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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10089#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1380 fasta sequence
[GGGTGCTGTTCTGCGTACGCCGGTGATAATCAGGAATTGATGTCTAGCTAACGCACAATATCATGGAAAGCATAATCACCCCATATGATCTTAATATCGATCCAAAACTTTTGAGTGGTACTTCCATCCATAAGGACTTTTGAGACATCCAACAGACTTGCCCTAGATACAGGCCATTTGTATGATGCAAATAAAAGAATATCTGCACAGCTGAAATTCATTTTATACGACTTTCCAGGATGGATTGATTCTTTTTGGACAGCTACAATTTCCAAAGCGTCAAGTTCCTGATCAAACACCTGACAAATGTCCATAACTACAGATTCATGAATTTTTTGCCACAAGTGAGCTCGGAATATCTGGATGAGTGAGATCTTCAGAGTTGGAATTTTGCCGTGCATAAAAATACCAGTTAGATCAAGTTGTACTTGGAAACCAACATAGACATTAGCGCGATTGATAGTTGGAGACCACCATAATGTAAAGCGTTGATTAGGTATTTGATTCAACCCAGATCGCTGAGCGTTAGTCAACTTCTTGTACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG-ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCGATAATAAGTCATTAAACCAATTAAAGCGGTATTCCATTTGTTCACGATTTTGGTGAAAGTTGTCGATCCGGAGGCCATTAAAATTTGTCTAACTCTGTTATGGAATCGTTGCATTGAT]
[+] EMBL CD180858 [GGGTGCTGTTCTGCGTACGCCGGTGATAATCAGGAATTGATGTCTAGCTAACGCACAATATCATGGAAAGCATAATCACCCCATATGATCTTAATATCGATCCAAAACTTTTGAGTGGTACTTCCATCCATAAGGACTTTTGAGACATCCAACAGACTTGCCCTAGATACAGGCCATTTGTATGATGCAAATAAAAGAATATCTGCACAGCTGAAATTCATTTTATACGACTTTCCAGGATGGATTGATTCTTTTTGGACAGCTACAATTTCCAAAGCGTCAAGTTCCTGATCAAACACCTGACAAATGTCCATAACTACAGATTCATGAATTTT ]
[+] EMBL CD178996 [ GGACAGTTTCAATTTCCAAAGCGTCAAGTTCCTGATCAAACACCTGACAAATGTCCATAACTACAGATTCATGAATTTTTTGCCACAAGTGAGCTCGGAATATCTGGATGAGTGAGATCTTCAGAGTTGGAATTTTGCCGTGCATAAAAATACCAGTTAGATCAAGTTGTACTTGGAAACCAACATAGACATTAGCGCGATTGATAGTTGGAGACCACCATAATGTAAAGCGTTGATTAGGTATTTGATTCAACCCAGATCGCTGAGCGTTAGTCAACTTCTTGTACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAA ]
[-] EMBL CD185954 [ ccTCAGAGTTGGAATTTTGCCGTGCATAAAAATACCAGTTAGATCAAGTTGTACTTGGAAACCAACATAGACATTAGCGCGATTGATAGTTGGAGACCACCATAATGTAAAGCGTCGATTAGGTATTTGATTCAACCCAGATCGCTGAGCGTTAGTCAACTTCTTGTACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGCCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAA ]
[+] EMBL CD161702 [ ACTTCATTGATTCTTCAAAACCACTGGCTTTCTCCCAGAAAAGACCTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACCACCTAGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGNTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGA ]
[+] EMBL CD064326 [ AAACACTGGC TTCTCCCAGAAAAGA CTTCCCATGTAGGGAAATAAGTTCCTTTAAACAAGGTGTGCTCCAAAATACCTTCAACACC ]
[+] EMBL CD123286 [ AGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG ATCCCAACTGTCTTCTAAATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATTGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTCTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGT ]
[+] EMBL CD123305 [ AGAGCCTGGATCATATCCGTACGATAGTTGTTCAAATTCCATAACTTTCCATCGTGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTTACCCGAGGAATACCGCG ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAGCCACCAAGTTCTTTCGGTGTGT ]
[-] EMBL CD195077 [ TGTCTTTGATGTGTCCACCAAAATGGATTTTGCTTAAGAACTTGATATTGTTTGAACTCAGTTCGTACACGCCAACCCTTATCGTAAGCCAGTGTATGTCTGTCTTTTTGGAAAAGAGTATTAATCCGAGGAATACCGCG ATCCCAACTGTCTTCTAGATCTTCCAACGTTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTTAACGCATATTC ]
[+] EMBL CD125647 [ TTAATCCGAGGAATACCGCGTATCCC ACTGTCTTCTAGATCTTCCAACGCTAAACGTCTATTTTGAGCATTTGCTTCTTGTCGTTTT ]
[-] EMBL CD190337 [ CGCATATTCAGCCCAAACACTCTGGGAATCGCGAAACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCGATAATAAGTCATTAAACCAATTAAAGCGGTATTCCATTTGTTCACGATTTTGGTGAAAGTTGTCGATCCGGAGGCCATTAAAATTTGTCTAACTCTGTTATG ]
[+] EMBL CD122861 [ ATATTCAGCCCAAACACTCTGGGAATCCCGAGACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCG ]
[+] EMBL CD122972 [ ATATTCAGCCCAAACACTCTGGGAATCCCGAGACTCCGTCTCCCATGATAAGATGTAAGAGAACAAATTTGGAATAACCTGGTCCTCGTCATGACTCATGCCTGAACGAAAGTGAGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTTCGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCG ]
[+] EMBL CD188870 [ AGTAATACCAACGTCAGTTTGTTTTGACCACCGTAAATCAGACTGTGGAATAAGAACATGACCCATACTGAGCATACCTAAACCACCAAGTTCTTACGGTGTGTAAAAGACCACTGGAGGGAAACGAGCAGGCATTTTTGAGTTTAATCCAATTTTGATACGTGTTTGTATTTTGTTCTCGCACTTCACCAACAGATCCAATAATGCGACAGTGCTTACTGCTGCCTCGCGATAATAAGTCATTAAACCAATTAAAGCGGTATTCCATTTGTTCACGATTTTGGTGAAAGTTGTCGATCCGGAGGCCATTAAAATTTGTCTAACTCTGTTATGGAATCGTTGCATTGAT]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||