cluster # 10035

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Schistosoma mansoni
cluster # 10035 cluster # 10035 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10035#0 length = 1309 sequences # 9
consensus_10035#1 length = 748 sequences # 2

consensus_10035#2 length = 392 sequences # 1
consensus_10035#3 length = 321 sequences # 1

consensusID : consensus_10035#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1309
fasta sequence

                              [TTTGTATATATTGCACATTTAATCAATTAAGATACAGAAAATATAAAGGTTAAGTTGATTGACAGGTACGTACAATAATTGGTATTGGTAAATGATTATATCTGACTGGACTGTCTTTTCCATTAGTAAACTGTGATGTCCAACTAACGTATGCCTGTCGAATTGCATTTTTAATAGTTTCACTATTATCTATGACACGCCACCGATCTTTTAAATTTACTTGACTACGATTACTATGTCGAAAGGATTGATGCCAGATTTGAGACCAACTTTTCGAACCAGGAGCATGCATTACTCCATGCCATAATGCTATAGATTCTTCAATTGTCCAAGGTGTTTTGTGTGATTTCCATTCCTCTTTCGGAAGACGGATTATATACTTCCGAACTTTCTCCTTACCTGGTGTTTGTAGTTGCTCAAGTGGTATTTCGTCACTGAATCGCCTCAAAGTATCCAAAGTAATAAAAACTGATGACAATTTAAGTAAATGTTGTTGAATGTTGACAAGACTGGATAAGTTTTTATTATCTGCTTTATTTAGATCCTGGTAATCTGTTTGCACCTGTTGAATGATCTGTATAATACCACTTTTATCATAAGCCAGTCTGTAAATATCATTGAACAAGTTTGAATCCACTTGAATATGCAATGAGATTAATGAGTTCTCAATATTAACACTGTCTTTCATTACTTCATATTCAGTTAATGTTTTTAATGCTGAAATACTTAAGGTGGTGCATGGGATTTTCGAATACGGCTCAAACACTTTTTCGAAATCCTCTTCAGAAGACAAAGACGTATTTGTGAAGTTGGTACAATGTAACATCTTGCTACAGTAATTCCTTAATTTACAACAATAATCAATCCAGCCAAACATACGTTTAGATGAAGTTTTCATTACAAACTTCAGATGATTTGAGAAATCTATCAGGGGTTTAGGTACTTCGGGACATCCCGATTTCAATTCATTTGT-AATAGCATCGATGACAGCAAACGTCTCCATTACTATATTGTTGACGATTCTAACCATGCGAATTTCTCCAGTGTTTTCATTGAGGACAGGAGAAAGTGAAGATGCGAATTGGTAGGTCCATTCAACAAAGGCATCCAGAAAGATGACTTTCAAATCATGAATATCCGCAAAAGTTAACGAGAACTCTTGAGCAACATCAAGAACCAGCAGAGAATCTGTGAGAAGTTTAAGATAAGAGATGTTATTTGTTTCCGATAGTAACTTGTGGATTGATTTGACGAAGTTATATGAAGGAACAATCATAACTACATCGCCCATCGATCAAGGTTANTGAGC]

