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Schistosoma mansoni
cluster # 10089 cluster # 10089       Sequences # 13       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10089#0 length = 1380 sequences # 13  

consensusID : consensus_10089#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1380
fasta sequence
                              [GGGTGCTGTTCTGCGTACGCCGGTGATAATCAGGAATTGATGTCTAGCTAACGCACAATATCATGGAAAGCATAATCACCCCATATGATCTTAATATCGATCCAAAACTTTTGAGTGGTACTTCCATCCATAAGGACTTTTGAGACATCCAACAGACTTGCCCTAGATACAGGCCATTTGTATGATGCAAATAAAAGAATATCTGCACAGCTGAAATTCATTTTATACGACTTTCCAGGATGGATTGATTCTTTTTGGACAGCTACAATTTCCAAAGCGTCAAGTTCCTGATCAAACACCTGACAAATGTCCATAACTACAGATTCATGAATTTTTTGCCACAAGTGAGCTCGGAATATCTGGATGAGTGAGATCTTCAGAGTTGGAATTTTGCCGTGCATAAAAATACCAGTTAGATCAAGTTGTACTTGGAAACCAACATAGACATTAGCGCGATTGATAGTTGGAGACCACCATAATGTAAAGCGTTGATTAGGTATTTGATTCAACCCAGATCGCTGAGCGTTAGTCAACTTCTTGTACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG-ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCGATAATAAGTCATTAAACCAATTAAAGCGGTATTCCATTTGTTCACGATTTTGGTGAAAGTTGTCGATCCGGAGGCCATTAAAATTTGTCTAACTCTGTTATGGAATCGTTGCATTGAT]

[+] EMBL CD180858             [GGGTGCTGTTCTGCGTACGCCGGTGATAATCAGGAATTGATGTCTAGCTAACGCACAATATCATGGAAAGCATAATCACCCCATATGATCTTAATATCGATCCAAAACTTTTGAGTGGTACTTCCATCCATAAGGACTTTTGAGACATCCAACAGACTTGCCCTAGATACAGGCCATTTGTATGATGCAAATAAAAGAATATCTGCACAGCTGAAATTCATTTTATACGACTTTCCAGGATGGATTGATTCTTTTTGGACAGCTACAATTTCCAAAGCGTCAAGTTCCTGATCAAACACCTGACAAATGTCCATAACTACAGATTCATGAATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD178996             [                                                                                                                                                                                                                                                                GGACAGTTTCAATTTCCAAAGCGTCAAGTTCCTGATCAAACACCTGACAAATGTCCATAACTACAGATTCATGAATTTTTTGCCACAAGTGAGCTCGGAATATCTGGATGAGTGAGATCTTCAGAGTTGGAATTTTGCCGTGCATAAAAATACCAGTTAGATCAAGTTGTACTTGGAAACCAACATAGACATTAGCGCGATTGATAGTTGGAGACCACCATAATGTAAAGCGTTGATTAGGTATTTGATTCAACCCAGATCGCTGAGCGTTAGTCAACTTCTTGTACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD185954             [                                                                                                                                                                                                                                                                                                                                                                                      ccTCAGAGTTGGAATTTTGCCGTGCATAAAAATACCAGTTAGATCAAGTTGTACTTGGAAACCAACATAGACATTAGCGCGATTGATAGTTGGAGACCACCATAATGTAAAGCGTCGATTAGGTATTTGATTCAACCCAGATCGCTGAGCGTTAGTCAACTTCTTGTACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGCCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD161702             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGNTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGA                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD064326             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAACACTGGC TTCTCCCAGAAAAGA CTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD123286             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG ATCCCAACTGTCTTCTAAATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATTGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTCTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGT                                                                                                                                                                                                                                                     ]
[+] EMBL CD123305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTTACCCGAGGAATACCGCG ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAGCCACCAAGTTCTTTCGGTGTGT                                                                                                                                                                                                                                                     ]
[-] EMBL CD195077             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD125647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTAATCCGAGGAATACCGCGTATCCC ACTGTCTTCTAGATCTTCCAACGCTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD190337             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCGATAATAAGTCATTAAACCAATTAAAGCGGTATTCCATTTGTTCACGATTTTGGTGAAAGTTGTCGATCCGGAGGCCATTAAAATTTGTCTAACTCTGTTATG                ]
[+] EMBL CD122861             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATATTCAGCCCAAACACTCTGGGAATCCCGAGACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCG                                                                                                                      ]
[+] EMBL CD122972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATATTCAGCCCAAACACTCTGGGAATCCCGAGACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCG                                                                                                                      ]
[+] EMBL CD188870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTACGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCGATAATAAGTCATTAAACCAATTAAAGCGGTATTCCATTTGTTCACGATTTTGGTGAAAGTTGTCGATCCGGAGGCCATTAAAATTTGTCTAACTCTGTTATGGAATCGTTGCATTGAT]


>consensus_10089#0 GGGTGCTGTTCTGCGTACGCCGGTGATAATCAGGAATTGATGTCTAGCTAACGCACAATA TCATGGAAAGCATAATCACCCCATATGATCTTAATATCGATCCAAAACTTTTGAGTGGTA CTTCCATCCATAAGGACTTTTGAGACATCCAACAGACTTGCCCTAGATACAGGCCATTTG TATGATGCAAATAAAAGAATATCTGCACAGCTGAAATTCATTTTATACGACTTTCCAGGA TGGATTGATTCTTTTTGGACAGCTACAATTTCCAAAGCGTCAAGTTCCTGATCAAACACC TGACAAATGTCCATAACTACAGATTCATGAATTTTTTGCCACAAGTGAGCTCGGAATATC TGGATGAGTGAGATCTTCAGAGTTGGAATTTTGCCGTGCATAAAAATACCAGTTAGATCA AGTTGTACTTGGAAACCAACATAGACATTAGCGCGATTGATAGTTGGAGACCACCATAAT GTAAAGCGTTGATTAGGTATTTGATTCAACCCAGATCGCTGAGCGTTAGTCAACTTCTTG TACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGG AAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGG ATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTC CACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAA CCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATA CCGCGATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCT TCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCC CATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCT GAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGA ATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAG ACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGT ATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCG CGATAATAAGTCATTAAACCAATTAAAGCGGTATTCCATTTGTTCACGATTTTGGTGAAA GTTGTCGATCCGGAGGCCATTAAAATTTGTCTAACTCTGTTATGGAATCGTTGCATTGAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)