cluster # 10117

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Schistosoma mansoni
cluster # 10117 cluster # 10117 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10117#0 length = 1411 sequences # 5
consensus_10117#1 length = 1218 sequences # 6

consensus_10117#2 length = 598 sequences # 1
consensus_10117#3 length = 250 sequences # 1

consensusID : consensus_10117#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1411
fasta sequence

                              [CGGAGCCATTAATTCGGCACGAGGGCGAAAGCCTACCTATCTCACTACTCAGTCATATTATTATCTACCGGATTTTACTAACCGTCATCTCCGAAGTCCAGAAACAGTTCAAGCTCATGTGACGGAGCCTAGAGGTGTACCAAGGATGTCCAATTCAACAGTTCTTATTGAGGTTCCTAGCTGGCGTGTTATACCCATCCCAGGTGTCGAGAATCATGTGGATTGTTCTTGTGGAGCAAAACATTCCAAATCATGCCCCAAAAAGCACCAAGACAGAAGAAAACTAACAGATATGGATACTCTTAAATCACATAATCTCCGCGCCTTACGATCCAGCTTGCTGACTATTAACTCTGTTCATTCAAATAAAAATTATTCAACTCTAGAACTTAGGTCAAAACCCAGGTCTAGATCTTCTCAGACACATGAAGAGCATTCCCAAGTTGGAGAACCTGTCAAATCGGTTGGTGTTTTGGATGAAAACATATCAGATCCAGCATTTCTTGCTCGCCATTCACGTTTAGAAATTGAGGAAGTTCGTCACGAACGCTTATCTCGCCAGCGTACTGCAGAACAAGAACTAAAGCAACGTTTGGAAGAAAGGGATCAAGCCAGTTGGGTAAGGGAAAAGCTCTGTACACTGAGTTATCTGACATAAGAGACAACCTGGTCGTTTGGATCCACTTCTGAAGTATAGACCAGCTAGTCGGATGCCAACTCAGCTAAACTATACACTNNCAGCAGGACATCAGTTCCACGTAGACAACTCCATACCGGTGGTCGCATTTGGTTGTCGCGTGCCAGTAGCCTCACTAAAACCGTTCACAAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAACTTTTGAAGCTTTTCACATTGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATATTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCAGGTGCTTGATTCCTGTTATCTACCCTCTCAAATACAATATACTCACACCCTAAACCTGCTTCCTTACTTAAAATTTTCTCTTTGTTAATATCAAATTCATTTTCATCATTGGACTGGCGTTGTTATTATTTGACCAACTCATCCATATATCAGTTTTTCGATAAAGTTTATTTTCTAAATAATACTATATTTTTTTTAAAATTACGAATCTAACTTCATGCTATTGTAATTCGGTGGTTTAACTTCAGCTGTTTTAATCGCTACTACAAGCTATTTAAATAATCCACTTTATAAATTTGTTGCAATGACCGTAAAGCTCTGCGTAGAATTCCACATGTCTTTTACGTTAGTTTTTCTCCCAGCTTACTACACTACCTAAGTACAGTATGCATTTCTTTTCATATAAAAGATC]

