These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9966#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 587 fasta sequence [CGCCCCCTTGCCCACCGAGTCGCCCCTTTCCTCCGTCTTCGGCGACGGCGCCGAGGTCAGCAACGTGCCGCCGCTGACCGCCCCCAAGCTCTTCATCAGCGGCCTTTCAAGGTTAACGA-CGGATGAGAAGCTTAAAAATGCCTTTGCTCCCTTTGGGCAGCTACTTGAAGC-AAAAGTCA-TTACAGATAGGATTTCTGGAAGAT-CCAAGGGATTCGGTTTTGTTAGATATGCTACTTTAGAAGAAGCTGAGAATGCTCGGCAGGAGATGAACGCAAAGTTTCTGGATGGATGGGTTATTTTCGTTGATCCTGCTAAACCAAGGCAGCAGAAGCCTGCTCCTCGTCCTGACACTGATTCATCACACACT-GGCTTCACAACAAACAAAACTGTAGGATGGTGTGGTTAGTCACTGT-GGTGTTATAGCTAAAAAACTT--GGATACACATG-TTTCCATGCCTCATT-ACATTCCACAGTT-GTCT-ACAT-GTCTCATAATATTCT-GTAGTT-GTCTGATAGATATGTCATTCACATGGATTATAAGATGTTCATGATCATTGTTCTAAAAAATGAACNCC-AATTTACCGCCAAAAAA] [+] EMBL AU077776 [CGCCCCCTTGCCCACCGAGTCGCCCCTTTCCTCCGTCTTCGGCGACGGCGCCGAGGTCAGCAACGTGCCGCCGCTGACCGCCCCCAAGCTCTTCATCAGCGGCCTTTCAAGGTTAACGACCGGATGAGAAGCTTAAAAATGCCTTTGCTCCCTTTGGGCAGCTACTTGAAGC AAAAGTCA TTACAGATAGGATTTCTGGAAGATCCCAAGGGATTCGGTTTTGTTAGATATGCTACTTTAGAAGAAGCTGAGAATGCTCGGCAGGAGATGAACGCAAAGTTTCTGGATGGATGGGTTATTTTCGTTGATCCTGCTAAACCAAGGCAGCAGAAGCCTGCTCCTCGTCCTGACACTGATTCATCACACACT GGCTTCACAACAAACAAAACTGTAGGATGGTGTGGTTAGTCACTGT GGTGTTATAGCTAAAAAACTT GGATACACATG TTTCCATGCCTCATT ACATTCCACAGTT GTCT ACAT GTCTCATAATATTCT GTAGTT GTCTGATAGATATGTCATTCACATGGATTATAAGATGTTCATGATCATTGTTCTAAAAAA ] [+] EMBL AU077775 [CGCCCCCTTGCCCACCGAGTCGCCCCTTTCCTCCGTCTTCGGCGACGGCGCCGAGGTCAGCAACGTGCCGCCGCTGACCGCCCCCAAGCTCTTCATCAGCGGCCTTTCAAGGTTAACGA CGGATGAGAAGCTTAAAAATGCCTTTGCTCCCTTTGGGCAGCTACTTGAAGC AAAAGTCA TTACAGATAGGATTTCTGGAAGAT CCAAGGGATTCGGTTTTGTTAGATATGCTACTTTAGAAGAAGCTGAGAATGCTCGGCAGGAGATGAACGCAAAGTTTCTGGATGGATGGGTTATTTTCGTTGATCCTGCTAAACCAAGGCAGCAGAAGCCTGCTCCTCGTCCTGACACTGATTCATCACACACTGGGCTTCACAACAAACAAAACTGTAGGATGGTGTGGTTAGTCACTGTGGGTGTTATAGCTAAAAAACTTTGGGATACACATGNTTTCCATGCCTCATTAAAATTCCACAGTTGGTCTAAAATGGTCTCATAATAATCTGGTAGTTGGCCTGATAGATAatgg ] [+] EMBL CF279741 [CGCCCCCTTGCCCACCGAGTCGCCCCTTTCCTCCGTCTTCGGCGACGGCGCCGAGGTCAGCAACGTGCCGCCGCTGACCGCCCCCAAGCTCTTCATCAGCGGCCTTTCAAGGTTAACGA CGGATGAGAAGCTTAAAAATGCCTTTGCTCCCTTTGGGCAGCTACTTGAAGC