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Schistosoma mansoni
cluster # 10036 cluster # 10036       Sequences # 13       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10036#0 length = 1467 sequences # 5  
consensus_10036#1 length = 675 sequences # 3  
consensus_10036#2 length = 592 sequences # 3  
consensus_10036#3 length = 355 sequences # 2  

consensusID : consensus_10036#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1467
fasta sequence
                              [CGAAACTTGCAATGGAGAAGGTTTCATCTGTTCCTTTCTACTTAGCATATTCAACTATGCAGTTGAATCTAAAGTTGCAGAACAAGAAAAAAATATATACGACAATTCAAGTATTTGGGATTTTATATTCTTCAATAAAATTAGACAAACTTTGGGTGGTCGTGTCAAAGTAATAGTTTCTGGTAGTGCACCCGTTGCAAATGAAATTTTACGTTTTACACGGGGAGTTTTTGGCTGTCCAGTAATAGTTGGCTATGGTTTTAGTGAATCATGTGGCGTTATTAGTCTTACACTGTTTGGCGATAAAAGCCTGGGTCATGTCGGTGCTCTTATTCCAGGAATTTCAGCCAAACTGGTAGATGTACCGTATATGGGTATCAGCGTTGAGAAAATGAAAATGGGTGAAGTATGTGTCAAAGGCCTAAATTGTACTCAGGGGTATTACAGTGATGAAGAAAGCACAAAACAGCTCATTGACAAAGATGGATGGTTGCATACTGGTGATATTGGCACTTGGACGAAAGAAGGTTCTTTAAAAATTGTCGACAGGTGTAAAAACATATTTAAACTCTCACAAGGCGAATATATTGCACCAGAAAGATTGGAAAATATCTATCAACTCAGTCCACTAGTTGAACAAATCTTTGTTGATGGCAATTCATTTTACGATTTTCCAATAGCTGTAGTTGTACCAAATATCAAAGAGTTGACTAAGCGCATACTGTCTAAGGCGAATTTCAATGACTCATTGTTATTGAACGGTAATAAAGGAGAGGCTGAGGCTTCCAAATACAAATTGAATGATTCTAATCCAATAGTCGATACTCCAACGTTATGTTCACAGCCCGCAGCACGTAAAATTGTCGTTTCAGAATTAGAAAA-TTAGGAAGGAAAAGAGGACTAAAGGGATTTGAGATAGTAAGATTTTTGCAACAGTTTTTTTTAATGAGATTTTGGTCTTGTGTTTCTAAGCAGTTTCAGTAATAGTCTTATATATCTTGTCCTCGGACTACTTTTTCCATTAATCTGTGATTCTAAGATCTTTTGTTCTCAGTTCCTGAACTAAAATCAAGGCACGGATTATGGTAGCTGTTTTTTGAGGATGAGACTATTCTCGAAAAACCTTCAAATTCAAAATGTTTGGAGAAAAGATGTTAAAGTCGATATTTTATGTGGTAATCTTTCATTCAGATTCANATTAAACGTGTTTACCTTTCTTCGATTCCATTCACTGTGGAAAATGGTTTAGTCACATCCAATTTCANACTAGCGAGAACTCGACTACGGGAAACCTTCTCAGATAGATTACGTTTGTTGTACGAAGAAGCCAGCGCATAATATCATATTACTGTTTTATTNCTATTNNGAATCTGAATACATAATGTGATGCATAGATACATAAATATCNTCTTTAAAAAGTCACATNCTTNCCACTACATTNTATAGNTACTTCTATATAANTCATTA]

