These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9961#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2423 fasta sequence [ATACTACTCGTAAGATTGATGCCGCAACTTGATCGACTTGCACGTGTCATTGACAATTTTGCTACTTCGGCCCTTACGGTGATACAAGATATGCTTCGTATCTTCATTGTCCGTATTGCCTCTGAAAAGATTGAATGTGCTGTTGTTCTTCTTCGTCCGATCTTTATTTGGTTAAACAACAAAGTTGATGAAACTTCACTGTCAGAGAGAGAGATCTTCAAGGTTCATCAGTTGCTTCAATTTATTGCAAAACTGTCAGAACATCCAAATGGCAAGGCATTGCTCTGTAAAATGGGAGTCGCAAGGATTCTTAGAAAGTTATTACAAGAGTGCAGCAGTATGTGTTATATGGAGGACAACATGATTTCTGATAAAGGGGTCTACTCAAATGATCTCCTTATGCTAAGATGGAAGATTCCTTTGTTGAGATCTATTGCATCCATCTTTAGTACCCGGCCATCTAGTAAAGAGCCGACTACTGTTGAAGAGCTTTGGAACGAGAATGCCTGTGTTGAAGAATGCTCTTCTATCATGTATCACCTCTTGATGTTATGCCAGGTTCTGCCAGTTGGACGGGATATGTTTGCATGTTCTCTGGCATTCAAGGAGGTTGCTTCTTCCTATTCCTGTAGAGGCGCAGTAACTTCAATATTTTCACAAATCCAAACTTCTAACAAAGATGAGTCCCAAAAAAGTGAGAGTGAGACCTGTCATGACACGTCAAAGGTGGATAATTGGTGTGGCTTTTTCCCTTTGTTGAAGTGCTGGAAGAGGCTCCTACAATATATTTGTGCTAATCGTCCAACAGATTATTTGGTAGAAATAGTTTATGCCTTGACACTAGGTGCTATTGCCCTCAGCCAGTCTGGTCAAAATCTTGAAGGTACCATCATATTGAGGCGTCTATTTGGGCACCCCTCTGTTCCTAGTTCATCAGAGGCCTCTGATGAGGTTACTTTTTTATTGAAGACATTTCAAGAGAAGATATGCCAGGGGTTTGACAATTGGTCGCCTTACGTTGGGAAACCTCTTTTACATCAGGTACGGAGCTCTGTCAGATTGCTATGCTCTATTATTGAGAATTCTGGACCATTCACGGATTCGGTACGGATGGTTCTTGAAGAGAGCACAATACCAGTTGGGGTGTTCCACAATATTGTCATGACTTCTCATCTAATGCCTTCCATAGACTTTGTGTCAGTAAATGATGATCCTGCTCTTTTATTTACCAATGCTTGGAAGGCTTTTGGTGATTTTGCAGAACCTTTTGGATGCCAAGTGTCTGACTTTAGCAAGAGGATGGTGTGGGAGTTGCCTGATTGTTCTATTGATAAACAGCTAATCCCGAGCCAATCTGCCAGGAGAAAACTGGCACTAGGAGATAGCGCAAGTAGACGTGTAAGGGACAATCAAACACATGAACCTAGTGGACAGTTCTCTCGAGGTTTAAATACACCTA-GTGCCTCTATAGGTCATACGCGTAGAGACACTTTCCGCCAGCGGAAACCGAACACAAGTAGA-CCACCTTCAATGCATGTTGATGACTATGTCGCAAGAGAGAGAAACATAGAAGGTGCAAGCAGTGCATCAAATATTGTAAGTTCTACTCCACGTGGAGCACTTAGTGGAAGGCCTCCATCCATTCATGTAGATGAATTTATGGCAAGACAGAGGGAACGTCAAAATCCTGTTCTAGCGCCATCTGGGGATGCAACTCAGGTAAGAAGTAAGGCAACTTTGGATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGATGATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATAAACTTCCTTTTCCTCAACCAGATGACAGTCTGCAATCACCACCTGTCATTATTGGGGAGAACTCTCCAGGTCCCGTTGTTGATGAGACAGAAAATCAGCAGAATGGAATAAATCTGTTTTCTGGTACAGTTGTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAAGAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTCCCCGATCATGCGGACGAATCTCCATTTATCTCTCCTACTACTGGATTGAAGGTTATACCTGGTTATAGCACACATGCTGCACAAGCAACACTGCGACAATTACCTCCAAATATGCATCGGAAAAGAAGCCCACATAAGCTGGCTGAGAGTTCGGTGTCCTCTGGATCTCATGGACATGATCGTACACTTTACAACAGCCAGCCACCTTTGCCACCGATGCCCCCACCAGTTTCTTCTACGTCTCTACAAAATCCTGATTCAATTCAAAGGCAACCATCATCTTACATTGCTAGAGATGGGCCACCACCTTTTCCTCCTAGNTA] [+] EMBL