| These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_10074#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 826 fasta sequence 
                              [TAAATGAATACTGACACATCTGTTGAACGTCACTTTGCTGATAACTGAACATTACCTGATTAGACGTTAAATCATTAGACACATAAGAATTATGACTTGAGTAAAATGGAACAGAACTTTGCTGATTCACTGACTGATCATCTGAAGATCTATACATAGAAGTAATCTGGTTGGAAGCACTATGATCATGTGAATATTGTAGACGGGGATTTTCGAAATTACAAGTAGGAGATTGGGAATTTCGCACAAAGCTAGTACTGTGAGGATAAGATGAATGACCATGCAGAAGTTGACTGGTATTGTTTATACGAGCATTCTTATTTGACTTCAAAGGTAACGTTTGATATGATCCGACGACTGACGACATTTGAGGAGTGACTGGCATGCCATCAACGGTAATGGATGCACAGTGGAGAGTATTGGGATAACTGCCAGACAGTTGGTCACGAGAATCATGATCAGAGAATTGTTCATTGACAATTTGTTCTGTAACCTGGTTATCAAAAATACTAGGAGTTGAGTGATTTGTTCCAGAAGGCTGATTAGATGGATATGAAGATGAAGATGGAGAAGAGACTTTCAAAGGAGTTGCAGCTTCTTGCTGACCCCATGTGGAAGCATTATTAGGACCAACACTGCAACTGCTGCTACTGCTCCAACATTCATGTCCAGAGTCAGTGCTTGGTAGTGACGATGTGTTTGTTAGCTTACATCCAGTTATTCCAGTGGGAGATTTCGATTCAGAAATAGCTTCCTTGACAGTGACTAAAACAACCTCTGAAGAATCAAGACCCTTAGGTGTAGAAGATGTCAGCATGGGCATGTC]
[+] EMBL CD178577             [TAAATGAATACTGACACATCTGTTGAACGTCACTTTGCTGATAACTGAACATTACCTGATTAGACGTTAAATCATTAGACACATAAGAATTATGACTTGAGTAAAATGGAACAGAACTTTGCTGATTCACTGACTGATCATCTGAAGATCTATACATAGAAGTAATCTGGTTGGAAGCACTATGATCATGTGAATATTGTAGACGGGGATTTTCGAAATTACAAGTAGGAGATTGGGAATTTCGCACAAAGCTAGTACTGTGAGGATAAGATGAATGACCATGCAGAAGTTGACTGGTATTGTTTATACGAGCATTCTTATTTGACTTCAAAGGTAACGTTTGATATGATCCGACGACTGACGACATTTGAGGAGTGACTGGCATGCCATCAACGGTAATGGATGCACAGTGGAGAGTATTGGGATAACTGCCAGACAGTTGGTCACGAGAATCATGATCAGAGAATTGTTCATTGACAATTTGTTCTGTAACCTGGTTATCAAAAATACTAGGAGTTGAGTGA                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD167560             [                                                                                                                                                                                                                                                       AAAGCTAGTACTGTGAGGATAAGATGAATGACCATGCAGAAGTTGACTGGTATTGTTTATACGAGCATTCTTATTTGACTTCAAAGGTAACGTTTGATATGATCCGACGACTGACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD124758             [                                                                                                                                                                                                                                                                                                                                                                                   GGAGTGACTGGCATGCCATCAACGGTAATGGATGCACAGTGGAGAGTATTGGGATAACTGCCAGACAGTTGGTCACGAGAATCATGATCAGAGAATTGTTCATTGACAATTTGTTCTGTAACCTGGTTATCAAAAATACTAGGAGTTGAGTGATTTGTTCCAGAAGGCTGATTAGACGGATATGAAGATGAAGATGGAGAAGAGACTTTCAAAGGAGCTGCAGCTTCTTGCTGACCCCATGTGGAAGCATTATTAGGACCAACACTGCAACTGCTGCTACTGCTCCAACATTCATGTCCAGAGTCAGTGCTTGGTAGTGACGATGTGTTTGTTAGCTTACATCCAGTTATTCCAGTGGGAGATTTCGATTCAGAAAT                                                                              ]
[+] EMBL CD124668             [                                                                                                                                                                                                                                                                                                                                                                                   GGAGTGACTGGCATGCCATCAACGGTAATGGATGCACAGTGGAGAGTATTGGGATAACTGCCAGACAGTTGGTCACGAGAATCATGATCAGAGAATTGTTCATTGACAATTTGTTTTGTAACCTGGTTATCAAAAATACTAGGAGTTGAGTGATTTGTTCCAGAAGGCTGATTAGATGGATATGAAGATGAAGATGGAGAAGTGACTTTCAAAGGAGTTGCAGCTTCTTGCTGACCCCATGTGGAAGCATTATTAGGACCAACACTGCAACTGCTGCTACTGCTCCAACATTCATGTCCAGAGTCAGTGCTTGGTAGTGACGATGTGTTTGTTAGCTTACATCCAGTTATTCCAGTGGGAGATTTCGATTCAGAAAT                                                                              ]