[+] EMBL CD077030             [TTTGTATATATTGCACATTTAATCAATTAAGATACAGAAAATATAAAGGTTAAGTTGATTGACAGGTACGTACAATAATTGGTATTGGTAAATGATTATATCTGACTGGACTGTCTTTTCCATTAGTAAACTGTGATGTCCAACTAACGTATGCCTGTCGAATTGCATTTTTAATAGTTTCACTATTATCTATGACACGCCACCGATCTTTTAAATTTACTTGACTACGATTACTATGTCGAAAGGATTGATGCCAGATTTGAGACCAACTTTTCGAACCAGGAGCATGCATTACTCCATGCCATAATGCTATAGATTCTTCAATTGTCCAAGGTGTTTTGTGTGATTTCCATTCCTCTTTCGGAAGACGGATTATATACTTCCGAACTTTCTCCTTACCTGGTGTTTGTAGTTGCTCAAGTGGTATTTCGTCACTGAATCGCCTCAAAGTATCCAAAGTAATAAAAACTGATGACAATTTAAGTAAATGTTGTTGAATGTTGACAAGACTGGATAAGTTTTTATTATCTGCTTTATTTAGATCCTGGTAATCTGTTTGCACCTGTTGAATGATCTGTATAATACCACTTTTATCATAAGCCAGTCTGTAAATATCATTGAACAAGTTTGAATCCACTTGAATATGCAATGAGATTAATGAGTTCTCAATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD078801             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCCAAAGTAATAAAAACTGATGACAATNTAAGTAAATGTTGTTGAATGTTGACAAGACTGGATAAGTTTNTATTATCTGCTTTATTTAGATCCTGGTAATCTGTTTGCACCTGTTGAATGATCTGTATAATACCACTTTTATCATAAGCCAGTCTGTAAATATCATTGAACAAGTTTGAATCCACTTGAATATGTAATGAGATTAATGAGTTCTCAATATTAACACTGTCTTTCATTACTTCATATTCAGTTAATGTTTTTAATGCTGAAATACTTAAGGTGGTGCATGGGATTTTCGAATACGGCTCAAACACTTTTTCGAAATCCTCTTCAGAAGACAAAGACGTATTTGTGAAGTTGGTACAATGTAACATCTTGCTACAGTAATTCCTTAATTTACAACAATAATCAATCCAGCCAAACATACGTTTAGATGAAGTTTTCATTACAAACTTCAGATGATTTGAGAAATCTATCAGGGGTTTAGGTACTTCGGGACATCCCGATTTCAATTCATTTGT AATAGCATCGATGACAGCAAACGTCTCCATTACTATATTGTTGACGATTCTAACCATGCGAATTTCTCCAGTGTTTTCATTGAGGACAGGAGAA                                                                                                                                                                                                                                                  ]
[+] EMBL CD190040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      agtgattgTCCTGGTACTCTGTTTGCACCTGTTGAATGATCTGTATAATACCACTTTTTTCTTAACCCAGTCTGTAAATATCATTGAACAAGTTTGAATCCACTTGAATATGTAATGAGATTAATGAGTTCTCAATATTAACACTGTCTTTCATTACTTCATATTCAGTTAATGTTTTTAATGCTGAAATACTTAAGGTGGTGCATGGGATTTTCGAATACGGCTCAAACACTTTTTCGAAATCCTCTTCAGAAGACAAAGACGTATTTGTGAAGTTGGTACAATGTAACATCTTGCTACAGTAATTCCTTAATTTACAACAATAATCAATCCAGCCAAACATACGTTTAGATGAAGTTTTCATTACAAACTTCAGATGATTTGAGAAATCTATCAGGGGTTTAGGTACTTCGGGACATCCCGA TTCAATTCATTTGT AATAGCATCGATGACAGCAAACGTCTCCATTACTATATTGTTGACGATTCTAACCATGCGAATTTCTCCAATGGTTTCATTGAGGACAGGAAAAAGTGAAGATGCGAATTTGT                                                                                                                                                                                                                               ]
[-] EMBL CD132863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCACCTGTTGAATGATCTGTATAATACCACTTTTATCATAAGCCAGTCTGTAAATATCATTGAACAAGTTTGAATCCACTTGAATATGCAATGAGATTAATGAGTTCTCAATATTAACACTGTCTTTCATTACTTCATATTCAGTTAATGTTTTTAATGCTGAAATACTTAAGGTGGTGCATGGGATTTTCGAATACGGCTCAAACACTTTTTCGAAATCCTCTTCAGAAGACAAAGACGTATTTGTGAAGTTGGTACAATGTAACATCTTGCTACAGTAATTCCTTAATTTACAACAATAATCAATCCAGCCAAACATACGTTTAGATGAAGTTTTCATTACAAACTTCAGATGAGTTGAGAAATCTATCAGGGGTTTAGGTACTTCGGGACATCCCGATTTCAATTCATTTGT A                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD120078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTTTTTAATGCTGAAATACTTAAGGTGGTGCATGGGATTTTCGAATACGGCTCAAACACTTTTTCGAAATCCTCTTCAGAAGACAAAGACGTATTTGTGAAGTTGGTACAATGTAACATCTTGCTACAGTAATTCCTTAATTTACAACAATAATCAATCCAGCCAAACATACGTTTAGATGAAGTTTTCATTACAAACTTCAGATGATTTGAGAAATCTATCAGGGGTTTAGGTACTTCGGGACATCCCGATTTCAATTCATTTGT AATAGCATCGATGACAGCAAACGTCTCCATTACTATATTGTTGACGATTCTAACCATGCGAATGTCTCCAGTGTTTTCATTGAGGACAGGAG                                                                                                                                                                                                                                                    ]
[+] EMBL CD120276             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTTTTTAATGCTGAAATACTTAAGGTGGTGCATGGGATTTTCGAATACGGCTCAAACACTTTTTCGAAATCCTCTTCAGAAGACAAAGACGTATTTGTGAAGTTGGTACAATGTAACATCTTGCTACAGTAATTCCTTAATTTACAACAATAATCAATCCAGCCAAACATACGTTTAGATGAAGTTTTCATTACAAACTTCAGATGATTTGAGAAATCTAT                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL AA629476             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATGATTTGAG AATCTATCAGGGGTTTAGGTACTTCGGGACATCCCGATTTCAATTCATTTGT AATAGCATCGANGACAGC AACGTCTCCATTANTATATNGTTGNCGATTCTAACCATGCGAATTTCTCCAGTGTTTTCATTGAGGACAGGAGAAAGTGAAGATGCGAATTGGTAGGTCCATTCAACTAAGNNANAAAAAAAGANGACTTTCAAATCATGAATATCCGCAAAAGTTAACGAGAACTCTTGAGCAACATCAAGNACCAGCAGAGAATTTGTGAGAGTTTTANGATAAGAGATGTTANTTGTTTCCGATAGTAACTTGTGGATTGATTTGACGAAGTTATATGAAGGAACAATCATAACTACATCGCCCATCGATCAAGGTTANTGAGC]
[-] EMBL CD120199             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGGACATCCCGATTTCAATTCA TTGTNAATAGCATCGATGACAGCAAACGTCTCCATTACTATATCGTTGACGATTCTAACCACGCGAATTTCTCCAGTGTTTTCATTGAGGACAGGAGAAAGTGAAGATGCGAATTGGTAGGTCCATTCAACAAAGGCATCCAGAAAGATGACTTTCAAATCATGAATATCCGCAAAAGTTAACGAGAACTCTTGAGCAACATCAAGAACCAGCAGAGAATCTGTGAGAAGTTTAAGATAAGAGATGTTATTTGTTTCCGATAGTAACTTGTGGATTGATTTG                                                           ]
[-] EMBL CD120180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGACAGCAAACGTCTTCATTACTATATTGTTGACGATTCTAACCATGCGAATTTCTCCAGTGTCTTCATTGAGGACAGGAGAAAGTGAAGATGCGAATTGGTAGGTCCATTCAACAAAGGCATCCAGAAAGATGACTTTCAAATCATGAATATCCGCAAAAGTTAACGAGAACTCTTGAGCAACATCAAGAACCAGCAGAGAATCTGTGAGAAGTTTAAGATAAGAGATGTTATTTGTTTCCGATAGTAACTTGTGGATTGATTTG                                                           ]




