTCACTGCTGCACGACTTCCTCGGGCGCGGCATCTTCAACGCTGACGGCGAGGCGTGGCGGTCGCAGCGCAAGGCGGCGAGCTACGAGTTCAACACGCGGTCGCTCCGCGCCTTCATGGCGCGGTGCGTGCACGGGGAGCTGCACGGGCGCCTCCTCCCGCTGCTGCGGCGCGCCGCGGCGGAGGGCCGCGCCATCGACCTCCAGGACGCGCTCGAGCGCTTCGCGTTCGACAACATCTGCCGTGTCGCCTTCGACCACGACCCCGGCCAGCTCCCTGACGCCAGCGGCGGCGGCGCTCTCGCGGAGGCCGACGATGGCTCCACTGCCAGCGGCAGGTTCGCCGACG ] [+] EMBL AK109504 [ ATGAAACAGATTATTAATCTCAAATTCGTCGTCCTCGCAAATCGGATCAGCATGGCTGCCATCCTGCTGCTGCTGCTCGTGTTCTTGGTGAGTGTGGCCTTGGTTGTTCGAACATGGAGTGCTAGTAGGAGATCTCATGAGAAGGCGCGGTATGCGACGGCCGAGCTGCGGCCGTATCCGCTGGTCGGCCACCTGCCGCAGTTCCTCGCCAACCGGCACCGCATCCTGGACTGGATGACGGAGGTGCTGTCGCGGCAGCCGACGCGCACGTTCGTGCTCCGCCGCCCCGGCGGCGTGCGGGGCGTGATCACCGCGAACCCGGCGAACGTGGAGCGCTTCCTCCGATCCGGGTTCGACAACTACCCCAAGGGCGAGCGCTTCGCGTCGCTGCTGCACGACTTCCTCGGGCGCGGCATCTTCAACGCTGACGGCGAGGCGTGGCGGTCGCAGCGCAAGGCGGCGAGCTACGAGTTCAACACGCGGTCGCTCCGCGCCTTCGTGGCGCGGTGCGTGCACGGGGAGCTGCACGGGCGCCTCCTCCCGCTGCTGCGGCGCGCCGCGGCGGAGGGCCGCGCCATCGACCTCCAGGACGCGCTCGAGCGCTTCGCGTTCGACAACATCTGCCGTGTCGCCTTCGACCACGACCCCGGCCAGCTCCCTGACGCCAGCGGCGGCGGCGCTCTCGCGGAGGCCGACGATGGCTCCACTGCCAGCGGCAGGTTCGCCGACGCGTTCCGCGACGCCGCTAATCTCAGCGCGGGGCGGTTCCGGTATGCTGTCCCGTGGTTCTGGAGGGTGAAGAAGGCGCTCCACATTGGGTCCGAGCGGCGGCTGCGCGAGTCCATCGCCATCGTCCACGACTTCGCCGACCGCATCATCCGGTCGCGGCGGGAGGAGATACGCGCCGGCCTCGAGAAGCACGACCTCCTGTCCCGGTTCATGGCGAGCCACGACGAGTCGTACACCGAGGTGGCCCTCCGCGACGTCGTCATCAGCTTCCTCCTCGCGGGGCGGGAGACCACGTCGTCGGCGCTCACCTGGTTCTTCTGGCTTCTCTCCTCTCGCCCGGACGTGGAGCGGCGCATCCGCGAAGAAGTCGCCACGGTGCGCGCACGCCGTGGCGACGGCGACGTCGACAGGGTCGGCTTCGACCTGGACGAGCTGAGAGAGATGCAGTACGTGCACGCCGCAATCACGGAGTCGATGCGCCTCTACCCGCCGGTGCCGGTGGACTCGCTGCATGCGCAGGAGGACGACGTCCTGCCGGACGGCACGGCGGTGGAGGCCGGGTGGTTCGTGGCGTACAACTCGTACGCCATGGGGCGCATGGAGTCCGTGTGGGGCAAGGACGCGGCGGAGTTCCGGGCGGAGCGGTGGCTGGAGGACGCGGCGGCGGCGACGTTCCGGCCGGAGAGCCCGTTCCGGTACGTGTCGTTCCACGGCGGGCCGAGGGTGTGCCTCGGGAAGGAGATGGCGTACATACAGATGAAGTCCATCATCGCCTGCGTGCTCCAGGAGCTCGAGCTCGCCGTCGACGGCGCGTACCGGCCGCGGCAGGTGACGTCACTGACGCTGCGAATGGCGGATGGGCTCCCCACTAGGGTGAAAGTTAGAGGCAATTGAATGTGACATTTGGGCTTGTGGACCATGGCCCGTAGCAGAAAGAAACAGTTTCCCATGCAGATGATGGTGCCGATCTCTAAACTTCTTACCAGGCCGAATATAGAACCGTCCGAATAATTGGGCCGGGCCTAAAGCTACGTTGGTGGCACGTCCTGGGCCTATTCATACAGCTGCTGTATGTAAATGCTTTTCATTTTCTCTTTGGGAAGATCATGACACGTATGTCATTAGTCATTACTAGTACTCATTAGATAGTCACGGATTCAATGAAATCTAGGGCGCTTGATGGGAGATGCAATTGCGGCAGAC CGCTGAACAACCTTGAACCGGTCATTATCATTTGAAAGGAATACTGGAAAATGATCAT] [+] EMBL AK062585 [ ATGAAACAGATTATTAATCTCAAATTCGTCGTCCTCGCAAATCGGATCAGCATGGCTGCCATCCTGCTGCTGCTGCTCGTGTTCTTGGTGAGTGTGGCCTTGGTTGTTCGAACATGGAGTGCTAGTAGGAGATCTCATGAGAAGGCGCGGTATGCGACGGCCGAGCTGCGGCCGTATCCGCTGGTCGGCCACCTGCCGCAGTTCCTCGCCAACCGGCACCGCATCCTGGACTGGATGACGGAGGTGCTGTCGCGGCAGCCGACGCGCACGTTCGTGCTCCGCCGCCCCGGCGGCGTGCGGGGCGTGATCACCGCGAACCCGGCGAACGTGGAGCGCTTCCTCCGATCCGGGTTCGACAACTACCCCAAGGGCGAGCGCTTCGCGTCGCTGCTGCACGACTTCCTCGGGCGCGGCATCTTCAACGCTGACGGCGAGGCGTGGCGGTCGCAGCGCAAGGCGGCGAGCTACGAGTTCAACACGCGGTCGCTCCGCGCCTTCGTGGCGCGGTGCGTGCACGGGGAGCTGCACGGGCGCCTCCTCCCGCTGCTGCGGCGCGCCGCGGCGGAGGGCCGCGCCATCGACCTCCAGGACGCGCTCGAGCGCTTCGCGTTCGACAACATCTGCCGTGTCGCCTTCGACCACGACCCCGGCCAGCTCCCTGACGCCAGCGGCGGCGGCGCTCTCGCGGAGGCCGACGATGGCTCCACTGCCAGCGGCAGGTTCGCCGACGCGTTCCGCGACGCCGCTAATCTCAGCGCGGGGCGGTTCCGGTATGCTGTCCCGTGGTTCTGGAGGGTGAAGAAGGCGCTCCACATTGGGTCCGAGCGGCGGCTGCGCGAGTCCATCGCCATCGTCCACGACTTCGCCGACCGCATCATCCGGTCGCGGCGGGAGGAGATACGCGCCGGCCTCGAGAAGCACGACCTCCTGTCCCGGTTCATGGCGAGCCACGACGAGTCGTACACCGAGGTGGCCCTCCGCGACGTCGTCATCAGCTTCCTCCTCGCGGGGCGGGAGACCACGTCGTCGGCGCTCACCTGGTTCTTCTGGCTTCTCTCCTCTCGCCCGGACGTGGAGCGGCGCATCCGCGAAGAAGTCGCCACGGTGCGCGCACGCCGTGGCGACGGCGACGTCGACAGGGTCGGCTTCGACCTGGACGAGCTGAGAGAGATGCAGTACGTGCACGCCGCAATCACGGAGTCGATGCGCCTCTACCCGCCGGTGCCGGTGGACTCGCTGCATGCGCAGGAGGACGACGTCCTGCCGGACGGCACGGCGGTGGAGGCCGGGTGGTTCGTGGCGTACAACTCGTACGCCATGGGGCGCATGGAGTCCGTGTGGGGCAAGGACGCGGCGGAGTTCCGGGCGGAGCGGTGGCTGGAGGACGCGGCGGCGGCGACGTTCCGGCCGGAGAGCCCGTTCCGGTACGTGTCGTTCCACGGCGGGCCGAGGGTGTGCCTCGGGAAGGAGATGGCGTACATACAGATGAAGTCCATCATCGCCTGCGTGCTCCAGGAGCTCGAGCTCGCCGTCGACGGCGCGTACCGGCCGCGGCAGGTGACGTCACTGACGCTGCGAATGGCGGATGGGCTCCCCACTAGGGTGAAAGTTAGAGGCAATTGAATGTGACATTTGGGCTTGTGGACCATGGCCCGTAGCAGAAAGAAACAGTTTCCCATGCAGATGATGGT ] [+] EMBL AK105985 [ CTCAAATTCGTCGTCCTCGCAAATCGGATCAGCATGGCTGCCATCCTGCTGCTGCTGCTCGTGTTCTTGGTGAGTGTGGCCTTGGTTGTTCGAACATGGAGTGCTAGTAGGAGATCTCATGAGAAGGCGCGGTATGCGACGGCCGAGCTGCGGCCGTATCCGCTGGTCGGCCACCTGCCGCAGTTCCTCGCCAACCGGCACCGCATCCTGGACTGGATGACGGAGGTGCTGTCGCGGCAGCCGACGCGCACGTTCGTGCTCCGCCGCCCCGGCGGCGTGCGGGGCGTGATCACCGCGAACCCGGCGAACGTGGAGCGCTTCCTCCGATCCGGGTTCGACAACTACCCCAAGGGCGAGCGCTTCGCGTCGCTGCTGCACGACTTCCTCGGGCGCGGCATCTTCAACGCTGACGGCGAGGCGTGGCGGTCGCAGCGCAAGGCGGCGAGCTACGAGTTCAACACGCGGTCGCTCCGCGCCTTCGTGGCGCGGTGCGTGCACGGGGAGCTGCACGGGCGCCTCCTCCCGCTGCTGCGGCGCGCCGCGGCGGAGGGCCGCGCCATCGACCTCCAGGACGCGCTCGAGCGCTTCGCGTTCGACAACATCTGCCGTGTCGCCTTCGACCACGACCCCGGCCAGCTCCCTGACGCCAGCGGCGGCGGCGCTCTCGCGGAGGCCGACGATGGCTCCACTGCCAGCGGCAGGTTCGCCGACGCGTTCCGCGACGCCGCTAATCTCAGCGCGGGGCGGTTCCGGTATGCTGTCCCGTGGTTCTGGAGGGTGAAGAAGGCGCTCCACATTGGGTCCGAGCGGCGGCTGCGCGAGTCCATCGCCATCGTCCACGACTTCGCCGACCGCATCATCCGGTCGCGGCGGGAGGAGATACGCGCCGGCCTCGAGAAGCACGACCTCCTGTCCCGGTTCATGGCGAGCCACGACGAGTCGTACACCGAGGTGGCCCTCCGCGACGTCGTCATCAGCTTCCTCCTCGCGGGGCGGGAGACCACGTCGTCGGCGCTCACCTGGTTCTTCTGGCTTCTCTCCTCTCGCCCGGACGTGGAGCGGCGCATCCGCGAAGAAGTCGCCACGGTGCGCGCACGCCGTGGCGACGGCGACGTCGACCGGGTCGGCTTCGACCTGGACGAGCTGAGAGAGATGCAGTACGTGCACGCCGCAATCACGGAGTCGATGCGCCTCTACCCGCCGGTGCCGGTGGACTCGCTGCATGCGCAGGAGGACGACGTCCTGCCGGACGGCACGGCGGTGGAGGCCGGGTGGTTCGTGGCGTACAACTCGTACGCCATGGGGCGCATGGAGTCCGTGTGGGGCAAGGACGCGGCGGAGTTCCGGGCGGAGCGGTGGCTGGAGGACGCGGCGGCGGCGACGTTCCGGCCGGAGAGCCCGTTCCGGTACGTGTCGTTCCACGGCGGGCCGAGGGTGTGCCTCGGGAAGGAGATGGCGTACATACAGATGAAGTCCATCATCGCCTGCGTGCTCCAGGAGCTCGAGCTCGCCGTCGACGGCGCGTACCGGCCGCGGCAGGTGACGTCACTGACGCTGCGAATGGCGGATGGGCTCCCCACTAGGGTGAAAGTTAGAGGCAATTGAATGTGACATTTGGGCTTGTGGACCATGGCCCGTAGCAGAAAGAAACAG ] [-] EMBL CB624511 [ AGCTGAGAGAGATGCAGTACGTGCACGCCGCAATCACGGAGTCGATGCGCCTCTACCCGCCGGTGCCGGTGGACTCGCTGCATGCGCAGGAGGACGACGTCCTGCCGGACGGCACGGCGGTGGAGGCCGGGTGGTTCGTGGCGTACAACTCGTACGCCATGGGGCGCATGGAGTCCGTGTGGGGCAAGGACGCGGCGGAGTTCCGGGCGGAGCGGTGGCTGGAGGACGCGGCGGCGGCGACGTTCCGGCCGGAGAGCCCGTTCCGGTACGTGTCGTTCCACGGCGGGCCGAGGGTGTGCCTCGGGAAGGAGATGGCGTACATACAGATGAAGTCCATCATCGCCTGCGTGCTCCAGGAGCTTGAGCTCGCCGTCGACGGCGCGTACCGGCCGCGGCAGGTGACGTCACTGACGCTGCGAATGGCGGATGGGCTCCCCACTAGGGTGAAAGTTAGAGGCAATTGAATATGACATTTGGGCTTGTGGACCATGGCCTGTAGCAGAAAGAAACAGTTTCCCATGCAGATGATGGTGCCGATCTCTAAACTTCTTAGCAGGCCGAATATAGAACCGTCCGAATAATTGGGCCGGGCCTAAAGCTACGTTGGTGGCACGTCCTGGGCCTATTCATACAGCTGCTGTATGTAAATGTTTTTCATTTTCTCTTTGGGAAGATCATGACATGTATGTCATTAGTCATTACTAGTACTCATTAGATAGTCACGGATTCAATGAAATCTAGGGCGCTTGATGGGAGATGCAATTGCGGCAGCC CGCTGAACAACCTTGAACCGGTCATTATCA TCGAAAaaaaagga ] [-] EMBL CB626589 [ GACGACGTCCTGCCGGTCGGCACGGCGGTGGAGGCCGGGTGGTTCGTGGCGTACAACTAGTACGCCATGGGGCGCATGGAGTCCGTGTGGGGCAAGGACGCGGCGGAGTTCCGGGCGGAGCGGTGGCTGGAGGACGCGGCGGCGGCGACGTTCCGGCTGGAGAGCCCGTTCCGGTACGTGTAGTTCCACGGCGGGCCGAGGGTGTGCCTCGGGAAGGAGATGGCGTACATACAGATGAAGTCCATCATCGCCTGCGTGCTCCAGGAGCTCGAGCTCGCCGTCGACGGCGCGTACCGGCCGCGGCAGGTGACGTCATTGACGTTGCGAATGGCGGATGGGCTCCCCTCTAGGGTGAAAGTTAGAGGCAATTGAATATGCCATTTGGGCTTGTGGACCATGGCCTGTAGCAGAAAGAAACAGTTTCCCATGCAGATGATGGTGCCGATCTCTAAACTTCTTAGCAGGCCGAATATAGAACCGTCCGAATAATTGGGCCGGGCCTAAAGCTACGTTGGTGGCACTTCCTGGGCCTACTCATTCAGGTGCTGTATGTAAAGGTTTTTCATTTTCTCTTTGGGAAGATCATGTCATGTATGTCATTAGTCATTAGTAGTACTCATTAGATAGTCACGGATTCAATGAAATGTAGGGCGCTTGATGGGAGATGCAATTGCGGCAGACGCGCTGAACAACCTTGAACCGGTCAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||