[+] EMBL CD124715             [                                                                                                                                                                                                                                                                                                                                                                                   GGAGTGACTGGCATGCCATCAACGGTAATGGATGCACAGTGGAGAGTATTGGGATAACTGCCAGACAGTTGGTCACGAGAATCATGATCAGAGAATTGTTCATTGACAATTTGTTCTGCAACCTGGTTATCAAAAATACTAGGAGTTGAGTGATTTGTTCCAGAAGGCTGATTAGATGGATATGAAGATGAAGATGGAGAAGAGACTTTCAAAGGAGTTGCAGCTTCTTGCTGACCCCATGTGTAAGCATTATTAGGACCAACACTGCAACTGCTGCTACTGCTCCAACATTCATGTCCAGAGTCAGTGCTTGGTAGTGACGATGTGTTTGTTAGCTTACATCCAGTTATTCCAGTGGGAGATTTCGATTCAGAAAT                                                                              ]
[+] EMBL CD124742             [                                                                                                                                                                                                                                                                                                                                                                                   GGAGTGACTGGCATGCCATCAACGGTAATGGATGCACAGTGGAGAGTATTGGGATAACTGCCAGACAGTTGGTCACGAGAATCATGATCCGAGAATTGTTCATTGACAATTTGTTCTGTAACCTGGTTATCAAAAATACTAGGAGTTGAGTGATTTGTTCCAGAAGGCTGATTAGATGGATATGAAGATGAAGATGGAGAAGAGACTTTCAAAGGAGTTGCAGCTTCTTGCTGACCCCATGTGGAAGCATTATTAGGACCAACACTGCAACTGCTGCTACTGCTCCAACGTTCATGTCCAGAGTCAGTGCTTGGTAGTGACGATGTGTTTGTTAGCTTACATCCAGTTATTCCAGTGGGAGATTTCGATTCAGAAAT                                                                              ]
[+] EMBL CD124667             [                                                                                                                                                                                                                                                                                                                                                                                   GGAGTGACTGGCATGCCATCAACGGTAATGGATGCACAGTGGAGAGTATTGGGATAACTGCCAGACAGTTGGTCACGAGAATCATGATCAGAGAATTGTTCATTGACAATTTGTTCTGTAACCTGGTTATCAAAAATACTAGGAGTTGAGTGATTTGTTCCAGAAGGCTGATTAGATGGATATGAAGATGAAGATGGAGAAGAGACTTTCAAAGGAGTTGCAGCTTCTTGCTGACCCCATGTGGAAGCATTATTAGGACCAACACTGCAACTGCTGCTACTGCTCCAACATTCATGTCCAGAGTCAGTGCTTGGTAGTGACGATGTGTTTGTTAGCTTACACCCAGTTATTCCAGTGGGAGATTTCGATTCAGAAAT                                                                              ]
[+] EMBL CD124695             [                                                                                                                                                                                                                                                                                                                                                                                   GGAGTGACTGGCATGCCATCAACGGTAATGGATGCACAGTGGAGAGTATTGGGATAACTGCCAGACAGTTGGTCACGAGAATCATGATCAGAGAATTGTTCATTGACAATTTGTTCTGTAACCTGGTTATCAAAAATACTAGGAGTTGAGTGATTTGTTCCAGAAGGCTGATTAGATGGATATGAAGATGAAGATGGAGAAGAGACTTTCAAAGGAGTTGCAGCTTCTTGCTGACCCCATGTGGAAGCATTATTAGGACCAACACTGCAACTGCTGCTACTGCTCCAACATTCATGTCCAGAGTCAGTGCTTGGTAGTGACGATGTGTTTGTTAGCTTACACCCAGTTATTCCAGTGGGAGATTTCGATTCAGAAAT                                                                              ]
