These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10113#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1302 fasta sequence [TCCCAGCCAANAATTTTGCACGAGGAGCTTTTTATTCTGCTTTGAGTAGATATACAATCTATCCAAACGTGATTAGATACTTTAAAAGTGTACACTTGTTACTCTCTCTCTCTCTCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAATAATAGTCAAGTATGTAATTTATTTTCTCC-ACACGTGTAGACATGTTCATTGGATTATTTTCACTATTTCTTTACCATACACAAATTAAACCTTCTCTTTTTACAACTTTTTTTCATATTTTTATTTTGAACTAACTCTGCTTATACGTACTATTCTCTACCACTACTACTACTACTGGTAGTAGTAGTAGTACCATGCATATATCATAAAAAAGTTTCTGTTTTCTAAAATAAATATTTTATGAATAGTAATATATAAATTACTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTTTTTCTTTTTGGATGAATGAACAATTTTAGCTTTCAGGTTATCGGTTACCTCTTATTTGATTCGTATCTAAAATACAATTAATTTTTTTCTTTATAAAAAAAAACATAC-TATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCA-TTTGATTTTTCTAAT-GCATCATTTTGTTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGTATGGATGTATGTATGTATTTTTGATTAAAGACTCTCTCTCTCTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATATGTCANAGAGGCTNTCTTTCCTGCTTTATCGTGTAGTGATTATGAAGGGGAGGATGNAGAAAGTATCGGGGNATTGGTATCATTNNTTGTGNCTGNGCTGNGACCANACGAGAGTTTTAGTGAATTATGCCCGTTTTTTAAACCACTCCTTATTCCTAATGCGCCGTTAATGGTGTTGGCTTGCTCAAACATAAAGTAACTTTTGTGTTGGCCCAGGAAAATGGTTTTAACGGCCCCATTTTAGGGGAGGAAAAGGGGTGCCAAANNNNNNAAAACGGTAAATTTGCCCCTTTTCACCAAAAAAGGAAAATGTCTCCTTTTAAATTGGGGGGGGGAGGGGNAACTTGGTTTTTCGCCCACAAATGGGGGATTTTTTTAAA] [+] EMBL CD079829 [TCCCAGCCAANAATTTTGCACGAGGAGCTTTTTATTCTGCTTTGAGTAGATATACAATCTATCCAAACGTGATTAGATACTTTAAAAGTGTACACTTGTTACTCTCTCTCTCTCTCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAATAATAGTCAAGTATGTAATTTATTTTCTCCAACACGTGTAGACATGTTCATTGGATTATTTTCACTATTTCTTTACCATACACAAATTAAACCTTCTCTTTTTACAACTTTTTTTCATATTTTTATTTTGAACTAACTCTGCTTATACGTACTATTCTCTACCACTACTACTACTACTGGTAGTAGTAGTAGTACCATGCATATATCATAAAAAAGTTTCTGTTTTCTAAAATAAATATTTTATGAATAGTAATATATAAATTACTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTTTTTCTTTTTGGATGAATGAACAATTTTAGCTTTCAGGTTATCGGTTACCTCTTATTTGATTCGTATCTAAAATACAATTAATTTTTTTCTTTATAAAAAAAAACATAC TATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCACTTTGA TTTTCTAAT GCATC ] [+] EMBL CD080023 [ ATTTTCTCC ACACGTGTAGACATGTTCATTGGATTATTTTCACTATTTCTTTACCATACACAAATTAAACCTTCTCTTTTTACAACTTTTTTTCATATTTTTATTTTGAACTAACTCTGCTTATACGTACTATTCTCTACCACTACTACTACTACTGGTAGTAGTAGTAGTACCATGCATATATCATAAAAAAGTTTCTGTTTTCTAAAATAAATATTTTATGAATAGTAATATATAAATTACTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTTTTTCTTTTTGGATGAATGAACAATTTTAGCTTTCAGGTTATCGGTTACCTCTTATTTGATTCGTATCTAAAATACAATTAATTTTTTTCTTTATAAAAAAAAACATACNTATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCA