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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10113#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1302 fasta sequence
[TCCCAGCCAANAATTTTGCACGAGGAGCTTTTTATTCTGCTTTGAGTAGATATACAATCTATCCAAACGTGATTAGATACTTTAAAAGTGTACACTTGTTACTCTCTCTCTCTCTCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAATAATAGTCAAGTATGTAATTTATTTTCTCC-ACACGTGTAGACATGTTCATTGGATTATTTTCACTATTTCTTTACCATACACAAATTAAACCTTCTCTTTTTACAACTTTTTTTCATATTTTTATTTTGAACTAACTCTGCTTATACGTACTATTCTCTACCACTACTACTACTACTGGTAGTAGTAGTAGTACCATGCATATATCATAAAAAAGTTTCTGTTTTCTAAAATAAATATTTTATGAATAGTAATATATAAATTACTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTTTTTCTTTTTGGATGAATGAACAATTTTAGCTTTCAGGTTATCGGTTACCTCTTATTTGATTCGTATCTAAAATACAATTAATTTTTTTCTTTATAAAAAAAAACATAC-TATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCA-TTTGATTTTTCTAAT-GCATCATTTTGTTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGTATGGATGTATGTATGTATTTTTGATTAAAGACTCTCTCTCTCTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATATGTCANAGAGGCTNTCTTTCCTGCTTTATCGTGTAGTGATTATGAAGGGGAGGATGNAGAAAGTATCGGGGNATTGGTATCATTNNTTGTGNCTGNGCTGNGACCANACGAGAGTTTTAGTGAATTATGCCCGTTTTTTAAACCACTCCTTATTCCTAATGCGCCGTTAATGGTGTTGGCTTGCTCAAACATAAAGTAACTTTTGTGTTGGCCCAGGAAAATGGTTTTAACGGCCCCATTTTAGGGGAGGAAAAGGGGTGCCAAANNNNNNAAAACGGTAAATTTGCCCCTTTTCACCAAAAAAGGAAAATGTCTCCTTTTAAATTGGGGGGGGGAGGGGNAACTTGGTTTTTCGCCCACAAATGGGGGATTTTTTTAAA]
[+] EMBL CD079829 [TCCCAGCCAANAATTTTGCACGAGGAGCTTTTTATTCTGCTTTGAGTAGATATACAATCTATCCAAACGTGATTAGATACTTTAAAAGTGTACACTTGTTACTCTCTCTCTCTCTCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAATAATAGTCAAGTATGTAATTTATTTTCTCCAACACGTGTAGACATGTTCATTGGATTATTTTCACTATTTCTTTACCATACACAAATTAAACCTTCTCTTTTTACAACTTTTTTTCATATTTTTATTTTGAACTAACTCTGCTTATACGTACTATTCTCTACCACTACTACTACTACTGGTAGTAGTAGTAGTACCATGCATATATCATAAAAAAGTTTCTGTTTTCTAAAATAAATATTTTATGAATAGTAATATATAAATTACTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTTTTTCTTTTTGGATGAATGAACAATTTTAGCTTTCAGGTTATCGGTTACCTCTTATTTGATTCGTATCTAAAATACAATTAATTTTTTTCTTTATAAAAAAAAACATAC TATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCACTTTGA TTTTCTAAT GCATC ]
[+] EMBL CD080023 [ ATTTTCTCC ACACGTGTAGACATGTTCATTGGATTATTTTCACTATTTCTTTACCATACACAAATTAAACCTTCTCTTTTTACAACTTTTTTTCATATTTTTATTTTGAACTAACTCTGCTTATACGTACTATTCTCTACCACTACTACTACTACTGGTAGTAGTAGTAGTACCATGCATATATCATAAAAAAGTTTCTGTTTTCTAAAATAAATATTTTATGAATAGTAATATATAAATTACTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTTTTTCTTTTTGGATGAATGAACAATTTTAGCTTTCAGGTTATCGGTTACCTCTTATTTGATTCGTATCTAAAATACAATTAATTTTTTTCTTTATAAAAAAAAACATACNTATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCA TTTGATTTTTCTAATGGCATCATTTTGTTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGgna ]