[-] EMBL CD124830             [                                                                                                                                                                                                                                                                                                                                                                                    GAGTGACTGGCATGCCATCAACGGTAATGGATGCACAGTGGAGAGTATTGGGGTAACTGCCAGACAGTTGGTCACGAGAATCATGATCAGAGAATTGT                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD116376             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGATGTGTTTGTTAGCTTACATCCAGTTATTCCAGTGGGAGATTTCGATTCAGAAATAGCTTCCTTGACAGTGACTAAAACAACCTCTGAAGAATCAAGACCCTTAGGTGTAGAAGATGTCAGCATGGGCATGTC]
consensusID : consensus_10074#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence 
                              [CAATTGGTTCACACAGAATCTGGTCCAAAACTATATTCGGAGCATTTGTCGAATCTAAAATCTGCTCCACTACATCAGGTTCAGTCATACGATTAGTAGGTGGGTTATTCGGACTAAAAGACAGTGATTTTACATTAGAATAGACATTATTTTGTGAGAATTCCTGCTGTTCCTGCAAAGACACGCTATTCACAATTTCACATGATAACTGAATATCATTGTCCAATGTGTTTGGATCACGTTGGTAATAATGAACTGACTGGTTTGACACGGGAAGAGAATATAGAGACTGGATATGAGCATCACCCGAAGGGTTAATCGAACGGGTTTTGTTCACAGATAAACATCGTTCATTATGGAACAACGGCATATTACTATTGGATGTATTTTCAAAGGGTCTATTGATTTGGTTTGACATACGGATAAATGAATGAGGTTTCTGCTCGAAGCTTTTAAGGACTGGGTGGTTGAATAACATACTATCAGTGTCTTCCGAGACACAAC]
[+] EMBL CD190808             [CAATTGGTTCACACAGAATCTGGTCCAAAACTATATTCGGAGCATTTGTCGAATCTAAAATCTGCTCCACTACATCAGGTTCAGTCATACGATTAGTAGGTGGGTTATTCGGACTAAAAGACAGTGATTTTACATTAGAATAGACATTATTTTGTGAGAATTCCTGCTGTTCCTGCAAAGACACGCTATTCACAATTTCACATGATAACTGAATATCATTGTCCAATGTGTTTGGATCACGTTGGTAATAATGAACTGACTGGTTTGACACGGGAAGAGAATATAGAGACTGGATATGAGCATCACCCGAAGGGTTAATCGAACGGGTTTTGTTCACAGATAAACATCGTTCATTATGGAACAACGGCATATTACTATTGGATGTATTTTCAAAGGGTCTATTGATTTGGTTTGACATACGGATAAATGAATGAGGTTTCTGCTCGAAGCTTTTAAGGACTGGGTGGTTGAATAACATACTATCAGTGTCTTCCGAGACACAAC]
consensusID : consensus_10074#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 328 fasta sequence 
                              [TACATCAGTTTCATTAGGGTTATAGTTNTGATATTCTGACTGGACGTATGAGGAATGATAAGTTGGTTCTGAATGTAAGGATGATGGATTAAATGAATACTGACACATCTGTTGAACGTCACTTTGCTGATAACTGAACATTACCTGATTAGACGTTAAATCATTAGACACATAAGAATTATGACTTGAGTAAAATGGAACAGAACTTTGCTGATTCACTGACTGATCATCTGAAGATCTATACATAGAAGTAATCTGGTTGGAAGCACTATGATCATGTGAATATCATTGTCCAATGTGTTTGGATCACGTTGGTAATAATGAACTG]
[-] EMBL CD070558             [TACATCAGTTTCATTAGGGTTATAGTTNTGATATTCTGACTGGACGTATGAGGAATGATAAGTTGGTTCTGAATGTAAGGATGATGGATTAAATGAATACTGACACATCTGTTGAACGTCACTTTGCTGATAACTGAACATTACCTGATTAGACGTTAAATCATTAGACACATAAGAATTATGACTTGAGTAAAATGGAACAGAACTTTGCTGATTCACTGACTGATCATCTGAAGATCTATACATAGAAGTAATCTGGTTGGAAGCACTATGATCATGTGAATATCATTGTCCAATGTGTTTGGATCACGTTGGTAATAATGAACTG]
consensusID : consensus_10074#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 141 fasta sequence 
                              [AGCCCGGTACCCGAGTTTTTAAAGGAGCTGCGGCTTCTTGCTGACCCCATGTGGAAGCATTATTAGGACCAACACTGCAACTGCTGCTACTGCTCCAACATTCATGTCCAGAGTCAGTGCTTGGTAGTGACGATGTGTTTG]
[+] EMBL CD168089             [AGCCCGGTACCCGAGTTTTTAAAGGAGCTGCGGCTTCTTGCTGACCCCATGTGGAAGCATTATTAGGACCAACACTGCAACTGCTGCTACTGCTCCAACATTCATGTCCAGAGTCAGTGCTTGGTAGTGACGATGTGTTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10074#0      TAAATGAATACTGACACATCTGTTGAACGTCACTTTGCTGATAACTGAACATTACCTGAT 60
consensus_10074#3      ------------------------------------------------------------
consensus_10074#2      ------------------------------------------------------------
consensus_10074#1      ------------------------------------------------------------
                                                                                   
