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Oryza sativa
cluster # 9961 cluster # 9961       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9961#0 length = 2423 sequences # 7  

consensusID : consensus_9961#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2423
fasta sequence
                              [ATACTACTCGTAAGATTGATGCCGCAACTTGATCGACTTGCACGTGTCATTGACAATTTTGCTACTTCGGCCCTTACGGTGATACAAGATATGCTTCGTATCTTCATTGTCCGTATTGCCTCTGAAAAGATTGAATGTGCTGTTGTTCTTCTTCGTCCGATCTTTATTTGGTTAAACAACAAAGTTGATGAAACTTCACTGTCAGAGAGAGAGATCTTCAAGGTTCATCAGTTGCTTCAATTTATTGCAAAACTGTCAGAACATCCAAATGGCAAGGCATTGCTCTGTAAAATGGGAGTCGCAAGGATTCTTAGAAAGTTATTACAAGAGTGCAGCAGTATGTGTTATATGGAGGACAACATGATTTCTGATAAAGGGGTCTACTCAAATGATCTCCTTATGCTAAGATGGAAGATTCCTTTGTTGAGATCTATTGCATCCATCTTTAGTACCCGGCCATCTAGTAAAGAGCCGACTACTGTTGAAGAGCTTTGGAACGAGAATGCCTGTGTTGAAGAATGCTCTTCTATCATGTATCACCTCTTGATGTTATGCCAGGTTCTGCCAGTTGGACGGGATATGTTTGCATGTTCTCTGGCATTCAAGGAGGTTGCTTCTTCCTATTCCTGTAGAGGCGCAGTAACTTCAATATTTTCACAAATCCAAACTTCTAACAAAGATGAGTCCCAAAAAAGTGAGAGTGAGACCTGTCATGACACGTCAAAGGTGGATAATTGGTGTGGCTTTTTCCCTTTGTTGAAGTGCTGGAAGAGGCTCCTACAATATATTTGTGCTAATCGTCCAACAGATTATTTGGTAGAAATAGTTTATGCCTTGACACTAGGTGCTATTGCCCTCAGCCAGTCTGGTCAAAATCTTGAAGGTACCATCATATTGAGGCGTCTATTTGGGCACCCCTCTGTTCCTAGTTCATCAGAGGCCTCTGATGAGGTTACTTTTTTATTGAAGACATTTCAAGAGAAGATATGCCAGGGGTTTGACAATTGGTCGCCTTACGTTGGGAAACCTCTTTTACATCAGGTACGGAGCTCTGTCAGATTGCTATGCTCTATTATTGAGAATTCTGGACCATTCACGGATTCGGTACGGATGGTTCTTGAAGAGAGCACAATACCAGTTGGGGTGTTCCACAATATTGTCATGACTTCTCATCTAATGCCTTCCATAGACTTTGTGTCAGTAAATGATGATCCTGCTCTTTTATTTACCAATGCTTGGAAGGCTTTTGGTGATTTTGCAGAACCTTTTGGATGCCAAGTGTCTGACTTTAGCAAGAGGATGGTGTGGGAGTTGCCTGATTGTTCTATTGATAAACAGCTAATCCCGAGCCAATCTGCCAGGAGAAAACTGGCACTAGGAGATAGCGCAAGTAGACGTGTAAGGGACAATCAAACACATGAACCTAGTGGACAGTTCTCTCGAGGTTTAAATACACCTA-GTGCCTCTATAGGTCATACGCGTAGAGACACTTTCCGCCAGCGGAAACCGAACACAAGTAGA-CCACCTTCAATGCATGTTGATGACTATGTCGCAAGAGAGAGAAACATAGAAGGTGCAAGCAGTGCATCAAATATTGTAAGTTCTACTCCACGTGGAGCACTTAGTGGAAGGCCTCCATCCATTCATGTAGATGAATTTATGGCAAGACAGAGGGAACGTCAAAATCCTGTTCTAGCGCCATCTGGGGATGCAACTCAGGTAAGAAGTAAGGCAACTTTGGATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGATGATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATAAACTTCCTTTTCCTCAACCAGATGACAGTCTGCAATCACCACCTGTCATTATTGGGGAGAACTCTCCAGGTCCCGTTGTTGATGAGACAGAAAATCAGCAGAATGGAATAAATCTGTTTTCTGGTACAGTTGTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAAGAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTCCCCGATCATGCGGACGAATCTCCATTTATCTCTCCTACTACTGGATTGAAGGTTATACCTGGTTATAGCACACATGCTGCACAAGCAACACTGCGACAATTACCTCCAAATATGCATCGGAAAAGAAGCCCACATAAGCTGGCTGAGAGTTCGGTGTCCTCTGGATCTCATGGACATGATCGTACACTTTACAACAGCCAGCCACCTTTGCCACCGATGCCCCCACCAGTTTCTTCTACGTCTCTACAAAATCCTGATTCAATTCAAAGGCAACCATCATCTTACATTGCTAGAGATGGGCCACCACCTTTTCCTCCTAGNTA]

