cluster # 10052

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Schistosoma mansoni
cluster # 10052 cluster # 10052 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10052#0 length = 872 sequences # 2
consensus_10052#1 length = 599 sequences # 9

consensus_10052#2 length = 402 sequences # 1
consensus_10052#3 length = 163 sequences # 1

consensusID : consensus_10052#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 872
fasta sequence

                              [TTAGTATTGAGTGGTTCTGTCTAACTCGGTGTAGCTACTGAATGGGGATGTGTTCATGTCGGTTGTAGTCGGTCCGTCGTGGGTGCACAGACCGAGCCACACAAATCTCTACTCGACGGTGCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCGACTGCAGCTTTCGTGAAGAGACCGAATGTGAATGCTGAAGTGCAGGTGGATAGGGTGAGCACACCGGTTGTCAGTCTGACCACACACAAGTTAGAACGGGAAGTGGTCGAGAGGAGTCTGTGTACCAGCTGTGGACATCGGTACGTGAATACCGAAGAGATGGCTTGTCAAACCGTTCAGCCTAAGATCGAACCGGGTCCTGTGACTGTGAAAACGTCGAATGTCGCTATGCAGACCAGCAAGTTCTCAAGTCTGTGTCAGACAACCAGTGAACTAGTGGAAGCACACAGTTCGTGAAACGTTCCACTGTCGACCAACAATCGACACAGTACCAGTCTTCTCGTNCGACGTGGGTGCACAGACCGAGCACACAAATCTCTACTCGACGGGTGCTGCCCATTTTGTCGTTGAACGCACCGATGCGACGTCACAAGCCAAACCTGGCCAATTGGGCATGGGGGATCCTCGGAGGGAAAACATGCACCAATTGTTTCAGTCCAGCAGGCCCCGAAACCATCCAA]

[-] EMBL CD090191             [TTAGTATTGAGTGGTTCTGTCTAACTCGGTGTAGCTACTGAATGGGGATGTGTTCATGTCGGTTGTAGTCGGTCCGTCGTGGGTGCACAGACCGAGCCACACAAATCTCTACTCGACGGTGCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCGACTGCAGCTTTCGTGAAGAGACCGAATGTGAATGCTGAAGTGCAGGTGGATAGGGTGAGCACACCGGTTGTCAGTCTGACCACACACAAGTTAGAACGGGAAGTGGTCGAGAGGAGTCTGTGTACCAGCTGTGGACATCGGTACGTGAATACCGAAGAGATGGCTTGTCAAACCGTTCAGCCTAAGATCGAACCGGGTCCTGTGACTGTG                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD193190             [                                                                                                   CACAAATCTCTACTCGACGGTGCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCATTGAAGTCGCCCGAAAGTGTGCTTGATTCGACTGCAGCTTTCGTGAAGAGACCGAATGTGAATGCTGAAGTGCAAGTGGATAGGGTGAGCACACCGGTTGTCAGTCTGACCACACACAAGTTAGAACGGGAAGTGGTCGAGAGGAGTCTGTGTACCAGCTGTGGACATCGGTACGTGAATACCGAAGAGATGGCTTGTCAAACCGTCCAGCCTAAGATCGAACCGGTTCCTGTGACTGTGAAAACGTCGAATGTCGCTATGCAGACCAGCAAGTTCTCAAGTCTGTGTCAGACAACCAGTGAACTAGTGGAAGCACACAGTTCGTGAAACGTTCCACTGTCGACCAACAATCGACACAGTACCAGTCTTCTCGTNCGACGTGGGTGCACAGACCGAGCACACAAATCTCTACTCGACGGGTGCTGCCCATTTTGTCGTTGAACGCACCGATGCGACGTCACAAGCCAAACCTGGCCAATTGGGCATGGGGGATCCTCGGAGGGAAAACATGCACCAATTGTTTCAGTCCAGCAGGCCCCGAAACCATCCAA]




