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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10142#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 553 fasta sequence
[AGTGGAGGGTATTCGTCTTATACGCTACAAGAGCGGGCTCTGTTTGCAAGGTTTCCTGTACGAAAATGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACAGCTTGACTCTATTCCTAACCTTCCAGCCGTACTTCGCAATCGTTTTAGACGACGTCGCAATGCTATTTGTGAC]
[+] EMBL CD183239 [AGTGGAGGGTATTCGTCTTATACGCTACAAGAGCGGGCTCTGTTTGCAAGGTTTCCTGTACGAAAATGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACAGCTTGACTCTATTCCTAACCTTCCAGCCGTACTTCGCAATCGTTTTAGACGACGTCGCAATGCTATTTGTGAC]
[-] EMBL CD201785 [ TCGTCTTATACGCTACAAGGGCGGGCTCTGTTTGCAAGGTTTCCTGTACGAAAATGGTCACTTTTTAGCTATGANAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCCCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCTGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACAGCTTGACCCTATTCCTAACCTTCCAGCCGTACTTCGCAATCGTTTTAGACGACGACGCAATGCTATTTGTG ]
[+] EMBL BG930772 [ gTCTGTTTGCAAGGTTTCCTGTACGAAAGTGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACACACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAG ]
[+] EMBL CD200778 [ TTTG AAGGTTTCCTGTACGAAAATGGACACTTTTTACCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAAAAATACGGACCAGGTACTTGCCGAGTAAAACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAAC ]
[-] EMBL CD178779 [ CAAGGTTTCCTGTACGAAAATGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACAGCTTGACTC ]
[+] EMBL CD200575 [ CAAGGTTTCCTGTACGAAAATGGTCACTTTTTAGCTATGAAAGTTACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACCGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGCTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAAC ]
[-] EMBL CD122255 [ TACCTACAATAATGCATCTAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAACCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTTTGAGTCTCGACAGCTTGACTC ]
[-] EMBL CD178506 [ TAGAGATACAAACGTTTTAACACGCACTAACAAGAAATACGGACCAAGTACTTGCCGAGTAAGACACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTCCGAGCCCACCACCTACTCCTGTAACGCTTAGTGCTGTTGTGGAAGCCCCAACAAATCCTGTTTCTGAGTCTCGACAGCTTGACTC ]
[-] EMBL CD159133 [ CACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGTCTCCTGGTCCACCAACGT ]
[-] EMBL CD121001 [ CACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCT AAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGT ]
[-] EMBL CD120978 [ CACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTAT ]
[-] EMBL CD120937 [ CACAGACGGCGTAACTGGAGCTCACATACTTCTCGTTTGTCACCATGTATTGAGGAATCATCTAAAGTTGATTGTATGGCAACCAGTTCGCTCAATGGTTCTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTAT ]
[-] EMBL CD136206 [ CTCCTGAACGCTTATCATCGAATCCCCCTTCACTAGAAAGCAGTAGCTCGTGCAGTTTAGCCTCTTGTTATGGGGTATCAGCACCGTTTATCCACCCTTCCATGCCTCCTGGTCCACCAACGTCACCTGTTC ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||