>consensus_10035#0
TTTGTATATATTGCACATTTAATCAATTAAGATACAGAAAATATAAAGGTTAAGTTGATT
GACAGGTACGTACAATAATTGGTATTGGTAAATGATTATATCTGACTGGACTGTCTTTTC
CATTAGTAAACTGTGATGTCCAACTAACGTATGCCTGTCGAATTGCATTTTTAATAGTTT
CACTATTATCTATGACACGCCACCGATCTTTTAAATTTACTTGACTACGATTACTATGTC
GAAAGGATTGATGCCAGATTTGAGACCAACTTTTCGAACCAGGAGCATGCATTACTCCAT
GCCATAATGCTATAGATTCTTCAATTGTCCAAGGTGTTTTGTGTGATTTCCATTCCTCTT
TCGGAAGACGGATTATATACTTCCGAACTTTCTCCTTACCTGGTGTTTGTAGTTGCTCAA
GTGGTATTTCGTCACTGAATCGCCTCAAAGTATCCAAAGTAATAAAAACTGATGACAATT
TAAGTAAATGTTGTTGAATGTTGACAAGACTGGATAAGTTTTTATTATCTGCTTTATTTA
GATCCTGGTAATCTGTTTGCACCTGTTGAATGATCTGTATAATACCACTTTTATCATAAG
CCAGTCTGTAAATATCATTGAACAAGTTTGAATCCACTTGAATATGCAATGAGATTAATG
AGTTCTCAATATTAACACTGTCTTTCATTACTTCATATTCAGTTAATGTTTTTAATGCTG
AAATACTTAAGGTGGTGCATGGGATTTTCGAATACGGCTCAAACACTTTTTCGAAATCCT
CTTCAGAAGACAAAGACGTATTTGTGAAGTTGGTACAATGTAACATCTTGCTACAGTAAT
TCCTTAATTTACAACAATAATCAATCCAGCCAAACATACGTTTAGATGAAGTTTTCATTA
CAAACTTCAGATGATTTGAGAAATCTATCAGGGGTTTAGGTACTTCGGGACATCCCGATT
TCAATTCATTTGTAATAGCATCGATGACAGCAAACGTCTCCATTACTATATTGTTGACGA
TTCTAACCATGCGAATTTCTCCAGTGTTTTCATTGAGGACAGGAGAAAGTGAAGATGCGA
ATTGGTAGGTCCATTCAACAAAGGCATCCAGAAAGATGACTTTCAAATCATGAATATCCG
CAAAAGTTAACGAGAACTCTTGAGCAACATCAAGAACCAGCAGAGAATCTGTGAGAAGTT
TAAGATAAGAGATGTTATTTGTTTCCGATAGTAACTTGTGGATTGATTTGACGAAGTTAT
ATGAAGGAACAATCATAACTACATCGCCCATCGATCAAGGTTANTGAGC

consensusID : consensus_10035#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 748
fasta sequence

                              [TTTGTATATATTGCACATTTAATCAATTAAGATACAGAAAATATAAAGGTTAAGTTGATTGACAGGTACGTACAATAATTGGTATTGGTAAATGATTATATCTGACTGGACTGTCTTTTCCATTAGTAAACTGTGATGTCCAACTAACGTATGCCTGTCGAATTGCATTTTTAATAGTTTCACTATTATCTATGACACGCCACCGATCTTTTAAATTTACTTGACTACGATTACTATGTCGAAAGGATTGATGCCAGATTTGAGACCAACTTTTCGAACCAGGAGCATGCATTACTCCATGCCATAATGCTATAGATTCTTCAATTGTCCAAGGTGTTTTGTGTGATTTCCATTCCTCTTTCGGAAGACGGATTATATACTTCCGAACTTTCTCCTTACCTTTACGGACAGGTGTACATATTGATGTTGAGGGTGATGGTCCACAAAATCGTTCAAAGCAACATTTGTCAACTAATTTTCTTCCTTTTCGTTCACAATTNCATATCGGTGTTTTCATTACCACTAATTATGNGGTGTATGTTTCAATTTCTTACTATCGGTTAAAATTACTGGTGTTTGTAGTTGCTCAAGTGGTATTTCGTCACTGAATCGCCTCAAAGTATCCAAAGTAATAAAAACTGATGACAATTTAAGTAAATGTTGTTGAATGTTGACAAGACTGGATAAGTTTTTATTATCTGCTTTATTTAGATCCAAAGACGTATTCCTCGTGCCGAATTCTGGCCGC]