>consensus_10052#0
TTAGTATTGAGTGGTTCTGTCTAACTCGGTGTAGCTACTGAATGGGGATGTGTTCATGTC
GGTTGTAGTCGGTCCGTCGTGGGTGCACAGACCGAGCCACACAAATCTCTACTCGACGGT
GCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTG
TGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCG
AAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTG
GATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCGACTGCAGCT
TTCGTGAAGAGACCGAATGTGAATGCTGAAGTGCAGGTGGATAGGGTGAGCACACCGGTT
GTCAGTCTGACCACACACAAGTTAGAACGGGAAGTGGTCGAGAGGAGTCTGTGTACCAGC
TGTGGACATCGGTACGTGAATACCGAAGAGATGGCTTGTCAAACCGTTCAGCCTAAGATC
GAACCGGGTCCTGTGACTGTGAAAACGTCGAATGTCGCTATGCAGACCAGCAAGTTCTCA
AGTCTGTGTCAGACAACCAGTGAACTAGTGGAAGCACACAGTTCGTGAAACGTTCCACTG
TCGACCAACAATCGACACAGTACCAGTCTTCTCGTNCGACGTGGGTGCACAGACCGAGCA
CACAAATCTCTACTCGACGGGTGCTGCCCATTTTGTCGTTGAACGCACCGATGCGACGTC
ACAAGCCAAACCTGGCCAATTGGGCATGGGGGATCCTCGGAGGGAAAACATGCACCAATT
GTTTCAGTCCAGCAGGCCCCGAAACCATCCAA

consensusID : consensus_10052#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 599
fasta sequence

                              [TTCGTGAAACGTTCCACTGTCGACCAACAAATCGACACAGTACCAGTCTCCTCGTCCGACGTGGGTGCACAGACCGAGCCACACAAATCTCTACTCGACGGTGCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAGGGATAATGTGCATTTCATTCCCTCTTATTTAGTTGATTCATGTGTTTGTGCTATACCTTCTTTCGTTGATTGTTGGTGTCAATGTAGTTTGTCTTCTTCATCAACATCTCAGCTTGTTGATGATTGTGTTTATGTTTCTGGTGATGATTCTTTGTTGTGCCCTCTTGTTGATTCTTGTTGTAAAATGTTCGTTGGTTGCTCGTCCTTTGGAACTTCGACCGAGCCATTAAAGCCTGTTTTCCA]

[+] EMBL CD061906             [TTCGTGAAACGTTCCACTGTCGACCAACAAATCGACACAGTACCAGTCTCCTCGTCCGACGTGGGTGCACAGACCGAGCCACACAAATCTCTACTCGACGGTGCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCATCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAGGGATAATGTGCATTTCATTCCCTC                                                                                                                                                                                                                           ]
[-] EMBL CD196448             [                                                 CCTCGTCCGACGTGGGGGCACAGACCGAGCCACACAAATCTCTACTCGACGGTGCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACGTGTCCAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAGGGATAATGTGCATTTCATTCCCTCTTATTTAGTTGATTCATGTGTTTGTGCTATACCTTCTTTCGTTGATTGTTGGTGTCAATGTAGTTTGTCTTCTTCATCAACATCTCAGCTTGCTGATGATTGTGTTTATGTTTCTGGTGATGATTCTT                                                                                           ]
[-] EMBL CD196367             [                                                         GACGTGGGTGCACAGACCGAGCCACACAAATCTCTACTCGACGGTGCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCATCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAGGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAGGGATAATGTGCATTTCATTCCCTCTTATTTAGTTGATTCATGTGTTTGTGCTATACCTTCTTTCGTTGATTGTTGGTGTCAATGTAGTTTGTCTTCTTCATCAACATCTCAGCTTGTTGATGATTGTGTTTATGTTTCTGGTGATGATTCTT                                                                                           ]
[-] EMBL CD197187             [                                                              GGGTGCACAGACCGAGCCACACAAATCTCTACTCGACGGTGCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAGGGATAATGTGCATTTCATTCCCTCTTATTTAGTTGATTCATGTGTTTGTGCTATACCTTCTTTCGTTGATTGTTGGTGTCAATGTAGTTTGTCTTCTTCATCAACATCTCAGCTTGTTGATGATTGTGTTTATGTTTCTGGTGATGATTCTT                                                                                           ]
[-] EMBL CD062405             [                                                               GGTGCACAGACCGAGCCACACAAATCTCTACTCGACGGTGCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAAAGATAATGTGCATTTCATTCCCTCTTATTTAGTTGATTCATGTGTTTGTGCTATACCTTCTTTCGTTGATTGTTGGTGTCAATGTAGTTTGTCTTCTTCATCAACATCTCAGCTTGTTGATGATTGTGTTTATGTTTCTGGTGATGATTCTTTGTTGTGCCCTCTTGTTGATTCTTGTTGTAAAATGTTCGTTGGTTGCTCGTCCTTTGGAACTTCGACCGAGCCATTAAAGCCTGTTTTCCA]
[-] EMBL CD196491             [                                                                                                               TTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCGAAACCCATCCAAACACTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAGGGATAATGTGCATTTCATTCCCTCTTATTTAGTTGATTCATGTGTTTGTGCTATACCTTCTTTCGTTGATTGTTGGTGTCAATGTAGTTTGTCTTCTTCATCAACATCTCAGCTTGTTGATGATTGTGTTTATGTTTCTGGTGATGATTCTT                                                                                           ]
[-] EMBL CD061799             [                                                                                                                                                                     ATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAGGGATAATGTGCATTTCATTCCCTCT                                                                                                                                                                                                                          ]
[-] EMBL CD187017             [                                                                                                                                                                                                                  CAGCAGCCACCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAGGGATAATGTGCATTTCATTCCCTCTTATTTAGTTGATTCATGTGTTTGTGCTATACCTTCTTTCGTTGATTGTTGGTGTCAATGTAGTTTGTCTTCTTCATCAACATCTCAGCTTGTTGATGATTGTGTTTATGTTTCTGGTGATGATTCTTTGTTGTGCCCTCTTGTTGATTCTTGTTGTAAAATGTTCGTTGGCTGCTCGTCCTTTGGAACTT                            ]
[+] EMBL CD180318             [                                                                                                                                                                                                                                ACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAGGGATAATGTGCATTTCATTCCCTCTTATTTAGTTGATTCATGTGTTTGTGCTATACCTTCTTTCGTTGATTGTTGGTGTCAATGTAGTTTGTCTTCTTCATCAACACCTCAGCTTGTTGATGATTGTGTTTATGTTTCTGGTGATGATTCTTTGTTGTGCCCTCTTGTTGATTCTTGTTGTAAAATGTT                                                      ]




