These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10137#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2350 fasta sequence [TTCTCCATGTTTGTATGCCATGTATGGTTTCACATCTGGACCTCCTGTACAATCTATTCCTGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATATTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAATTAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACATCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAAGGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGACTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCAGATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGGTAAATATATATACTCTTTAACTGGTTCATCACCAGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGAAAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAACCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACATAAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAACAAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCACAATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATCAATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAAATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATAAAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATAAAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATACGAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTCCAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACGAAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA] [+] EMBL AF043418 [TTCTCCATGTTTGTATGCCATGTATGGTTTCACATCTGGACCTCCTGTACAATCTATTCCTGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATATTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAATTAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACATCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAAGGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGACTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCAGATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGGTAAATATATATACTCTTTAACTGGTTCATCACCAGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGAAAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAACCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACATAAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAACAAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCACAATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATCAATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAAATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATAAAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATAAAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATACGAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTCCAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACGAAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA] consensusID : consensus_10137#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2280 fasta sequence [TCTGGACCTCCTGTACAATCTATTCCTGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATATTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAATTAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACATCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAAGGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA-GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGAAAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAACCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACAT-AAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAACAAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCACAATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATCAATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAAATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATAAAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATAAAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATACGAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTCCAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACGAAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA] [+] EMBL AF043416 [TCTGGACCTCCTGTACAATCTATTCCTGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATATTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAATTAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACATCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAAGGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTT GAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGAAAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAACCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACAT AAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAAC ] [+] EMBL AF043417 [ CAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATATTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAATTAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACATCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAAGGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGACTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGAAAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAACCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACAT AAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAACAAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCACAATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATCAATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAAATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATAAAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATAAAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATACGAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTCCAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACGAAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA] [+] EMBL