cluster # 10128

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Schistosoma mansoni
cluster # 10128 cluster # 10128 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10128#0 length = 870 sequences # 10
consensus_10128#1 length = 606 sequences # 1

consensus_10128#2 length = 547 sequences # 1
consensus_10128#3 length = 399 sequences # 1

consensusID : consensus_10128#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 870
fasta sequence

                              [CGGCACAATACAAATTTCGAAGTTGTCGGGATGTTCGAGGCTAGGCTTACACAGGCTGATATATGGAAGAAGGTCATTGATGCCATAAAAGACCTCGTACAAGAAGCGACTCTTGATTGTACAGAAAATGGTATCAGTTTACAAGCTATGGATAACGCACATGTGAGCTTGGTGTCGTTGCTTCTGCGAAGTGATGGCTTTGAGACATACAGATGTGATAGGAATCTGTCATTGGGCCTGAACATCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCACTCTAAAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATATCAGTTGCGAAAGACGGTGTTTCCTTCAGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTCACTAAAGCCACTCCACTCTCTAGCCAAGTTGTATTATCTCTTACTGAGAACGTCCCTGCAGTTGTGGAGTTTGGTATTGAAGACCTGGGTTATATCCGGTATTATTTGGCACCGAAAATTGAAGATGACGCCGACTAGGATAAAT-AACTACACTCA-CAGACTA-TNTNCTACTTA-TGTACATNACCATAAATGTAG]

[+] EMBL CD079704             [CGGCACGAGGCAAATTTCGAAGTTGTCGGGATGTTCGAGGCTAGGCTTACACAGGCTGATATATGGAAGAAGGTCATTGATGCCATAAAAGACCTCGTACAAGAAGCGACTCTTGATTGTACAGAAAATGGTATCAGTTTACAAGCTATGGATAACGCACATGTGAGCTTGGTGTCGTTGCTTCTGCGAAGTGATGGCTTTGAGACATACAGATGTGATAGGAATCTGTCATTGGGCCTGAACATCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCACTCTAAAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATATCAGTTGCGAAAGACGGTGTTTCCTTCAGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTCACTAAAGCCACTCCACTCTCTAGCCAAGTTGTATTATCTCTTACTGAGAACGTNCCTGCAGTTGTGGAGTTTGGTATTGAAGACCTGNNGTATATNCNGTATTATTTGGCACCGAAAATTG AGATGACGCCGACTAGGATAAAT AACTACACTCA CAGACTA TNTNCTACTTA TGTACATNACCATAAATGTAG]
[-] EMBL CD180719             [    gCAATACAAATTTCGAAGTTGTCGGGATGTTCGAGGCTAGGCTTACACAGGCTGATATATGGAAGAAGGTCATTGATGCCATAAAAGACCTCGTACAAGAAGCGACTCTTGATTGTACAGAAAATGGTATCAGTTTACAAGCTATGGATAACGCACATGTGAGCTTGGTGTCGTTGCTTCTGCGAAGTGATGGCTTTGAGACATACAGATGTGATAGGAATCTGTCATTGGGCCTGAACATCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD178778             [      AATACAAATTTCGAAGTTGTCGGGATGTTCGAGGCTAGGCTTACACAGGCTGATATATGGAAGAAGGTCATTGATGCCATAAAAGACCTCGTACAAGAAGCGACTCTTGATTGTACAGAAAATGGTATCAGTTTACAAGCTATGGATAACGCACATGTGAGCTTGGTGTCGTTGCTTCTGCGAAGTGATGGCTTTGAGACATACAGATGTGATAGGAATCTGTCATTGGGCCTGAACATCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCACTCTAAAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTGATTATAAGTGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD078807             [                                                                                                                         CAGAAAATGGTATCAGTTTACAAGCTATGGATAACGCACATGTGAGCTTGGTGTCGTTGCTTCTGCGAAGTGATGGCTTTGAGACATACAGATGTGATAGGAATCTGTCATTGGGCCTGAACATCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCACTCTAAAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATTAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATATCAGTTGCGAAAGACGGTGTTTCCTTCAGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTCACTANAGCCACTCCACTCTCTAGCCAAGTTGTATTATCTCTTA                                                                                                                                                            ]
[+] EMBL CD133292             [                                                                                                                                                                                                                                  ctgcccTGGGCCTGAACATCACAAGTGCGTCTAAAATTCTACGATGCGCTAGTGGGAACGATGCAATCACTCTAAAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATATCAGTTGCGAAAGACGGTGTTTCCTTCAGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAAATGCACGAGGCTGTC                                                                                                                                                                                                                                           ]
[-] EMBL CD139310             [                                                                                                                                                                                                                                                          GTGCGTCTAAAATTTTACGATGTGCTAGTGGGAACGATGCAATCACTCTAAAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATGTCAGTTGCGAAAGACGGTGTTTCCTTCAGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGC                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD073267             [                                                                                                                                                                                                                                                                                   TAGTGGGAACGATGCAATCACTCTAAAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATTAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATATCAGTTGCGAAAGACGGTGTTTCCTTCAGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTCACTAAAGCCACTCCACTCTCTAGCCAAGTTGTATTATCTCTTACTGAGAACGTCCCTGCAGTTGTGGAGTTTGGTATTGAAGACCTGGGTTATATCCGGTATTATTTGGCACCGAAAATTGAAGATGACGCCGACTAGGATAAATAAACTACACTCACCAGACTATTTTCCTACTTATTGTACATCACAATAAATGTA ]
[-] EMBL CD136173             [                                                                                                                                                                                                                                                                                                                                           TTGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATATCAGTTGCGAAAGACGGTGTTTCCTTCAGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTCACTA                                                                                                                                                                                                   ]
[-] EMBL BG931267             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCCTTCAGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTCACTAAAGCCACTCCACTCTCTAGCCAAGTTGTATTATCTCTTACTGAGAACGTCCCTGCAGTTGTGGAGTTTGGTATTGAAGAg                                                                                                                   ]
[-] EMBL CD133131             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAGAGGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTCACTAAAGCCACTCCACTCTCTAGCCAAGTTGTATTATCTCTTACTGAGAACGTCCCTGCAGTTGTGGAGTTTGGTATTGAAGACCTGGGTTATGTCCGGTATTATTTGGCACCGAAAATCGAAGATGACGCCGACTAGGATAAAT AAa                                                  ]