[+] EMBL CD073261             [TTTGTATATATTGCACATTTAATCAATTAAGATACAGAAAATATAAAGGTTAAGTTGATTGACAGGTACGTACAATAATTGGTATTGGTAAATGATTATATCTGACTGGACTGTCTTTTCCATTAGTAAACTGTGATGTCCAACTAACGTATGCCTGTCGAATTGCATTTTTAATAGTTTCACTATTATCTATGACACGCCACCGATCTTTTAAATTTACTTGACTACGATTACTATGTCGAAAGGATTGATGCCAGATTTGAGACCAACTTTTCGAACCAGGAGCATGCATTACTCCATGCCATAATGCTATAGATTCTTCAATTGTCCAAGGTGTTTTGTGTGATTTCCATTCCTCTTTCGGAAGACGGATTATATACTTCCGAACTTTCTCCTTACCTTTACGGACAGGTGTACATATTGATGTTGAGGGTGATGGTCCACAAAATCGTTCAAAGCAACATTTGTCAACTAATTTTCTTCCTTTTCGTTCACAATTNCATATCGGTGTTTTCATTACCACTAATTATGNGGTGTATGTTTCAATTTCTTACTATCGGTTAAAATTACTGGTGTTTGTAGTTGCTCAAGTGGTATTTCGTCACT                                                                                                                                              ]
[-] EMBL CD077792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCAACATTTGTCAACTAATTTTCTTCCTTTTCGTTCACAATT CATATCGGTGTTTTCATTACCACTAATTATG GGTGTATGTTTCAATTTCTTACTATCGGTTAAAATTACTGGTGTTTGTAGTTGCTCAAGTGGTATTTCGTCACTGAATCGCCTCAAAGTATCCAAAGTAATAAAAACTGATGACAATTTAAGTAAATGTTGTTGAATGTTGACAAGACTGGATAAGTTTTTATTATCTGCTTTATTTAGATCCAAAGACGTATTCCTCGTGCCGAATTCTGGCCGC]




>consensus_10035#1
TTTGTATATATTGCACATTTAATCAATTAAGATACAGAAAATATAAAGGTTAAGTTGATT
GACAGGTACGTACAATAATTGGTATTGGTAAATGATTATATCTGACTGGACTGTCTTTTC
CATTAGTAAACTGTGATGTCCAACTAACGTATGCCTGTCGAATTGCATTTTTAATAGTTT
CACTATTATCTATGACACGCCACCGATCTTTTAAATTTACTTGACTACGATTACTATGTC
GAAAGGATTGATGCCAGATTTGAGACCAACTTTTCGAACCAGGAGCATGCATTACTCCAT
GCCATAATGCTATAGATTCTTCAATTGTCCAAGGTGTTTTGTGTGATTTCCATTCCTCTT
TCGGAAGACGGATTATATACTTCCGAACTTTCTCCTTACCTTTACGGACAGGTGTACATA
TTGATGTTGAGGGTGATGGTCCACAAAATCGTTCAAAGCAACATTTGTCAACTAATTTTC
TTCCTTTTCGTTCACAATTNCATATCGGTGTTTTCATTACCACTAATTATGNGGTGTATG
TTTCAATTTCTTACTATCGGTTAAAATTACTGGTGTTTGTAGTTGCTCAAGTGGTATTTC
GTCACTGAATCGCCTCAAAGTATCCAAAGTAATAAAAACTGATGACAATTTAAGTAAATG
TTGTTGAATGTTGACAAGACTGGATAAGTTTTTATTATCTGCTTTATTTAGATCCAAAGA
CGTATTCCTCGTGCCGAATTCTGGCCGC

consensusID : consensus_10035#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 392
fasta sequence

                              [CAACGAATCTATGGAAGGTTAATAATCTATTTTACTTGAAATTGATTGAAAAATAATTTTTACGGTAATGGATTAATTGTCTAGAAAAAAGTATTACTACGATTATAGACATATATATCGCAAGAACATTTTATTTCCCGATCGATTGGTTAACGAATGTGTACATAGTCTCCGGGACACTTATCAATAAAATGTACTAACTTTGTTGAATATAACAAAAAGTTTTAAACACATGGAGGTTTCCCGGTATATATACCTGGTGTTTGTAGTTGCTCAAGTGGTATTTCGTCACTGAATCGCCTCAGAGTATCCAAAGTAATAAAAACTGATGACAATTTAAGTAAATGTTGTTGAATGTTGACAAGACTGGATAAGTTTTTATTATCTGCTTT]