[+] EMBL CD082405             [CGAAACTTGCAATGGAGAAGGTTTCATCTGTTCCTTTCTACTTAGCATATTCAACTATGCAGTTGAATCTAAAGTTGCAGAACAAGAAAAAAATATATACGACAATTCAAGTATTTGGGATTTTATATTCTTCAATAAAATTAGACAAACTTTGGGTGGTCGTGTCAAAGTAATAGTTTCTGGTAGTGCACCCGTTGCAAATGAAATTTTACGTTTTACACGGGGAGTTTTTGGCTGTCCAGTAATAGTTGGCTATGGTTTTAGTGAATCATGTGGCGTTATTAGTCTTACACTGTTTGGCGATAAAAGCCTGGGTCATGTCGGTGCTCTTATTCCAGGAATTTCAGCCAAACTGGTAGATGTACCGTATATGGGTATCAGCGTTGAGAAAATGAAAATGGGTGAAGTATGTGTCAAAGGCCTAAATTGTACTCAGGGGTATTACAGTGATGAAGAAAGCACAAAACAGCTCATTGACAAAGATGGATGGTTGCATACTGGTGATATTGGCACTTGGACGAAAGAAGGTTCTTTAAAAATTGTCGACAGGTGTAAAAACATATTTAAACTCTCACAAGGCGAATATATTGCACCAGAAAGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD123186             [                                                                                                                                                                                                                TTACGTTTTACACGGGGAGTTTTTGGCTGTCCAGTAATAGTTGGCTATGGTTTTAGTGAATCATGTGGCGTTATTAGTCTTACACTGTTTGGCGATAAAAGCCTGGGTCATGTCGGTGCTCTTATTCCAGGAATTTCAGCCAAACTGGTAGATGTACCGTATATGGGTATCAGCGTTGAGAAAATGAAAATGGGTGAAGTATGTGTCAAAGGCCTAAATTGTACTCAGGGGTATTACAGTGATGAAGAAAGCACAAAACAGCTCATTGACAAAGATGGATGGTTGCATACTGGTGATATTGGCACTTGGACGAAAGAAGGTTCTTTAAAAATTGTCGACAGGTGTAAAAACATATTTAAACTCTCACAAGGCGAATATATTGCACCAGAAAGATTGGAAAATATCTATCAACTCAGTCCACTAGTTGAACAAATCTCTGTTGATGGCAATTCATTTTACGATTTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD083565             [                                                                                                                                                                                                                                                                                                                                                                                                          AAAATGGGTGAAGTATGTGTCAAAGG CTAAATTGTACTCAGGCGTATTACAGTGATGAAGAAAGCACAAAACAGCTCATTGACAAAGATGGATGGTTGCATACTGGTGATATTGGCACTTGGACGAAAGAAGGTTCTTTAAAAATTGTCGACAGGTGTAAAAACATATTTAAACTCTCACAAGGCGAATATATTGCACCAGAAAGATTGGAAAATATCTATCAACTCAGTCCACTAGTTGAACAAATCTTTGTTGATGGCAATTCATTTTACGATTTTCCAATAGCTGTAGTTGTACCAAATATCAAAGAGTTGACTAAGCGCATACTGTCTAAGGCGAATTTCAATGACTCATTGTTATTGAACGGTAATAAAGGAGAGGCTGAGGCTTCCAAATACAAATTGAATGATTCTAATCCAATAGTCGATACTCCAACGTTATGTTCACAGCCCGCAGCACGTAAAATTGTCGTTTCAGAATTAGAAAA TTAGGAAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL SMAA17936            [                                                                                                                                                                                                                                                                                                                                                                                                                 GTGAAGTATGTGTCAAAGGCCTAAATTGTACTCAGGGGTATTACAGTGATGAAGAAAGCACAAAACAGCTCATTGACAAAGATGGATGGTTGCATACTGGTGATATTGGCACTTGGACGAAAGAAGGTTCTTTAAAAATTGTCGACAGGTGT AAAACATATTTAAACTCTCACAAGGCGAATATATTGCACCAGAAAGATTGGAAAATATCTATCAACTCAGTCCACTAGTTGAACAAATCTTTGTTGATGGCAATTCATTTTACGATTTcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD079253             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTTGTACCAAATATCAAAGAGTTGACTAAGCGCATACTGTCTAAGGCGAATTTCAATGACTCATTGTTATTGAACGGTAATAAAGGAGAGGCTGAGGCTTCCAAATACAAATTGAATGATTCTAATCCAATAGTCGATACTCCAACGTTATGTTCACAGCCCGCAGCACGTAAAATTGTTGTTTCAGAATTAGAAAATTTAGGAAGGAAAAGAGGACTAAAGGGATTTGAGATAGTAAGATTTTTGCAACAGTTTTTTTTAATGAGATTTTGGTCTTGTGTTTCTAAGCAGTTTCAGTAATAGTCTTATATATCTTGTCCTCGGACTACTTTTTCCATTAATCTGTGATTCTAAGATCTTTTGTTCTCAGTTCCTGAACTAAAATCAAGGCACGGATTATGGTAGCTGTTTTTTGAGGATGAGACTATTCTCGAAAAACCTTCAAATTCAAAATGTTTGGAGAAAAGATGTTAAAGTCGATATTTTATGTGGTAATCTTTCATTCAGATTCANATTAAACGTGTTTACCTTTCTTCGATTCCATTCACTGTGGAAAATGGTTTAGTCACATCCAATTTCANACTAGCGAGAACTCGACTACGGGAAACCTTCTCAGATAGATTACGTTTGTTGTACGAAGAAGCCAGCGCATAATATCATATTACTGTTTTATTNCTATTNNGAATCTGAATACATAATGTGATGCATAGATACATAAATATCNTCTTTAAAAAGTCACATNCTTNCCACTACATTNTATAGNTACTTCTATATAANTCATTA]