[+] EMBL CD081638             [CGGAGCCATTAATTCGGCACGAGGGCGAAAGCCTACCTATCTCACTACTCAGTCATATTATTATCTACCGGATTTTACTAACCGTCATCTCCGAAGTCCAGAAACAGTTCAAGCTCATGTGACGGAGCCTAGAGGTGTACCAAGGATGTCCAATTCAACAGTTCTTATTGAGGTTCCTAGCTGGCGTGTTATACCCATCCCAGGTGTCGAGAATCATGTGGATTGTTCTTGTGGAGCAAAACATTCCAAATCATGCCCCAAAAAGCACCAAGACAGAAGAAAACTAACAGATATGGATACTCTTAAATCACATAATCTCCGCGCCTTACGATCCAGCTTGCTGACTATTAACTCTGTTCATTCAAATAAAAATTATTCAACTCTAGAACTTAGGTCAAAACCCAGGTCTAGATCTTCTCAGACACATGAAGAGCATTCCCAAGTTGGAGAACCTGTCAAATCGGTTGGTGTTTTGGATGAAAACATATCAGATCCAGCATTTCTTGCTCGCCATTCACGTTTAGAAATTGAGGAAGTTCGTCACGAACGCTTATCTCGCCAGCGTACTGCAGAACAAGAACTAAAGCAACGTTTGGAAGAAAGGGATCAAGCCAGTTGGGTAAGGGAAAAGCTCTGTACACTGAGTTATCTGACATAAGAGACAACCTGGTCGTTTGGATCCACTTCTGAAGTATAGACCAGCTAGTCGGATGCCAACTCAGCTAAACTATACACTNNCAGCAGGACATCAGTTCCACGTAGACAACTCCATACCGGTGGTCGCATTTGGTTGTCGCGTGCCAGTAGCCTCACTAAAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD181970             [                                                                                                                                                             ACAGTTCTTATTGAGGTTCCTAGCTGGCGTGTTATACCCATCCCAGGTGTCGAGAATCATGTGGATTGTTCTTGTGGAGCAAAACATTCCAAATCATGCCCCAAAAAGCACCAAGACAGAAGAAAACTAACAGATATGGATACTCTTAAATCACATAATCTCCGCGCCTTACGATCCAGCTTGCTGACTATTAACTCTGTTCATTCAAATAAAAATTATTCAACTCTAGAACTTAGGTCAAAACCCAGGTCTAGATCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD074167             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACATCAGTTCCACGTAGACAACTCCATACCGGTGGTCGCATTTGGTTGTCGCGTGCCAGTAGCCTCACTAAAACCGTTCACAAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAACTTTTGAAGCTTTTCACATTGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATATTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCAGGTGCTTGATTCCTGTTATCTACCCTCTCAAATACAATATACTCACACCCTAAACCTGCTTCCTTACTTAAAATTTTCTCTTTGTTAATATCAAATTCATTTTCATCATTGGACTGGCGTTGTTATTATTTGACCAACTCATCCATATATCAGTTTTTCGATAAAGTTTATTTTCTAAATAATACTATATTTTTTTTAAAATTACGAATCTAACTTCATGCTATTGTAATTCGGTGGTTTAACTTCAGCTGTTTTAATCGCTACTACAAGCTATTTAAATAATCCACTTTATAAATTTGTTGCAATGACCGTAAAGCTCTGCGTAGAATTCCACATGTCTTTTACGTTAGTTTTTCTCCCAGCTTACTACACTACCTAAGTACAGTATGCATTTCTTTTCATATAAAAGATC]
[-] EMBL CD075460             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              anAACCGTTCACAAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAACTTTTGAAGCTTTTCACATTGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATATTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCAGGTGCTTGATTCCTGTTATCTACCCTCTCAAATACAATATACTCACACCCTAAACCTGCTTCCTTACTTAAAATTTTCTCTTTGTTAATATCAAATTCATTTTCATCATTGGACTGGCGTTGTTATTATTTGACCAACTCATCCATATATCAGTTTTTCGATAAAGTTTATTTTCTAAATAATACTATATTTTTTTTAAAATTACGAATCTAACTTCATGCTATTGTAATTCGGTGGTTTAACTTCAGCTGTTTTAATCGCTACTACAAGCTATTTAAATAATCCACTTTATAAATTTGTTGCAATGACCGTAAAGCTCTGCGTAGAATTCCACATGTCTTTTACGTTAGTTTTTCTCCCAGCTTACTACACTACCTAAGTACAGTATGCATTTCATATCATATAAAAGATC]
[-] EMBL CD075233             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAACTTTTGAAGCTTTTCACATTGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATATTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCAGGTGCTTGATTCCTGTTATCTACCCTCTCAAATACAATATACTCACACCCTAAACCTGCTTCCTTACTTAAAATTTTCTCTTTGTTAATATCAAATTCATTTTCATCATTGGACTGGCGTTGTTATTATTTGACCAACTCATCCATATATCAGTTTTTCGATAAAGTTTATTTTCTAAATAATACTATATTTTTTTTAAAATTACGAATCTAACTTCATGCTATTGTAATTCGGTGGTTTAACTTCAGCTGTTTTAATCGCTACTACAAGCTATTTAAATAATCCACTTTATAAATTTGTTGCAATGACCGTAAAGCTCTGCGTAGAATTCCACATGTCTTTTACGTTAGTTTTTCTCCCAGCTTACTACACTACCTAAGTACAGTATGCATTTCTTTTCATATAAAAGATC]