>consensus_10128#0
CGGCACAATACAAATTTCGAAGTTGTCGGGATGTTCGAGGCTAGGCTTACACAGGCTGAT
ATATGGAAGAAGGTCATTGATGCCATAAAAGACCTCGTACAAGAAGCGACTCTTGATTGT
ACAGAAAATGGTATCAGTTTACAAGCTATGGATAACGCACATGTGAGCTTGGTGTCGTTG
CTTCTGCGAAGTGATGGCTTTGAGACATACAGATGTGATAGGAATCTGTCATTGGGCCTG
AACATCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCACTCTA
AAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGG
TCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGAT
ACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGAC
TTAAGCCAAATAGGAGATTCCGTCGTAATATCAGTTGCGAAAGACGGTGTTTCCTTCAGC
TCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAG
CCCGAGGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCAC
TACTTCAACATATTCACTAAAGCCACTCCACTCTCTAGCCAAGTTGTATTATCTCTTACT
GAGAACGTCCCTGCAGTTGTGGAGTTTGGTATTGAAGACCTGGGTTATATCCGGTATTAT
TTGGCACCGAAAATTGAAGATGACGCCGACTAGGATAAATAACTACACTCACAGACTATN
TNCTACTTATGTACATNACCATAAATGTAG

consensusID : consensus_10128#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 606
fasta sequence

                              [TCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCACTCTAAAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATATCAGTTGCGAAAGACGGTGTTTCCTTCTGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAAGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTCACTAAAGCCACTCCACTCTCTAGCCAAGTTGTATTATCTCTTACTGAGAACGTCCCTGCAGGTAATTGCACACTTAACTTATCTCGTAGTTGTGGAGTTTGGTATTGAAGACCTGNGTTATATCCGGTATTATTTGGCACCGAANATCGAAGATGACGCCGACTAGGATAAATAA]

[+] EMBL CD132824             [TCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCACTCTAAAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATATCAGTTGCGAAAGACGGTGTTTCCTTCTGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAAGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTCACTAAAGCCACTCCACTCTCTAGCCAAGTTGTATTATCTCTTACTGAGAACGTCCCTGCAGGTAATTGCACACTTAACTTATCTCGTAGTTGTGGAGTTTGGTATTGAAGACCTGNGTTATATCCGGTATTATTTGGCACCGAANATCGAAGATGACGCCGACTAGGATAAATAA]




