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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10082#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 833 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTATATCAATACAAGTTCATTATAATTATTATAACAAATGGCAAGAAAATACAATTAATAAAAGTTGATAAACTTTCCCAAACGACGATATTTGATGATAGTAATATATACTGTTTTTCACTAGTGAATGACTTTGAGATGGGAAAGCAAGTATGGGTAAAACATAAGCGTACAAACACAAAAAAATGATCAATAAAAAATATGAAAAAAGCTGTTTCAAAATAATCTGGAATTACATAACCTATGTACAGGTACTAAAATGAGATAATTATGCATATTATCAAATGCAAAGAAACGAAATTTTGGAAGCAGTAGTTCAAGAACCATTCGCATCTGTAGCTGTCATGGAAT-CGTCATTGTCTGAAGTC-AGAGGAATGAATTCCGGAGGAGGATATACGTTGCGTAGTGAACCAGCTGGAGCAGCAACAGGA-CCAGGATAATTA-TATTCACAAGTATCTTCTAGTTTGGTAAGTAAAGTTTTACAGGCGCCTTTAGAAACAATGGTTAATTTGGACAATTTCTGATGACCAGACTTGTTCAAAAATGACTTTTGCACCCATATATGGCGCTTATTACACAAGCGACCTAGCGGGCAACGACCACGAGAGAAATCTGAACATATAGCCGTCTTTGGTGGGTGCCTCACATGCAAATAAGGACAGTGAACACGTTCGCACTTTTCGGACTCATAGTAAGTACATTGTGGCAGTCTACACGGATCTAATACATGAGCGAGTGGACAAGATTTGCTTCCCAGAGAACAGCTTTGTTGTAAAAACCTTGGACAGATACGTAGATAGTTCTCATCAT]
[+] EMBL AI395109 [TTTTTTTTTTTTTTTTTTTTTTTTTATATCAATACAAGTTCATTATAATTATTATAACAAATGGCAAGAAAATACAATTAATAAAAGTTGATAAACTTTCCCAAACGACGATATTTGATGATAGTAATATATACTGTTTTTCACTACTGAATGACTTTGAGATGGGAAAGCAAGTATGGGTAAAACATAAGCGTACAAACACAAAAAAATGCTCAATAAAAAATATGACAAAAGCTGTTTCAAAATAATCTGGAATTACATAACCTATGTACAGGTACTAAAATGAGATAATTATGCATATTATCAAATGCAAAGAAACGAAATTTTGGAAGCAATAGTTCAAGACACATTCGCATCTGTAGCTGTCATGGCAT CCTCATTGT ]
[+] EMBL CD074587 [ CAAGTTCATTATATTTTTTATAACAAATGGCAACAAAATACAATTAATAAAAGTTGATAAACTTTCCCAAACGACGATATTTGATGATAGTAATATATACTGTTTTTCACTAGTGAATGACTTTGAGATGGGAAAGCAAGTATGGGTAAAACATAAGCGTACAAACACAAAAAAATGATCAATAAAAAATATGAAAAAAGCTGTTTCAAAATAATCTGGAATTACATAACCTATGTACAGGTACTAAAATGAGATAATTATGCATATTATCAAATGCAAAGAAACGAAATTTTGGAAGCAGTAGTTCAAGAACCATTCGCATCTGTAGCTGTCATGGAAT CGTCATTGTCTGAAGTC AGAGGAATGAATTCCGGAGGAGGATATACGTTGCGTAGTGAACCAGCTGGAGCAGCAACAGGA CCAGGATAATTA TATTCACAAGTATCTTCTAGTTTGGTAAGTAAAGTTTTACAGGCGCCTTTAGAAACAATGGTTAATTTGGACAATTTCTGATGACCAGACTTGTTCAAAAATGACTTTTGCACCCATATATGGCGCTTATTACACAAGCGACCTAGCGGGCAACGACCACGAGAGAAATCTGAACATATAGCCGTCTTTGGTGGGTGCCTCACATGC ]