CB663165 [ATACTACTCGTAAGATTGATGCCGCAACTTGATCGACTTGCACGTGTCATTGACAATTTTGCTACTTCGGCCCTTACGGTGATACAAGATATGCTTCGTATCTTCATTGTCCGTATTGCCTCTGAAAAGATTGAATGTGCTGTTGTTCTTCTTCGTCCGATCTTTATTTGGTTAAACAACAAAGTTGATGAAACTTCACTGTCAGAGAGAGAGATCTTCAAGGTTCATCAGTTGCTTCAATTTATTGCAAAACTGTCAGAACATCCAAATGGCAAGGCATTGCTCTGTAAAATGGGAGTCGCAAGGATTCTTAGAAAGTTATTACAAGAGTGCAGCAGTATGTGTTATATGGAGGACAACATGATTTCTGATAAAGGGGTCTACTCAAATGATCTCCTTATGCTAAGATGGAAGATTCCTTTGTTGAGATCTATTGCATCCATCTTTAGTACCCGGCCATCTAGTAAAGAGCCGACTACTGTTGAAGAGCTTTGGAACGAGAATGCCTGTGTTGAAGAATGCTCTTCTATCATGTATCACCTCTTGATGTTATGCCAGGTTCTGCCAGTTGGACGGGATATGTTTGCATGTTCTCTGGCATTCAAGGAGGTTGCTTCTTCCTATTCCTGTAGAGGCGCAGTAACTTCAATATTTTCACAAATCCAAACTTCTAACAAAGATGAGTCCCAAAAAAGTGAGAGTGAGACCTGTCATGACACGTCAAAGGTGGATAATTGGTGTGGCTTTTTCCCTTTGTTGAAGTGCTGGAAGAGGCTCCTACAATATATT ] [+] EMBL CB670646 [ CATGACACGTCAAAGGTGGATAATTGGTGTGGCTTTTTCCCTTTGTTGAAGTGCTGGAAGAGGCTCCTACAATATATTTGTGCTAATCGTCCAACAGATTATTTGGTAGAAATAGTTTATGCCTTGACACTAGGTGCTATTGCCCTCAGCCAGTCTGGTCAAAATCTTGAAGGTACCATCATATTGAGGCGTCTATTTGGGCACCCCTCTGTTCCTAGTTCATCAGAGGCCTCTGATGAGGTTACTTTTTTATTGAAGACATTTCAAGAGAAGATATGCCAGGGGTTTGACAATTGGTCGCCTTACGTTGGGAAACCTCTTTTACATCAGGTACGGAGCTCTGTCAGATTGCTATGCTCTATTATTGAGAATTCTGGACCATTCACGGATTCGGTACGGATGGTTCTTGAAGAGAGCACAATACCAGTTGGGGTGTTCCACAATATTGTCATGACTTCTCATCTAATGCCTTCCATAGACTTTGTGTCAGTAAATGATGATCCTGCTCTTTTATTTACCAATGCTTGGAAGGCTTTTGGTGATTTTGCAGAACCTTTTGGATGCCAAGTGTCTGACTTTAGCAAGAGGATGGTGTGGGAGTTGCCTGATTGTTCTATTGATAAACAGCTAATCCCGAGCCAATCTGCCAGGAGAAAACTGGCACTAGGAGATAGCGCAAGTAGACGTGTAAGGGACAATCAAACACATGAACCTAGTGGACAGTTCTCTCGAGGTTTAAATACACCTA GTGCCTCTATAGGTCATACGCGTAGAGACACTTTCCGCCAGCGGAAACCGAACACAAGTAGACCCACCTTC ATGCA ] [+] EMBL CB627016 [ AACACATGAACCTAGTGGACAGTTCTCTCGAGGTTTAAATACACCTA GTGCCTCTATAGGTCATACGCGTAGAGACACTTTCCGCCAGCGGAAACCGAACACAAGTAGA CCACCTTCAATGCATGTTGATGACTATGTCGCAAGAGAGAGAAACATAGAAGGTGCAAGCAGTGCATCAAATATTGTAAGTTCTACTCCACGTGGAGCACTTAGTGGAAGGCCTCCATCCAT ] [+] EMBL CB676381 [ CCTATGTGCCTCTATAGGTCATACGCGTAGAGACACTTTCCGCCAGCGGAAACCGAACACAAGTAGA