CD168565 [ AGTCATCCTTACTTCATCCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACCAATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTCGGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTTAAGGCTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGGCTTTAAGTCAACAAATTGGTGTGTTAAGGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAAC ] [+] EMBL CD069753 [ AAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGA ] [+] EMBL CD069769 [ AAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAGTTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCGAGATGGACCGAGATATTATCTATCTAAGGTGGACGATAATTTCACACATTCCACAAATGACGAAGAGTTTCCTGTA ] [+] EMBL CD069749 [ AAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTATTACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTTTCAAGTTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGGATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCGAGATGGACCGAGATATTATCTATCTAAGGTGGACGATAATTTCACACATTCCAAAAATGACGAAGAG ] [-] EMBL CD111498 [ ATCACATAAGCGCCCTAAATTCGACATACGAAATTGGTCTGCAAAAATAGGCAATACAAGTTCCGGTGCAAACATTACTGACCAGATTTCA GATATTGGGTCAGTTGTTCATATTCTCCCTTCAATTCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCTA ] [+] EMBL CD069781 [ AGATGTCATGATATTGGGTCAGTTGTTCATATTCTCCCTTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGTGAATGTTCGAGATGGACCGAGATATTATCTATCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAG TTCCT ] [+] EMBL CD171579 [ TGGTTGATAAAAATCCTGTGAATGTTCAAGATGGACCGAGATATTATCTATCTAAGGTGGACGATAATTTCACACATCCCACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGTGAATAATTCGATCTTAGAGTTAAACTGGCCATGTAGTAGAACAGAAACGCCTTATTGTCTAACTGATTCTCCTGGTTTGAGTGACGT ] [+] EMBL CD167496 [ ACAACATGGAAGTTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGTTTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTTCGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAA ] [+] EMBL CD196591 [ GCAGTTCTTCAAATGGTCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGATGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATTAAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAACAAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCACAATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGACCCGCAGACAATCAATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAAATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATAAAGATTCG ] consensusID : consensus_10137#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 275 fasta sequence [AAGTTTAAGTTTGGTTAGTAACTTCGTTCAGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTGTATGTGACTATCTTTCCTGAGTTTCTTTGCAGATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATA] [-] EMBL CD193995 [AAGTTTAAGTTTGGTTAGTAACTTCGTTCAGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATTACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTGTATGTGACTATCTTTCCTGAGTTTCTTTGCAGATGGTTTTAGAAAAATAAATCGTGTGGATCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCATCCGCAATAAAGATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10137#0 TTCTCCATGTTTGTATGCCATGTATGGTTTCACATCTGGACCTCCTGTACAATCTATTCC 60 consensus_10137#1 ----------------------------------TCTGGACCTCCTGTACAATCTATTCC 26 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATA 120 consensus_10137#1 TGCGTTTCTGACCAAATTAAAGTTACTGGTGGATGATGAAGAAACAAACGAACTCATATA 86 consensus_10137#2 ---------------------------------------AAGTTTAAGTTTGGTTAGTAA 21 * ** * * * consensus_10137#0 TTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATT 180 consensus_10137#1 TTGGGATCCGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATT 146 consensus_10137#2 CTTCGTTCAGCACGGGACAAGTTTTCACATACGTGATGGAAACCGCTTAGCCAAAGAATT 81 * * ** *************************************************** consensus_10137#0 ACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGT- 239 consensus_10137#1 ACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGT- 205 consensus_10137#2 ACTACCCCTTTATTTCAAACACAACAATTTATCTAGTTTTATAAGGCAGTTAAATATGTG 141 *********************************************************** consensus_10137#0 --------------------------------ATGGTTTTAGAAAAATAAATCGTGTGGA 267 consensus_10137#1 --------------------------------ATGGTTTTAGAAAAATAAATCGTGTGGA 233 consensus_10137#2 TATGTGACTATCTTTCCTGAGTTTCTTTGCAGATGGTTTTAGAAAAATAAATCGTGTGGA 201 **************************** consensus_10137#0 TCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCAT 327 consensus_10137#1 TCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCAT 293 consensus_10137#2 TCCATCTCTGCCTCTAAAATCTGACACAGAAGACATGGAATTTAGTCATCCTTACTTCAT 261 ************************************************************ consensus_10137#0 CCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACC 387 consensus_10137#1 CCGCAATAAAGATATTTTGCTATCGAAAATTCAGAGGCGGACCTCAAACATGTTCTCACC 353 consensus_10137#2 CCGCAATAAAGATA---------------------------------------------- 275 ************** consensus_10137#0 AATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTC 447 consensus_10137#1 AATAATGGGGTCAAGAAACCAAAGTTTTGGTGTGAAAGTACCTTATGTTCAGGCTAATTC 413 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 GGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTT 507 consensus_10137#1 GGGTTTAAATGGTTCCATAAGTGTATCACCCCAAAGACCAATAACTGCCACAGACTTCTT 473 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAAT 567 consensus_10137#1 AAGACTGGCAGAGACTGTACGGCACTTGCGTTGCAATCAGGAGACTTTAAGTCAACAAAT 533 