These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10014#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 867 fasta sequence [CAAAAGACTAGTTTCAGAAGCCAATGATTCGATATAACCAAGAAGAAAAAATTCAACTAATGAAGAGCTGTCTACAGGTTGATACAACGATTCATTAACCTCAGCCTTAGATATATAATTTACTGTTTTTGGACAAGATTCTAAAGACAACTCGTCTTGTTTATGTGTAAGCTGAAGGTCATTAAGTACACCAGGATATATGTGGTTTAAAAGATTTGTAAAATGTGCAATAAACCACCAATTACTTAATTTTTCACTTGCTATACGAACAAATGAGAATAGATCCACGTGAAAAATGCTTGTGATTAAAGCATCGACGGACTGATCAAAGTTAGAGCCCGGTTCCATATTACCTTTCTTTGTTAAAGCAAGCCATTGGTCAAGATCACTGCTTAAACTATCAATATTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATAC-CTTCTTTTTCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGACCGTTAGAA-TTAGAATGCAGGACAAGCAAACTTGCTGCTTCCTGACACCTAGCTTGTAAAACCAAGCTTAAAACTGTTGGCCAAAAGTCCTTGTTGGTTTCCCATGATTTAAGATTATTCAGTTTATCATG] [+] EMBL CD155061 [CAAAAGACTAGTTTCAGAAGCCAATGATTCGATATAACCAAGAAGAAAAAATTCAACTAATGAAGAGCTGTCTACAGGTTGATACAACGATTCATTAACCTCAGCCTTAGATATATAATTTACTGTTTTTGGACAAGATTCTAAAGACAACTCGTCTTGTTTATGTGTAAGCTGAAGGTCATTAAGTACACCAGGATATATGTGGTTTAAAAGATTTGTAAAATGTGCAATAAACCACCAATTACTTAATTTTTCACTTGCTATACGAACAAATGAGAATAGATCCACGTGAAAAATGCTTGTGATTAAAGCATCGACGGACTGATCAAAGTTAGAGCCCGGTTCCATATTACCTTTCTTTGTTAAAGCAAGCCATTGGTCAAGATCACTGCTTAAACTATCAATATTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATT ] [-] EMBL CD191606 [ AAAGCAAGCCATTGGTCAAGATCACTGCTTAAACTATCAATATTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATACACTTCTTTTGCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGACCGTTAGAATTTAGAATGCAGGACAAGCAA ] [-] EMBL CD133778 [ GCCATTGGTCAAGATCACTGCTTAAACTATCAATATTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCGCCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATAC CTTCTTTTTCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGGCCGTTAGAA TTAGAATGCAGGACAAGCA ] [-] EMBL CD185138 [ GCCATTGGTCAAGATCACTGCTTAAACTATCAATACTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATAC CTTCTTTTTCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGACCGTTAGAA TTAGAATGCAGGACAAGCAA ] [-] EMBL CD133858 [ GCCATTGGTCAAGATCACTGCTTAAACTATCAATATTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATAC CTTCTTTTTCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGGCCGTTAGAA TTAGAATGCAGGACAAGCAA ] [-] EMBL CD191618 [ GCCATTGGTCAAGATCACTGCTTAAACTATCAATATTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATAC CTTCTTTTTCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGACCGTTAGAA TTAGAATGCAGGACAAGCAA ] [-] EMBL CD191619 [ GCCATTGGTCAAGATCACTGCTTAAACTATCAATATTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATAC CTTCTTTTTCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGACCGTTAGAA TTAGAATGCAGGACAAGCAA ] [-] EMBL CD131334 [ GCCATTGGTCAAGATCACTGCTTAAGCTATCAATATTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATAC CTTCTTTTTCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGACCGTTAGAA TTAGAATGCAGGACAAGCAA ] [-] EMBL CD133793 [ GCCATTGGTCAAGATCACTGCTTAAACTATCAATATTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATAC CTTCTTTTTCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGACCGTTAGAA TTAGAATGCAGGACAAGCA ] [-] EMBL CD185316 [ GCCATTGGTCAAGATCACTGCTTAAACTATCAATATTTACCAACTGGTCAGTGTAG AAACAAATGATACAAACCGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAGACTGAGCACCATACTCAGTCCACATAC CTTCTTTTTCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGACCGTTAGAA TTAGAATGCAGGACAAGCAA ] [-] EMBL CD131619 [ GCCATTGGTCAAGATCACTGCTTAAACTATCAATATTTACCAACTGGTCAGTGTAGAAAACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATAC CTTCTTTTTCGGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGACCGTTAGAA TTAGAATGCAGGACAAGCA ] [-] EMBL CD152080 [ AAACCAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAACCTGAGCACCATACTCAGTCCACATAC TCTCTcaggca ] [+] EMBL CD170984 [ ACAAATGATACAAAACGAAAAAACCATCCACGTGAACCTCTGGTTACGTCCGAAATTCGCAGGTCGTCCCAAATAGACGTGCGCCCCGATAAGATATTTACAATTAATTTTATGTATTCAACTGATGTTGGATCCCCACCAACATGATCGAATTCTCCTGAAGACAGTCGATGTTCACACTCTGACTGCCAGTAATTCCACGCCTGCGAAAACTGAGCACCATACTCAGTCCACATAC CTTCTTTTTCAGCATGAGAAGCGACTGGCATAGAAGCTAGAAGTTGACGTAGACTTCGGAGACCACGACCGTTAGAA TTAGAATGCAGGACAAGCAAACTTGCTGCTTCCTGACACCTAGCTTGTAAAACCAAGCTTAAAACTGTTGGCCAAAAGTCCTTGTTGGTTTCCCATGATTTAAGATTATTCAGTTTATCATG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||