>consensus_10128#1
TCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCACTCTAAAGG
CTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGGTCAT
CGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACCATCTGGGTATTCCTGATACTG
ATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAA
GCCAAATAGGAGATTCCGTCGTAATATCAGTTGCGAAAGACGGTGTTTCCTTCTGCTCAA
ACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCG
AAGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACT
TCAACATATTCACTAAAGCCACTCCACTCTCTAGCCAAGTTGTATTATCTCTTACTGAGA
ACGTCCCTGCAGGTAATTGCACACTTAACTTATCTCGTAGTTGTGGAGTTTGGTATTGAA
GACCTGNGTTATATCCGGTATTATTTGGCACCGAANATCGAAGATGACGCCGACTAGGAT
AAATAA

consensusID : consensus_10128#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 547
fasta sequence

                              [CGAACTTATGATTCAAGATAGGTGTGATGAATATTGTTGTGCTGTTTTCGCAATCATCCGATTCTTTTCTGTCGTGTTATAACTTTTTATTCACCAGTATCCGAGGCATTCATCGGTGTTGAAATTTGCTGTTGCCCTTTCTTCTGTAAATATAGAGTAGGCAATACTTATTTAGTGTAATCCTAAGGTTTAAGCATTCAATCTCCAACTCCATCGAAACCTCATTTCAATTCCAGTTTAGTTAACTGGATAGTATTTTTAGCCTTCCTGCGAAACGTATTGTTCAAAGCTGGATACACAACTTTCTCCCTAATTGTTAAGTTTCATCAGATTCCACAATGTTAGTACTCGTTTGGGTACATAGTTTTGTTAGAAAGGAATCTCTGATAAGAACTTGGATCTCCAGAGGATTATTAGGCCTAAAGTAGTGTGTGCTTTTACACAAATGGGCAGGTAAAACGTTCACTTCCTCCAGTTGATTNTTTATGCTATCCTTANCAATCTGAGAACACCACTACTGCTTCATTCCACTTCATCCACCCGTGCC]

[+] EMBL CD079844             [CGAACTTATGATTCAAGATAGGTGTGATGAATATTGTTGTGCTGTTTTCGCAATCATCCGATTCTTTTCTGTCGTGTTATAACTTTTTATTCACCAGTATCCGAGGCATTCATCGGTGTTGAAATTTGCTGTTGCCCTTTCTTCTGTAAATATAGAGTAGGCAATACTTATTTAGTGTAATCCTAAGGTTTAAGCATTCAATCTCCAACTCCATCGAAACCTCATTTCAATTCCAGTTTAGTTAACTGGATAGTATTTTTAGCCTTCCTGCGAAACGTATTGTTCAAAGCTGGATACACAACTTTCTCCCTAATTGTTAAGTTTCATCAGATTCCACAATGTTAGTACTCGTTTGGGTACATAGTTTTGTTAGAAAGGAATCTCTGATAAGAACTTGGATCTCCAGAGGATTATTAGGCCTAAAGTAGTGTGTGCTTTTACACAAATGGGCAGGTAAAACGTTCACTTCCTCCAGTTGATTNTTTATGCTATCCTTANCAATCTGAGAACACCACTACTGCTTCATTCCACTTCATCCACCCGTGCC]




>consensus_10128#2
CGAACTTATGATTCAAGATAGGTGTGATGAATATTGTTGTGCTGTTTTCGCAATCATCCG
ATTCTTTTCTGTCGTGTTATAACTTTTTATTCACCAGTATCCGAGGCATTCATCGGTGTT
GAAATTTGCTGTTGCCCTTTCTTCTGTAAATATAGAGTAGGCAATACTTATTTAGTGTAA
TCCTAAGGTTTAAGCATTCAATCTCCAACTCCATCGAAACCTCATTTCAATTCCAGTTTA
GTTAACTGGATAGTATTTTTAGCCTTCCTGCGAAACGTATTGTTCAAAGCTGGATACACA
ACTTTCTCCCTAATTGTTAAGTTTCATCAGATTCCACAATGTTAGTACTCGTTTGGGTAC
ATAGTTTTGTTAGAAAGGAATCTCTGATAAGAACTTGGATCTCCAGAGGATTATTAGGCC
TAAAGTAGTGTGTGCTTTTACACAAATGGGCAGGTAAAACGTTCACTTCCTCCAGTTGAT
TNTTTATGCTATCCTTANCAATCTGAGAACACCACTACTGCTTCATTCCACTTCATCCAC
CCGTGCC

consensusID : consensus_10128#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 399
fasta sequence

                              [TGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGAATTTAGATGTTGACCATGTGGGCATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATCTCAGTTGCGAAAGACGGTGTTTCCTTCAGCTCAATCGGTGATTTAGGCACTGTAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTGTTGTGCTGTTTTCGCAATCATCCGATTCTTTTCTGTCGTGTTATAACTTTTTATTC]