>consensus_10052#1
TTCGTGAAACGTTCCACTGTCGACCAACAAATCGACACAGTACCAGTCTCCTCGTCCGAC
GTGGGTGCACAGACCGAGCCACACAAATCTCTACTCGACGGTGCTGCCCATTTGTCGTTG
AAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTGTGCATGGTGGATTCTTGG
AGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCGAAACCCATCCAAACATTG
GAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTGGATAGTGCGACCAGTGTG
TCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCTGATTATCCTTTATTGTTGAGGGAT
AATGTGCATTTCATTCCCTCTTATTTAGTTGATTCATGTGTTTGTGCTATACCTTCTTTC
GTTGATTGTTGGTGTCAATGTAGTTTGTCTTCTTCATCAACATCTCAGCTTGTTGATGAT
TGTGTTTATGTTTCTGGTGATGATTCTTTGTTGTGCCCTCTTGTTGATTCTTGTTGTAAA
ATGTTCGTTGGTTGCTCGTCCTTTGGAACTTCGACCGAGCCATTAAAGCCTGTTTTCCA

consensusID : consensus_10052#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence

                              [AGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTCTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCGACTGCAGCTTTCGTGAAGAGACCGAATGTGAATACTGAAGTGCAAGTGGATAGGGTGAGCACACCGGTTGTCAGTCTGACCACACACAAGTTAGAACGGGAAGTGGTCGAGAGGAGTCTGTGTACCAGCTGTGGACATCGGTACGTGAATACCGAAGAGATGGCTTGTCAAACCGTTCAGCCTAAGATCGAACCGGTTCCTGTGACTGTGAAAACGTCGAATGTCGCTATGCAGACCAGCAAGTTCGTGAAACGTTCCACTGTCGACCAACAAATCGACACAGTACCAGTCTCCTCGTCCGACGTGGGTGC]

[-] EMBL CD093856             [AGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTCTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCGACTGCAGCTTTCGTGAAGAGACCGAATGTGAATACTGAAGTGCAAGTGGATAGGGTGAGCACACCGGTTGTCAGTCTGACCACACACAAGTTAGAACGGGAAGTGGTCGAGAGGAGTCTGTGTACCAGCTGTGGACATCGGTACGTGAATACCGAAGAGATGGCTTGTCAAACCGTTCAGCCTAAGATCGAACCGGTTCCTGTGACTGTGAAAACGTCGAATGTCGCTATGCAGACCAGCAAGTTCGTGAAACGTTCCACTGTCGACCAACAAATCGACACAGTACCAGTCTCCTCGTCCGACGTGGGTGC]