CCACCTTCAATGCATGTTGATGACTATGTCGCAAGAGAGAGAAACATAGAAGGTGCAAGCAGTGCATCAAATATTGTAAGTTCTACTCCACGTGGAGCACTTAGTGGAAGGCCTCCATCCATTCATGTAGATGAATTTATGGCAAGACAGAGGGAACGTCAAAATCCTGTTCTAGCGCCATCTGGGGATGCAACTCAGGTAAGAAGTAAGGCAACTTTGGATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGATGATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATAAACTTCCTTTTCCTCAACCAGATGACAGTCTGCAATCACCACCTGTCATTATTGGGGAGAACTCTCCAGGTCCCGTTGTTGATGAGACAGAAAATCAGCAGAATGGAATAAATCTGTTTTCTGGTACAGTTGTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAAGAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTCCCCGATCATGCGGACGAATCTCCATTTATCTCTCCTACTACTGGATTGAAGGTTATACCTGGTTATAGCACACATGCTGCACAAGCAACACTGCGACAATTACCTCCANATATGCATCGGAAAAGAAGCCCACATAAGCTGGCTGAGAGTTCGGTGTCCTCTGGATCTCATGGACATGATCGTACACTTT ] [+] EMBL CB668771 [ AAGTTCTACTCCACGTGGAGCACTTAGTGGAAGGCCTCCATCCATTCATGTAGATGAATTTATGGCAAGACAGAGGGAACGTCAAAATCCTGTTCTAGCGCCATCTGGGGATGCAACTCAGGTAAGAAGTAAGGCAACTTTGGATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGATGATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATAAACTTCCTTTTCCTCAACCAGATGACAGTCTGCAATCACCACCTGTCATTATTGGGGAGAACTCTCCAGGTCCCGTTGTTGATGAGACAGAAAATCAGCAGAATGGAATAAATCTGTTTTCTGGTACAGTTGTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAAGAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTCCCCGATCATGCGGACGAATCTCCATTTATCTCTCCTACTACTGGATTGAAGGTTATACCTGGTTATAGCACACATGCTGCACAAGCAACACTGCGACAATTACCTCCAAATATGCATCGGAAAAGAAGCCCACATAAGCTGGCTGAGAGTTCGGTGTCCTCTGGATCTCATGGACATGATCGTACACTTTACAACAGCCAGCCACCTTTGCCACCGATGCCCCCACCAGTTTCTTCTACGTCTCTACAAAATCCTGATTCAATTCAAAGGCAACCATCATCTTACATTGCTAGAGATGGGCCACCACCTTTTCCTCCTAGNTA] [+] EMBL CF306078 [ TCAGGTAACCAGTAAGGCAACTTTGGATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGATGATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATTTATTTTCTTTTCCTCAACCAGATGACAGTCTGCAATCACCACCTGTTTTTATTGGGGAGAACTCTCCAGGTCCCGTTGTTGATGAGACAGAAAATCAGCAGAATGGAATAAATCTGTTTTCTGGTACAGTTGTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAAGAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTCCCCGATCATGCGGACGAATCTCCATTTATCTCTCCTACTACTGGATTGAAGGTTATACCTGGTTATAGCACACATGCTGCACAAGCAACACTGCGACAATTACCTCCAAATATGCATCGGAAAAGAAGCCCACATAAGCTGGCTGAGAGTTCGGTGTCCTCTGGATCTCATGGACATGATCGTACACTNTACAACAGCCAGCCACCTTTGCCACCGATGCCCCCACCAGTTTCTTCTACGTCTCTACAAAATCCTGAT ] [+] EMBL CF305858 [ TCAGGTAACAAGTAAGGCAACTTTGGATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGATGATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATAAACTTTCTTTTCCTCAACCAGATGACAGTCTGCAATCACCACCTGTCATTATTGGGGAGAACTCTCCAGGGCCCGTTGGTGATGAGACAGAAAATCACCAGAATGGAATAAATCTGTTTTCTGGTACAGTTGTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAAGAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTCCCCGATCATGCGGACGAATCTCCATTTATCTCTCC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||