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACA 627 consensus_10137#1 TAGTGTGTTAAAGTCGGAAAATCAGCTTTTGTATCGTGAACTTTCCGATTTACGAGAACA 593 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAA 687 consensus_10137#1 TCACGACAAGCAGTCCCAACTTATCCAAACACTCTTCACATTCCTGTCAGCCTTTGCAAA 653 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 GGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTAT 747 consensus_10137#1 GGAAGGGAGGTCTGCAAGCGTGTGCATCGGACAAACTAAACGTAAAGCTCTCCCTTCTAT 713 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TACTCCATCCGGTTCAAGACTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTT 807 consensus_10137#1 TACTCCATCCGGTTCAAGATTTCAAAACAAAGAACTAAAGCTGGATCTTCGAAAAGGTTT 773 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGG 867 consensus_10137#1 TCAAATTGAAAGAAACTCGGTTCAACCGCTCCAACTTGTTCAAACTAGCGATTTGCTCGG 833 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 ATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAG 927 consensus_10137#1 ATCACATAAGCGCCCTAAATTCGACATACGAAATTTGTCTGCAAAAATAGGCAATACAAG 893 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TTCCGGTGCAAACATTACTGACCAGATTTCAGATATTGGGTCAGTTGTTCATATTCTCCC 987 consensus_10137#1 TTCCGGTGCAAACATTACTGACCAGATTTCAGATATTGGGTCAGTTGTTCATATTCTCCC 953 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACGGTAAATATATATACTCTTT 1047 consensus_10137#1 TTCAAATCTTCAGCTTACTCCAGTGAGTCTTGGTAATGACG------------------- 994 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AACTGGTTCATCACCAGAGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGT 1107 consensus_10137#1 -----------------AGTGTGACGTAAATACACAAAGTTTGGTTGATAAAAATCCTGT 1037 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 GAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCC 1167 consensus_10137#1 GAATGTTCAAGATGGACCGAGATATTATCTGTCTAAGGTGGACGATAATTTCACACATCC 1097 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 CACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGT 1227 consensus_10137#1 CACAAATGACGAAGAGTTTCCTGTAGGCCTTAATGTTGAGGAAGACGGTGTTACAGATGT 1157 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 GAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCT 1287 consensus_10137#1 GAATAATTCGATTTTAGAGTTAAACTGGCCATGTAGTAGATCAGATACGCCTTATTGTCT 1217 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGA 1347 consensus_10137#1 AACTGATTCTCCTGGTTTGAGTGACGTAATACCTTCAAAGTTAGATGGTGTAACAGATGA 1277 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAA 1407 consensus_10137#1 AAGTATTTGTGACCTGCTTCTTAACGGTGACTCACAAACTGAACAAGAAGTCGGTAACAA 1337 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 CCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACA 1467 consensus_10137#1 CCAGCCTTTCTCAGAATCTACCCTTTCAAAATACAAGAAGGAGCCAATAAGAAAACAACA 1397 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TAAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGT 1527 consensus_10137#1 TAAAATTCAGAATAGACCCCGTTGTATCGCACCTTTTGCTGAAAGCGACCCTCAATTTGT 1457 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTT 1587 consensus_10137#1 TTCCACAACTCTCCAGGACATTGACAGTCTTCCATGGGAGAAGTATCAAGATAGTGGTTT 1517 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 CGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGG 1647 consensus_10137#1 CGACTTCAATCTCGATGTTGAACAAAATCAAACAGAAAATTCACGCAGTTCTTCAAATGG 1577 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGA 1707 consensus_10137#1 TCTTATAGTCGGAAATGAAATTATTCCTGTAGAACCCGCTAATTTAAACGCATGTGATGA 1637 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 TGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATT 1767 consensus_10137#1 TGTTATCCAGTTCTTGAGGTCAGAAATTCCTGGCAAGAAGTTAAAATCAGATGAACCATT 1697 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAAC 1827 consensus_10137#1 AAAAACTGTTGCGACAACTGAGGCACATGCCTCTACTCAAAATGGTGCTATTGATTTAAC 1757 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCAC 1887 consensus_10137#1 AAGTAGTTCATCTGCACCAACTACCTGGAAAGCAAGACTTTCTGCCAACAATCGGCTCAC 1817 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATC 1947 consensus_10137#1 AATATCCTCCTCTCCCAAAGTTAAACGAAAACAAGTGCCAGTTTTGATCCGCAGACAATC 1877 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAA 2007 consensus_10137#1 AATCACCCCTCTTTCAACTCCTGATTTTTGTGAGGAAGAATTGGAATGATGTACAATAAA 1937 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 ATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATA 2067 consensus_10137#1 ATGCTCTTCATTTCATTGTAATTTCTACACAGTAGTTTCCCAAAGAATTTCTTCACGATA 1997 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATA 2127 consensus_10137#1 AAGATTCGCCAAAGTAATATATAATGAACAGCTTCTACGAAACCATTTTCTCCTCACATA 2057 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATAC 2187 consensus_10137#1 AAAGTTTTCTCGTAAGCTCTGTCATAAACAGCGAGTTTCATGATCATGTTGGATGAATAC 2117 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 GAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTC 2247 consensus_10137#1 GAATTTAAAGAACATACACGATTGTTTTTTCTATGAATAACCAAGTTTTAAACATTTCTC 2177 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 CAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACG 2307 consensus_10137#1 CAATGTGTTTATTGATCAGTCTTATCTGTTCATGCAGATTTTAATATATTATGTTTTACG 2237 consensus_10137#2 ------------------------------------------------------------ consensus_10137#0 AAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA 2350 consensus_10137#1 AAGTATCAAAGTGGTGTACCAGATTCTATTAAACAATAATTGA 2280 consensus_10137#2 ------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||