>consensus_10117#0
CGGAGCCATTAATTCGGCACGAGGGCGAAAGCCTACCTATCTCACTACTCAGTCATATTA
TTATCTACCGGATTTTACTAACCGTCATCTCCGAAGTCCAGAAACAGTTCAAGCTCATGT
GACGGAGCCTAGAGGTGTACCAAGGATGTCCAATTCAACAGTTCTTATTGAGGTTCCTAG
CTGGCGTGTTATACCCATCCCAGGTGTCGAGAATCATGTGGATTGTTCTTGTGGAGCAAA
ACATTCCAAATCATGCCCCAAAAAGCACCAAGACAGAAGAAAACTAACAGATATGGATAC
TCTTAAATCACATAATCTCCGCGCCTTACGATCCAGCTTGCTGACTATTAACTCTGTTCA
TTCAAATAAAAATTATTCAACTCTAGAACTTAGGTCAAAACCCAGGTCTAGATCTTCTCA
GACACATGAAGAGCATTCCCAAGTTGGAGAACCTGTCAAATCGGTTGGTGTTTTGGATGA
AAACATATCAGATCCAGCATTTCTTGCTCGCCATTCACGTTTAGAAATTGAGGAAGTTCG
TCACGAACGCTTATCTCGCCAGCGTACTGCAGAACAAGAACTAAAGCAACGTTTGGAAGA
AAGGGATCAAGCCAGTTGGGTAAGGGAAAAGCTCTGTACACTGAGTTATCTGACATAAGA
GACAACCTGGTCGTTTGGATCCACTTCTGAAGTATAGACCAGCTAGTCGGATGCCAACTC
AGCTAAACTATACACTNNCAGCAGGACATCAGTTCCACGTAGACAACTCCATACCGGTGG
TCGCATTTGGTTGTCGCGTGCCAGTAGCCTCACTAAAACCGTTCACAAAGTTCAGCATTC
AATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTA
ACTTTTGAAGCTTTTCACATTGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGAT
ATTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCAGGTGCTTGATTCCTGTTATCT
ACCCTCTCAAATACAATATACTCACACCCTAAACCTGCTTCCTTACTTAAAATTTTCTCT
TTGTTAATATCAAATTCATTTTCATCATTGGACTGGCGTTGTTATTATTTGACCAACTCA
TCCATATATCAGTTTTTCGATAAAGTTTATTTTCTAAATAATACTATATTTTTTTTAAAA
TTACGAATCTAACTTCATGCTATTGTAATTCGGTGGTTTAACTTCAGCTGTTTTAATCGC
TACTACAAGCTATTTAAATAATCCACTTTATAAATTTGTTGCAATGACCGTAAAGCTCTG
CGTAGAATTCCACATGTCTTTTACGTTAGTTTTTCTCCCAGCTTACTACACTACCTAAGT
ACAGTATGCATTTCTTTTCATATAAAAGATC

consensusID : consensus_10117#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1218
fasta sequence

                              [CATGCGTCCCGGCTCGCCATGGTCGTGCCGCGGNGAATTCGATTATCTCAGGCCAGGGACGAGAATCATGTGGATTGTTCTTGTGGAGCAAAACATTCCAAATCATGCCCCAAACTAGCACCAAGACAGAAGAAAACTAACAGATATGGATACTCTTAAATCACATAATCTCCGCGCCTTACGACCCAGCTTGCTGACTATTAACTCTGTTCATTCAAATAAAAATTATTCAACTCTAGAACTTAGGTCAAAACCCAGGTCTAGATCTTCTCAGACACATGAAGAGCATTCCCAAGTTGGAGGACCTGTCAAATCGGTTGGTGTTTTGGATGAAAACATATCAGATCCAGCATTTCTTGCTCGCCATTCACGTTTAGAAATTGAGGAAGTTCGTCCCGAACGCTTATCTCGCCAGCGTACTGCAG-AACAAGAACTAAAGCAACGTTTGGAAGAAAGGGATCAAGCCAGTTGGCATAAGAGACAACCTGGTCGTTTGGATCCACTTCTGAAGTATAGACCAGCTAGTCGGATGCCAACTCAGCTAAACTATACACTCAAGCAAGGACATCAGTTCCACGTAGACAACTCCATACCGGTGGTCGCATTTGGTTGTCGCGTGCCAGTAGCCTCACTAAAACCGTTCACAAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAACTTTTGAAGCTTTTCACATTGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATATTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCAGGTGCTTGATTCCTGTTATCTACCCTCTC-AATACCATATACTCACACCCTANACCTGCTTCCTTACTTAAATTTTTCTCTTTGTTAATATCAAATTCATTTTCATCATTGGACTGGCGTTGTTATTATTTGACCAACTCATCCATATATCAGTTTTTCGATAAAGTTTATTTTCTAAATAATACTATATTTTTTTTAAAATTACGAATCTAACTTCATGCTATTGTAATTCGGTGGTTTAACTTCAGCTGTTTTAATCGCTACTACAAGCTATTTAAATAATCCACTNTATAAATTTGTTGCAATGACCGTAAAGCTCTGCGTAGAATCCACATGTNNCTTTACGTAGTTNTTCTCCAGCTACTACACTACCTAGTACGTATGCATTTCTTCATATAAAG]

