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Oryza sativa
cluster # 99 cluster # 99       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_99#0 length = 1585 sequences # 2  

consensusID : consensus_99#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1585
fasta sequence
                              [CGATATCACTTCGTCACCTTGCCTATTTCCGCAAGAACGATCGCACGATGCCGTCGTCGCCATCGCACCCGCACGTCGCCGTGGTGGCTTTCCCCTTCAGCTCCCACGCCCCCAAGCTCCTCGCCGTCGCGCGCGCCCTCGCCACGGCGGCGCCCTCCGCCACCTTCTCCTTCCTCTCCACCGCCGACTCCCTCGCGCGCCTCCCCGCCACCGCCGTCGTCCCCGCCGGGAACAACAACCTGCGGTTCGTGGAGGTGCCCACGGATGGTGATCAGGAGGAGACGTGGCCGGTGTGGCGCCGGATGGAGATGTTCGTCGAGGCTGCGGAGGGTGGCGGGCTCAGGCGGGTGATGGAGGCGGCCGGCGACGCGGCTGGCGGGGTGGCGGTGAGCTGCGTGGTCGGGGACGCGTTCATGTCCATGGCCGCCGAGGTTGGGGTGCCCTGGGTCGCCGTCTGGACGGGTGGCCCGTGCGCGCTCCTGGCGCACATCGTCGGCGACGCGATCCGGGAGGACATCGGTGACGACGACGACCTCCACGGTGCTCGCGGCGACGAGCTGCTCACCTCCTACCCTGGCCTCGGGAGCTACCGCGTCCGCGACCTCCCCTTCGGCGGCGGCGGCGTCGGCGGCGACATGCACCGCGTCATGACCATGCTCCTCGGCCGCGTGGCGCGGCGGCTGCCACGCGCCGCCACCGCCGTCGCGATCAACGCGTTCCCGGG-CCTCTT--CCCG-CCGGACGTCTCCGCCGCCCTCGCCGACGCGCTCCCCAACTGCCTCCCCATCGGCCCCTACCACCTCCTCCCCGGCGCCGCCGCCACGCAAGCCAACGACGACGACCCCCACGGCTGCCTCGCGTGGCTCGCGCGCCGCCCCGTGGGCTCCGTCGCGTACGTCAGCTTCGGCACGGTCGCCGCGCCGCCGCC-GGAC-GAGCTCCGCGAGCTGGCCGCGGGGCTCGAGGCCAGCGGCGC-GCCATTCCTCTGGTCACTCCGGGAGGACTCGTGGCCGCTGCTCCC-GCCGGAGTTCCTCGACCGCGCCACCAAGGCCGGCGACTCCGCCGCCGGGCTCGTGGTGGCGTGGACGCCGCAGGCCGCCGTGCTGCGCCACCCGGCGGTGGGCGCGTTCGTGACGCACTCCGGCTGGGGAGCCGTCCTGGAGGCGATGTCCGGCGGCGTGCCCATGGCGTGCCGGCCATTCTTCGGTGACCAGCACATGAACGCACGCGCCGTGGCGCGCCTGTGGTGCTTCGGCATGGCGTTCGACGACGACAACGACGGCGGCGGCAAGCCGTCGATGATGACGCGCGGCCGCGTGGCAGAGGCGGTGGCGTCGCTGCTCGCCGGAGAGGAGGAAGGGGCCCGGATGATGAGGGCTAGAGCACGGGAGCTTCAGGCCATGGTGGTCTCGGCGTTCGAGCCCGACGGTGAATCGACGAAAAACTTGCACAAATTTGTCGAAATTGTTTGTGCCCGTCGGGTGTGATCGATACATGCATGGCATCGATTTTTAGAACTTCAGAAGAAATTAAAAATTTTAGAACGATAAGCTACAATAATGTTATATATCACCTTAACCTATATAACAAT]