[-] EMBL CD178874             [CAACGAATCTATGGAAGGTTAATAATCTATTTTACTTGAAATTGATTGAAAAATAATTTTTACGGTAATGGATTAATTGTCTAGAAAAAAGTATTACTACGATTATAGACATATATATCGCAAGAACATTTTATTTCCCGATCGATTGGTTAACGAATGTGTACATAGTCTCCGGGACACTTATCAATAAAATGTACTAACTTTGTTGAATATAACAAAAAGTTTTAAACACATGGAGGTTTCCCGGTATATATACCTGGTGTTTGTAGTTGCTCAAGTGGTATTTCGTCACTGAATCGCCTCAGAGTATCCAAAGTAATAAAAACTGATGACAATTTAAGTAAATGTTGTTGAATGTTGACAAGACTGGATAAGTTTTTATTATCTGCTTT]




>consensus_10035#2
CAACGAATCTATGGAAGGTTAATAATCTATTTTACTTGAAATTGATTGAAAAATAATTTT
TACGGTAATGGATTAATTGTCTAGAAAAAAGTATTACTACGATTATAGACATATATATCG
CAAGAACATTTTATTTCCCGATCGATTGGTTAACGAATGTGTACATAGTCTCCGGGACAC
TTATCAATAAAATGTACTAACTTTGTTGAATATAACAAAAAGTTTTAAACACATGGAGGT
TTCCCGGTATATATACCTGGTGTTTGTAGTTGCTCAAGTGGTATTTCGTCACTGAATCGC
CTCAGAGTATCCAAAGTAATAAAAACTGATGACAATTTAAGTAAATGTTGTTGAATGTTG
ACAAGACTGGATAAGTTTTTATTATCTGCTTT

consensusID : consensus_10035#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 321
fasta sequence

                              [ACTGGGACACCCTGCCGTAATTTACAACAATAATCAATCCAGCCAAACATACGTTTAGATGAAGTTTTCATTACAAACTTCAGATGATTTGAGAAATCTATCAGGGGTTTAGGTACTTCGGGACATCCCGATTTCAATTCATTTGTAATAGCATCGATGACAGCAAACGTCTCCATTACTATTTTGTTGACGATTCTAACCATGCGAATTTCTCCAGTGTTTTCATTGAGGACAGGAGAAAGTGAAGATGCGAATTGGTAGGTCCATTCAACAAAGGCATCCAGAAAGATGACTTTCAAATCATGAATATCCGCANAAGTT]

[+] EMBL CD059240             [ACTGGGACACCCTGCCGTAATTTACAACAATAATCAATCCAGCCAAACATACGTTTAGATGAAGTTTTCATTACAAACTTCAGATGATTTGAGAAATCTATCAGGGGTTTAGGTACTTCGGGACATCCCGATTTCAATTCATTTGTAATAGCATCGATGACAGCAAACGTCTCCATTACTATTTTGTTGACGATTCTAACCATGCGAATTTCTCCAGTGTTTTCATTGAGGACAGGAGAAAGTGAAGATGCGAATTGGTAGGTCCATTCAACAAAGGCATCCAGAAAGATGACTTTCAAATCATGAATATCCGCANAAGTT]