[+] EMBL CD124449             [CATGCGTCCCGGCTCGCCATGGTCGTGCCGCGGNGAATTCGATTATCTCAGGCCAGGGACGAGAATCATGTGGATTGTTCTTGTGGAGCAAAACATTCCAAATCATGCCCCAAACTAGCACCAAGACAGAAGAAAACTAACAGATATGGATACTCTTAAATCACATAATCTCCGCGCCTTACGACCCAGCTTGCTGACTATTAACTCTGTTCATTCAAATAAAAATTATTCAACTCTAGAACTTAGGTCAAAACCCAGGTCTAGATCTTCTCAGACACATGAAGAGCATTCCCAAGTTGGAGGACCTGTCAAATCGGTTGGTGTTTTGGATGAAAACATATCAGATCCAGCATTTCTTGCTCGCCATTCACGTTTAGAAATTGAGGAAGTTCGTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD124459             [                                                      AGGGACGAGAATCATGTGGATTGTTCTTGTGGAGCAAAACATTCCAAATCATGCCCCAAA AAGCACCAAGACAGAAGAAAACTAACAGATATGGATACTCTTAAATCACATAATCTCCGCGCCTTACGACCCAGCTTGCTGACTATTAACTCTGTTCATTCAAATAAAAATTATTCAACTCTAGAACTTAGGTCAAAACCCAGGTCTAGATCTTCTCAGACACATGAAGAGCATTCCCAAGTTGGAGGACCTGTCAAATCGGTTGGTGTTTTGGATGAAAACATATCAGATCCAGCATTTCTTGCTCGCCATTCACGTTTAGAAATTGAGGAAGTTCGTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD079972             [                                                                                                                                                                                                                            gaggATTATTCAACTCTAGAACTTAGGTCAAAACCCAGGTCTAGATCTTCTCAGACACATGAAGAGCATTCCCAAGTTGGAGAACCTGTCAAATCGGTTGGTGTTTTGGATGAAAACATATCAGATCCAGCATTTCTTGCTCGCCATTCACGTTTAGAAATTGAGGAAGTTCGTCACGAACGCTTATCTCGCCAGCGTACTGCAG AACAAGAACTAAAGCAACGTTTGGAAGAAAGGGATCAAGCCAGTTGGCATAAGAGACAACCTGGTCGTTTGGATCCACTTCTGAAGTATAGACCAGCTAGTCGGATGCCAACTCAGCTAAACTATACACTCAAGCAAGGACATCAGTTCCACGTAGACAACTCCATACCGGTGGTCGCATTTGGTTGTCGCGTGCCAGTAGCCTCACTAAAACCGTTCACAAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAACTTTTGAAGCTTTTCACATTGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATATTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCAGGTGCTTGATTCCTGTTATCTACCCTCTC AATACCATATACTCACACCCTANACCTGCTTCCTTACTTAAAT                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD064240             [                                                                                                                                                                                                                                                                                                                                                                            acaTCACGTTTAGAAA TGAGGAAG TCGTCACGAACGCTTATCTCGCCAGCGTACTGCAG AACAAGAACTAAAGCAACG TTGGAAGAAAGGGGTCAAGCCAGTTGGCATAAGAGACAACCTGGTCGTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD080811             [                                                                                                                                                                                                                                                                                                                                                                                                                  tgccagTCGCC GCGTACTGCAGCAACAAGAACTAAAGCAACGTTTGGAAGAAAGGGATCAAGCCAGTTGGCATAAGAGACAACCTGGTCGTTTGGATCCACTTCTGAAGTATAGACCAGCTAGTCGGATGCCAACTCAGCTAAACTATACACTCAAGCAAGGACATCAGTTCCACGTAGACAACTCCATACCGGTGGTCGCATTTGGTTGTCGCGTGCCAGTAGCCTCACTAAAACCGTTCACAAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAACTTTTGAAGCTTTTCACATTGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATATTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCAGGTGCTTGATTCCTGTTATCTACCCTCTCAAATACAATATACTCACACCCTAAACCTGCTTCCTTACTTAAAATTTTCTCTTTGTTAATATCAAATTCATTTTCATCATTGGACTGGCGTTGTTATTATTTGACCAACTCATCCATATATCAGTTTTTCGATAAAGTTTATTTTCTAAATAATACTATATTTTTTTTAAAATTACGAATCTAACTTCATGCTATTGTAATTCGGTGGTTTAACTTCAGCTGTTTTAATCGCTACTACAAGCTATTTAAATAATCCACTNTATAAATTTGTTGCAATGACCGTAAAGCTCTGCGTAGAATCCACATGTNNCTTTACGTAGTTNTTCTCCAGCTACTACACTACCTAGTACGTATGCATTTCTTCATATAAAG]
[+] EMBL CD081402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCCTAAGAGACAACCTGGTCGTTTGGATCCACTTCTGAAGTATAGACCACCTAGTCGGATGCCAACTCAGCTAAACTATACACTCAAGCAAGGACATCAGTTCCACGTAGACAACTCCATACCGGTGGTCGCATTTGGTTGTCGCGTGCCAGTAGCCTCACTAAAACCGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_10117#1
CATGCGTCCCGGCTCGCCATGGTCGTGCCGCGGNGAATTCGATTATCTCAGGCCAGGGAC
GAGAATCATGTGGATTGTTCTTGTGGAGCAAAACATTCCAAATCATGCCCCAAACTAGCA
CCAAGACAGAAGAAAACTAACAGATATGGATACTCTTAAATCACATAATCTCCGCGCCTT
ACGACCCAGCTTGCTGACTATTAACTCTGTTCATTCAAATAAAAATTATTCAACTCTAGA
ACTTAGGTCAAAACCCAGGTCTAGATCTTCTCAGACACATGAAGAGCATTCCCAAGTTGG
AGGACCTGTCAAATCGGTTGGTGTTTTGGATGAAAACATATCAGATCCAGCATTTCTTGC
TCGCCATTCACGTTTAGAAATTGAGGAAGTTCGTCCCGAACGCTTATCTCGCCAGCGTAC
TGCAGAACAAGAACTAAAGCAACGTTTGGAAGAAAGGGATCAAGCCAGTTGGCATAAGAG
ACAACCTGGTCGTTTGGATCCACTTCTGAAGTATAGACCAGCTAGTCGGATGCCAACTCA
GCTAAACTATACACTCAAGCAAGGACATCAGTTCCACGTAGACAACTCCATACCGGTGGT
CGCATTTGGTTGTCGCGTGCCAGTAGCCTCACTAAAACCGTTCACAAAGTTCAGCATTCA
ATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAA
CTTTTGAAGCTTTTCACATTGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATA
TTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCAGGTGCTTGATTCCTGTTATCTA
CCCTCTCAATACCATATACTCACACCCTANACCTGCTTCCTTACTTAAATTTTTCTCTTT
GTTAATATCAAATTCATTTTCATCATTGGACTGGCGTTGTTATTATTTGACCAACTCATC
CATATATCAGTTTTTCGATAAAGTTTATTTTCTAAATAATACTATATTTTTTTTAAAATT
ACGAATCTAACTTCATGCTATTGTAATTCGGTGGTTTAACTTCAGCTGTTTTAATCGCTA
CTACAAGCTATTTAAATAATCCACTNTATAAATTTGTTGCAATGACCGTAAAGCTCTGCG
TAGAATCCACATGTNNCTTTACGTAGTTNTTCTCCAGCTACTACACTACCTAGTACGTAT
GCATTTCTTCATATAAAG