[+] EMBL CD081855 [ aggCTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTTTTTCTTTTTGGATGAATGAACAATTTTAGCTTTCAGGTTATCGGTTACCTCTTATTTGATTCGTATCTAAAATACAATTAATTTTTTTCTTTATAAAAAAAAACATAC TATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCA TTTGATTTTTCTAAT GCATCATTTTGTTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGTATGGATGTATGTATGTATTTTTGATTAAAGACTCTCTCTCTCTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATATGTCANAGAGGCTNTCTTTCCTGCTTTATCGTGTAGTGATTATGAAGGGGAGGATGNAGAAAGTATCGGGGNATTGGTATCATTNNTTGTGNCTGNGCTGNGACCANACGAGAGTTTTAGTGAATTATGCCCGTTTTTTAAACCACTCCTTATTCCTAATGCGCCGTTAATGGTGTTGGCTTGCTCAAACATAAAGTAACTTTTGTGTTGGCCCAGGAAAATGGTTTTAACGGCCCCATTTTAGGGGAGGAAAAGGGGTGCCAAANNNNNNAAAACGGTAAATTTGCCCCTTTTCACCAAAAAAGGAAAATGTCTCCTTTTAAATTGGGGGGGGGAGGGGNAACTTGGTTTTTCGCCCACAAATGGGGGATTTTTTTAAA]
[+] EMBL CD202015 [ CATCATCACTCTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTTTTTCTTTTTGGATGAATGAACAATTTTAGCTTTCAGGTTATCGGTTACCTCTTATTTGATTCGTATCTAAAATACAATTAATTTTTTTCTTTAT AAAAAAAACATAC TATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCA TTTGATTTTTCTAAT GCATCATTTTGTTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGTATGGATGTATGTATGTATTTTTGATTAAAGACTCTCTCTCTCTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTAT ]
[+] EMBL CD077394 [ TATCGGTTACCTCTTA TTGATTCGTATCTAAAATACAATTAATTATTTTCTTTATAAAAAAAAACATAC TATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCA TTTGATTTTTCTAAT GCATCATTTAGTTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGTATGGATGTATGTATGTATTTTTGATTAAAGACTCTCTCTCTCTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATATGTCAAAGAGGCTTTCTTTCCTGC TTATCGTGTAag ]
consensusID : consensus_10113#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1113 fasta sequence
[GAGAGAGAGAGAGAGTAACAAGTGTACACTTTTAAAGTATCTAATCACGTTTGGATAGATTGTATATCTACTCAAAGCAGAATAAAAAACTGAGACGTTAAGCCATAATGAATTAGTTATTTCAACGCTAAAAATTTGATTATTGGTTAGGTTAACTAGAAGAGTCAATCAATCTACTGATGTACTGGAGAGTAGTATGCCATTCGTAATCTTTCAAAATATATATACTCTCTCTGTTTGTTATGTGTATATGCGTGTTTCAAGGGGCAGAAGTAAGAAGTAAACAATTAGCTTCTTACATTCGATCATTTTGTATTTATATGAATAATTTTTGTTGACCATTAATCAATTTGACCGGGTTGTAAGAATAATGTGGTAGACACAAAAAGAAATCATATATGTTGGTAGTATGAACAACAATATAACAACATACATAATATTTCAATGAAGTAGTTCATGGAATTAAAAGCGAAACAAAGAAAAAACCATCCAACAAGACAAGTAAAAATGAAAATCTGACTAAAATGATGTCAGAAAAAGAAACATGACAAAAATTAACTCACTAATTAACTTAATTTAACAACACTGAATTAGACAGGAAACAAATAGCGTATGTATTATGTAATCTTCGAATAAAATGCCACTTTCTATATATTCAATTTGTTAATGCCATTTGCATGCATTTATTACTATGGAAGGAGGAAGTTTATTAGAAAATGGTTTTCTTTTGTTATTTGTAAATGTGTAAAAGGAAATGGACAAATTCTTATGATATTCATTAGTAGAAACATTTGACATTATCACCACTAATAGTGATGGTAACGACGACGATAGTAGATGGTGATGACGAAGAACAAGAGAGTCAAACAGTTGGTTTCATAGAGATAATTGGTACACACACATATGTATGATCTATAACTAGGATTATTTTTCAACAGTAATGGATGATGAGTGGATCAACTTCTGGTTGTAATTGAATCTTCTGATGTGGCTGAACTTTGTTGACGATCAATATATAGTTTCAAAAGGCGTTTTTTGCCAGCGTTTAATTCAGTTAAATAACTCCAGATATCATCACCAAGTTTCATAGCTATTGCAACTAGACAAAATACA]
[+] EMBL CD069062 [GAGAGAGAGAGAGAGTAACAAGTGTACACTTTTAAAGTATCTAATCACGTTTGGATAGATTGTATATCTACTCAAAGCAGAATAAAAAACTGAGACGTTAAGCCATAATGAATTAGTTATTTCAACGCTAAAAATTTGATTATTGGTTAGGTTAACTAGAAGAGTCAATCAATCTACTGATGTACTGGAGAGTAGTATGCCATTCGTAATCTTTCAAAATATATATACTCTCTCTGTTTGTTATGTGTATATGCGTGTTTCAAGGGGCAGAAGTAAGAAGTAAACAATTAGCTTCTTACATTCGATCATTTTGTATTTATATGAATCATTTTTGTTGACCATTAATCAATTTGACCGGGTTGTAAGAATCATGTGGTAGACACAAAAAGAACTCATATATGTTGGTAGTATGAACAACAATATAACAATATACATAATATTTCAATGACGTAGTTCATGGAATTAAAAGCGAAACAAAGAAAAAACCAT ]
[+] EMBL CD069068 [ AGAGAGAGAGAGAGTAACAAGTGTACACTTTTAAAGTATCTAATCACGTTTGGATAGATTGTATATCTACTCAAAGCAGAATAAAAAACTGAGACGTTAAGCCATAATGAATTAGTTATTTCAACGCTAAAAATTTGATTATTGGTTAGGTTAACTAGAAGAGTCAATCAATCTACTGATGTACTGGAGAGTAGTATGCCATTCGTAATCTTTCAAAATATATATACTCTCTCTGTTTGTTATGTGTATATGCGTGTTTCAAGGGGCAGAAGTAAGAAGTAAACAATTAGCTTCTTACATTCGATCATTGTGTATATATATGAATAATTTGTGTAGACCATTAATCAATTTGACCGGGTTGTAAGAATAATGTGGTAGACACAAAAAGAAATCATATATGTTGGTAGTATGAACAACAATATAACAACATACATAATATTTCAATGAAGTAGTTCATGGAATTAAGAGCGACACAAAGAAAAAACCAT ]
[-] EMBL AW017247 [ TAATGAATTAGTTATTTCAACGCTAAAAATTTGATTATTGGTTAGGTTAACTAGAAGAGTCAATCAATCTACTGATGTACTGGAGAGTAGTATGCCATTCGTAATCTTTCAAAATATATATACTCTCTCTGTTTGTTATGTGTATGTGCGTGTTTCAAGGGGCAGAAGTAAGAAGTAAACAATTAGCTTCTTACATTCGATCATTTTGTATTTATATGAATAATTTTTGTTGACCATTAATCAATTTGACCGGGTTGTAAGAATAATGTGGTAGACACAAAAAGAAATCATATATGTTGGTAGTATGAACAACAATATAACAACATACACAATATTTCAATGAAGTAGTTCATGGAATTAAAACCGAAACAAAGAAAAAACCATCCAACAAGACAAGTAAAAATGAAAATCTGACTAAAATGATGTCAGAAAAAGAAACATGACAAAAATTAACTCACTAATTAACTTAATTTAACAACACTGAATTAGACAGGAAACAAATAGCGTATGTATTATGTAATCTTCGAATAAAATGCCACTTTCTATATATTCAATTTGTTAATG ]
[-] EMBL AI977640 [ AAAGAAACATGACAAAATTNAACTCACTAATTAACTTAATTTAACAACACTGAATTAGACAGGAAACAAATAGCGTATGTATTATGTAATCTTCGAATAAAATGCCACTTTCTATATATTCAATTTGTTAATGCCATTTGCATGCATTTATTACTATGGAAGGAGGAAGTTTATTAGAAAATGGTTTTCTTTTGTTATTTGTAAATGTGTAAAAGGAAATGGACAAATTCTTATGATATTCATTAGTAGAAACATTTGACATTATCACCACTAATAGTGATGGTAACGACGACGATAGTAGATGGTGATGACGAAGAACAAGAGAGTCAAACAGTTGGTTTCATAGAGATAATTGGTACACACACATATGTATGATCTATAACTAGGATTATTTTTCAACAGTAATGGATGATGAGTGGATCAACTTCTGGTTGTAATTGAATCTTCTGATGTGGCTGAACTTTGTTGACGATCAATATATAGTTTCAAAAGGCGTTTTTTGCCAGCGTTTAATTCAGTTAAATAACTCCAGATATCATCACCAAGTTTCATAGCTATTGCAACTAGACAAAATACA]