>consensus_10052#2
AGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTCTTGTGGATAGTGCGACCAGTGTGTC
AGTGAAGTCGCCCGAAAGTGTGCTTGATTCGACTGCAGCTTTCGTGAAGAGACCGAATGT
GAATACTGAAGTGCAAGTGGATAGGGTGAGCACACCGGTTGTCAGTCTGACCACACACAA
GTTAGAACGGGAAGTGGTCGAGAGGAGTCTGTGTACCAGCTGTGGACATCGGTACGTGAA
TACCGAAGAGATGGCTTGTCAAACCGTTCAGCCTAAGATCGAACCGGTTCCTGTGACTGT
GAAAACGTCGAATGTCGCTATGCAGACCAGCAAGTTCGTGAAACGTTCCACTGTCGACCA
ACAAATCGACACAGTACCAGTCTCCTCGTCCGACGTGGGTGC

consensusID : consensus_10052#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 163
fasta sequence

                              [AATACCGAAGAGATGGGTTGTCAAACCGTTCATCCTAAGATCGAACCGGTTCCTGTGACTGTGAAAACGTCGAATGTCGCTATGCAGACCAGCAAGTTCTCAAGTCTGTGTCAGACAACCAGTGAACTAGTGAAACATGCCCATATGTCCGTGAGACACACCT]

[+] EMBL CD193040             [AATACCGAAGAGATGGGTTGTCAAACCGTTCATCCTAAGATCGAACCGGTTCCTGTGACTGTGAAAACGTCGAATGTCGCTATGCAGACCAGCAAGTTCTCAAGTCTGTGTCAGACAACCAGTGAACTAGTGAAACATGCCCATATGTCCGTGAGACACACCT]




>consensus_10052#3
AATACCGAAGAGATGGGTTGTCAAACCGTTCATCCTAAGATCGAACCGGTTCCTGTGACT
GTGAAAACGTCGAATGTCGCTATGCAGACCAGCAAGTTCTCAAGTCTGTGTCAGACAACC
AGTGAACTAGTGAAACATGCCCATATGTCCGTGAGACACACCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10052#0      TTAGTATTGAGTGGTTCTGTCTAACTCGGTGTAGCTACTGAATGGGGATGTGTTCATGTC 60
consensus_10052#3      ------------------------------------------------------------
consensus_10052#2      ------------------------------------------------------------
consensus_10052#1      ------------------------------------------------------------
                                                                                   

consensus_10052#0      GGTTGTAGTCGGTCCGTCGTGGGTGCACAGACCGAGCCACACAAATCTCTACTCGACGGT 120
consensus_10052#3      ------------------------------------------------------------
consensus_10052#2      ------------------------------------------------------------
consensus_10052#1      ------------------------------------------------------------
                                                                                   

consensus_10052#0      GCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTCCAATTG 180
consensus_10052#3      ------------------------------------------------------------
consensus_10052#2      ------------------------------------------------------------
consensus_10052#1      ------------------------------------------------------------
                                                                                   

consensus_10052#0      TGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAGCCACCG 240
consensus_10052#3      ------------------------------------------------------------
consensus_10052#2      ------------------------------------------------------------
consensus_10052#1      -----------------------TTCGTGAAACGTTCCACTGTCGACCAACAAATCGACA 37
                                                                                   

consensus_10052#0      AAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTGTTGTG 300
consensus_10052#3      ------------------------------------------------------------
consensus_10052#2      --------------------AGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGTCTTGTG 40
consensus_10052#1      CAGTACCAGTCTCCTCGTCCGACGTGGGTGCACA-GACCGAGCCACACAAATCTCTACTC 96
                                                                                   

consensus_10052#0      GATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCGACTGCAGCT 360
consensus_10052#3      ------------------------------------------------------------
consensus_10052#2      GATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCGACTGCAGCT 100
consensus_10052#1      GACGGTGCTGCCCATTTGTCGTTGAAACGCACCGATGCGACGTCACAAGCCAAACCTGTC 156
                                                                                   

consensus_10052#0      TTCGTGAAGAGACCGAATGTGAATGCTGAAGTGCAGGTG--GATAGGGTGAGCACACCGG 418
consensus_10052#3      ------------------------------------------------------------
consensus_10052#2      TTCGTGAAGAGACCGAATGTGAATACTGAAGTGCAAGTG--GATAGGGTGAGCACACCGG 158
consensus_10052#1      CAATTGTGCATGGTGGATTCTTGGAGTGAGATACATGCACCAGTTGTTCCAGTCCAGCAG 216
                                                                                   

