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Oryza sativa
cluster # 9913 cluster # 9913       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9913#0 length = 1155 sequences # 7  

consensusID : consensus_9913#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1155
fasta sequence
                              [GACCTCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGGCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTGACGGAGGATTTTTCAGAGGAATTATTACCGTG]

[+] EMBL CB643456             [GACCTCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGGCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTANATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCAT                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB643415             [GACCTCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGGCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCAAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGATAAGCGTAGCCATACTTACAGCGTCTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB643499             [GACCCCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGGGCCGGCCCGGCGCGTGGCCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAAAGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCATCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK073194             [                                                                                                                                                ACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTCGACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCGGAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCTTCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGTGCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTTACGGAGGATTTTTCAGAGGAATTATTACCGTG]
[-] EMBL CB643416             [                                                                                                                                                                                                                                                                                                                                                                                                  CAAGCTCTGGCTGACCACCGGTGTCAACCGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTGACGGAGGATTTTTCAGAGGA            ]
[-] EMBL CB643500             [                                                                                                                                                                                                                                                                                                                                                                                                                              CGGGACGGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTGACGGAGGATTTTTCAGAGGA            ]
[-] EMBL CB643457             [                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTTCTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGAGGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGCTATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTCACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGTGGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCATCCTTTGAAGTGTATCTCCCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGTTTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAAAACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTCCTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATCTGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGCAATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTCTCAAGGACGGAGGATTTTT                   ]


>consensus_9913#0 GACCTCTTGCGGGTGGGCCCCACCTGCCGTGGCCCATGTGGCTGAGAAGCCGGCTGGTGG GCCGGCCCGGCGCGTGGGCCCGTTGGTTTAGTGGCAGTGGTTGGGGGGTAAAAAGGTAAA AGGGTAAATTTGGTGGGAAAAATTACGGAAGTGGCCATGCCGAAGCCCACGCGCGCCGTC GACCACCGGCGGCGGAGGAGCGGGCGAGCTCCGGCGATCGCCGCCGTCGCCGTTGCCGCG GAGGATGATGGCGAGGAGCACCATCTCAATCCGTTCTTGGACGCCGCCCCGTCGTCGTCT TCGTCGAGAGTCCAGTTCAGGAAGGTGGCGTCGCGCGCGGTGTGGCTGGAGGAGGCTGGT GCGGCGGAGGTTGTGGACAGCAAGGGCAAGCTCTGGCTGACCACCGGTGTCAACCGGGAC GGCAAGCTGTACTACAATGTCGAGGAGATTGGGTTCTTGGCAGAAAGAGGGGCATTGGTT CTTCTTGATTACGAGGGTGAAACAATTGGAATGGAGGAAATCTACGGAAAGATTGCTGGA GGGAAATATGGGTGCTCCTGGGATGCCTTCCAAGCTTACAAGCACTTGAAGTTGCTCGGC TATATTATTGGACGATATGGCGTTCCCTGGACAGTTAAGCGTAGCCATACTTACAGCGTC ACTGATGCCTCCACAAGTGTGGTTGAAACTGATCAGATTCAGAGCTTAAATAGAGTCGGT GGTGCCTCCAATGACATAACTAAATTGCTCAAGGAAATGTGCATAGATGATATGCATCCA TCCTTTGAAGTGTATCTACCGAATAGCAAATTTAAGAAGACATCCCCAGGAGACCCTAGT TTCGTCCTATGCCTATTAAGCAACAAACCACCATCAAGGGAAGAACTAGAAACCGTTGAA AACAAGTTTGAGGGCATTCCTCTGAAATTTTGCCATGTTGACAACGGACGGGTCAGCTTC CTCTCCTCCAACAAAGCTGCTCTCCCTAGTTTGCCCTGATGAGATAGCAGCAGGAGAATC TGTTACTGTTAGTTTTTTCTGCTTCTGATCTTGTGACGTACATCACTTGGTATTAGATGC AATTCTGGTGTTCTTGTATAACTTCAGATCAGCATTAACACTGACGGAGGATTTTTCAGA GGAATTATTACCGTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)