[+] EMBL AK106312             [CGATATCACTTCGTCACCTTGCCTATTTCCGCAAGAACGATCGCACGATGCCGTCGTCGCCATCGCACCCGCACGTCGCCGTGGTGGCTTTCCCCTTCAGCTCCCACGCCCCCAAGCTCCTCGCCGTCGCGCGCGCCCTCGCCACGGCGGCGCCCTCCGCCACCTTCTCCTTCCTCTCCACCGCCGACTCCCTCGCGCGCCTCCCCGCCACCGCCGTCGTCCCCGCCGGGAACAACAACCTGCGGTTCGTGGAGGTGCCCACGGATGGTGATCAGGAGGAGACGTGGCCGGTGTGGCGCCGGATGGAGATGTTCGTCGAGGCTGCGGAGGGTGGCGGGCTCAGGCGGGTGATGGAGGCGGCCGGCGACGCGGCTGGCGGGGTGGCGGTGAGCTGCGTGGTCGGGGACGCGTTCATGTCCATGGCCGCCGAGGTTGGGGTGCCCTGGGTCGCCGTCTGGACGGGTGGCCCGTGCGCGCTCCTGGCGCACATCGTCGGCGACGCGATCCGGGAGGACATCGGTGACGACGACGACCTCCACGGTGCTCGCGGCGACGAGCTGCTCACCTCCTACCCTGGCCTCGGGAGCTACCGCGTCCGCGACCTCCCCTTCGGCGGCGGCGGCGTCGGCGGCGACATGCACCGCGTCATGACCATGCTCCTCGGCCGCGTGGCGCGGCGGCTGCCACGCGCCGCCACCGCCGTCGCGATCAACGCGTTCCCGGG CCTCTT  CCCG CCGGACGTCTCCGCCGCCCTCGCCGACGCGCTCCCCAACTGCCTCCCCATCGGCCCCTACCACCTCCTCCCCGGCGCCGCCGCCACGCAAGCCAACGACGACGACCCCCACGGCTGCCTCGCGTGGCTCGCGCGCCGCCCCGTGGGCTCCGTCGCGTACGTCAGCTTCGGCACGGTCGCCGCGCCGCCGCC GGAC GAGCTCCGCGAGCTGGCCGCGGGGCTCGAGGCCAGCGGCGC GCCATTCCTCTGGTCACTCCGGGAGGACTCGTGGCCGCTGCTCCC GCCGGAGTTCCTCGACCGCGCCACCAAGGCCGGCGACTCCGCCGCCGGGCTCGTGGTGGCGTGGACGCCGCAGGCCGCCGTGCTGCGCCACCCGGCGGTGGGCGCGTTCGTGACGCACTCCGGCTGGGGAGCCGTCCTGGAGGCGATGTCCGGCGGCGTGCCCATGGCGTGCCGGCCATTCTTCGGTGACCAGCACATGAACGCACGCGCCGTGGCGCGCCTGTGGTGCTTCGGCATGGCGTTCGACGACGACAACGACGGCGGCGGCAAGCCGTCGATGATGACGCGCGGCCGCGTGGCAGAGGCGGTGGCGTCGCTGCTCGCCGGAGAGGAGGAAGGGGCCCGGATGATGAGGGCTAGAGCACGGGAGCTTCAGGCCATGGTGGTCTCGGCGTTCGAGCCCGACGGTGAATCGACGAAAAACTTGCACAAATTTGTCGAAATTGTTTGTGCCCGTCGGGTGTGATCGATACATGCATGGCATCGATTTTTAGAACTTCAGAAGAAATTAAAAATTTTAGAACGATAAGCTACAATAATGTTATATATCACCTTAACCTATATAACAAT]
[-] EMBL BM422215             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGCGTTTCCGGGCCCTCTTTCCCCGCCCGGACGTC CCGCCGCCCTCGCCGACGCGCTCCCCAACTGCCTCCCCATCGGCCCCTACCACCTCCTCCCCGGCGCCGCCGCCACGCAAGCCAACGACGACGACCCCCACGGCTGCCTCGCGTGGCTCGCGCGCCGCCCCGCGGGCTCCGTCGCGTACGTTAGCTTCGGCACGGTCGCCGCGCCGCCGCCAGGACAGAGCTCCGCGAGCTGGCCGCGGGGCTCGAGGCCAGCGGCGCAGCCATTCCTCTGGTCACTCCGGGAGGACTCGTGGCCGCTGCTCCCAGCCGGAGTTCCTCGACCGCGCCACCAAGGCCGGCGACTCCGCCGCCGGGCTCGTGGTGGCGTGGACGCCTCCGGCCGCCGTGCTGCGCCACCCGGCGGTGGGCGCGTTCGTGACGCACTCCGGCTGGGGAGCCGTCCTGGAGGCGATGTCCGGCGGCGTGCCCATGGCGTGCCGGCCATTCTTCGGTGACCAGCACATGAACGCACGCGCCGTGGCGCGCCTGTGGTGCTTCGGCATGGCGTTCGACCNCGACAACGACGGCGGCGGCAAGCCGTCGATGA                                                                                                                                                                                                                                                                                                 ]


>consensus_99#0 CGATATCACTTCGTCACCTTGCCTATTTCCGCAAGAACGATCGCACGATGCCGTCGTCGC CATCGCACCCGCACGTCGCCGTGGTGGCTTTCCCCTTCAGCTCCCACGCCCCCAAGCTCC TCGCCGTCGCGCGCGCCCTCGCCACGGCGGCGCCCTCCGCCACCTTCTCCTTCCTCTCCA CCGCCGACTCCCTCGCGCGCCTCCCCGCCACCGCCGTCGTCCCCGCCGGGAACAACAACC TGCGGTTCGTGGAGGTGCCCACGGATGGTGATCAGGAGGAGACGTGGCCGGTGTGGCGCC GGATGGAGATGTTCGTCGAGGCTGCGGAGGGTGGCGGGCTCAGGCGGGTGATGGAGGCGG CCGGCGACGCGGCTGGCGGGGTGGCGGTGAGCTGCGTGGTCGGGGACGCGTTCATGTCCA TGGCCGCCGAGGTTGGGGTGCCCTGGGTCGCCGTCTGGACGGGTGGCCCGTGCGCGCTCC TGGCGCACATCGTCGGCGACGCGATCCGGGAGGACATCGGTGACGACGACGACCTCCACG GTGCTCGCGGCGACGAGCTGCTCACCTCCTACCCTGGCCTCGGGAGCTACCGCGTCCGCG ACCTCCCCTTCGGCGGCGGCGGCGTCGGCGGCGACATGCACCGCGTCATGACCATGCTCC TCGGCCGCGTGGCGCGGCGGCTGCCACGCGCCGCCACCGCCGTCGCGATCAACGCGTTCC CGGGCCTCTTCCCGCCGGACGTCTCCGCCGCCCTCGCCGACGCGCTCCCCAACTGCCTCC CCATCGGCCCCTACCACCTCCTCCCCGGCGCCGCCGCCACGCAAGCCAACGACGACGACC CCCACGGCTGCCTCGCGTGGCTCGCGCGCCGCCCCGTGGGCTCCGTCGCGTACGTCAGCT TCGGCACGGTCGCCGCGCCGCCGCCGGACGAGCTCCGCGAGCTGGCCGCGGGGCTCGAGG CCAGCGGCGCGCCATTCCTCTGGTCACTCCGGGAGGACTCGTGGCCGCTGCTCCCGCCGG AGTTCCTCGACCGCGCCACCAAGGCCGGCGACTCCGCCGCCGGGCTCGTGGTGGCGTGGA CGCCGCAGGCCGCCGTGCTGCGCCACCCGGCGGTGGGCGCGTTCGTGACGCACTCCGGCT GGGGAGCCGTCCTGGAGGCGATGTCCGGCGGCGTGCCCATGGCGTGCCGGCCATTCTTCG GTGACCAGCACATGAACGCACGCGCCGTGGCGCGCCTGTGGTGCTTCGGCATGGCGTTCG ACGACGACAACGACGGCGGCGGCAAGCCGTCGATGATGACGCGCGGCCGCGTGGCAGAGG CGGTGGCGTCGCTGCTCGCCGGAGAGGAGGAAGGGGCCCGGATGATGAGGGCTAGAGCAC GGGAGCTTCAGGCCATGGTGGTCTCGGCGTTCGAGCCCGACGGTGAATCGACGAAAAACT TGCACAAATTTGTCGAAATTGTTTGTGCCCGTCGGGTGTGATCGATACATGCATGGCATC GATTTTTAGAACTTCAGAAGAAATTAAAAATTTTAGAACGATAAGCTACAATAATGTTAT ATATCACCTTAACCTATATAACAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)