consensus_10074#0      TAGACGTTAAATCATTAGACACATAAGAATTATGACTTGAGTAAAATGGAACAGAACTTT 120
consensus_10074#3      ------------------------------------------------------------
consensus_10074#2      ------------------------------------------------------------
consensus_10074#1      ------------------------------------------------------------
                                                                                   
consensus_10074#0      GCTGATTCACTGACTGATCATCTGAAGATCTATACATAGAAGTAATCTGGTTGGAAGCAC 180
consensus_10074#3      ------------------------------------------------------------
consensus_10074#2      ------------------------------------------------------------
consensus_10074#1      ------------------------------------------------------------
                                                                                   
consensus_10074#0      TATGATCATGTGAATATTGTAGACGGGGATTTTCGAAATTACAAGTAGGAGATTGGGAAT 240
consensus_10074#3      ------------------------------------------------------------
consensus_10074#2      ------------------------------------------------------------
consensus_10074#1      ------------------------------------------------------------
                                                                                   
consensus_10074#0      TTCGCACAAAGCTAGTACTGTGAGGATAAGATGAATGACCATGCAGAAGTTGACTGGTAT 300
consensus_10074#3      ------------------------------------------------------------
consensus_10074#2      ------------------------------------------------------------
consensus_10074#1      ------------------------------------------------------------
                                                                                   
consensus_10074#0      TGTTTATACGAGCATTCTTATTTGACTTCAAAGGTAACGTTTGATATGATCCGACGACTG 360
consensus_10074#3      ------------------------------------------------------------
consensus_10074#2      ------------------------------------------------------------
consensus_10074#1      --------------CAATTGGTTCACACAGAATCTGGTCCAAAACTATATTCGGAGCATT 46
                                                                                   
consensus_10074#0      ACGACATTTGAGGAGTGACTGGCATGCCATCAACGGTAATG----GATGCACAGTGGAGA 416
consensus_10074#3      ------------------------------------------------------------
consensus_10074#2      -------------------------TACATCAGTTTCATTA----GGGTTATAGTTNTGA 31
consensus_10074#1      TGTCGAATCTAAAATCTGCTC-CACTACATCAGGTTCAGTCATACGATTAGTAGGTGGGT 105
                                                                                   