consensusID : consensus_10117#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 598
fasta sequence

                              [AGATACGTGAAATTCAGATCAGGACACGTAGAAATCTTTCTAATCATCTACCGACTAAACATGCTTGTATATGGAAAGACAGTTGCACATTCGTGGTTCCAATTTATGTGGTGAGGTGTCACGTTCAGTATTCGGTGTCAAAAGTCTCTACAAACTATTCACCACTGATTCATAAGTTCTAATTTATGAACCATAACTTAGGGTGACTTGTATTCATGGACTTTAACTCAACCTTATTGTCTTAATGGTAATGCTTGTGATTATGTTACCAAACATTCGAATCAAGTAGGTTTAGAGGGACACTTCAGCAATGTCGGTAACTGTGTAACATTTGTGAAGATTTTAATTTTTATAGCTTTTGAACATCCAACATTGTCTTTTATTTTTGTAGACCGTTCACAAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAACTTTTGAAGCTTTTCACANNGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATATTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCGGGTGCTTGATTCCTGAACCTACCTT]

[-] EMBL CD065213             [AGATACGTGAAATTCAGATCAGGACACGTAGAAATCTTTCTAATCATCTACCGACTAAACATGCTTGTATATGGAAAGACAGTTGCACATTCGTGGTTCCAATTTATGTGGTGAGGTGTCACGTTCAGTATTCGGTGTCAAAAGTCTCTACAAACTATTCACCACTGATTCATAAGTTCTAATTTATGAACCATAACTTAGGGTGACTTGTATTCATGGACTTTAACTCAACCTTATTGTCTTAATGGTAATGCTTGTGATTATGTTACCAAACATTCGAATCAAGTAGGTTTAGAGGGACACTTCAGCAATGTCGGTAACTGTGTAACATTTGTGAAGATTTTAATTTTTATAGCTTTTGAACATCCAACATTGTCTTTTATTTTTGTAGACCGTTCACAAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAACTTTTGAAGCTTTTCACANNGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATATTATTCCTACGATTTATCCTTCCATGGTCAGTTGGTCGGGTGCTTGATTCCTGAACCTACCTT]




>consensus_10117#2
AGATACGTGAAATTCAGATCAGGACACGTAGAAATCTTTCTAATCATCTACCGACTAAAC
ATGCTTGTATATGGAAAGACAGTTGCACATTCGTGGTTCCAATTTATGTGGTGAGGTGTC
ACGTTCAGTATTCGGTGTCAAAAGTCTCTACAAACTATTCACCACTGATTCATAAGTTCT
AATTTATGAACCATAACTTAGGGTGACTTGTATTCATGGACTTTAACTCAACCTTATTGT
CTTAATGGTAATGCTTGTGATTATGTTACCAAACATTCGAATCAAGTAGGTTTAGAGGGA
CACTTCAGCAATGTCGGTAACTGTGTAACATTTGTGAAGATTTTAATTTTTATAGCTTTT
GAACATCCAACATTGTCTTTTATTTTTGTAGACCGTTCACAAAGTTCAGCATTCAATAAA
TTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTACAGTCTTTCGTTTTAACTTTT
GAAGCTTTTCACANNGTATATATTAGCTTTTGTTACACTGTTGTTCTGACTGATATTATT
CCTACGATTTATCCTTCCATGGTCAGTTGGTCGGGTGCTTGATTCCTGAACCTACCTT

consensusID : consensus_10117#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 250
fasta sequence

                              [CGTCGGAAATCTATTGATCAGCTTATTGAACCTTCGATCCATGGATTACCAGATCCCGAAATTTCCTCTAAACCTCGTACACGAAAACCAACTCAATTTTTACAACTAAATGCACAAACTACTGAACCTTCGTGTAATGATCGAAAGCCTACCTATCTCACTACTCAGTCATATTATTATCTACCGGATTTTACTAACCGTCATCTCCGAAGTCCAGAAACAGTTCAAGCTCATGTGACGGAGCCTAGAG]

[+] EMBL CD191992             [CGTCGGAAATCTATTGATCAGCTTATTGAACCTTCGATCCATGGATTACCAGATCCCGAAATTTCCTCTAAACCTCGTACACGAAAACCAACTCAATTTTTACAACTAAATGCACAAACTACTGAACCTTCGTGTAATGATCGAAAGCCTACCTATCTCACTACTCAGTCATATTATTATCTACCGGATTTTACTAACCGTCATCTCCGAAGTCCAGAAACAGTTCAAGCTCATGTGACGGAGCCTAGAG]




