These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10086#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 989 fasta sequence [GTAGAGCGCGTATTACGAAGACGTTTCGTTTATGGTCTGGCAATCAAGATGGATCGGAAGGCAGCAAATTTTGTTCACTCACAAGCCGTTTCCAGAGACTACATATCACAGCCTCGCATAACTTACAAAACCGTCTCAGGAGTAAATGGACCTCTCGTCATACTTGATGATGTAAAGTTTCCTAAATTTGATGAGATTGTGAGACTAACTCTTGCTGATGGTAGTCAGCGAACGGGACAAGTTTTAGAAGTTTGCGGCAAAAGGGCCATTGTTCAGGTATTCGAGGGTACTAGTGGCATTGATGCGAAGAACACTGTATGCGAATTCACAGGAGATATCCTCCGTACACCTGTTTCAGAAGATATGCTAGGTCGTATATTCAATGGTTCTGGAAAACCGAAAGATAAAGGTCCAGCAATCCTTGCAGAAGATTACCTTGACATTCAGGGTCAACCAATAAATCCATGGTCACGCATTTATCCAGAAGAAATGATCCAAACTGGCATATCAAGCATCGATGTGATGAATTCGATTGCACGTGGCCAAAAGATCCCTATATTTTCCGCTTCTGGTCTACCTCACGATGAAATCGCTGCCCAGATATGTCGTCAAGCTGGTCTAGTCAAGTTACCCGGAAAAAGCGTTACAGATAGTGATGTAGACAATTTCGCCATTGTATTCGCAGCAATGGGTGTTAATATGGAGACTGCTCGGTTTTTCATGCAAGATTTTAAGGAAAATGGTTCAATGGAGAATGTGTGTCTGTTTTTAAATTTGGCGAACGATCCAACTATCGAGCGCATCATAACACCTAGAATCGCTCTTACAACAGCCGAATATTTGGCCTATCAATGTGAAAAGCATGTGTTAGTAATCCTTACCGATATGAGTTCATACGCAGAAGCATTGCGTGAGGTATCAGCAGCTCGTGAGGAAGTGCCAGNACGTCGTGGTTTCCCAGGTTATATGTACACTGACTTGGCTTCAAT] [+] EMBL CD131833 [GTAGAGCGCGTATTACGAAGACGTTTCGTTTATGGTCTGGCAATCAAGATGGATCGGAAGGCAGCAAATTTTGTTCACTCACAAGCCGTTTCCAGAGACTACATATCACAGCCTCGCATAACTTACAAAACCGTCTCAGGAGTAAATGGACCTCTCGTCTTACTTGATGACGTAAAGTTTCCTAAATTTGATGAGATTGTGAGACTAACTCTTGCTGATGGTAGTCAGCGAACGGGACAAGTTTTAGAAGTTTGCGGCAAAAGGGCCATTGTTCAGGTATTCGAGGGTACTAGTGGCATTGATGCGAAGAACACTGTATGCGAATTCACAGGAGATATCCTCCGTACACCTGTTTCAGAAGATATGCTAGGTCGTATATTCAATGGTTCTGGAAAACCGAAAGATAAAGGTCCAGCAATCCTTGCcg ] [+] EMBL CD128206 [ cgtagCGAAGACGTTTCG TTATGGTCTGGC ATCAAGATGGATCGGAAGGCAGCAAA TTTGTTCACTCACAAGCCGTTTCCAGAGACTACATATCACAGCCTCGCATAACTTACAAAACCGTCTCAGGAGTAAATGGACCTCTCGTCATACTTGATGATGTAAAGTTTCCTAAATTTGATGAGATCGTGAGACTAACTCTTGCTGATGGTAGTCAGCGAACGGGACAAGTATAAGAA ] [+] EMBL CD179810 [ TTCGTTTATGGTCTGGCAATCAAGATGGATCGGAAGGCATCAAATAATGTTCACTCACAAGCCGTTTCCAGAGACTACATATCACAGCCTCGCATAACTTACAAAACCGTCTCAGGAGTAAATGGACCTCTCGTCATACTTGATGATGTAAAGTTTCCTAAATTTGATGAGATTGTGAGACTAACTCTTGCTGATGGTAGTCAGCGAACGGGACAAGTTTTATAAGTTTGCGGCAAAAGGGCCATTGTTCAAGTATTCGAGGGTACTAGTGGCATTGATGCGAAGAACACTGTATGCGAATTCACAGGAGATATCCTCCGTACACCTGTTTCAGAAGATATGCTAGGTCGTATATTCAATGGTTCTGGAAAACCGAAAGATAAAGGTCCAGCAATCCTTGCAGAAGAT ] [+] EMBL CD094459 [ TTCGTTTATGGTCTGGCAATCAAGATGGATCGGAAGGCAGCAAATTTTGTTCACTCACAAGCCGTTTCCAGAGACTACATATCACAGCCTCGCATAACTTACAAAACCGTCTCAGGAGTAAATGGACCTCTCGTCATACTTGATGATGTAAAGTTTCCTAAATTTGATGAGATTGTGAGACTAACTCTTGCTGATGGTAGTCAGCGAACGGGACAAGTTTTAGAAGTTTGCGGCAAAAGGGCCATTGTTCAGGTATTCGAGGGTACTAGTGGCATTGATGCGAAGAACACTGTATGCGAATTCACAGGAGATATCCTCCGTACACCTGTTTCAGAAGATATGCTAGGTCGTATATTCAATGGTTCTGGAAAACCGAAAGATAAAGGTCCAGCAATCCTTGCAGAAGATTACCTTGACATTCAGGGTCAACCAATAAATCCATGGTCACGCATTTATCCAGAAGAAATGATCCAAACTGGCATATCAAGCATCGATGTGATGAATTCG ] [+] EMBL CD185830 [ TTCGTTTATGGTCTGGCAATCAAGGTGGATCGGAAGGCAGCAAATTTTGTTCACTCACAAGCCGTTTCCAGAGACTACATATCACAGCCTCGCATAACTTACAAAACCGTCTCAGGAGTAAATGGACCTCTCGTCATACTTGATGATGTAAAGTTTCCTAAATTTGATGAGATTGTGAGACTAACTCTTGCTGATGGTAGTCAGCGAACGGGACAAGTTTTAGAAGTTTGCGGCAAAAGGGCCATTGTTCAGGTATTCGAGGGTACTAGTGGCATTGATGCGAAGAACACTGTATGCGAATTCACAGGAGATATCCTCCGTACACCTGTTTCAGAAGATATGCTAGGTCGTATATTCAATGGTTCTGGAAAACCGAAAGATAAAGGTCCAGCAATCCTTGCAGAAGATTACCTTGACATTCAGGGTCAACCAATAAATCCATGGTCACGCATTTATCCAGAAGAAATGATCCAAACTGGCATATCAAGCATCGATGTGATGAATTCGATTGCACGTGGCCAAAAGATCCCTATATTTTCCGCTTCTGGTCTACCTCACGAT ] [-] EMBL CD124954 [ tCTGTATGCGAATTCACAGTAGATATCCTCCGTACACCTGTTTCAGAAGATATGGTAGGTCGTATATTCAATGGTTCTGGAAAACCGAAAGATAAA ] [-] EMBL CD094665 [ GGAGATATCCTCCGTACACCTGTTTCAGAAGATATGCTAGGTCGTATATTCAATGGTTCTGGAAAACCGAAAGATAAAGGTCCAGCAATCCTTGCAGAAGATTACCTTGACATTCAGGGTCAACCAATAAATCCATGGTCACGCATTTATCCAGAAGAAATGATCCAAACTGGCATATCAAGCATCGATGTGATGAATTCGATTGCACGTGGCCAAAAGATCCCTATATTTTCCGCTTCTGGTCTACCTCACGATGAAATCGCTGCCCAGATATGTCGTCAAGCTGGTCTAGTCAAGTTACCCGGAAAAAGCGTTACAGATAGTGATGTAGACAATTTCGCCATTGTATTCGCAGCAATGGGTGTTAATATGGAGACTGCTCGGTTTTTCATGCAAGATTTTAAGGAAAATGGTTCAATGGAGAATGTGTGTCTGTTTTTAAATTTGGCGAACGATCCAACTATCGAGCGCATCATAACACCTAGAATCGCTCTTACAACAGCCGAATATTTGGCCTATCAATGTGAAAAGCATGTGTTAGTAATCCTTACCGATAT ] [-] EMBL CD095283 [ AAAGATAAAGGTCCAGCAATCCTTGCAGAAGATTACCTTGACATTCAGGGTCAACCAATAAATCCATGGTCACGCATTTATCCAGAAGAAATGATCCAAACTGGTATATCAAGCATCGATGTGATGAGTTCGATTGCACGTGGCCAAAAGATCCCTATATTTTCCGCTTCTGGTCTACCTCACGATGGAATCGCTGCCCAGATATGTCGTCAAGCTGGTCTAGTCAAGTTACCCGGAAAAAGCGTTACAGATAGTGATGTAGACAATTTCGCCATTGTATTCGCGGCAATGGGTGTTAACATGGAGACTGCTCGGTTTTTCATGCAAGATTTTAAGGAGAATGGTTCAATGGAGAATGTGTGTCTGTTTTTAAATTTGGCGAACGATCCAACTATCGAGCGCATCATAACACCTAGAATCGCTCTTACAACAGCCGAATATTTGGCCTATCAATGTGAAAAGCATGTGTTAGTAGTCCTTACCGATAT ] [-] EMBL CD095237 [ AAAGATAAAGGTCCAGCAATCCTTGCAGAAGATTACCTTGACATTCAGGGTCAACCAATAAATCCATGGTCACGCATTTATCCAGAAGAAATGATCCAAACTGGCATATCAAGCATCGATGTGATGAATTCGATTGCACGTGGCCAAAAGATCCCTATATTTTCCGCTTCTGGTCTACCTCACGATGAAATCGCTGCCCAGATATGTCGTCAAGCTGGTCTAGTCAAGTTACCCGGAAAAAGCGTTACAGATAGTGATGTAGACAATTTCGCCATTGTATTCGCAGCAATAGGTGTTAATATGGAGACTGCTCGGTTTTTCATGCAAGATTTTAAGGAAAATGGTTCAATGGAGAATGTGTGTCTGTTTTTAAATTTGGCGAACGATCCAACTATCGAGCGCATCATAACGCCTAGAATCGCTCTTACAACAGCCGAATATTTGGCCTATCAATGTGAAAAGCATGTGTTAGTAATCCTTACCGATAT ] [-] EMBL CD094612 [ CCAGCAATCCTTGCAGAAGATTACCTTGACATTCAGGGTCAACCAATAAATCCATGGTCACGCATTTATCCAGAAGAAATGATCCAAACTGGCATATCAAGCATCGATGTGATGAATTCGATTGCACGTGGCCAAAAGATCCCTATATTTTCCGCTTCTGGTCTACCTCACGATGAAATCGCTGCCCAGATATGTCGTCAAGCTGGTCTAGTCAAGTTACCCGGAAAAAGCGTTACAGATAGTGATGTAGACAATTTCGCCATTGTATTCGCAGCAATGGGTGTTAATATGGAGACTGCTCGGTTTTTCATGCAAGATTTTAAGGAAAATGGTTCAATGGAGAATGTGTGTCTGTTTTTAAATTTGGCGAACGATCCAACTATCGAGCGCATCATAACACCTAGAATCGCTCTTACAACAGCCGAATATTTGGCCTATCAATGTGAAAAGCATGTGTTAGTAATCCTTACCGATAT ] [+] EMBL AI975741 [ ATTACCTTGACATTCAGGGTCAACCAATAAATCCATGGTCACGCATTTATCCAGAAGAAATGATCCAAACTGGCATATCAAGCATCGATGTGATGAATTCGATTGCACGTGGCCAAAAGATCCCTATATTTTCTGCTTCTGGTCTACCTCACGATGAAATCGCTGCCCAGATATGTCGTCAAGCTGGTCTAGTCAAGTTACCCGGAAAAAGCGTTACAGATAGTGATGTAGACAATTTCGCCATTGTATTCGCAGCAATGGGTGTTAATATGGAGACTGCTCGGTTTTTCATGCAAGATTTTAAGGAAAATGGTTCAATGGAGAATGTGTGTCTGTTTTTAAATTTGGCGAACGATCCAACTATCGAGCGCATCATAACACCTAGAATCGCTCTTACAACAGCCGAATATTTGGCCTATCAATGTGAAAAGCATGTGTTAGTAATCCTTACCGATATGAGTTCATACGCAGAAGCATTGCGTGAGGTATCAG ] [+] EMBL AI975087 [ ATTACCTTGACATTCAGGGTCAACCAATAAATCCATGGTCACGCATTTATCCAGAAGAAATGATCCAAACTGGCATATCAAGCATCGATGTGATGAATTCGATTGCACGTGGCCAAAAGATCCCTATATTTTCTGCTTCTGGTCTACCTCACGATGAAATCGCTGCCCAGATATGTCGTCAAGCTGGTCTAGTCAAGTTACCCGGAAAAAGCGTTACAGATAGTGATGTAGACAATTTCGCCATTGTATTCGCAGCAATGGGTGTTAATATGGAGACTGCTCGGTTTTTCATGCAAGATTTTAAGGAAAATGGTTCAATGGAGAATGTGTGTCTGTTTTTAAATTTGGCGAACGATCCAACTATCGAGCGCATCATAACACCTAGAATCGCTCTTACAACAGCCGAATATTTGGCCTATCAATGTGAAAAGCATGTGTTAGTAATCCTTACCGATATGAGTTCATACGCAGAAGCATTGCGTGAGGTATCAGCAGCTCGTGAGGAAGTGCCAGNACGTCGTGGTTTCCCAGGTTATATGTACACTGACTTGGCTTCAAT] [-] EMBL CD123517 [ ATGGTCACGCATTTATCCAGAAGAAATGATCCGAACTGGCATATCAAGCATCGATGTGATGAATTCGATTGCACGTGGCCAAAAGATCCCTAAATTATAGGCTTATGGTATACCTCACGATGAAATCGCTGCCCAGATATGTCGTCAAGCTGGTCTAGTCAAGTTACCCGGAAAAAGCGTTACAGATAGTGATGTAGGCTATTTCGCCATTGTATTGGCAGCAATGGGTGTTAATATGGAGTCTGCTCGGTTTTTCATGCAAGATTTTAAGGAAAATGGTTCAATGGAGAATGTGTGTCTGTTTTTAAATTTGGCGAACGATCCAACTATCGAGCGCATCATAACACCTAGAATCGCTGTTACAACAGCCGAATATTTGGCCTATCAATGTGAAAAGCATGTGTTAGTAATCCTTACCGATATGAGTTCATACGCAGAAGCATTGCGTGAGGTATCAGCAGTTCGTGAGGAAGTGCCAGTACG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||