These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10089#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1380 fasta sequence [GGGTGCTGTTCTGCGTACGCCGGTGATAATCAGGAATTGATGTCTAGCTAACGCACAATATCATGGAAAGCATAATCACCCCATATGATCTTAATATCGATCCAAAACTTTTGAGTGGTACTTCCATCCATAAGGACTTTTGAGACATCCAACAGACTTGCCCTAGATACAGGCCATTTGTATGATGCAAATAAAAGAATATCTGCACAGCTGAAATTCATTTTATACGACTTTCCAGGATGGATTGATTCTTTTTGGACAGCTACAATTTCCAAAGCGTCAAGTTCCTGATCAAACACCTGACAAATGTCCATAACTACAGATTCATGAATTTTTTGCCACAAGTGAGCTCGGAATATCTGGATGAGTGAGATCTTCAGAGTTGGAATTTTGCCGTGCATAAAAATACCAGTTAGATCAAGTTGTACTTGGAAACCAACATAGACATTAGCGCGATTGATAGTTGGAGACCACCATAATGTAAAGCGTTGATTAGGTATTTGATTCAACCCAGATCGCTGAGCGTTAGTCAACTTCTTGTACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG-ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCGATAATAAGTCATTAAACCAATTAAAGCGGTATTCCATTTGTTCACGATTTTGGTGAAAGTTGTCGATCCGGAGGCCATTAAAATTTGTCTAACTCTGTTATGGAATCGTTGCATTGAT] [+] EMBL CD180858 [GGGTGCTGTTCTGCGTACGCCGGTGATAATCAGGAATTGATGTCTAGCTAACGCACAATATCATGGAAAGCATAATCACCCCATATGATCTTAATATCGATCCAAAACTTTTGAGTGGTACTTCCATCCATAAGGACTTTTGAGACATCCAACAGACTTGCCCTAGATACAGGCCATTTGTATGATGCAAATAAAAGAATATCTGCACAGCTGAAATTCATTTTATACGACTTTCCAGGATGGATTGATTCTTTTTGGACAGCTACAATTTCCAAAGCGTCAAGTTCCTGATCAAACACCTGACAAATGTCCATAACTACAGATTCATGAATTTT ] [+] EMBL CD178996 [ GGACAGTTTCAATTTCCAAAGCGTCAAGTTCCTGATCAAACACCTGACAAATGTCCATAACTACAGATTCATGAATTTTTTGCCACAAGTGAGCTCGGAATATCTGGATGAGTGAGATCTTCAGAGTTGGAATTTTGCCGTGCATAAAAATACCAGTTAGATCAAGTTGTACTTGGAAACCAACATAGACATTAGCGCGATTGATAGTTGGAGACCACCATAATGTAAAGCGTTGATTAGGTATTTGATTCAACCCAGATCGCTGAGCGTTAGTCAACTTCTTGTACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAA ] [-] EMBL CD185954 [ ccTCAGAGTTGGAATTTTGCCGTGCATAAAAATACCAGTTAGATCAAGTTGTACTTGGAAACCAACATAGACATTAGCGCGATTGATAGTTGGAGACCACCATAATGTAAAGCGTCGATTAGGTATTTGATTCAACCCAGATCGCTGAGCGTTAGTCAACTTCTTGTACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGCCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAA ] [+] EMBL CD161702 [ ACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGNTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGA ] [+] EMBL CD064326 [ AAACACTGGC TTCTCCCAGAAAAGA CTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACC ] [+] EMBL CD123286 [ AGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG ATCCCAACTGTCTTCTAAATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATTGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTCTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGT ] [+] EMBL CD123305 [ AGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTTACCCGAGGAATACCGCG ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAGCCACCAAGTTCTTTCGGTGTGT ] [-] EMBL CD195077 [ TGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTC ] [+] EMBL CD125647 [ TTAATCCGAGGAATACCGCGTATCCC ACTGTCTTCTAGATCTTCCAACGCTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTT ] [-] EMBL CD190337 [ CGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCGATAATAAGTCATTAAACCAATTAAAGCGGTATTCCATTTGTTCACGATTTTGGTGAAAGTTGTCGATCCGGAGGCCATTAAAATTTGTCTAACTCTGTTATG ] [+] EMBL CD122861 [ ATATTCAGCCCAAACACTCTGGGAATCCCGAGACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCG ] [+] EMBL CD122972 [ ATATTCAGCCCAAACACTCTGGGAATCCCGAGACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCG ] [+] EMBL CD188870 [ AGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTACGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCGATAATAAGTCATTAAACCAATTAAAGCGGTATTCCATTTGTTCACGATTTTGGTGAAAGTTGTCGATCCGGAGGCCATTAAAATTTGTCTAACTCTGTTATGGAATCGTTGCATTGAT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||