>consensus_10036#0 CGAAACTTGCAATGGAGAAGGTTTCATCTGTTCCTTTCTACTTAGCATATTCAACTATGC AGTTGAATCTAAAGTTGCAGAACAAGAAAAAAATATATACGACAATTCAAGTATTTGGGA TTTTATATTCTTCAATAAAATTAGACAAACTTTGGGTGGTCGTGTCAAAGTAATAGTTTC TGGTAGTGCACCCGTTGCAAATGAAATTTTACGTTTTACACGGGGAGTTTTTGGCTGTCC AGTAATAGTTGGCTATGGTTTTAGTGAATCATGTGGCGTTATTAGTCTTACACTGTTTGG CGATAAAAGCCTGGGTCATGTCGGTGCTCTTATTCCAGGAATTTCAGCCAAACTGGTAGA TGTACCGTATATGGGTATCAGCGTTGAGAAAATGAAAATGGGTGAAGTATGTGTCAAAGG CCTAAATTGTACTCAGGGGTATTACAGTGATGAAGAAAGCACAAAACAGCTCATTGACAA AGATGGATGGTTGCATACTGGTGATATTGGCACTTGGACGAAAGAAGGTTCTTTAAAAAT TGTCGACAGGTGTAAAAACATATTTAAACTCTCACAAGGCGAATATATTGCACCAGAAAG ATTGGAAAATATCTATCAACTCAGTCCACTAGTTGAACAAATCTTTGTTGATGGCAATTC ATTTTACGATTTTCCAATAGCTGTAGTTGTACCAAATATCAAAGAGTTGACTAAGCGCAT ACTGTCTAAGGCGAATTTCAATGACTCATTGTTATTGAACGGTAATAAAGGAGAGGCTGA GGCTTCCAAATACAAATTGAATGATTCTAATCCAATAGTCGATACTCCAACGTTATGTTC ACAGCCCGCAGCACGTAAAATTGTCGTTTCAGAATTAGAAAATTAGGAAGGAAAAGAGGA CTAAAGGGATTTGAGATAGTAAGATTTTTGCAACAGTTTTTTTTAATGAGATTTTGGTCT TGTGTTTCTAAGCAGTTTCAGTAATAGTCTTATATATCTTGTCCTCGGACTACTTTTTCC ATTAATCTGTGATTCTAAGATCTTTTGTTCTCAGTTCCTGAACTAAAATCAAGGCACGGA TTATGGTAGCTGTTTTTTGAGGATGAGACTATTCTCGAAAAACCTTCAAATTCAAAATGT TTGGAGAAAAGATGTTAAAGTCGATATTTTATGTGGTAATCTTTCATTCAGATTCANATT AAACGTGTTTACCTTTCTTCGATTCCATTCACTGTGGAAAATGGTTTAGTCACATCCAAT TTCANACTAGCGAGAACTCGACTACGGGAAACCTTCTCAGATAGATTACGTTTGTTGTAC GAAGAAGCCAGCGCATAATATCATATTACTGTTTTATTNCTATTNNGAATCTGAATACAT AATGTGATGCATAGATACATAAATATCNTCTTTAAAAAGTCACATNCTTNCCACTACATT NTATAGNTACTTCTATATAANTCATTA



consensusID : consensus_10036#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 675
fasta sequence
                              [ATTCATTTTACGATTTTCCAATAGCTGTAGTTGTACCAAATATCAAAGAGTTGACTAAGCGCATACTGTCTAAGGCGAATTTCAATGACTCATTGTTATTGAACGGTAATAAAGGAGAGGCTGAGGCTTCCAAATACAAATTGAATGATTCTAATCCAATAGTCGATACTCCAACGTTATGTTCACAGCCCGCAGCACGTAAAATTGTTGTTTCAGAATTAGAAAATTTAGGAAGGAAAAGAGGACTAAAGGGATTTGAGATAATTAAACGTGTTTACCTTTCTTCGATTCCATTCACTGTGGAAAATGGTTTAGTCACATCCAATTTCAAACTAGCGAGAACTCGACTACGGGAAACCTTCTCAGATAGATTACGTTTGTTGTACGAAGAAGCCAGCGCATAATATCATATTACTGTTTTATTTCTATTGAAATCTGAAATACATAATGTGATGCATAGATACATAAATATCTCTTTAAAAAGTCCACATCCTTCCCACTAACATTTTATAGTTACTTCTATATAAATCATTATGAATTAACCACTTAAAGTTTTCTTACCTCTTTTATCCCTAATCCTGTAGCCAATCCAGTGAATATCATGCACTCATGGATTTTTGTTTAAATGAGATCAATGTTTTTCTGATACCAATATTTTGTGTCGAATATGTTTCA]