AAAAGTCA TTACAGATAGGATTTCTGGAAGAT CCAAGGGATTCGGTTTTGTTAGATATGCTACTTTAGAAGAAGCTGAGAATGCTCGGCAGGAGATGAACGCAAAGTTTCTGGATGGATGGGTTATTTTCG ] [+] EMBL CF293278 [CGCCCCCTTGCCCACCGAGTCGCCCCTTTCCTCCGTCTTCGGCGACGGCGCCGAGGTCAGCAACGTGCCGCCGCTGACCGCCCCCAAGCTCTTCATCAGCGGCCTTTCAAGGCTAACGA CGGATGAGAAGCTTAAAAATGCCTTTGCTCCCTTTGGACAGCTACTTGAAGC AAAAGTCA TTACAGATAGGATTTCTGGAAGAT CCAAGGGATTCGGTTTTGTTA ] [+] EMBL BM419979 [ GTCAGC ACGTGCCGCCGCTGACCGCCCCCAAGCTCTTCATCAGCGGCCTTTCAAGGTTAACGA CGGATGAGAAGCTTAAAAATGCCTTTGCTCCCTTTGGGCAGCTACTTGAAGC CAAAGTCACTTACAGATAGGATTTCTGGAAGAT CCCAGGGATTCGGTTTTGTTAGATATGCTACTTTAGAAGAAGCTGAGAATGCTCGGCAGGAGATGAACGCCAAGTTTCTGGATGGATGGGTTATTTTCGTTGATCCTGCTAAACCAAGGCAGCAGAAGCCTGCTCCTCGTCCTGACACTGATTCATCACACACT GGCTTCACAACAAACAAAACTGTAGGATGGTGTGGTTAGTCACTGT GGTGTTATAGCTAAAAAACTT GGATACACATG TTTCCATGCCTCATT ACATTCCACAGTT GTCT ACAT GTCTCATAATATTCT GTA TT GTCTGATAGATATGTCATTCACATGGATTATAAGATGTTCATGATC TTGTTCTAAATATTGAACNCC AATTTACCGCCAAAAA ] [+] EMBL BM420141 [ CCGCCGCTGACCGCCCCCAAGCTCTTCATCAGCGGCCTTTCAAGGTTAACGA CGGATGAGAAGCTTAAAAATGCCTTTGCTCCCTTTGGGCAGCTACTTGAAGCNAAAAGTCA TTACAGATAGGATTTCTGGAAGAT CCAAGGGATTCGGTTTTGTTAGATATGCTACTTTAGAAGAAGCTGAGAATGCTCGGCAGGAGATGAACGCAAAGTTTCTGGATGGATGGGTTATTTTCGTTGATCCTGCTAAACCAAGGCAGCAGAAGCCTGCTCCTCGTCCTGACACTGATTCATCACACACT GGCTTCACAACAAACAAAACTGTAGGATGGTGTGGTTAGTCACTGT GGTGTTATAGCTAAAAAACTT GGATACACATG TTTCCATGCCTCATT ACATTCCACAGTT GTCT ACAT GTCTCATAATATTCT GTA TT GTCTGATAGATATGTCATTCACATGGATTATAAGATGTTCATGATCATTGTTCTAAATATTGAACACCAAATTTACCGCCAAAAAA] [-] EMBL CF279740 [ GGATGAGAAGCTTAAAAATGCCTTTGCTCCCTTTGGGCAGCTACTTGAAGC AAAAGTCA TTACAGATAGGATTTTTGGAAGAT CCAAGGGATTCGGTTTTGTTAGATATGCTACTTTAGAAGAAGCTGAGAATGCTCGGCAGGAGATGAACGCAAAGTTTCTGGATGGATGGGTTATTTTCGTTGATCCTGCTAAACCAAGGCAGCAGAAGCCTGCTCCTCGTCCTGACACTGATTCATCACACACT GGCTTCACAACAAACAAAACTGTAGGATGGTGTGGTTAGTCACTGT GGTGTTATAGCTAAAAAACTT GGATACACATG TTTCCATGCCTCATT ACATTCCACAGTT GTCT ACAT GTCTCATAATATTCT GTAGTT GTCTGATAGATATGTCATTCACGTGGATTATAAGATGTTCATGATCATTGTTCTAAAAAAaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||