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Schistosoma mansoni
cluster # 10142 cluster # 10142       Sequences # 13       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10142#0 length = 553 sequences # 13  

consensusID : consensus_10142#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 553
fasta sequence
                              [AGTGGAGGGTATTCGTCTTATACGCTACAAGAGCGGGCTCTGTTTGCAAGGTTTCCTGTACGAAAATGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACAGCTTGACTCTATTCCTAACCTTCCAGCCGTACTTCGCAATCGTTTTAGACGACGTCGCAATGCTATTTGTGAC]

[+] EMBL CD183239             [AGTGGAGGGTATTCGTCTTATACGCTACAAGAGCGGGCTCTGTTTGCAAGGTTTCCTGTACGAAAATGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACAGCTTGACTCTATTCCTAACCTTCCAGCCGTACTTCGCAATCGTTTTAGACGACGTCGCAATGCTATTTGTGAC]
[-] EMBL CD201785             [            TCGTCTTATACGCTACAAGGGCGGGCTCTGTTTGCAAGGTTTCCTGTACGAAAATGGTCACTTTTTAGCTATGANAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCCCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCTGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACAGCTTGACCCTATTCCTAACCTTCCAGCCGTACTTCGCAATCGTTTTAGACGACGACGCAATGCTATTTGTG  ]
[+] EMBL BG930772             [                                     gTCTGTTTGCAAGGTTTCCTGTACGAAAGTGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACACACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAG                                                                                                                                                                                                                                                 ]
[+] EMBL CD200778             [                                          TTTG AAGGTTTCCTGTACGAAAATGGACACTTTTTACCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAAAAATACGGACCAGGTACTTGCCGAGTAAAACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAAC                                                                                                                                                                ]
[-] EMBL CD178779             [                                              CAAGGTTTCCTGTACGAAAATGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACAGCTTGACTC                                                                ]
[+] EMBL CD200575             [                                              CAAGGTTTCCTGTACGAAAATGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACCGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGCTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAAC                                                                                                                                                                ]
[-] EMBL CD122255             [                                                                                          TACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAACCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTTTGAGTCTCGACAGCTTGACTC                                                                ]
[-] EMBL CD178506             [                                                                                                            TAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACAGCTTGACTC                                                                ]
[-] EMBL CD159133             [                                                                                                                                                                            CACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGTCTCCTGGTCCACCAACGT                                                                                                                                                              ]
[-] EMBL CD121001             [                                                                                                                                                                            CACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCT AAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGT                                                                                                                                                              ]
[-] EMBL CD120978             [                                                                                                                                                                            CACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTAT                                                                                                                                                                                              ]
[-] EMBL CD120937             [                                                                                                                                                                            CACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTAT                                                                                                                                                                                              ]
[-] EMBL CD136206             [                                                                                                                                                                                                                                                                                CTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTC                                                                                                                                                     ]


>consensus_10142#0 AGTGGAGGGTATTCGTCTTATACGCTACAAGAGCGGGCTCTGTTTGCAAGGTTTCCTGTA CGAAAATGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAA CGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACG GCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGT TGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCC TTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTT TATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTAC TCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACA GCTTGACTCTATTCCTAACCTTCCAGCCGTACTTCGCAATCGTTTTAGACGACGTCGCAA TGCTATTTGTGAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)