[-] EMBL CD076006             [ATTCATTTTACGATTTTCCAATAGCTGTAGTTGTACCAAATATCAAAGAGTTGACTAAGCGCATACTGTCTAAGGCGAATTTCAATGACTCATTGTTATTGAACGGTAATAAAGGAGAGGCTGAGGCTTCCAAATACAAATTGAATGATTCTAATCCAATAGTCGATACTCCAACGTTATGTTCACAGCCCGCAGCACGTAAAATTGTTGTTTCAGAATTAGAAAATTTAGGAAGGAAAAGAGGACTAAAGGGATTTGAGATAATTAAACGTGTTTACCTTTCTTCGATTCCATTCACTGTGGAAAATGGTTTAGTCACATCCAATTTCAAACTAGCGAGAACTCGACTACGGGAAACCTTCTCAGATAGATTACGTTTGTTGTACGAAGAAGCCAGCGCATAATATCATATTACTGTTTTATTTCTATTGAAATCTGAAATACATAATGTGATGCATAGATACATAAATATCTCTTTAAAAAGTCCACATCCTTCCCACTAACATTTTATAGTTACTTCTATATAAATCATTAT                                                                                                                                            ]
[+] EMBL CD130274             [                                                                   GTCTAAGGCGAATTTCAATGACTCATTGTTATTGAACGGTAATAAAGGAGAGGCTGAGGCTTCCAAATACAAATTGAATGATTCTAATCCAATAGTCGATACTCCAACGTTATGTTCACAGCCCGCAGCACGTAAAATTGTTGTTTCAGAATTAGAAAATTTAGGAAGGAAAAGAGGACTAAAGGGATTTGAGATAATTAAACGTGTTTACCTTTCTTCGATTCCATTCACTGT                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL SMAA69911            [                                                                                                                                               ttaagagCTAA CCAAAAG CGAT C CCCACG TATGTT ACAGCCC CAGGCCGTAAAATTGGTG TTCAGAATTAGAAAATTTAGGAAGGAAAAGAGGGCTAAAGGGATTTGAGATAATTAAACGTGTTTACCTTTCTTCGA TCCATTCACTGTGGAAAATGGTTTAGTCACATCCAATTTCAAACTAGCGAGAACTCGACTACGGGAAACCTTCTCAGATAGATTACGTTTGTTGTACGAAGAAGCCAGCGCATAATATCATATTACTGTTTTATTTCTATTGAAATCTGAAATACATAATGTGATGCATAGATACATAAATATCTCTTTAAAAAGTCCACATCCTTCCCACTAACATTTTATAGTTACTNCTATATAAATCATTATGAATTAACCACTTAAAGTTTTCTTACCTCTTTTATCCCTAATCCTGTAGCCAATCCAGTGAATATCATGCACTCATGGATTTTTGTTTAAATGAGATCAATGTTTTTCTGATACCAATATTTTGTGTCGAATATGTTTCA]


>consensus_10036#1 ATTCATTTTACGATTTTCCAATAGCTGTAGTTGTACCAAATATCAAAGAGTTGACTAAGC GCATACTGTCTAAGGCGAATTTCAATGACTCATTGTTATTGAACGGTAATAAAGGAGAGG CTGAGGCTTCCAAATACAAATTGAATGATTCTAATCCAATAGTCGATACTCCAACGTTAT GTTCACAGCCCGCAGCACGTAAAATTGTTGTTTCAGAATTAGAAAATTTAGGAAGGAAAA GAGGACTAAAGGGATTTGAGATAATTAAACGTGTTTACCTTTCTTCGATTCCATTCACTG TGGAAAATGGTTTAGTCACATCCAATTTCAAACTAGCGAGAACTCGACTACGGGAAACCT TCTCAGATAGATTACGTTTGTTGTACGAAGAAGCCAGCGCATAATATCATATTACTGTTT TATTTCTATTGAAATCTGAAATACATAATGTGATGCATAGATACATAAATATCTCTTTAA AAAGTCCACATCCTTCCCACTAACATTTTATAGTTACTTCTATATAAATCATTATGAATT AACCACTTAAAGTTTTCTTACCTCTTTTATCCCTAATCCTGTAGCCAATCCAGTGAATAT CATGCACTCATGGATTTTTGTTTAAATGAGATCAATGTTTTTCTGATACCAATATTTTGT GTCGAATATGTTTCA