consensusID : consensus_10113#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 617 fasta sequence
[TGAAAGATTACGAATGGCATACTACTCTCCAGTACATCAGACCTAACCAATAATCAAATTTTTAGCGTTGAAATAACTAATTCATTATGGCTTAACGTCTCAGTTTTTTATTCTGCTTTGAGTAGATATACAATCTATCCAAACGTGATTAGATACTTTAAAAGTGNNNNNNNNNNNNNNNNNNNNNNNNCTCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAATAATAGTCAAGTATGTAATTTATTTTCTCCAACACGTGTAGACATGTTCATTGGATTATTTTCACTATTTCTTTATTTACAACTTTTTTTCATATTTTTATTTTGAACTAACTCTGCTTATACGTACTATTCTCTACCACTACTACTACTACTGGTAGTAGTAGTAGTACCATGCATATATCATAAAAAAGTTTCTGTTTTCTAAAATAAATATTTNNNNNNNNNNNNNNNNTAAATTACTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTNTTTCTTTNTGGATGAATGAANCATTT]
[+] EMBL CD080988 [TGAAAGATTACGAATGGCATACTACTCTCCAGTACATCAGACCTAACCAATAATCAAATTTTTAGCGTTGAAATAACTAATTCATTATGGCTTAACGTCTCAGTTTTTTATTCTGCTTTGAGTAGATATACAATCTATCCAAACGTGATTAGATACTTTAAAAGTGNNNNNNNNNNNNNNNNNNNNNNNNCTCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAATAATAGTCAAGTATGTAATTTATTTTCTCCAACACGTGTAGACATGTTCATTGGATTATTTTCACTATTTCTTTATTTACAACTTTTTTTCATATTTTTATTTTGAACTAACTCTGCTTATACGTACTATTCTCTACCACTACTACTACTACTGGTAGTAGTAGTAGTACCATGCATATATCATAAAAAAGTTTCTGTTTTCTAAAATAAATATTTNNNNNNNNNNNNNNNNTAAATTACTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTNTTTCTTTNTGGATGAATGAANCATTT]
consensusID : consensus_10113#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 578 fasta sequence
[TGTATTTTTGATTAAAGACTCTCTCTCTTTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATATGTCAAAGAGGCTTTCTTTCCTGCTTATCGTGTAAGTGATTATGAAGGGAAGGATGAGAAAAGTATCGTGGTATTGTTATCATTTTTGTTGTCTGTGCTGTGAACGAGACAGAGAGTATTAGTGAAATAATGCACGTTTTTTTAGACCACTACATTCATCCATATATGCGCCGTTATATGTTGTTGTGCTTGCTTCGAGCAATAAGAGTAGACTATTGTGTGTGTGTGCAAGGGAGATTGTGTTTTTATACTGACTACTATTTTATGTTGTATGGATAAATGTGTATGTACAGAAACTGTTTTTCACATTTTGCTCTCCCTTTTTCTCAGCTTCTAGAGAGTTTGTTTACATTGTTTCTATCCTCTTCTTTAAACATTCTGTGTACGGTTTAATCATTGGTATTTCAGTTGACCATAAATAATTTGTGATAATTATTATTATTAATAATATT]
[-] EMBL CD075570 [TGTATTTTTGATTAAAGACTCTCTCTCTTTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATATGTCAAAGAGGCTTTCTTTCCTGCTTATCGTGTAAGTGATTATGAAGGGAAGGATGAGAAAAGTATCGTGGTATTGTTATCATTTTTGTTGTCTGTGCTGTGAACGAGACAGAGAGTATTAGTGAAATAATGCACGTTTTTTTAGACCACTACATTCATCCATATATGCGCCGTTATATGTTGTTGTGCTTGCTTCGAGCAATAAGAGTAGACTATTGTGTGTGTGTGCAAGGGAGATTGTGTTTTTATACTGACTACTATTTTATGTTGTATGGATAAATGTGTATGTACAGAAACTGTTTTTCACATTTTGCTCTCCCTTTTTCTCAGCTTCTAGAGAGTTTGTTTACATTGTTTCTATCCTCTTCTTTAAACATTCTGTGTACGGTTTAATCATTGGTATTTCAGTTGACCATAAATAATTTGTGATAATTATTATTATTAATAATATT]