>consensus_10117#3
CGTCGGAAATCTATTGATCAGCTTATTGAACCTTCGATCCATGGATTACCAGATCCCGAA
ATTTCCTCTAAACCTCGTACACGAAAACCAACTCAATTTTTACAACTAAATGCACAAACT
ACTGAACCTTCGTGTAATGATCGAAAGCCTACCTATCTCACTACTCAGTCATATTATTAT
CTACCGGATTTTACTAACCGTCATCTCCGAAGTCCAGAAACAGTTCAAGCTCATGTGACG
GAGCCTAGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10117#0      CGGAGCCATTAATTCGGCACGAGGGCGAAAGCCTACCTATCTCACTACTCAGTCATATTA 60
consensus_10117#1      ------------------------------------------------------------
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      TTATCTACCGGATTTTACTAACCGTCATCTCCGAAGTCCAGAAACAGTTCAAGCTCATGT 120
consensus_10117#1      ------------------------------------------------------------
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      GACGGAGCCTAGAGGTGTACCAAGGATGTCCAATTCAACAGTTCTTATTGAGGTTCCTAG 180
consensus_10117#1      --------------------------CATGCGTCCCGGCTCGCCATGGTCGTGCCGCGGN 34
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      CTGGCGTGTTATACCCATCCCAGGTGTCGAGAATCATGTGGATTGTTCTTGTGGAGCAAA 240
consensus_10117#1      GAATTCGATTAT-CTCAGGCCAGG-GACGAGAATCATGTGGATTGTTCTTGTGGAGCAAA 92
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      ACATTCCAAATCATGCCCCAAAA-AGCACCAAGACAGAAGAAAACTAACAGATATGGATA 299
consensus_10117#1      ACATTCCAAATCATGCCCCAAACTAGCACCAAGACAGAAGAAAACTAACAGATATGGATA 152
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      CTCTTAAATCACATAATCTCCGCGCCTTACGATCCAGCTTGCTGACTATTAACTCTGTTC 359
consensus_10117#1      CTCTTAAATCACATAATCTCCGCGCCTTACGACCCAGCTTGCTGACTATTAACTCTGTTC 212
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      ATTCAAATAAAAATTATTCAACTCTAGAACTTAGGTCAAAACCCAGGTCTAGATCTTCTC 419
consensus_10117#1      ATTCAAATAAAAATTATTCAACTCTAGAACTTAGGTCAAAACCCAGGTCTAGATCTTCTC 272
consensus_10117#2      -----------------AGATACGTGAAATTCAGATCAGGAC--ACGTAGAAATCTTTCT 41
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      AGACACATGAAGAGCATTCCCAAGTTGGAGAACCTGTCAAATCGGTTG-GTGTTTTGGAT 478
consensus_10117#1      AGACACATGAAGAGCATTCCCAAGTTGGAGGACCTGTCAAATCGGTTG-GTGTTTTGGAT 331
consensus_10117#2      AATCATCTACCGACTAAACATGCTT----GTATATGGAAAGACAGTTGCACATTCGTGGT 97
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      GAAAACATATCAGATCCAGCATTTCTTGCTCGCCATTCACGTTTAGAAATTGAGGAAGTT 538
consensus_10117#1      GAAAACATATCAGATCCAGCATTTCTTGCTCGCCATTCACGTTTAGAAATTGAGGAAGTT 391
consensus_10117#2      TCCAATTTATGTGGT--GAGGTGTCACGTTCAGTATTCGGTGTCAAAAGTCTCTACAAAC 155
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      CGTCACGAACGCTTATCTCGCCAGCGTACTGCAGAACAAGAACTAAAGCAACGTTTGGAA 598
consensus_10117#1      CGTCCCGAACGCTTATCTCGCCAGCGTACTGCAGAACAAGAACTAAAGCAACGTTTGGAA 451
consensus_10117#2      TATTC--ACCACTGAT-TCATAAG----TTCTAATTTATGAACCATAAC----TTAGGGT 204
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      GAAAGGGATCAAGCCAGTTGGGTAAGGGAAAAGCTCTGTACACTGAGTTATCTGACATAA 658
consensus_10117#1      GAAAGGGATCAAGCCAGTTGG----------------------------------CATAA 477
consensus_10117#2      GACTTGTATTCATGGACTTTA--------------------------------------- 225
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      GAGACAACCTGGTCGTTTGGATC----CACTTCTGAAGTATAGACCAGCTAGTCGGATGC 714
consensus_10117#1      GAGACAACCTGGTCGTTTGGATC----CACTTCTGAAGTATAGACCAGCTAGTCGGATGC 533
consensus_10117#2      -ACTCAACCTTATTGTCTTAATGGTAATGCTTGTGATTATGTTACCAAACATTCGAAT-- 282
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      CAACTCAGCTAAACTATACACTNNCAGCAGGACATCAGTTCCACG----TAGACAACTCC 770
consensus_10117#1      CAACTCAGCTAAACTATACACTCAAGCAAGGACATCAGTTCCACG----TAGACAACTCC 589
consensus_10117#2      CAAGTAGGTTTAGAGGGACACTTCAGCAATGTCGGTAACTGTGTAACATTTGTGAAGATT 342
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      ATACCGGTGGTCGCATTTGGTTGTC--GCGTGCCAGTAGCCTCACTAA--AACCGTTCAC 826
consensus_10117#1      ATACCGGTGGTCGCATTTGGTTGTC--GCGTGCCAGTAGCCTCACTAA--AACCGTTCAC 645
consensus_10117#2      TTAATTTTTATAGCTTTTGAACATCCAACATTGTCTTTTATTTTTGTA--GACCGTTCAC 400
consensus_10117#3      ---CGTCGGAAATCTATTGATCAGCTTATTGAACCTTCGATCCATGGATTACCAGATCCC 57
                                    *  ***     *           *          *    * * ** *