consensusID : consensus_10036#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 592
fasta sequence
                              [ACGATGGAGAATGCTGATAAGTGGTCTATTCCCCTCCATGAGGCGTATTTGTTGTAAATCAGTTCTGGTATAGTTTTGCGCGTTTCCAAATTGTTTGTAAAGTTTTTTACCGAACCATTTATACATTTTTATAATCGCACTTAGTATTTGATATAATTGACTTGGAGCATCTAACCTATTGGTTCTCGGCGTAGCTAGATAATTTTCTATTTAGGTTACACATAGAGTCATTCAATGTTTGACTCTACGCATTTGATTAAATGAAATCCTTTATATTCACTCTTTCAGATCAAACGTGTTTACCTTTCTTCGATTCCATTCACTGTGGAAAATGGTTTAGTCACATCCAATTTCAAACTATCGAGAACTCGACTACGGGAAACCTTCTCAGATAGATTACGTTTGTTGTACGAAGAAGCCAGCGCATAATATCATATTACTGTTTTATTTCTATTGAAATCTGAAATACATAATGTGATGCATAGATACATAAATATCTCTTTAAAAAGTCCACATCCTTCCCACTAACATTTTATAGTTACTTCTATATAAATCATTATGAATTAACCACTTAAAGTTTTCTTACCTCTTT]

[+] EMBL CD067100             [ACGATGGAGAATGCTGATAAGTGGTCTATTCCCCTCCATGAGGCGTATTTGTTGTAAATCAGTTCTGGTATAGTTTTGCGCGTTTCCAAATTGTTTGTAAAGTTTTTTACCGAACCATTTATACATTTTTATAATCGCACTTAGTATTTGATATAATTGACTTGGAGCATCTAACCTATTGGTTCTCGGCGTAACTAGATAATTTTCTATTTAGGTTACACATAGAGTCATTCAATGTTTGACTCTACGCATTTGATTAAATGAAATCCTTTATATTCACTCTTTCAGATCAAACGTGTTTACCTTTCTTCGATTCCATTCACTGTGGAAAATGGTTTAGTCACATCCAATTTCAAACTATCGAGAACTCGACTACGGGA                                                                                                                                                                                                                    ]
[+] EMBL CD066838             [   ATGGAGAATGCTGATAAGTAGTCTATTCCCCTCCATGAGGCGTATTTGTTGTAAATCAGTTTTGGTATAGTTTTGCGTGTTTCCAAATTGTTTGTAAAGTTTTTTACCGAACCATTTATACATTTTTATAATCGCACTTAGTATTTGATATAATTGACTTGGAGCATCTAACCTATTGGTTCTCGGCGTAGCTAGATAATTTTCTATTTAGGTTACACATAGAGTCATTCAATGTTTG                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD066908             [                                                                                                                                            TTAGTATTTGATGTAATTGACTTGGAGCATCTAACCTATTGGTTCTCGGCGTAGCTAGATAATTTTCTATNTAGGTTACACATAGAGTCATTCAATGTTTGACTCTACGCATTTGATTAAATGAAATCCTTTATATTCACTCTTTCAGATTAAACGTGTTTACCTTTCTTCGATTCCATTCACTGTGGAAAATGGTTTAGTCACATCCAATTTCAAACTAGCGAGAACTCGACTACGGGAAACCTTCTCAGATAGATTACGTTTGTTGTACGAAGAAGCCAGCGCATAATATCATATTACTGTTTTATTTCTATTGAAATCTGAAATACATAATGTGATGCATAGATACATAAATATCTCTTTAAAAAGTCCACATCCTTCCCACTAACATTTTATAGTTACTTCTATATAAATCATTATGAATTAACCACTTAAAGTTTTCTTACCTCTTT]