>consensus_10035#3
ACTGGGACACCCTGCCGTAATTTACAACAATAATCAATCCAGCCAAACATACGTTTAGAT
GAAGTTTTCATTACAAACTTCAGATGATTTGAGAAATCTATCAGGGGTTTAGGTACTTCG
GGACATCCCGATTTCAATTCATTTGTAATAGCATCGATGACAGCAAACGTCTCCATTACT
ATTTTGTTGACGATTCTAACCATGCGAATTTCTCCAGTGTTTTCATTGAGGACAGGAGAA
AGTGAAGATGCGAATTGGTAGGTCCATTCAACAAAGGCATCCAGAAAGATGACTTTCAAA
TCATGAATATCCGCANAAGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10035#0      TTTGTATATATTGCACATTTAATCAATTAAGATACAGAAAATATAAAGGTTAAGTTGATT 60
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ------------------------------------------------------------
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      GACAGGTACGTACAATAATTGGTATTGGTAAATGATTATATCTGACTGGACTGTCTTTTC 120
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ------------------------------------------------------------
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      CATTAGTAAACTGTGATGTCCAACTAACGTATGCCTGTCGAATTGCATTTTTAATAGTTT 180
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ------------------------------------------------------------
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      CACTATTATCTATGACACGCCACCGATCTTTTAAATTTACTTGACTACGATTACTATGTC 240
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ------------------------------------------------------------
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      GAAAGGATTGATGCCAGATTTGAGACCAACTTTTCGAACCAGGAGCATGCATTACTCCAT 300
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ------------------------------------------------------------
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      GCCATAATGCTATAGATTCTTCAATTGTCCAAGGTGTTTTGTGTGATTTCCATTCCTCTT 360
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ------------------------------------------------------------
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      TCGGAAGACGGATTATATACTTCCGAACTTTCTCCTTACCTGGTGTTTGTAGTTGCTCAA 420
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ------------------------------------------------------------
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      GTGGTATTTCGTCACTGAATCGCCTCAAAGTATCCAAAGTAATAAAAACTGATGACAATT 480
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ------------------------------------------------------------
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      TAAGTAAATGTTGTTGAATGTTGACAAGACTGGATAAGTTTTTATTATCTGCTTTATTTA 540
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ------------------------------------------------------------
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      GATCCTGGTAATCTGTTTGCACCTGTTGAATGATCTGTATAATACCACTTTTATCATAAG 600
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ------------------------------------------------------------
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      CCAGTCTGTAAATATCATTGAACAAGTTTGAATCCACTTGAATATGCAATGAGATTAATG 660
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      -----------------------------------------------------------T 1
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      AGTTCTCAATATTAACACTGTCTTTCATTACTTCATATTCAGTTAATGTTTTTAATGCTG 720
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      TTGTATATATTGCACATTTAATCAATTAAGATACAGAAAATATAAAGGTTAAGTTGATTG 61
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      AAATACTTAAGGTGGTGCATGGGATTTTCGAATACGGCTCAAACACTTTTTCGAAATCCT 780
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ACAGGTACGTACAATAATTGGTATTGGTAAATGATTATATCTGACTGGACTGTCTTTTCC 121
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      CTTCAGAAGACAAAGACGTATTTGTGAAGTTGGTACAATGTAACATCTTGCTACAGTAAT 840
consensus_10035#3      ----------------------------------------------ACTGGGACACCC-T 13
consensus_10035#1      ATTAGTAAACTGTGATGTCCAACTAACGTATGCCTGTCGAATTGCATTTTTAATAGTTTC 181
consensus_10035#2      -------------------------------------CAACGAATCTATGGAAGGTTAAT 23
                                                                       *   *       

consensus_10035#0      TCCTTAATTTACAACA-ATAATCAATCCAGCCAAACATACGTT--TAGATGAAGTTTTCA 897
consensus_10035#3      GCCGTAATTTACAACA-ATAATCAATCCAGCCAAACATACGTT--TAGATGAAGTTTTCA 70
consensus_10035#1      ACTATTATCTATGACACGCCACCGATCTT-TTAAATTTACTTG--ACTACGATTACTATG 238
consensus_10035#2      AATCTATTTTACTTGAAATTGATTGAAAAATAATTTTTACGGTAATGGATTAATTGTCTA 83
                           *  * **    *                *    ***        *  *    *   

consensus_10035#0      TTACAAACTTCAGAT---GATTTGAGA--AATCT-----ATCAGGGGTTTAGGT-ACTTC 946
consensus_10035#3      TTACAAACTTCAGAT---GATTTGAGA--AATCT-----ATCAGGGGTTTAGGT-ACTTC 119
consensus_10035#1      TCGAAAGGATTGATGCCAGATTTGAGACCAACTTTTCGAACCAGGAGCATGCATTACTCC 298
consensus_10035#2      GAAAAAAGTATTACTAC-GATTATAGACATATAT-----ATCGCAAGAACATTTTATTTC 137
                           **            ****  ***   *  *     * *    *      * * * *