consensus_10117#0      AAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTAC 886
consensus_10117#1      AAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTAC 705
consensus_10117#2      AAAGTTCAGCATTCAATAAATTCGCACTGAAGTTAGTGTCAGGTTATTCACAGAATGTAC 460
consensus_10117#3      GAAATTT--CCTCTAAACCTCGTACACGAAAACCAACTCAATTTTTACAACTAAATGCAC 115
                        ** **   * *  **        ***  **   *     *  **    **  **** **

consensus_10117#0      AGTCTTTCGTTTTAACTTTTGAAGCTTTTCACATTGTATATATTAGCTTTT-GTTACACT 945
consensus_10117#1      AGTCTTTCGTTTTAACTTTTGAAGCTTTTCACATTGTATATATTAGCTTTT-GTTACACT 764
consensus_10117#2      AGTCTTTCGTTTTAACTTTTGAAGCTTTTCACANNGTATATATTAGCTTTT-GTTACACT 519
consensus_10117#3      AAACTACTGAACCTTCGTGTAATGATCGAAAGCCTACCTATCTCACTACTCAGTCATATT 175
                       *  **   *      * * * * * *    *       *** * *    *  ** * * *

consensus_10117#0      GTTGTTCTGACTGATATTATT--CCTACGATTTATCCTTCCATGGTCAGTT---GGTCAG 1000
consensus_10117#1      GTTGTTCTGACTGATATTATT--CCTACGATTTATCCTTCCATGGTCAGTT---GGTCAG 819
consensus_10117#2      GTTGTTCTGACTGATATTATT--CCTACGATTTATCCTTCCATGGTCAGTT---GGTCGG 574
consensus_10117#3      ATTAT-CTACCGGATTTTACTAACCGTCATCTCCGAAGTCCAGAAACAGTTCAAGCTCAT 234
                        ** * **  * *** *** *  **  *   *      ****    *****   * **  

consensus_10117#0      GTGCTTGATTCCTGTTATCTACCCTCTCAAATACAATATACTCACACCCTAAACCTGCTT 1060
consensus_10117#1      GTGCTTGATTCCTGTTATCTACCCTCTCAA-TACCATATACTCACACCCTANACCTGCTT 878
consensus_10117#2      GTGCTTGATTCCTGA-ACCTACCTT----------------------------------- 598
consensus_10117#3      GTGACGGAGCCTAGAG-------------------------------------------- 250
                       ***   **  *  *                                              

consensus_10117#0      CCTTACTTAAAATTTTCTCTTTGTTAATATCAAATTCATTTTCATCATTGGACTGGCGTT 1120
consensus_10117#1      CCTTACTTAAATTTTTCTCTTTGTTAATATCAAATTCATTTTCATCATTGGACTGGCGTT 938
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      GTTATTATTTGACCAACTCATCCATATATCAGTTTTTCGATAAAGTTTATTTTCTAAATA 1180
consensus_10117#1      GTTATTATTTGACCAACTCATCCATATATCAGTTTTTCGATAAAGTTTATTTTCTAAATA 998
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      ATACTATATTTTTTTTAAAATTACGAATCTAACTTCATGCTATTGTAATTCGGTGGTTTA 1240
consensus_10117#1      ATACTATATTTTTTTTAAAATTACGAATCTAACTTCATGCTATTGTAATTCGGTGGTTTA 1058
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      ACTTCAGCTGTTTTAATCGCTACTACAAGCTATTTAAATAATCCACTTTATAAATTTGTT 1300
consensus_10117#1      ACTTCAGCTGTTTTAATCGCTACTACAAGCTATTTAAATAATCCACTNTATAAATTTGTT 1118
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      GCAATGACCGTAAAGCTCTGCGTAGAATTCCACATGTCTTTTACGTTAGTTTTTCTCCCA 1360
consensus_10117#1      GCAATGACCGTAAAGCTCTGCGTAGAAT-CCACATGTNNCTTTACGTAGTTNTTCTCC-A 1176
consensus_10117#2      ------------------------------------------------------------
consensus_10117#3      ------------------------------------------------------------
                                                                                   

consensus_10117#0      GCTTACTACACTACCTAAGTACAGTATGCATTTCTTTTCATATAAAAGATC 1411
consensus_10117#1      GCT-ACTACACTACCTA-GTAC-GTATGCATTTCTT--CATATAAAG---- 1218
consensus_10117#2      ---------------------------------------------------
consensus_10117#3      ---------------------------------------------------