>consensus_10036#2 ACGATGGAGAATGCTGATAAGTGGTCTATTCCCCTCCATGAGGCGTATTTGTTGTAAATC AGTTCTGGTATAGTTTTGCGCGTTTCCAAATTGTTTGTAAAGTTTTTTACCGAACCATTT ATACATTTTTATAATCGCACTTAGTATTTGATATAATTGACTTGGAGCATCTAACCTATT GGTTCTCGGCGTAGCTAGATAATTTTCTATTTAGGTTACACATAGAGTCATTCAATGTTT GACTCTACGCATTTGATTAAATGAAATCCTTTATATTCACTCTTTCAGATCAAACGTGTT TACCTTTCTTCGATTCCATTCACTGTGGAAAATGGTTTAGTCACATCCAATTTCAAACTA TCGAGAACTCGACTACGGGAAACCTTCTCAGATAGATTACGTTTGTTGTACGAAGAAGCC AGCGCATAATATCATATTACTGTTTTATTTCTATTGAAATCTGAAATACATAATGTGATG CATAGATACATAAATATCTCTTTAAAAAGTCCACATCCTTCCCACTAACATTTTATAGTT ACTTCTATATAAATCATTATGAATTAACCACTTAAAGTTTTCTTACCTCTTT



consensusID : consensus_10036#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 355
fasta sequence
                              [ACAAACACTCCCAGACTTCAGGATAGCTGGCTCAGTTCTGCCACTAGCTACGAGCAATCACGTTGTATGCTCGTCAGATATCTTCGACATTGGCCCATACAAGTTACTTTGACTTTCAATAAACGCATTTCGATTAAATCTAACATTTCACAGTCAGCACGCACAGAAATATCGATTACTACCAAACAAGATAATAAATGTTGATATGTACAATATACGACGATGTGCCGGCTACATTTGGAATAGAATCCTACTTTTCTTGTTCTGCAACTTTAGATTCAACTGCATAATTGAATATGCTAAGTAGTAAAGGAACAGATGAAACCTTCTCCATTGCAACTGAATACAATCGAGA]

[+] EMBL CD156211             [ACAAACACTCCCAGACTTCAGGATAGCTGGCTCAGTTCTGCCACTAGCTACGAGCAATCACGTTGTATGCTCGTCAGATATCTTCGACATTGGCCCATACAAGTTACTTTGACTTTCAATAAACGCATTTCGATTAAATCTAACATTTCACAGTCAGCACGCACAGAAATATCGATTACTACCAAACAAGATAATAAATGTTGATATGTACAATATACGACGATGTGCCGGCTACATTTGGAATAGAATCCTACTTTTCTTGTTCTGCAACTTTAGATTCAACTGCATAATTGAATATGCTAAGTAGTAAAGGAACAGATGAAACCTTCTCCATTGCAACTGAATACAATCGAGA]
[+] EMBL CD156223             [ACAAACACTCCCAGACTTCAGGATAGCTGGCTCAGTTCTGCCACTAGCTACGAGCAATCACGTTGTATGCTCGTCAGATATCTTCGACATTGGCCCATACAAGTTACTTTGACTTTCAATAAACGCATTTCGATTAAATCTAACATTTCACAGTCAGCACGCACAGAAATATCGATTACTACCAAACAAGATAATAAATGTTGATATGTACAATATACGACGATGTGCCGGCTACATTTGGAATAGAATCCTACTTTTCTTGTTCTGCAACTTTAGATTCAACTGCATAATTGAATATGCTAAGTAGTAAAGGAACAGATGAAACCTTCTCCATTGCAACTGAATACAATCGAGA]