[+] EMBL CB663165             [ATACTACTCGTAAGATTGATGCCGCAACTTGATCGACTTGCACGTGTCATTGACAATTTTGCTACTTCGGCCCTTACGGTGATACAAGATATGCTTCGTATCTTCATTGTCCGTATTGCCTCTGAAAAGATTGAATGTGCTGTTGTTCTTCTTCGTCCGATCTTTATTTGGTTAAACAACAAAGTTGATGAAACTTCACTGTCAGAGAGAGAGATCTTCAAGGTTCATCAGTTGCTTCAATTTATTGCAAAACTGTCAGAACATCCAAATGGCAAGGCATTGCTCTGTAAAATGGGAGTCGCAAGGATTCTTAGAAAGTTATTACAAGAGTGCAGCAGTATGTGTTATATGGAGGACAACATGATTTCTGATAAAGGGGTCTACTCAAATGATCTCCTTATGCTAAGATGGAAGATTCCTTTGTTGAGATCTATTGCATCCATCTTTAGTACCCGGCCATCTAGTAAAGAGCCGACTACTGTTGAAGAGCTTTGGAACGAGAATGCCTGTGTTGAAGAATGCTCTTCTATCATGTATCACCTCTTGATGTTATGCCAGGTTCTGCCAGTTGGACGGGATATGTTTGCATGTTCTCTGGCATTCAAGGAGGTTGCTTCTTCCTATTCCTGTAGAGGCGCAGTAACTTCAATATTTTCACAAATCCAAACTTCTAACAAAGATGAGTCCCAAAAAAGTGAGAGTGAGACCTGTCATGACACGTCAAAGGTGGATAATTGGTGTGGCTTTTTCCCTTTGTTGAAGTGCTGGAAGAGGCTCCTACAATATATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB670646             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATGACACGTCAAAGGTGGATAATTGGTGTGGCTTTTTCCCTTTGTTGAAGTGCTGGAAGAGGCTCCTACAATATATTTGTGCTAATCGTCCAACAGATTATTTGGTAGAAATAGTTTATGCCTTGACACTAGGTGCTATTGCCCTCAGCCAGTCTGGTCAAAATCTTGAAGGTACCATCATATTGAGGCGTCTATTTGGGCACCCCTCTGTTCCTAGTTCATCAGAGGCCTCTGATGAGGTTACTTTTTTATTGAAGACATTTCAAGAGAAGATATGCCAGGGGTTTGACAATTGGTCGCCTTACGTTGGGAAACCTCTTTTACATCAGGTACGGAGCTCTGTCAGATTGCTATGCTCTATTATTGAGAATTCTGGACCATTCACGGATTCGGTACGGATGGTTCTTGAAGAGAGCACAATACCAGTTGGGGTGTTCCACAATATTGTCATGACTTCTCATCTAATGCCTTCCATAGACTTTGTGTCAGTAAATGATGATCCTGCTCTTTTATTTACCAATGCTTGGAAGGCTTTTGGTGATTTTGCAGAACCTTTTGGATGCCAAGTGTCTGACTTTAGCAAGAGGATGGTGTGGGAGTTGCCTGATTGTTCTATTGATAAACAGCTAATCCCGAGCCAATCTGCCAGGAGAAAACTGGCACTAGGAGATAGCGCAAGTAGACGTGTAAGGGACAATCAAACACATGAACCTAGTGGACAGTTCTCTCGAGGTTTAAATACACCTA GTGCCTCTATAGGTCATACGCGTAGAGACACTTTCCGCCAGCGGAAACCGAACACAAGTAGACCCACCTTC ATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB627016             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACACATGAACCTAGTGGACAGTTCTCTCGAGGTTTAAATACACCTA GTGCCTCTATAGGTCATACGCGTAGAGACACTTTCCGCCAGCGGAAACCGAACACAAGTAGA CCACCTTCAATGCATGTTGATGACTATGTCGCAAGAGAGAGAAACATAGAAGGTGCAAGCAGTGCATCAAATATTGTAAGTTCTACTCCACGTGGAGCACTTAGTGGAAGGCCTCCATCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB676381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTATGTGCCTCTATAGGTCATACGCGTAGAGACACTTTCCGCCAGCGGAAACCGAACACAAGTAGA CCACCTTCAATGCATGTTGATGACTATGTCGCAAGAGAGAGAAACATAGAAGGTGCAAGCAGTGCATCAAATATTGTAAGTTCTACTCCACGTGGAGCACTTAGTGGAAGGCCTCCATCCATTCATGTAGATGAATTTATGGCAAGACAGAGGGAACGTCAAAATCCTGTTCTAGCGCCATCTGGGGATGCAACTCAGGTAAGAAGTAAGGCAACTTTGGATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGATGATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATAAACTTCCTTTTCCTCAACCAGATGACAGTCTGCAATCACCACCTGTCATTATTGGGGAGAACTCTCCAGGTCCCGTTGTTGATGAGACAGAAAATCAGCAGAATGGAATAAATCTGTTTTCTGGTACAGTTGTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAAGAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTCCCCGATCATGCGGACGAATCTCCATTTATCTCTCCTACTACTGGATTGAAGGTTATACCTGGTTATAGCACACATGCTGCACAAGCAACACTGCGACAATTACCTCCANATATGCATCGGAAAAGAAGCCCACATAAGCTGGCTGAGAGTTCGGTGTCCTCTGGATCTCATGGACATGATCGTACACTTT                                                                                                                                     ]
[+] EMBL CB668771             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGTTCTACTCCACGTGGAGCACTTAGTGGAAGGCCTCCATCCATTCATGTAGATGAATTTATGGCAAGACAGAGGGAACGTCAAAATCCTGTTCTAGCGCCATCTGGGGATGCAACTCAGGTAAGAAGTAAGGCAACTTTGGATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGATGATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATAAACTTCCTTTTCCTCAACCAGATGACAGTCTGCAATCACCACCTGTCATTATTGGGGAGAACTCTCCAGGTCCCGTTGTTGATGAGACAGAAAATCAGCAGAATGGAATAAATCTGTTTTCTGGTACAGTTGTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAAGAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTCCCCGATCATGCGGACGAATCTCCATTTATCTCTCCTACTACTGGATTGAAGGTTATACCTGGTTATAGCACACATGCTGCACAAGCAACACTGCGACAATTACCTCCAAATATGCATCGGAAAAGAAGCCCACATAAGCTGGCTGAGAGTTCGGTGTCCTCTGGATCTCATGGACATGATCGTACACTTTACAACAGCCAGCCACCTTTGCCACCGATGCCCCCACCAGTTTCTTCTACGTCTCTACAAAATCCTGATTCAATTCAAAGGCAACCATCATCTTACATTGCTAGAGATGGGCCACCACCTTTTCCTCCTAGNTA]
[+] EMBL CF306078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCAGGTAACCAGTAAGGCAACTTTGGATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGATGATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATTTATTTTCTTTTCCTCAACCAGATGACAGTCTGCAATCACCACCTGTTTTTATTGGGGAGAACTCTCCAGGTCCCGTTGTTGATGAGACAGAAAATCAGCAGAATGGAATAAATCTGTTTTCTGGTACAGTTGTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAAGAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTCCCCGATCATGCGGACGAATCTCCATTTATCTCTCCTACTACTGGATTGAAGGTTATACCTGGTTATAGCACACATGCTGCACAAGCAACACTGCGACAATTACCTCCAAATATGCATCGGAAAAGAAGCCCACATAAGCTGGCTGAGAGTTCGGTGTCCTCTGGATCTCATGGACATGATCGTACACTNTACAACAGCCAGCCACCTTTGCCACCGATGCCCCCACCAGTTTCTTCTACGTCTCTACAAAATCCTGAT                                                                 ]
[+] EMBL CF305858             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCAGGTAACAAGTAAGGCAACTTTGGATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGATGATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATAAACTTTCTTTTCCTCAACCAGATGACAGTCTGCAATCACCACCTGTCATTATTGGGGAGAACTCTCCAGGGCCCGTTGGTGATGAGACAGAAAATCACCAGAATGGAATAAATCTGTTTTCTGGTACAGTTGTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAAGAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTCCCCGATCATGCGGACGAATCTCCATTTATCTCTCC                                                                                                                                                                                                                                                                                                ]