consensusID : consensus_10113#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence
[CATGTTTTGATGCTTATATCAAATGTATATGTCAAAAAGGCTTTTTTTCCTGCTTATCGGGTAAGTGATTATGAAGGGAAGGATGAGAAAAGGATCGGGGGATTGTTATCATTTTTGTTGTCTGGGCTGTGAACGAGCCAAAAAGTATTAGTGAAATAATGCCCGTTTTTTTAGACCCCTCCATTCATCCATATATGCCCCGTTATATGTTGTTGGGCTTGCTTCGAGCAATAAAAGTAGACTATTGTGTGTGTGTGCAAGGGAAATTGTGTTTTTATACTGACTACTATTTTATGTTGTATGGATAAATGGGTATGTCCAAAAACTGTTTTTCCCATTTTGCTTTCCCTTTTTTTCAGCTTTTAAAAAGTTTGTTTACATTGTTTTTATCCTTTTCTTTAAACATTTTGGGGACGGTTTAATCATTGGTATTTCAGTTGCCCATAAAAAATTTGTGATAATTATTATTATTAATAATATT]
[-] EMBL CD074814 [CATGTTTTGATGCTTATATCAAATGTATATGTCAAAAAGGCTTTTTTTCCTGCTTATCGGGTAAGTGATTATGAAGGGAAGGATGAGAAAAGGATCGGGGGATTGTTATCATTTTTGTTGTCTGGGCTGTGAACGAGCCAAAAAGTATTAGTGAAATAATGCCCGTTTTTTTAGACCCCTCCATTCATCCATATATGCCCCGTTATATGTTGTTGGGCTTGCTTCGAGCAATAAAAGTAGACTATTGTGTGTGTGTGCAAGGGAAATTGTGTTTTTATACTGACTACTATTTTATGTTGTATGGATAAATGGGTATGTCCAAAAACTGTTTTTCCCATTTTGCTTTCCCTTTTTTTCAGCTTTTAAAAAGTTTGTTTACATTGTTTTTATCCTTTTCTTTAAACATTTTGGGGACGGTTTAATCATTGGTATTTCAGTTGCCCATAAAAAATTTGTGATAATTATTATTATTAATAATATT]
consensusID : consensus_10113#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 184 fasta sequence
[AGTATTCCTCGTGTGAGAATGTCAGAAGCTAATGGTTTACTTCTTACTTCTGCCCCTTGAAACACGCACATACACGTAACAAACAGAGAGAGTATGTATATTTTGAAAGATTACGAATGGCATACTACTCTTCAGTACATACGCACATTGATTGACTCTTTTAGGTAACCTAACCAATAATTAA]
[+] EMBL CD167048 [AGTATTCCTCGTGTGAGAATGTCAGAAGCTAATGGTTTACTTCTTACTTCTGCCCCTTGAAACACGCACATACACGTAACAAACAGAGAGAGTATGTATATTTTGAAAGATTACGAATGGCATACTACTCTTCAGTACATACGCACATTGATTGACTCTTTTAGGTAACCTAACCAATAATTAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10113#0 ------------------------------------------------------------
consensus_10113#2 TGAAAGATTACGAATGGCATACTACTCTCCAGTACATCAGACCTAACCAATAATCAAATT 60
consensus_10113#3 --------------------------------------------------------TGTA 4
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 ----------------------------------------------GAGAGAGAGAGAGA 14
consensus_10113#0 ---------------TCCCAGCCAANAATTTTGCACGAGG--AGCTTTTTATTCTGCTTT 43
consensus_10113#2 TTTAGCGTTGAAATAACTAATTCATTATGGCTTAACGTCTC-AGTTTTTTATTCTGCTTT 119
consensus_10113#3 TTTTTGATTAAAGACTCTCTCTCTTTACCCCTCCACTTTTTTTGACATTCATCTAGCTTT 64
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 GTAACAAGTGTACACTTTTAAAGTATCTAATCACGTTTGGATAGATTGTATATCTACTCA 74
consensus_10113#0 GAGTAGATATACAATCTAT-CCAAACGTGATTAGATACTTTAAAAGT-GTACACTTGTTA 101
consensus_10113#2 GAGTAGATATACAATCTAT-CCAAACGTGATTAGATACTTTAAAAGT-GNNNNNNNNNNN 177
consensus_10113#3 TTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTA 124
consensus_10113#4 ---------------------------------CATGTTTTGATGCTTATATCAAATGTA 27
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 AAGCAGAATAAAAAACTGAGACGTTAAGCCATAATGAATTAGTTATTTCAACGCTAAAAA 134
consensus_10113#0 CTCTCTCTCTCTC-TCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAA 160
consensus_10113#2 NNNNNNNNNNNNNCTCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAA 237
consensus_10113#3 TATGTCAAAGAGGCTTTCTTTCCTGCTTATCGTGTAAGTGATTATGA------AGGGAAG 178
consensus_10113#4 TATGTCAAAAAGGCTTTTTTTCCTGCTTATCGGGTAAGTGATTATGA------AGGGAAG 81
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 TTTGATTATTGGTTAGGTTAACTAGAAGAGTCAATCAATCTACTGATGTACTGGAGAGTA 194
consensus_10113#0 TAATAGTCAAGTATGTAATTTATTTTCTCCA-CACGTGTAGACATGTTCATTGGATTATT 219
consensus_10113#2 TAATAGTCAAGTATGTAATTTATTTTCTCCAACACGTGTAGACATGTTCATTGGATTATT 297
consensus_10113#3 GATGAGAAAAGTAT-CGTGGTATTGTTATCA-TTTTTGTTGTC-TGTGCTGTGAACGAGA 235
consensus_10113#4 GATGAGAAAAGGAT-CGGGGGATTGTTATCA-TTTTTGTTGTC-TGGGCTGTGAACGAGC 138
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 GTATGCCATTCGTAATCTTTCAAAATATATATACTCTCTCTGTTTGTTATGTGTATATGC 254
consensus_10113#0 TTCACTATTTCTTTACCATACACAAATTAAACCTTCTCTTTTTACAACTTTTTTTCATAT 279
consensus_10113#2 TTCACTATTTCTTTA-------------------------TTTACAACTTTTTTTCATAT 332
consensus_10113#3 CAGAGAGTATTAGTG------------------------------AAATAATGCACGTTT 265
consensus_10113#4 CAAAAAGTATTAGTG------------------------------AAATAATGCCCGTTT 168
consensus_10113#5 ----------------------------------------------AGTATTCCTCGTGT 14
consensus_10113#1 GTGTTTCAAGGGGCAGAAGTAAGAAGTAAACAATTAGCTTCTTACATTCGATCATTTTGT 314
* * *
consensus_10113#0 TTTTATTTTGAACTAACTCTGC--TTA-TACGTACTATTCTCTA-CCACTACTACTAC-T 334
consensus_10113#2 TTTTATTTTGAACTAACTCTGC--TTA-TACGTACTATTCTCTA-CCACTACTACTAC-T 387
consensus_10113#3 TTTTAGACCACTACATTCATCC--ATA-TATGCGCCGTTATATG-TTGTTGTGCTTGC-T 320
consensus_10113#4 TTTTAGACCCCTCCATTCATCC--ATA-TATGCCCCGTTATATG-TTGTTGGGCTTGC-T 223
consensus_10113#5 GAGAATGTCAGAAGCTAATGGT--TTACTTCTTACTTCTGCCCC-TTGAAACACGCACAT 71
consensus_10113#1 ATTTATATGAATAATTTTTGTTGACCATTAATCAATTTGACCGGGTTGTAAGAATAATGT 374
* * * *
consensus_10113#0 ACTGGTAGTAGTAGTAG--TACCATGCATATATCATAAAAAAGTTTCTG-TTTTCTAAAA 391
consensus_10113#2 ACTGGTAGTAGTAGTAG--TACCATGCATATATCATAAAAAAGTTTCTG-TTTTCTAAAA 444