>consensus_10036#3 ACAAACACTCCCAGACTTCAGGATAGCTGGCTCAGTTCTGCCACTAGCTACGAGCAATCA CGTTGTATGCTCGTCAGATATCTTCGACATTGGCCCATACAAGTTACTTTGACTTTCAAT AAACGCATTTCGATTAAATCTAACATTTCACAGTCAGCACGCACAGAAATATCGATTACT ACCAAACAAGATAATAAATGTTGATATGTACAATATACGACGATGTGCCGGCTACATTTG GAATAGAATCCTACTTTTCTTGTTCTGCAACTTTAGATTCAACTGCATAATTGAATATGC TAAGTAGTAAAGGAACAGATGAAACCTTCTCCATTGCAACTGAATACAATCGAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10036#0      CGAAACTTGCAATGGAGAAGGTTTCATCTGTTCCTTTCTACTTAGCATATTCAACTATGC 60
consensus_10036#1      ------------------------------------------------------------
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      AGTTGAATCTAAAGTTGCAGAACAAGAAAAAAATATATACGACAATTCAAGTATTTGGGA 120
consensus_10036#1      ------------------------------------------------------------
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      TTTTATATTCTTCAATAAAATTAGACAAACTTTGGGTGGTCGTGTCAAAGTAATAGTTTC 180
consensus_10036#1      ------------------------------------------------------------
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      TGGTAGTGCACCCGTTGCAAATGAAATTTTACGTTTTACACGGGGAGTTTTTGGCTGTCC 240
consensus_10036#1      ------------------------------------------------------------
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      AGTAATAGTTGGCTATGGTTTTAGTGAATCATGTGGCGTTATTAGTCTTACACTGTTTGG 300
consensus_10036#1      ------------------------------------------------------------
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      CGATAAAAGCCTGGGTCATGTCGGTGCTCTTATTCCAGGAATTTCAGCCAAACTGGTAGA 360
consensus_10036#1      ------------------------------------------------------------
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      TGTACCGTATATGGGTATCAGCGTTGAGAAAATGAAAATGGGTGAAGTATGTGTCAAAGG 420
consensus_10036#1      ------------------------------------------------------------
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      CCTAAATTGTACTCAGGGGTATTACAGTGATGAAGAAAGCACAAAACAGCTCATTGACAA 480
consensus_10036#1      ------------------------------------------------------------
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      AGATGGATGGTTGCATACTGGTGATATTGGCACTTGGACGAAAGAAGGTTCTTTAAAAAT 540
consensus_10036#1      ------------------------------------------------------------
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      TGTCGACAGGTGTAAAAACATATTTAAACTCTCACAAGGCGAATATATTGCACCAGAAAG 600
consensus_10036#1      ------------------------------------------------------------
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      ATTGGAAAATATCTATCAACTCAGTCCACTAGTTGAACAAATCTTTGTTGATGGCAATTC 660
consensus_10036#1      --------------------------------------------------------ATTC 4
consensus_10036#2      ----------------------------------------ACGATGGAGAATGCTGATAA 20
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      AT--TTTACGATTTTCCAATAGCTGTAGTTGTACCAAAT-------ATCAAAGAGTTGAC 711
consensus_10036#1      AT--TTTACGATTTTCCAATAGCTGTAGTTGTACCAAAT-------ATCAAAGAGTTGAC 55
consensus_10036#2      GTGGTCTATTCCCCTCCATGAGGCGTATTTGTTGTAAATCAGTTCTGGTATAGTTTTGCG 80
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      TAAGCGCATACTGTCTAAGGCGAATTTCAATGACTCATTGTTATTGAACGGTAATAAAGG 771
consensus_10036#1      TAAGCGCATACTGTCTAAGGCGAATTTCAATGACTCATTGTTATTGAACGGTAATAAAGG 115
consensus_10036#2      CGTTTCCAAATTGTTTGTAAAGTTTTTTACCGAACCATT-----TATACATTTTTATAAT 135
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      AGAGGCTGAGGCTTCCAAATACAAATTGAATGATTCTAATCCAATAGT---CGATACTCC 828
consensus_10036#1      AGAGGCTGAGGCTTCCAAATACAAATTGAATGATTCTAATCCAATAGT---CGATACTCC 172
consensus_10036#2      CGCACTTAGTATTTGATATAATTGACTTGGAGCATCTAACCTATTGGTTCTCGGCGTAGC 195
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      AACGTTATGTTCACAGCCCGCAGCACGTAAAATTGTC--GTTTCAGAATTAGAAAATT-A 885
consensus_10036#1      AACGTTATGTTCACAGCCCGCAGCACGTAAAATTGTT--GTTTCAGAATTAGAAAATTTA 230
consensus_10036#2      TAGATAATTTTCTATTTAGGTTACACATAGAGTCATTCAATGTTTGACTCTACGCATTTG 255
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      GGAAGGAAAAGAGGACTAAAGGGATTTGAGATAGTAAGATTTTTGCAACAGTTTTTTTTA 945
consensus_10036#1      GGAAGGAAAAGAGGACTAAAGGGATTTGAGATAATTAAACGTGTTTACC---TTTCTTCG 287
consensus_10036#2      ATTAAATGAAATCCTTTATATTCACTCTTTCAGATCAAACGTGTTTACC---TTTCTTCG 312
consensus_10036#3      --------ACAAACACTCCCAGACTTCAGGATAGCTGGCTCAGTTCTGCCACTAGCTACG 52
                               *       *        *                 *    *   *   *   