[-] EMBL CD187689             [TGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGAATTTAGATGTTGACCATGTGGGCATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATCTCAGTTGCGAAAGACGGTGTTTCCTTCAGCTCAATCGGTGATTTAGGCACTGTAAATGTGAAGCTTTGTCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAAATGCACGAGGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTGTTGTGCTGTTTTCGCAATCATCCGATTCTTTTCTGTCGTGTTATAACTTTTTATTC]




>consensus_10128#3
TGTTTTTGAGTCAAAATCTCAAGACAGGTCATCGGAATTCGAGATCAAATTAATGAATTT
AGATGTTGACCATGTGGGCATTCCTGATACTGATTATAAGTGCATCATTCGAATGCCTTC
CGCACAGTTACAACGGATATGTCGAGACTTAAGCCAAATAGGAGATTCCGTCGTAATCTC
AGTTGCGAAAGACGGTGTTTCCTTCAGCTCAATCGGTGATTTAGGCACTGTAAATGTGAA
GCTTTGTCAATCTGCTAACGCTGACAAGCCCGAGGAGTCTGTTTCGATAGAAATGCACGA
GGCTGTCAGCATGACTTATTCTTTGCACTACTTCAACATATTGTTGTGCTGTTTTCGCAA
TCATCCGATTCTTTTCTGTCGTGTTATAACTTTTTATTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10128#0      CGGCACAATACAAATTTCGAAGTTGTCGGGATGTTCGAGGCTAGGCTTACACAGGCTGAT 60
consensus_10128#1      ------------------------------------------------------------
consensus_10128#3      ------------------------------------------------------------
consensus_10128#2      ------------------------------------------------------------
                                                                                   

consensus_10128#0      ATATGGAAGAAGGTCATTGATGCCATAAAAGACCTCGTACAAGAAGCGACTCTTGATTGT 120
consensus_10128#1      ------------------------------------------------------------
consensus_10128#3      ------------------------------------------------------------
consensus_10128#2      ------------------------------------------------------------
                                                                                   

consensus_10128#0      ACAGAAAATGGTATCAGTTTACAAGCTATGGATAACGCACATGTGAGCTTGGTGTCGTTG 180
consensus_10128#1      ------------------------------------------------------------
consensus_10128#3      ------------------------------------------------------------
consensus_10128#2      ------------------------------------------------------------
                                                                                   

consensus_10128#0      CTTCTGCGAAGTGATGGCTTTGAGACATACAGATGTGATAGGAATCTGTCATTGGGCCTG 240
consensus_10128#1      ------------------------------------------------------------
consensus_10128#3      ------------------------------------------------------------
consensus_10128#2      ------------------------------------------------------------
                                                                                   

consensus_10128#0      AACATCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCACTCTA 300
consensus_10128#1      ----TCACAAGTGCGTCTAAAATTCTACGATGTGCTAGTGGGAACGATGCAATCACTCTA 56
consensus_10128#3      ------------------------------------------------------------
consensus_10128#2      -----------CGAACTTATGATTCAAGATAGGTGTGATGAATATTGTTGTGCTGTTTTC 49
                                                                                   

consensus_10128#0      AAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGG 360
consensus_10128#1      AAGGCTGGAGACAAGGCGGATACACTGACATTTGTTTTTGAGTCAAAATCTCAAGACAGG 116
consensus_10128#3      --------------------------------TGTTTTTGAGTCAAAATCTCAAGACAGG 28
consensus_10128#2      GCAATCATCCGATTCTTTTCTGTCGTGTTATAACTTTTTATTCACCAGTATCCGAGGCAT 109
                                                         *****       * * **        

consensus_10128#0      TCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACC--ATCTGGGTATTCCTG 418
consensus_10128#1      TCATCGGAATTCGAGATCAAATTAATGGATTTAGATGTTGACC--ATCTGGGTATTCCTG 174
consensus_10128#3      TCATCGGAATTCGAGATCAAATTAATGAATTTAGATGTTGACC--ATGTGGGCATTCCTG 86
consensus_10128#2      TCATCGGTGTTGAAATTTGCTGTTGCCCTTTCTTCTGTAAATATAGAGTAGGCAATACT- 168
                       *******  **  *  *     *      **    ***  *       * ** * * ** 

consensus_10128#0      ATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAG 478
consensus_10128#1      ATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAG 234
consensus_10128#3      ATACTGATTATAAGTGCATCATTCGAATGCCTTCCGCACAGTTACAACGGATATGTCGAG 146
consensus_10128#2      -TATTTAGTGTAATCCTAAGGTTTAAGCATTCAATCTCCAACTCCATCGAA---ACCTCA 224
                        ** * * * ***    *   **  *            **  * ** ** *     *   