[+] EMBL AI066999 [ TTCATTATAATTATTATAACAAATGGCAAGAAAATACAATTAATAAAAGTTGATAAACTTTCCCAAACGACGATATTTGATGATAGTAATATATACTGTTTTTCACTAGTGAATGACTTTGAGATGGGAAAGCAAGTATGGGTAAAACATAAGCGTACAAACACAAAAAAATGATCAATAAAAAATATGAAAAAAGCTGTTTCAAAATAATCTGGAATTACATAACCTATGTACAGGTACTAAAATGAGATAATTATGCATATTATCAAATGCAAAGAAACGAAATTTTGGAAGCAGTAGTTCAAGAACCATTCGCATCTGTAGCTGTCATGGAAT CG ]
[+] EMBL AI067800 [ TTCATTATAATTATTATAACAAATGGCAAGAAAATACAATTAATAAAAGTTGATAAACTTTCCCAAACGACGATATTTGATGATAGTAATATATACTGTTTTTCACTAGTGAATGACTTTGAGATGGGAAAGCAAGTATGGGTAAAACATAAGCGTACAAACACAAAAAAATGATCAATAAAAAATATGAAAAAAGCTGTTTCAAAATAATCTGGAATTACATAACCTATGTACAGGTACTAAAATGAGATAATTATGCATATTATCAAATGCAAAGAAACGAAATTTTGGAAGCAGTAGTTCAAGAACCATTCGCATCTGTAGCTGTCATGGAAT CGTCATTGTCTGAAGTC AGAGGAATGAATTCCGGAGGAGGATATACGTTGCGTAGTGAACCAGCTGGAGCAGCANCAGGA C ]
[-] EMBL CD078436 [ TGGGTAAAACATAAGCGTACAAACNCAAAAAAATGATCAATAAAAAATATGAAAAAAGCTGTTTCAAAATAATCTGNAATTACATAACCTATGTACAGGTACTAAAATGAGATAATTATGCATATTATCAAATGCAAAGAAACGAAATTTTGGAAGCAGTAGTTCAAGAACCATTCGCATCTGTAGCTGTCATGGAAT CGTCATTGTCTGAAGTC AGAGGAATGAATTCCGGAGGAGGATATACGTTGCGTAGTGAACCAGCTGGAGCAGCAACAGGA CCAGGATAATTA TATTCACAAGTATCTTCTAGTTTGGTAAGTAAAGTTTTACAGGCGCCTTTAGAAACAATGGTTAATTTGGACAATTTCTGATGACCAGACTTGTTCAAAAATGACTTTTGCACCCATATATGGCGCTTATTACACAAGCGACCTAGCGGGCAACGACCACGAGAGAAATCTGAACATATAGCCGTCTTTGGTGGGTGCCTCACATGCAAATAAGGACAGTGAACACGTTCGCACTTTTCGGACTCATAGTAAGTACATTGTGGCAGTCTACACGGATCTAATACATGAGCGAGTGGACAAGATTTGCTTCC ]
[-] EMBL CD062548 [ AAGAACCATTCGCATCTGTAGCTGTCATGGAAT CGTCATTGTCTGAAGTC AGAGGAATGAATTCCGGAGGAGGATATACGTTGCGTAGTGAACCAGCTGGAGCAGCAACAGGA CCA GATAATTA TATTCACAAGTATCTTCTAGTTTG CAGTAAAGTTT ]