consensus_10113#3 TCGAGCAATAAGAGTAGACTATTGTGTGTGTGT-GCAAGGGAGATTGTG-TTTT-TATAC 377
consensus_10113#4 TCGAGCAATAAAAGTAGACTATTGTGTGTGTGT-GCAAGGGAAATTGTG-TTTT-TATAC 280
consensus_10113#5 ACACGTAACAAACAGAG---AGAGTATGTATAT--TTTGAAAGATTACG-AATGGCATAC 125
consensus_10113#1 GGTAGACACAAAAAGAAA-TCATATATGTTGGTAGTATGAACAACAATATAACAACATAC 433
* * * * * * * *
consensus_10113#0 -TAAATATTTTATGAATAGTAATATATAAATTACTAACTTTTACT-TCCTCTCCCCTTAT 449
consensus_10113#2 -TAAATATTTNNNNNNNNNNNNNNNNTAAATTACTAACTTTTACT-TCCTCTCCCCTTAT 502
consensus_10113#3 -TGACTACTATTTTATGTTGTATGGATAAATGTGTATGTACAGAA-ACTGTTTTTCACAT 435
consensus_10113#4 -TGACTACTATTTTATGTTGTATGGATAAATGGGTATGTCCAAAA-ACTGTTTTTCCCAT 338
consensus_10113#5 -T-ACTCTTCAGTACATACGCACAT-TGATTGACTCTTTTAGGTA-ACCTAACCAATAAT 181
consensus_10113#1 ATAATATTTCAATGAAGTAGTTCATGGAATTAAAAGCGAAACAAAGAAAAAACCATCCAA 493
* * * * * *
consensus_10113#0 TATTATCATCATCATCATCACTTTTTTTA---TTACAATACAATAATCCAATAGTGGTGG 506
consensus_10113#2 TATTATCATCATCATCATCACTTTTTTTA---TTACAATACAATAATCCAATAGTGGTGG 559
consensus_10113#3 TTTGCTCTCCCTTTTTCTCAGCTTCTAGAGAGTTTGTTTACATTGTTTCTATCCTCTT-- 493
consensus_10113#4 TTTGCTTTCCCTTTTTTTCAGCTTTTAAAAAGTTTGTTTACATTGTTTTTATCCTTTT-- 396
consensus_10113#5 TAA--------------------------------------------------------- 184
consensus_10113#1 CAAGACAAGTAAAAATGAAAATCTGACTAAAATGATGTCAGAAAAAGAAACATGACAAAA 553
consensus_10113#0 CTTGAACCAACACCTTCAGTATC-TTTACTCTTTTTCTTTTTGGATGA--ATGAACAATT 563
consensus_10113#2 CTTGAACCAACACCTTCAGTATC-TTTACTCTNTTTCTTTNTGGATGA--ATGAANCATT 616
consensus_10113#3 CTTTA---AACATTCTGTGTACGGTTTAATCATTGGTATTTCAGTTGACCATAAATAATT 550
consensus_10113#4 CTTTA---AACATTTTGGGGACGGTTTAATCATTGGTATTTCAGTTGCCCATAAAAAATT 453
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 ATTAACTCACTAATTAACTTAATTTAACAACACTGAATTAGACAGGAAACAAATAGCGTA 613
consensus_10113#0 TTAGCTTTCAGGTTATCGGTTACC-TCTTATTTGATTCGTATCTAAAATACAATTAATTT 622
consensus_10113#2 T----------------------------------------------------------- 617
consensus_10113#3 TGTGATAATTATTATTATTAATAA-TATT------------------------------- 578
consensus_10113#4 TGTGATAATTATTATTATTAATAA-TATT------------------------------- 481
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 TGTATTATGTAATCTTCGAATAAAATGCCACTTTCTATATATTCAATTTGTTAATGCCAT 673
consensus_10113#0 TTTTCTTTATAAAAAAAAACATACTATTCGAGGTCACAAAAAAACTGCGTTACTCCATCC 682
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 TTGCATGCATTTATTACTATGGAAGGAGGAAGTTTATTAGAAAATGGTTTTCTTTTGTTA 733
consensus_10113#0 TTTAGTTACATATACAGACATAGTTTCTATGTCATTTGATTTTTCTAATGCATCATTTTG 742