consensus_10074#0      GTATTGGGATAACTGCCAGACAGTTGGTCACGAGAATCATGATCAGAGAATTGTTCATTG 476
consensus_10074#3      ------------------------------------------------------------
consensus_10074#2      TATTCTGACTGGACGTATGAGGAATGATAAGTTGGTTCTGAATGTAAGGATGATGGATTA 91
consensus_10074#1      TATTCGGACTAAAAGACAGTGATTTTAC-ATTAGAATAGACATTATTTTGTGAGAATTCC 164
                                                                                   
consensus_10074#0      ACAATTTGTTCTGTAACCTGGTTATCAAAAATACTAGGAGTTGAGTGATTTGTTCCAGAA 536
consensus_10074#3      ------------------------------------------------------------
consensus_10074#2      AATGAATACTGACACATCTGTTGAACGTCACT--TTGCTGATAACTGAACATTACCTGAT 149
consensus_10074#1      TGCTGTTCCTGCAAAGACACGCTATTCACAATTTCACATGATAACTGAATATCATTGTCC 224
                                                                                   
consensus_10074#0      GGCTGATT-AGATGG--ATATGAAGATGAAGATGGA-GAAGAGACT---TTCAAAGGAGT 589
consensus_10074#3      ----------------------------AGCCCGGT-ACCCGAGTT---TTTAAAGGAGC 28
consensus_10074#2      TAGACGTT-AAATCA--TTAGACACATAAGAATTATGACTTGAGTAAAATGGAACAGAAC 206
consensus_10074#1      AATGTGTTTGGATCACGTTGGTAATAATGAACTGACTGGTTTGACAC--GGGAAGAGAAT 282
                                                                           **  **  
consensus_10074#0      T--GCAGCTTC--TTGCTGACCCCATGTGGAAGCATTATTAGGACCAAC---ACTGCAAC 642
consensus_10074#3      T--GCGGCTTC--TTGCTGACCCCATGTGGAAGCATTATTAGGACCAAC---ACTGCAAC 81
consensus_10074#2      TTTGCTGATTCACTGACTGATCATCTGAAGATCTATACATAGAAGTAATCTGGTTGGAAG 266
consensus_10074#1      ATAGAGACTGGATATGAGCATCACCCGAAGGGTTAATCGAACGGGTTTTGTTCACAGATA 342
                          *    *          * *    *  *    *     *                *  
consensus_10074#0      TGCTGCTACTGCTCCAACATTCATGTCCAGAGTCAGTG---CTTGGTAGTGACGATGTGT 699
consensus_10074#3      TGCTGCTACTGCTCCAACATTCATGTCCAGAGTCAGTG---CTTGGTAGTGACGATGTGT 138
consensus_10074#2      CACTATGATCATGTGAATATCATTGTCCAATGTGTTTGGATCACGTTGGTAATAATGAAC 326
consensus_10074#1      AACATCGTTCATTATGGAACAACGGCATATTACTATTGGATGTATTTTCAAAGGGTCTAT 402
                         *               *     *   *       **        *    *   *    
consensus_10074#0      TTGTTAGCTTACATCCAGTTATTCCAGTGGGAGATTTCGATTCAGAAATAGCTTCCTTGA 759
consensus_10074#3      TTG--------------------------------------------------------- 141
consensus_10074#2      TG---------------------------------------------------------- 328
consensus_10074#1      TGATTTGGTTTGACATACGGATAAATGAATGAGGTTTCTGCTCGAAGCTTTTAAGGACTG 462
                       *                                                           
consensus_10074#0      CAGTGACTAAAACAACCTCTGAAGAATCAAGACCCTTAGGTGTAGAAGATGTCAGCATGG 819
consensus_10074#3      ------------------------------------------------------------
consensus_10074#2      ------------------------------------------------------------
consensus_10074#1      GGTGGTTGAATAACATACTATCAGTGTCTTCCGAGACACAAC------------------ 504
                                                                                   
consensus_10074#0      GCATGTC 826
consensus_10074#3      -------
consensus_10074#2      -------
consensus_10074#1      -------
                              
 | 
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||