TTTGATTTTTCTAATGGCATCATTTTGTTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGgna ] [+] EMBL CD081855 [ aggCTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTTTTTCTTTTTGGATGAATGAACAATTTTAGCTTTCAGGTTATCGGTTACCTCTTATTTGATTCGTATCTAAAATACAATTAATTTTTTTCTTTATAAAAAAAAACATAC TATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCA TTTGATTTTTCTAAT GCATCATTTTGTTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGTATGGATGTATGTATGTATTTTTGATTAAAGACTCTCTCTCTCTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATATGTCANAGAGGCTNTCTTTCCTGCTTTATCGTGTAGTGATTATGAAGGGGAGGATGNAGAAAGTATCGGGGNATTGGTATCATTNNTTGTGNCTGNGCTGNGACCANACGAGAGTTTTAGTGAATTATGCCCGTTTTTTAAACCACTCCTTATTCCTAATGCGCCGTTAATGGTGTTGGCTTGCTCAAACATAAAGTAACTTTTGTGTTGGCCCAGGAAAATGGTTTTAACGGCCCCATTTTAGGGGAGGAAAAGGGGTGCCAAANNNNNNAAAACGGTAAATTTGCCCCTTTTCACCAAAAAAGGAAAATGTCTCCTTTTAAATTGGGGGGGGGAGGGGNAACTTGGTTTTTCGCCCACAAATGGGGGATTTTTTTAAA] [+] EMBL CD202015 [ CATCATCACTCTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTTTTTCTTTTTGGATGAATGAACAATTTTAGCTTTCAGGTTATCGGTTACCTCTTATTTGATTCGTATCTAAAATACAATTAATTTTTTTCTTTAT AAAAAAAACATAC TATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCA TTTGATTTTTCTAAT GCATCATTTTGTTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGTATGGATGTATGTATGTATTTTTGATTAAAGACTCTCTCTCTCTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTAT ] [+] EMBL CD077394 [ TATCGGTTACCTCTTA TTGATTCGTATCTAAAATACAATTAATTATTTTCTTTATAAAAAAAAACATAC TATTCGAGGTCACAAAAAAACTGCGTTACTCCATCCTTTAGTTACATATACAGACATAGTTTCTATGTCA TTTGATTTTTCTAAT GCATCATTTAGTTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGTATGGATGTATGTATGTATTTTTGATTAAAGACTCTCTCTCTCTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATATGTCAAAGAGGCTTTCTTTCCTGC TTATCGTGTAag ] consensusID : consensus_10113#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1113 fasta sequence [GAGAGAGAGAGAGAGTAACAAGTGTACACTTTTAAAGTATCTAATCACGTTTGGATAGATTGTATATCTACTCAAAGCAGAATAAAAAACTGAGACGTTAAGCCATAATGAATTAGTTATTTCAACGCTAAAAATTTGATTATTGGTTAGGTTAACTAGAAGAGTCAATCAATCTACTGATGTACTGGAGAGTAGTATGCCATTCGTAATCTTTCAAAATATATATACTCTCTCTGTTTGTTATGTGTATATGCGTGTTTCAAGGGGCAGAAGTAAGAAGTAAACAATTAGCTTCTTACATTCGATCATTTTGTATTTATATGAATAATTTTTGTTGACCATTAATCAATTTGACCGGGTTGTAAGAATAATGTGGTAGACACAAAAAGAAATCATATATGTTGGTAGTATGAACAACAATATAACAACATACATAATATTTCAATGAAGTAGTTCATGGAATTAAAAGCGAAACAAAGAAAAAACCATCCAACAAGACAAGTAAAAATGAAAATCTGACTAAAATGATGTCAGAAAAAGAAACATGACAAAAATTAACTCACTAATTAACTTAATTTAACAACACTGAATTAGACAGGAAACAAATAGCGTATGTATTATGTAATCTTCGAATAAAATGCCACTTTCTATATATTCAATTTGTTAATGCCATTTGCATGCATTTATTACTATGGAAGGAGGAAGTTTATTAGAAAATGGTTTTCTTTTGTTATTTGTAAATGTGTAAAAGGAAATGGACAAATTCTTATGATATTCATTAGTAGAAACATTTGACATTATCACCACTAATAGTGATGGTAACGACGACGATAGTAGATGGTGATGACGAAGAACAAGAGAGTCAAACAGTTGGTTTCATAGAGATAATTGGTACACACACATATGTATGATCTATAACTAGGATTATTTTTCAACAGTAATGGATGATGAGTGGATCAACTTCTGGTTGTAATTGAATCTTCTGATGTGGCTGAACTTTGTTGACGATCAATATATAGTTTCAAAAGGCGTTTTTTGCCAGCGTTTAATTCAGTTAAATAACTCCAGATATCATCACCAAGTTTCATAGCTATTGCAACTAGACAAAATACA] [+] EMBL CD069062 [GAGAGAGAGAGAGAGTAACAAGTGTACACTTTTAAAGTATCTAATCACGTTTGGATAGATTGTATATCTACTCAAAGCAGAATAAAAAACTGAGACGTTAAGCCATAATGAATTAGTTATTTCAACGCTAAAAATTTGATTATTGGTTAGGTTAACTAGAAGAGTCAATCAATCTACTGATGTACTGGAGAGTAGTATGCCATTCGTAATCTTTCAAAATATATATACTCTCTCTGTTTGTTATGTGTATATGCGTGTTTCAAGGGGCAGAAGTAAGAAGTAAACAATTAGCTTCTTACATTCGATCATTTTGTATTTATATGAATCATTTTTGTTGACCATTAATCAATTTGACCGGGTTGTAAGAATCATGTGGTAGACACAAAAAGAACTCATATATGTTGGTAGTATGAACAACAATATAACAATATACATAATATTTCAATGACGTAGTTCATGGAATTAAAAGCGAAACAAAGAAAAAACCAT ] [+] EMBL CD069068 [ AGAGAGAGAGAGAGTAACAAGTGTACACTTTTAAAGTATCTAATCACGTTTGGATAGATTGTATATCTACTCAAAGCAGAATAAAAAACTGAGACGTTAAGCCATAATGAATTAGTTATTTCAACGCTAAAAATTTGATTATTGGTTAGGTTAACTAGAAGAGTCAATCAATCTACTGATGTACTGGAGAGTAGTATGCCATTCGTAATCTTTCAAAATATATATACTCTCTCTGTTTGTTATGTGTATATGCGTGTTTCAAGGGGCAGAAGTAAGAAGTAAACAATTAGCTTCTTACATTCGATCATTGTGTATATATATGAATAATTTGTGTAGACCATTAATCAATTTGACCGGGTTGTAAGAATAATGTGGTAGACACAAAAAGAAATCATATATGTTGGTAGTATGAACAACAATATAACAACATACATAATATTTCAATGAAGTAGTTCATGGAATTAAGAGCGACACAAAGAAAAAACCAT ] [-] EMBL AW017247 [ TAATGAATTAGTTATTTCAACGCTAAAAATTTGATTATTGGTTAGGTTAACTAGAAGAGTCAATCAATCTACTGATGTACTGGAGAGTAGTATGCCATTCGTAATCTTTCAAAATATATATACTCTCTCTGTTTGTTATGTGTATGTGCGTGTTTCAAGGGGCAGAAGTAAGAAGTAAACAATTAGCTTCTTACATTCGATCATTTTGTATTTATATGAATAATTTTTGTTGACCATTAATCAATTTGACCGGGTTGTAAGAATAATGTGGTAGACACAAAAAGAAATCATATATGTTGGTAGTATGAACAACAATATAACAACATACACAATATTTCAATGAAGTAGTTCATGGAATTAAAACCGAAACAAAGAAAAAACCATCCAACAAGACAAGTAAAAATGAAAATCTGACTAAAATGATGTCAGAAAAAGAAACATGACAAAAATTAACTCACTAATTAACTTAATTTAACAACACTGAATTAGACAGGAAACAAATAGCGTATGTATTATGTAATCTTCGAATAAAATGCCACTTTCTATATATTCAATTTGTTAATG ] [-] EMBL AI977640 [ AAAGAAACATGACAAAATTNAACTCACTAATTAACTTAATTTAACAACACTGAATTAGACAGGAAACAAATAGCGTATGTATTATGTAATCTTCGAATAAAATGCCACTTTCTATATATTCAATTTGTTAATGCCATTTGCATGCATTTATTACTATGGAAGGAGGAAGTTTATTAGAAAATGGTTTTCTTTTGTTATTTGTAAATGTGTAAAAGGAAATGGACAAATTCTTATGATATTCATTAGTAGAAACATTTGACATTATCACCACTAATAGTGATGGTAACGACGACGATAGTAGATGGTGATGACGAAGAACAAGAGAGTCAAACAGTTGGTTTCATAGAGATAATTGGTACACACACATATGTATGATCTATAACTAGGATTATTTTTCAACAGTAATGGATGATGAGTGGATCAACTTCTGGTTGTAATTGAATCTTCTGATGTGGCTGAACTTTGTTGACGATCAATATATAGTTTCAAAAGGCGTTTTTTGCCAGCGTTTAATTCAGTTAAATAACTCCAGATATCATCACCAAGTTTCATAGCTATTGCAACTAGACAAAATACA] consensusID : consensus_10113#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 617 fasta sequence [TGAAAGATTACGAATGGCATACTACTCTCCAGTACATCAGACCTAACCAATAATCAAATTTTTAGCGTTGAAATAACTAATTCATTATGGCTTAACGTCTCAGTTTTTTATTCTGCTTTGAGTAGATATACAATCTATCCAAACGTGATTAGATACTTTAAAAGTGNNNNNNNNNNNNNNNNNNNNNNNNCTCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAATAATAGTCAAGTATGTAATTTATTTTCTCCAACACGTGTAGACATGTTCATTGGATTATTTTCACTATTTCTTTATTTACAACTTTTTTTCATATTTTTATTTTGAACTAACTCTGCTTATACGTACTATTCTCTACCACTACTACTACTACTGGTAGTAGTAGTAGTACCATGCATATATCATAAAAAAGTTTCTGTTTTCTAAAATAAATATTTNNNNNNNNNNNNNNNNTAAATTACTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTNTTTCTTTNTGGATGAATGAANCATTT] [+] EMBL CD080988 [TGAAAGATTACGAATGGCATACTACTCTCCAGTACATCAGACCTAACCAATAATCAAATTTTTAGCGTTGAAATAACTAATTCATTATGGCTTAACGTCTCAGTTTTTTATTCTGCTTTGAGTAGATATACAATCTATCCAAACGTGATTAGATACTTTAAAAGTGNNNNNNNNNNNNNNNNNNNNNNNNCTCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAATAATAGTCAAGTATGTAATTTATTTTCTCCAACACGTGTAGACATGTTCATTGGATTATTTTCACTATTTCTTTATTTACAACTTTTTTTCATATTTTTATTTTGAACTAACTCTGCTTATACGTACTATTCTCTACCACTACTACTACTACTGGTAGTAGTAGTAGTACCATGCATATATCATAAAAAAGTTTCTGTTTTCTAAAATAAATATTTNNNNNNNNNNNNNNNNTAAATTACTAACTTTTACTTCCTCTCCCCTTATTATTATCATCATCATCATCACTTTTTTTATTACAATACAATAATCCAATAGTGGTGGCTTGAACCAACACCTTCAGTATCTTTACTCTNTTTCTTTNTGGATGAATGAANCATTT] consensusID : consensus_10113#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 578 fasta sequence [TGTATTTTTGATTAAAGACTCTCTCTCTTTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATATGTCAAAGAGGCTTTCTTTCCTGCTTATCGTGTAAGTGATTATGAAGGGAAGGATGAGAAAAGTATCGTGGTATTGTTATCATTTTTGTTGTCTGTGCTGTGAACGAGACAGAGAGTATTAGTGAAATAATGCACGTTTTTTTAGACCACTACATTCATCCATATATGCGCCGTTATATGTTGTTGTGCTTGCTTCGAGCAATAAGAGTAGACTATTGTGTGTGTGTGCAAGGGAGATTGTGTTTTTATACTGACTACTATTTTATGTTGTATGGATAAATGTGTATGTACAGAAACTGTTTTTCACATTTTGCTCTCCCTTTTTCTCAGCTTCTAGAGAGTTTGTTTACATTGTTTCTATCCTCTTCTTTAAACATTCTGTGTACGGTTTAATCATTGGTATTTCAGTTGACCATAAATAATTTGTGATAATTATTATTATTAATAATATT] [-] EMBL CD075570 [TGTATTTTTGATTAAAGACTCTCTCTCTTTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATATGTCAAAGAGGCTTTCTTTCCTGCTTATCGTGTAAGTGATTATGAAGGGAAGGATGAGAAAAGTATCGTGGTATTGTTATCATTTTTGTTGTCTGTGCTGTGAACGAGACAGAGAGTATTAGTGAAATAATGCACGTTTTTTTAGACCACTACATTCATCCATATATGCGCCGTTATATGTTGTTGTGCTTGCTTCGAGCAATAAGAGTAGACTATTGTGTGTGTGTGCAAGGGAGATTGTGTTTTTATACTGACTACTATTTTATGTTGTATGGATAAATGTGTATGTACAGAAACTGTTTTTCACATTTTGCTCTCCCTTTTTCTCAGCTTCTAGAGAGTTTGTTTACATTGTTTCTATCCTCTTCTTTAAACATTCTGTGTACGGTTTAATCATTGGTATTTCAGTTGACCATAAATAATTTGTGATAATTATTATTATTAATAATATT] consensusID : consensus_10113#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence [CATGTTTTGATGCTTATATCAAATGTATATGTCAAAAAGGCTTTTTTTCCTGCTTATCGGGTAAGTGATTATGAAGGGAAGGATGAGAAAAGGATCGGGGGATTGTTATCATTTTTGTTGTCTGGGCTGTGAACGAGCCAAAAAGTATTAGTGAAATAATGCCCGTTTTTTTAGACCCCTCCATTCATCCATATATGCCCCGTTATATGTTGTTGGGCTTGCTTCGAGCAATAAAAGTAGACTATTGTGTGTGTGTGCAAGGGAAATTGTGTTTTTATACTGACTACTATTTTATGTTGTATGGATAAATGGGTATGTCCAAAAACTGTTTTTCCCATTTTGCTTTCCCTTTTTTTCAGCTTTTAAAAAGTTTGTTTACATTGTTTTTATCCTTTTCTTTAAACATTTTGGGGACGGTTTAATCATTGGTATTTCAGTTGCCCATAAAAAATTTGTGATAATTATTATTATTAATAATATT] [-] EMBL CD074814 [CATGTTTTGATGCTTATATCAAATGTATATGTCAAAAAGGCTTTTTTTCCTGCTTATCGGGTAAGTGATTATGAAGGGAAGGATGAGAAAAGGATCGGGGGATTGTTATCATTTTTGTTGTCTGGGCTGTGAACGAGCCAAAAAGTATTAGTGAAATAATGCCCGTTTTTTTAGACCCCTCCATTCATCCATATATGCCCCGTTATATGTTGTTGGGCTTGCTTCGAGCAATAAAAGTAGACTATTGTGTGTGTGTGCAAGGGAAATTGTGTTTTTATACTGACTACTATTTTATGTTGTATGGATAAATGGGTATGTCCAAAAACTGTTTTTCCCATTTTGCTTTCCCTTTTTTTCAGCTTTTAAAAAGTTTGTTTACATTGTTTTTATCCTTTTCTTTAAACATTTTGGGGACGGTTTAATCATTGGTATTTCAGTTGCCCATAAAAAATTTGTGATAATTATTATTATTAATAATATT] consensusID : consensus_10113#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 184 fasta sequence [AGTATTCCTCGTGTGAGAATGTCAGAAGCTAATGGTTTACTTCTTACTTCTGCCCCTTGAAACACGCACATACACGTAACAAACAGAGAGAGTATGTATATTTTGAAAGATTACGAATGGCATACTACTCTTCAGTACATACGCACATTGATTGACTCTTTTAGGTAACCTAACCAATAATTAA] [+] EMBL CD167048 [AGTATTCCTCGTGTGAGAATGTCAGAAGCTAATGGTTTACTTCTTACTTCTGCCCCTTGAAACACGCACATACACGTAACAAACAGAGAGAGTATGTATATTTTGAAAGATTACGAATGGCATACTACTCTTCAGTACATACGCACATTGATTGACTCTTTTAGGTAACCTAACCAATAATTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10113#0 ------------------------------------------------------------ consensus_10113#2 TGAAAGATTACGAATGGCATACTACTCTCCAGTACATCAGACCTAACCAATAATCAAATT 60 consensus_10113#3 --------------------------------------------------------TGTA 4 consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 ----------------------------------------------GAGAGAGAGAGAGA 14 consensus_10113#0 ---------------TCCCAGCCAANAATTTTGCACGAGG--AGCTTTTTATTCTGCTTT 43 consensus_10113#2 TTTAGCGTTGAAATAACTAATTCATTATGGCTTAACGTCTC-AGTTTTTTATTCTGCTTT 119 consensus_10113#3 TTTTTGATTAAAGACTCTCTCTCTTTACCCCTCCACTTTTTTTGACATTCATCTAGCTTT 64 consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 GTAACAAGTGTACACTTTTAAAGTATCTAATCACGTTTGGATAGATTGTATATCTACTCA 74 consensus_10113#0 