consensus_10128#0      ACTTAAGCCAAAT--AGGAGATTCCGTCGTAATATCAG--TTGCGAAAGACGGTGTTTCC 534
consensus_10128#1      ACTTAAGCCAAAT--AGGAGATTCCGTCGTAATATCAG--TTGCGAAAGACGGTGTTTCC 290
consensus_10128#3      ACTTAAGCCAAAT--AGGAGATTCCGTCGTAATCTCAG--TTGCGAAAGACGGTGTTTCC 202
consensus_10128#2      TTTCAATTCCAGTTTAGTTAACTGGATAGTATTTTTAGCCTTCCTGCGAAACGTATTGTT 284
                         * **  * * *  **   * *   * *** * * **  ** *     *  ** **   

consensus_10128#0      TTCAGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGC-TAACGC 593
consensus_10128#1      TTCTGCTCAAACGGTGATTTAGGTACTGGAAATGTGAAGCTTTGTCAATCTGC-TAACGC 349
consensus_10128#3      TTCAGCTCAATCGGTGATTTAGGCACTGTAAATGTGAAGCTTTGTCAATCTGC-TAACGC 261
consensus_10128#2      CAAAGCTGGATACACAACTTT--CTCCCTAATTGTTAAGTTTCATCAGATTCCACAATGT 342
                           ***  *      * **     *   ** *** *** **  ***   * *  ** * 

consensus_10128#0      TGACAA--GCCCGAGGAGTCTGTTTCGATAGAAATGCA-CGAGGCTGTCAGCATGACTTA 650
consensus_10128#1      TGACAA--GCCCGAAGAGTCTGTTTCGATAGAAATGCA-CGAGGCTGTCAGCATGACTTA 406
consensus_10128#3      TGACAA--GCCCGAGGAGTCTGTTTCGATAGAAATGCA-CGAGGCTGTCAGCATGACTTA 318
consensus_10128#2      TAGTACTCGTTTGGGTACATAGTTTTGTTAGAAAGGAATCTCTGATAAGAACTTGGATC- 401
                       *   *   *   *   *    **** * ****** * * *   * *   * * **  *  

consensus_10128#0      TTCTTTGCACTACTTCAACATATTCACTAAAGCCACTCCACTCTC-TAGCCAAGTTGTAT 709
consensus_10128#1      TTCTTTGCACTACTTCAACATATTCACTAAAGCCACTCCACTCTC-TAGCCAAGTTGTAT 465
consensus_10128#3      TTCTTTGCACTACTTCAACATATT--GTTGTGCTGTTTT-CGCAA-TCATCCGATTCTTT 374
consensus_10128#2      TCCAGAGGATTA-TTAGGCCTAAAGTAGTGTGTGCTTTTACACAAATGGGCAGGTAAAAC 460
                       * *   * * ** **   * **         *    *   * *   *   *   *     

consensus_10128#0      TATCTCTTACTGAGAACGTCCCTGCAG----------------------------TTGTG 741
consensus_10128#1      TATCTCTTACTGAGAACGTCCCTGCAGGTAATTGCACACTTAACTTATCTCGTAGTTGTG 525
consensus_10128#3      TCTGTCGTGTTATAACTTTTTATTC----------------------------------- 399
consensus_10128#2      GTTCACTTCCTCCAGTTGATTNTTTATGCTATCC-------------TTANCAATCTGAG 507
                         *  * *  *           *                                     

consensus_10128#0      GAGTTTGGTATTGAAGACCTGGGTTATATCCGGTATTATTTGGCACCGAAAATTGAAGAT 801
consensus_10128#1      GAGTTTGGTATTGAAGACCTGNGTTATATCCGGTATTATTTGGCACCGAANATCGAAGAT 585
consensus_10128#3      ------------------------------------------------------------
consensus_10128#2      AACACCACTACTGCTTCATTCCACTTCATCCACCCGTGCC-------------------- 547
                                                                                   

consensus_10128#0      GACGCCGACTAGGATAAATAACTACACTCACAGACTATNTNCTACTTATGTACATNACCA 861
consensus_10128#1      GACGCCGACTAGGATAAATAA--------------------------------------- 606
consensus_10128#3      ------------------------------------------------------------
consensus_10128#2      ------------------------------------------------------------
                                                                                   

consensus_10128#0      TAAATGTAG 870
consensus_10128#1      ---------
consensus_10128#3      ---------
consensus_10128#2      ---------