consensus_10052#0      TTGTCAGTCTGACCACACACAAGTTAGAACGGGAAGTGGTCGAGAGGAGTCTGTGTACCA 478
consensus_10052#3      ------------------------------------------------------------
consensus_10052#2      TTGTCAGTCTGACCACACACAAGTTAGAACGGGAAGTGGTCGAGAGGAGTCTGTGTACCA 218
consensus_10052#1      CCACCGAAACCCATCCAAACATTGGAAGCCTGTGTGCAGACGGTGAAGGAAAGTGTGTGT 276
                                                                                   

consensus_10052#0      GCTGTGGACATCGGTACGTGAATACCGAAGAGATGGCTTGTCAAACCGTTCA--GCCTAA 536
consensus_10052#3      --------------------AATACCGAAGAGATGGGTTGTCAAACCGTTCA--TCCTAA 38
consensus_10052#2      GCTGTGGACATCGGTACGTGAATACCGAAGAGATGGCTTGTCAAACCGTTCA--GCCTAA 276
consensus_10052#1      GTTGTGGATAGTGCGACCAGTGTGTCAGTGAAGTCGCCCGAAAGTGTGCTTGATTCTCCT 336
                                             *  *   **  * *   *  *    * *     *    

consensus_10052#0      GATCGAACCGGGTCCT---GTGACTGTGAAAACGTCGAATGTCGCTATGCAG---ACCAG 590
consensus_10052#3      GATCGAACCGGTTCCT---GTGACTGTGAAAACGTCGAATGTCGCTATGCAG---ACCAG 92
consensus_10052#2      GATCGAACCGGTTCCT---GTGACTGTGAAAACGTCGAATGTCGCTATGCAG---ACCAG 330
consensus_10052#1      GATTATCCTTTATTGTTGAGGGATAATGTGCATTTCATTCCCTCTTATTTAGTTGATTCA 396
                       ***    *    *  *   * **   **   *  **         ***  **   *    

consensus_10052#0      CAAGTTC-TC--AAGTCTGTGTCAGACAACCAGTGA-ACTAGTGGAA---GCACACA-GT 642
consensus_10052#3      CAAGTTC-TC--AAGTCTGTGTCAGACAACCAGTGA-ACTAGTGAAACATGCCCATATGT 148
consensus_10052#2      CAAGTTCGTG--AAACGTTCCACTGTCGACCAACAA-ATCGACACAG--TACCAGTCTCC 385
consensus_10052#1      TGTGTTTGTGCTATACCTTCTTTCGTTGATTGTTGGTGTCAATGTAGTTTGTCTTCTTCA 456
                          ***  *   *    *      *   *                *              

consensus_10052#0      TCGTGAAACGTTCCACTGTCGACCAACAATCGACACAGTACCAGTCTTCTCGTNCGACGT 702
consensus_10052#3      CCGTGAGACACACCT--------------------------------------------- 163
consensus_10052#2      TCGTCCGACGTGGGTGC------------------------------------------- 402
consensus_10052#1      TCAACATCTCAGCTTGTTGATGATTGTGTTTATGTTTCTGGTGATGATTCTTTGTTGTGC 516
                        *                                                          

consensus_10052#0      GGGTGCACAGACCGAGCACACAAATCTCTACTCGACGGGTGCTGCCCATTTTGTCGTTGA 762
consensus_10052#3      ------------------------------------------------------------
consensus_10052#2      ------------------------------------------------------------
consensus_10052#1      CCTCTTGTTGATTCTTGTTGTAAAATGTTCGTTGGTTGCTCGTCCTTTGGAACTTCGACC 576
                                                                                   

consensus_10052#0      ACGCACCGATGCGACGTCACAAGCCAAACCTGGCCAATTGGGCATGGGGGATCCTCGGAG 822
consensus_10052#3      ------------------------------------------------------------
consensus_10052#2      ------------------------------------------------------------
consensus_10052#1      GAGCCATTAAAGCCTGTTTTCCA------------------------------------- 599
                                                                                   

consensus_10052#0      GGAAAACATGCACCAATTGTTTCAGTCCAGCAGGCCCCGAAACCATCCAA 872
consensus_10052#3      --------------------------------------------------
consensus_10052#2      --------------------------------------------------
consensus_10052#1      --------------------------------------------------