GAGTAGATATACAATCTAT-CCAAACGTGATTAGATACTTTAAAAGT-GTACACTTGTTA 101 consensus_10113#2 GAGTAGATATACAATCTAT-CCAAACGTGATTAGATACTTTAAAAGT-GNNNNNNNNNNN 177 consensus_10113#3 TTGTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTA 124 consensus_10113#4 ---------------------------------CATGTTTTGATGCTTATATCAAATGTA 27 consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 AAGCAGAATAAAAAACTGAGACGTTAAGCCATAATGAATTAGTTATTTCAACGCTAAAAA 134 consensus_10113#0 CTCTCTCTCTCTC-TCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAA 160 consensus_10113#2 NNNNNNNNNNNNNCTCTCTCTCTCGCATATCTTTCATGTGCCTCTTTTCTCCCAGAAAAA 237 consensus_10113#3 TATGTCAAAGAGGCTTTCTTTCCTGCTTATCGTGTAAGTGATTATGA------AGGGAAG 178 consensus_10113#4 TATGTCAAAAAGGCTTTTTTTCCTGCTTATCGGGTAAGTGATTATGA------AGGGAAG 81 consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 TTTGATTATTGGTTAGGTTAACTAGAAGAGTCAATCAATCTACTGATGTACTGGAGAGTA 194 consensus_10113#0 TAATAGTCAAGTATGTAATTTATTTTCTCCA-CACGTGTAGACATGTTCATTGGATTATT 219 consensus_10113#2 TAATAGTCAAGTATGTAATTTATTTTCTCCAACACGTGTAGACATGTTCATTGGATTATT 297 consensus_10113#3 GATGAGAAAAGTAT-CGTGGTATTGTTATCA-TTTTTGTTGTC-TGTGCTGTGAACGAGA 235 consensus_10113#4 GATGAGAAAAGGAT-CGGGGGATTGTTATCA-TTTTTGTTGTC-TGGGCTGTGAACGAGC 138 consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 GTATGCCATTCGTAATCTTTCAAAATATATATACTCTCTCTGTTTGTTATGTGTATATGC 254 consensus_10113#0 TTCACTATTTCTTTACCATACACAAATTAAACCTTCTCTTTTTACAACTTTTTTTCATAT 279 consensus_10113#2 TTCACTATTTCTTTA-------------------------TTTACAACTTTTTTTCATAT 332 consensus_10113#3 CAGAGAGTATTAGTG------------------------------AAATAATGCACGTTT 265 consensus_10113#4 CAAAAAGTATTAGTG------------------------------AAATAATGCCCGTTT 168 consensus_10113#5 ----------------------------------------------AGTATTCCTCGTGT 14 consensus_10113#1 GTGTTTCAAGGGGCAGAAGTAAGAAGTAAACAATTAGCTTCTTACATTCGATCATTTTGT 314 * * * consensus_10113#0 TTTTATTTTGAACTAACTCTGC--TTA-TACGTACTATTCTCTA-CCACTACTACTAC-T 334 consensus_10113#2 TTTTATTTTGAACTAACTCTGC--TTA-TACGTACTATTCTCTA-CCACTACTACTAC-T 387 consensus_10113#3 TTTTAGACCACTACATTCATCC--ATA-TATGCGCCGTTATATG-TTGTTGTGCTTGC-T 320 consensus_10113#4 TTTTAGACCCCTCCATTCATCC--ATA-TATGCCCCGTTATATG-TTGTTGGGCTTGC-T 223 consensus_10113#5 GAGAATGTCAGAAGCTAATGGT--TTACTTCTTACTTCTGCCCC-TTGAAACACGCACAT 71 consensus_10113#1 ATTTATATGAATAATTTTTGTTGACCATTAATCAATTTGACCGGGTTGTAAGAATAATGT 374 * * * * consensus_10113#0 ACTGGTAGTAGTAGTAG--TACCATGCATATATCATAAAAAAGTTTCTG-TTTTCTAAAA 391 consensus_10113#2 ACTGGTAGTAGTAGTAG--TACCATGCATATATCATAAAAAAGTTTCTG-TTTTCTAAAA 444 