consensus_10036#0      ATGAGATTTTGGTCTTGTGTTTCTAAGCAGTTTCAGTAATAGTCTTATATATCTTGTCCT 1005
consensus_10036#1      ATTCCATTCA----CTGTGG----AAAATGGTTTAGTCACATCC---AATTTCAAACTAG 336
consensus_10036#2      ATTCCATTCA----CTGTGG----AAAATGGTTTAGTCACATCC---AATTTCAAACTAT 361
consensus_10036#3      A--GCAATCACGTTGTATGCTCGTCAGATATCTTCGACATTGGC---CCATACAAGTTAC 107
                       *    * *       * **      *      *  *  *    *        *       

consensus_10036#0      CGGACTACTTTTTCCATTAATCTGTGATTCTAAGATCTTTTGTTCTCAGTTCCTGAACTA 1065
consensus_10036#1      CGAGAACTCGACTACGGGAAACC----TTCTCAGATAGATTACGTTTGTTGTACGAA--G 390
consensus_10036#2      CGAGAACTCGACTACGGGAAACC----TTCTCAGATAGATTACGTTTGTTGTACGAA--G 415
consensus_10036#3      TTTGACTTT-----CAATAAACG--------CATTTCGATTAAATCTAACATTTCAC--- 151
                                     *   ** *          *  *   **              *    

consensus_10036#0      AAATCAAGGCACGG-ATTATGGTAGCTGTTTTTTGAGGATGAGACTATTCTCGAAAAACC 1124
consensus_10036#1      AAGCCAGCGCATAATATCATATTA-CTGTTTT-----------ATTTCTATTGAAA---T 435
consensus_10036#2      AAGCCAGCGCATAATATCATATTA-CTGTTTT-----------ATTTCTATTGAAA---T 460
consensus_10036#3      -AGTCAGCACGCACAGAAATATCGATTACTACCAAACAAGATAATAAATGTTGATA---T 207
                        *  **   *        **      *  *             *    * * ** *    

consensus_10036#0      TTCAAATTCAAAATGTTTGGAGAAAAGATGTT-AAAGTCGATATTTTATGTGGTAATCTT 1183
consensus_10036#1      CTGAAATACATAATGTGATGCATAGATACATA-AATATCTCTTTAAAAAGTCCACATCCT 494
consensus_10036#2      CTGAAATACATAATGTGATGCATAGATACATA-AATATCTCTTTAAAAAGTCCACATCCT 519
consensus_10036#3      GTACAATATACGACGATGTGC-CGGCTACATTTGGAATAGAATCCTACTTTTCTTGTTCT 266
                        *  ***  *  * *    *       *  *      *            *     *  *

consensus_10036#0      TCATTCAGATTCANATTAAA-CGTGTTTACCTTTCTTCGATTCCATTCACTGTGGAAAAT 1242
consensus_10036#1      TCCCACTAACATTTTATAGT-TACTTCTATATAAATCATTATGAATTAACCACTTAAAGT 553
consensus_10036#2      TCCCACTAACATTTTATAGT-TACTTCTATATAAATCATTATGAATTAACCACTTAAAGT 578
consensus_10036#3      GCAACTTTAGATTCAACTGCATAATTGAATATGCTAAGTAGTAAAGGAACAGATGAAACC 326
                        *      *                *  *  *         *  *   **     ***  

consensus_10036#0      GGTTTAGTCACATCCAATTTCANACTAGCGAGAACTCGACTACGGGAAACCTTCTCAGAT 1302
consensus_10036#1      TTTCTTACCTCTTTTATCCCTAATCCTGTAGCCAATCCA--GTGAATATCATGCACTCAT 611
consensus_10036#2      TTTCTTACCTCTTT---------------------------------------------- 592
consensus_10036#3      TTCTCCATTGCAACTGAATACAATCGAGA------------------------------- 355
                                 *                                                 

consensus_10036#0      AGATTACGTTTGTTGTACGAAGAAGCCAGCGCATAATATCATATTACTGTTTTATTNCTA 1362
consensus_10036#1      GGATT---TTTGTTTAA--ATGAGATCAATGTTTT-TCTGATACCAATATTTTGTGTCGA 665
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      TTNNGAATCTGAATACATAATGTGATGCATAGATACATAAATATCNTCTTTAAAAAGTCA 1422
consensus_10036#1      ATATGTTTCA-------------------------------------------------- 675
consensus_10036#2      ------------------------------------------------------------
consensus_10036#3      ------------------------------------------------------------
                                                                                   

consensus_10036#0      CATNCTTNCCACTACATTNTATAGNTACTTCTATATAANTCATTA 1467
consensus_10036#1      ---------------------------------------------
consensus_10036#2      ---------------------------------------------
consensus_10036#3      ---------------------------------------------
                                                                    




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)