consensus_10035#0      GGGACATCCCGATT--TCAATTCATTTGTAATAGCATCGA----TGACAGCAAACGTCTC 1000
consensus_10035#3      GGGACATCCCGATT--TCAATTCATTTGTAATAGCATCGA----TGACAGCAAACGTCTC 173
consensus_10035#1      ATGCCATAATGCTA--TAGATTC--TTCAATTGTCCAAGG----TGTTTTGTGTGATTTC 350
consensus_10035#2      CCGATCGATTGGTTAACGAATGTGTACATAGTCTCCGGGACACTTATCAATAAAATGTAC 197
                         *       * *      **        * *  *   *     *              *

consensus_10035#0      CATTACTATATTGTT-GACG----ATTCTAACCATGCGAAT-TTCTCCAGTGTTTTCATT 1054
consensus_10035#3      CATTACTATTTTGTT-GACG----ATTCTAACCATGCGAAT-TTCTCCAGTGTTTTCATT 227
consensus_10035#1      CATTCCTCTTTCGGAAGACGG---ATTATATACTTCCGAAC-TTTCTCCTTACCTTTAC- 405
consensus_10035#2      TAACTTTGTTGAATATAACAAAAAGTTTTAAACACATGGAGGTTTCCCGGTATATATACC 257
                        *    * *        **      ** **  *    * *  **   *  *   *  *  

consensus_10035#0      GAGGACAGGAGAAAGTGAAGATGCGAATTGGTAGGTCCATTCAACAAAGGCATCCAGAAA 1114
consensus_10035#3      GAGGACAGGAGAAAGTGAAGATGCGAATTGGTAGGTCCATTCAACAAAGGCATCCAGAAA 287
consensus_10035#1      --GGACAGGTGTACATATTGATG----TTGAGGGTGATGGTCCACAAAATCGTTCAAAGC 459
consensus_10035#2      TGGTGTTTGTAGTTGCTCAAGTGGTATTTCGTCACTGAATCGCCTCAGAGTATCCAAAGT 317
                         *     *            **    **                 *     * ** *  

consensus_10035#0      GATGACTTTCAAATCATGAATATCCGCAAAAGT-TAACGAGAACTCTTGAGCAACATCAA 1173
consensus_10035#3      GATGACTTTCAAATCATGAATATCCGCANAAGT-T------------------------- 321
consensus_10035#1      AACATTTGTCAACTAATTTTCTTCCTTTTCGTT-CACAATTNCATATCGGTGTTTTCATT 518
consensus_10035#2      AATAAA----AACTGATGACAATTTAAGTAAATGTTGTTGAATGTTGACAAGACTGGATA 373
                        *        ** * **     *         *                           

consensus_10035#0      GAACCAGCAGAGAATCTGTGAGAAGTTTAAGATAAGAGATGTTATTTGTTTCCGATAGTA 1233
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      ACCACTAATTATGNGGTGTATGTTTCAATTTCTTACTATCGGTTAAAATTACTGGTGTTT 578
consensus_10035#2      AGTTTTTATTATCTGCTTT----------------------------------------- 392
                                                                                   

consensus_10035#0      ACTTGTGGATTGATTTGACGAAGTTATATGAAGGAACAATCATAACTACATCGCCCATCG 1293
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      GTAGTTGCTCAAGTGGTATTTCGTCACTGAATCGCCTCAAAGTATCCAAAGTAATAAAAA 638
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      ATCAAGGTTANTGAGC-------------------------------------------- 1309
consensus_10035#3      ------------------------------------------------------------
consensus_10035#1      CTGATGACAATTTAAGTAAATGTTGTTGAATGTTGACAAGACTGGATAAGTTTTTATTAT 698
consensus_10035#2      ------------------------------------------------------------
                                                                                   

consensus_10035#0      --------------------------------------------------
consensus_10035#3      --------------------------------------------------
consensus_10035#1      CTGCTTTATTTAGATCCAAAGACGTATTCCTCGTGCCGAATTCTGGCCGC 748
consensus_10035#2      --------------------------------------------------