consensus_10113#3 TCGAGCAATAAGAGTAGACTATTGTGTGTGTGT-GCAAGGGAGATTGTG-TTTT-TATAC 377 consensus_10113#4 TCGAGCAATAAAAGTAGACTATTGTGTGTGTGT-GCAAGGGAAATTGTG-TTTT-TATAC 280 consensus_10113#5 ACACGTAACAAACAGAG---AGAGTATGTATAT--TTTGAAAGATTACG-AATGGCATAC 125 consensus_10113#1 GGTAGACACAAAAAGAAA-TCATATATGTTGGTAGTATGAACAACAATATAACAACATAC 433 * * * * * * * * consensus_10113#0 -TAAATATTTTATGAATAGTAATATATAAATTACTAACTTTTACT-TCCTCTCCCCTTAT 449 consensus_10113#2 -TAAATATTTNNNNNNNNNNNNNNNNTAAATTACTAACTTTTACT-TCCTCTCCCCTTAT 502 consensus_10113#3 -TGACTACTATTTTATGTTGTATGGATAAATGTGTATGTACAGAA-ACTGTTTTTCACAT 435 consensus_10113#4 -TGACTACTATTTTATGTTGTATGGATAAATGGGTATGTCCAAAA-ACTGTTTTTCCCAT 338 consensus_10113#5 -T-ACTCTTCAGTACATACGCACAT-TGATTGACTCTTTTAGGTA-ACCTAACCAATAAT 181 consensus_10113#1 ATAATATTTCAATGAAGTAGTTCATGGAATTAAAAGCGAAACAAAGAAAAAACCATCCAA 493 * * * * * * consensus_10113#0 TATTATCATCATCATCATCACTTTTTTTA---TTACAATACAATAATCCAATAGTGGTGG 506 consensus_10113#2 TATTATCATCATCATCATCACTTTTTTTA---TTACAATACAATAATCCAATAGTGGTGG 559 consensus_10113#3 TTTGCTCTCCCTTTTTCTCAGCTTCTAGAGAGTTTGTTTACATTGTTTCTATCCTCTT-- 493 consensus_10113#4 TTTGCTTTCCCTTTTTTTCAGCTTTTAAAAAGTTTGTTTACATTGTTTTTATCCTTTT-- 396 consensus_10113#5 TAA--------------------------------------------------------- 184 consensus_10113#1 CAAGACAAGTAAAAATGAAAATCTGACTAAAATGATGTCAGAAAAAGAAACATGACAAAA 553 consensus_10113#0 CTTGAACCAACACCTTCAGTATC-TTTACTCTTTTTCTTTTTGGATGA--ATGAACAATT 563 consensus_10113#2 CTTGAACCAACACCTTCAGTATC-TTTACTCTNTTTCTTTNTGGATGA--ATGAANCATT 616 consensus_10113#3 CTTTA---AACATTCTGTGTACGGTTTAATCATTGGTATTTCAGTTGACCATAAATAATT 550 consensus_10113#4 CTTTA---AACATTTTGGGGACGGTTTAATCATTGGTATTTCAGTTGCCCATAAAAAATT 453 consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 ATTAACTCACTAATTAACTTAATTTAACAACACTGAATTAGACAGGAAACAAATAGCGTA 613 consensus_10113#0 TTAGCTTTCAGGTTATCGGTTACC-TCTTATTTGATTCGTATCTAAAATACAATTAATTT 622 consensus_10113#2 T----------------------------------------------------------- 617 consensus_10113#3 TGTGATAATTATTATTATTAATAA-TATT------------------------------- 578 consensus_10113#4 TGTGATAATTATTATTATTAATAA-TATT------------------------------- 481 consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 TGTATTATGTAATCTTCGAATAAAATGCCACTTTCTATATATTCAATTTGTTAATGCCAT 673 consensus_10113#0 TTTTCTTTATAAAAAAAAACATACTATTCGAGGTCACAAAAAAACTGCGTTACTCCATCC 682 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 TTGCATGCATTTATTACTATGGAAGGAGGAAGTTTATTAGAAAATGGTTTTCTTTTGTTA 733 consensus_10113#0 TTTAGTTACATATACAGACATAGTTTCTATGTCATTTGATTTTTCTAATGCATCATTTTG 