[+] EMBL CD062538 [ GGAATGCGTCATTGTCTGAAGTC AGAGGAATGAATTCCGGAGGAGGATATACGTTGCGTAGTGAACCAGCTGGAGCAGCAACAGGA CCAGGATAATTA TATTCACAAGTATCTTCTAGTTTGGTAAGTAAAGTTTTACAGGCGCCTTTAGAAACAATGGTTAATTTGGACAATTTCTGATGACCAGACTTGTTCAAAAATGACTTTTGCACCCATATATGGCGCTTATTACACAAGCGACCTAGCGGGCAACGACCCCGAGAGAAATCTGAACATATAGCCGTCTTTGGTGGGTGCCTCACATGCAAATAAGGACAGTGAACACGTTCGCACTTTTCGGACTCATAGTAAGTACATTGTGGCAGTCTACACGGATCTAATACATGAGCGAGTG ]
[-] EMBL CD062453 [ cctcgGGAAT CGTCATTGTCTGAAGTC AGAGGAATGAATTCCGGAGGAGGATATACGTTGCGTAGTGAACCAGCTGGAGCAGCAACAGGATCCAGGATAATTAGTATTCACAAGTATCTTCTAGTGTGGTAAGTAAAGTTTTACAGGCGCCTTTAGAAA ]
[-] EMBL CD061849 [ GAAGTC AGAGGAATGAATTCCGGAGGAGGATATACGTTGCGTAGTGAACCAGCTGGAGCAGCAACAGGA CCAGGATAATTA TATTCACAAGTATCTTCTAGTTTGGTAAGTAAAGTGCGACAGGCGCCTTTAGAAACAATGGTTAATTTGGACAATTTCTGATGACCAGACTTGTTCAAAAATGACTTGTGCACCCATATATGGCGCTTATTACACAAGCGACCTAGCGGGCAACGACCACGAGAGAAATCTGAACATATAGCCGCCTTT ]
[+] EMBL CD061768 [ AGTCGAGAGGAAT AATTCCGGAGGAGGATATACGTTGCGTAGTGAACCAGCTGGAGCAGCAACAGGA CCAGGATAATTA TATTCACAAGTATCTTCTAGTTAGGTAAGTAAAGTTTTACAGGCGCCTTTAGAAACAATGGTTAATTTGGACAATTTCTGATGACCAGACTTGTTCAAAAATGACTTTTGCACCCATATATGGCGCTTATTACACAAGCGACCTAGCGGGCAACGACCACGAGAGAAATCTGAACATATAGCCGCCTTTGGTGGGTGCCTCACATGCAAATAAGGACAGTGAACACGTTCGCACTTTTCGGACTCATAGTAAGTACATTGTGGCAGTCTACACGGATCTAATACATGAGCGAGTG ]
[+] EMBL BG931557 [ ATATACGTTGCGTAGTGAACCAGCTGGAGCAGCAACAGGA CCAGGATAATTA TATTCACAAGTATCTTCTAGTTTGGTAAGTAAAGTTTTACAGGCGCCTTTAGAAACAATGGTTAATTTGGACAATTTCTGATGACCAGACTTGTTCAAAAATGACTTTTGCACCCATATATGGCGCTTATTACACAAGCGACCTAGCGGGCAACGACCACGAGAGAAATCTGAACATATAGCCGTCTTTGGTGGGTGCCTCACATGCAAATAAGGACAGTGAACACGTTCGCACTTTTCGGACTCATAGTAAGTACATTGTGGCAGTCTACACGGATCTAATACATGAGCGAGTGGACAAGA ]
[-] EMBL CD080668 [ GCAACGACCACGAGAGAAATCTGACCATATAGCCGTCTTTGGTGGGTGCCTCACATGCAAATAAGGACAGTGAACACGTTCGCACTTTTCGGACTCATAGTAAGTACAATGTGGCAGTCTACACGGATCTAATACATGAGCGAGTGGACAACATTTGCTTCCCAGAGAACAGCTTTGTTGTAAAAACC ]
[-] EMBL CD059481 [ AGCCGTGTTTGGTGGGTGCCTCACATGCAAATAAGGACAGTGAACACGTTCGCACTTTTCGGACTCATAGTAAGTACATTGTGGCAGTCTACACGGATCTAATACATGAGCGAGTGGACAAGATTTGCTTCCCAGAGAACAGCTTTGTTGTAAAAACCTTGGACAGATACGTAGATAGTTCTCATCAT]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||