>consensus_9961#0 ATACTACTCGTAAGATTGATGCCGCAACTTGATCGACTTGCACGTGTCATTGACAATTTT GCTACTTCGGCCCTTACGGTGATACAAGATATGCTTCGTATCTTCATTGTCCGTATTGCC TCTGAAAAGATTGAATGTGCTGTTGTTCTTCTTCGTCCGATCTTTATTTGGTTAAACAAC AAAGTTGATGAAACTTCACTGTCAGAGAGAGAGATCTTCAAGGTTCATCAGTTGCTTCAA TTTATTGCAAAACTGTCAGAACATCCAAATGGCAAGGCATTGCTCTGTAAAATGGGAGTC GCAAGGATTCTTAGAAAGTTATTACAAGAGTGCAGCAGTATGTGTTATATGGAGGACAAC ATGATTTCTGATAAAGGGGTCTACTCAAATGATCTCCTTATGCTAAGATGGAAGATTCCT TTGTTGAGATCTATTGCATCCATCTTTAGTACCCGGCCATCTAGTAAAGAGCCGACTACT GTTGAAGAGCTTTGGAACGAGAATGCCTGTGTTGAAGAATGCTCTTCTATCATGTATCAC CTCTTGATGTTATGCCAGGTTCTGCCAGTTGGACGGGATATGTTTGCATGTTCTCTGGCA TTCAAGGAGGTTGCTTCTTCCTATTCCTGTAGAGGCGCAGTAACTTCAATATTTTCACAA ATCCAAACTTCTAACAAAGATGAGTCCCAAAAAAGTGAGAGTGAGACCTGTCATGACACG TCAAAGGTGGATAATTGGTGTGGCTTTTTCCCTTTGTTGAAGTGCTGGAAGAGGCTCCTA CAATATATTTGTGCTAATCGTCCAACAGATTATTTGGTAGAAATAGTTTATGCCTTGACA CTAGGTGCTATTGCCCTCAGCCAGTCTGGTCAAAATCTTGAAGGTACCATCATATTGAGG CGTCTATTTGGGCACCCCTCTGTTCCTAGTTCATCAGAGGCCTCTGATGAGGTTACTTTT TTATTGAAGACATTTCAAGAGAAGATATGCCAGGGGTTTGACAATTGGTCGCCTTACGTT GGGAAACCTCTTTTACATCAGGTACGGAGCTCTGTCAGATTGCTATGCTCTATTATTGAG AATTCTGGACCATTCACGGATTCGGTACGGATGGTTCTTGAAGAGAGCACAATACCAGTT GGGGTGTTCCACAATATTGTCATGACTTCTCATCTAATGCCTTCCATAGACTTTGTGTCA GTAAATGATGATCCTGCTCTTTTATTTACCAATGCTTGGAAGGCTTTTGGTGATTTTGCA GAACCTTTTGGATGCCAAGTGTCTGACTTTAGCAAGAGGATGGTGTGGGAGTTGCCTGAT TGTTCTATTGATAAACAGCTAATCCCGAGCCAATCTGCCAGGAGAAAACTGGCACTAGGA GATAGCGCAAGTAGACGTGTAAGGGACAATCAAACACATGAACCTAGTGGACAGTTCTCT CGAGGTTTAAATACACCTAGTGCCTCTATAGGTCATACGCGTAGAGACACTTTCCGCCAG CGGAAACCGAACACAAGTAGACCACCTTCAATGCATGTTGATGACTATGTCGCAAGAGAG AGAAACATAGAAGGTGCAAGCAGTGCATCAAATATTGTAAGTTCTACTCCACGTGGAGCA CTTAGTGGAAGGCCTCCATCCATTCATGTAGATGAATTTATGGCAAGACAGAGGGAACGT CAAAATCCTGTTCTAGCGCCATCTGGGGATGCAACTCAGGTAAGAAGTAAGGCAACTTTG GATGACAATGTCTCTACCAAGCCAGAGAAACCGAGACAACCAAAGGCTGATCTTGATGAT GATCAAGAAATCAACATAATCTTTGATGAGGAGTCAGGATCAGATGATAAACTTCCTTTT CCTCAACCAGATGACAGTCTGCAATCACCACCTGTCATTATTGGGGAGAACTCTCCAGGT CCCGTTGTTGATGAGACAGAAAATCAGCAGAATGGAATAAATCTGTTTTCTGGTACAGTT GTATCTGAGAGTGATGAAGCTTGTGAAACTGTCATATCTTCACAGACAGCAATCCGTCAA GAATCTAACATCCCTTCTGAGCGAAAATTTTCAGTTTCTAGCCCAGAGAAGGTCATGTTC CCCGATCATGCGGACGAATCTCCATTTATCTCTCCTACTACTGGATTGAAGGTTATACCT GGTTATAGCACACATGCTGCACAAGCAACACTGCGACAATTACCTCCAAATATGCATCGG AAAAGAAGCCCACATAAGCTGGCTGAGAGTTCGGTGTCCTCTGGATCTCATGGACATGAT CGTACACTTTACAACAGCCAGCCACCTTTGCCACCGATGCCCCCACCAGTTTCTTCTACG TCTCTACAAAATCCTGATTCAATTCAAAGGCAACCATCATCTTACATTGCTAGAGATGGG CCACCACCTTTTCCTCCTAGNTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)