742 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 TTTGTAAATGTGTAAAAGGAAATGGACAAATTCTTATGATATTCATTAGTAGAAACATTT 793 consensus_10113#0 TTTGTAACGAAAGAAAACGATATAGATTTATCATTATGTGTATGGATGTATGTATGTATT 802 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 GACATTATCACCACTAATAGTGATGGTAACGACGACGATAGTAGATGGTGATGACGAAGA 853 consensus_10113#0 TTTGATTAAAGACTCTCTCTCTCTACCCCTCCACTTTTTTTGACATTCATCTAGCTTTTT 862 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 ACAAGAGAGTCAAACAGTTGGTTTCATAGAGATAATTGGTACACACACATATGTATGATC 913 consensus_10113#0 GTCCATTTGTTGTGTGTGTTCTACTCGATGCCATGTTTTGATGCTTATATCAGATGTATA 922 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 TATAACTAGGATTATTTTTCAACAGTAATGGATGATGAGTGGATCAACTTCTGGTTGTAA 973 consensus_10113#0 TGTCANAGAGGCTNTCTTTCCTGCTTTATCGTGTAGTGATTATGAAGGGGAGGATGNAGA 982 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 TTGAATCTTCTGATGTGGCTGAACTTTGTTGACGATCAATATATAGTTTCAAAAGGCGTT 1033 consensus_10113#0 AAGTATCGGGGNATTGGTATCATTNNTTGTGNCTGNGCTGNGACCANACGAGAGTTTTAG 1042 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 TTTTGCCAGCGTTTAATTCAGTTAAATAACTCCAGATATCATCACCAAGTTTCATAGCTA 1093 consensus_10113#0 TGAATTATGCCCGTTTTTTAAACCACTCCTTATTCCTAATGCGCCGTTAATGGTGTTGGC 1102 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 TTGCAACTAGACAAAATACA---------------------------------------- 1113 consensus_10113#0 TTGCTCAAACATAAAGTAACTTTTGTGTTGGCCCAGGAAAATGGTTTTAACGGCCCCATT 1162 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 ------------------------------------------------------------ consensus_10113#0 TTAGGGGAGGAAAAGGGGTGCCAAANNNNNNAAAACGGTAAATTTGCCCCTTTTCACCAA 1222 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 ------------------------------------------------------------ consensus_10113#0 AAAAGGAAAATGTCTCCTTTTAAATTGGGGGGGGGAGGGGNAACTTGGTTTTTCGCCCAC 1282 consensus_10113#2 ------------------------------------------------------------ consensus_10113#3 ------------------------------------------------------------ consensus_10113#4 ------------------------------------------------------------ consensus_10113#5 ------------------------------------------------------------ consensus_10113#1 ------------------------------------------------------------ consensus_10113#0 AAATGGGGGATTTTTTTAAA 1302 consensus_10113#2 -------------------- consensus_10113#3 -------------------- consensus_10113#4 -------------------- consensus_10113#5 -------------------- consensus_10113#1 -------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||