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 TTTGTAAATGTGTAAAAGGAAATGGACAAATTCTTATGATATTCATTAGTAGAAACATTT 793
consensus_10113#0 TTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGTATGGATGTATGTATGTATT 802
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 GACATTATCACCACTAATAGTGATGGTAACGACGACGATAGTAGATGGTGATGACGAAGA 853
consensus_10113#0 TTTGATTAAAGACTCTCTCTCTCTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTT 862
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 ACAAGAGAGTCAAACAGTTGGTTTCATAGAGATAATTGGTACACACACATATGTATGATC 913
consensus_10113#0 GTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATA 922
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 TATAACTAGGATTATTTTTCAACAGTAATGGATGATGAGTGGATCAACTTCTGGTTGTAA 973
consensus_10113#0 TGTCANAGAGGCTNTCTTTCCTGCTTTATCGTGTAGTGATTATGAAGGGGAGGATGNAGA 982
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 TTGAATCTTCTGATGTGGCTGAACTTTGTTGACGATCAATATATAGTTTCAAAAGGCGTT 1033
consensus_10113#0 AAGTATCGGGGNATTGGTATCATTNNTTGTGNCTGNGCTGNGACCANACGAGAGTTTTAG 1042
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 TTTTGCCAGCGTTTAATTCAGTTAAATAACTCCAGATATCATCACCAAGTTTCATAGCTA 1093
consensus_10113#0 TGAATTATGCCCGTTTTTTAAACCACTCCTTATTCCTAATGCGCCGTTAATGGTGTTGGC 1102
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 TTGCAACTAGACAAAATACA---------------------------------------- 1113
consensus_10113#0 TTGCTCAAACATAAAGTAACTTTTGTGTTGGCCCAGGAAAATGGTTTTAACGGCCCCATT 1162
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 ------------------------------------------------------------
consensus_10113#0 TTAGGGGAGGAAAAGGGGTGCCAAANNNNNNAAAACGGTAAATTTGCCCCTTTTCACCAA 1222
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 ------------------------------------------------------------
consensus_10113#0 AAAAGGAAAATGTCTCCTTTTAAATTGGGGGGGGGAGGGGNAACTTGGTTTTTCGCCCAC 1282
consensus_10113#2 ------------------------------------------------------------
consensus_10113#3 ------------------------------------------------------------
consensus_10113#4 ------------------------------------------------------------
consensus_10113#5 ------------------------------------------------------------
consensus_10113#1 ------------------------------------------------------------
consensus_10113#0 AAATGGGGGATTTTTTTAAA 1302
consensus_10113#2 --------------------
consensus_10113#3 --------------------
consensus_10113#4 --------------------
consensus_10113#5 --------------------
consensus_10113#1 --------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||