cluster # 10157

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Schistosoma mansoni
cluster # 10157 cluster # 10157 Sequences # 14 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10157#0 length = 992 sequences # 1
consensus_10157#1 length = 978 sequences # 6
consensus_10157#2 length = 478 sequences # 3

consensus_10157#3 length = 476 sequences # 2
consensus_10157#4 length = 332 sequences # 1
consensus_10157#5 length = 218 sequences # 1

consensusID : consensus_10157#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 992
fasta sequence

                              [CTCGNAGGCCANAATTCGGCACGAGGTGTTTTATGGGAAGTAGTATTAGTTGTATCTCAGAGATAGATATGGCTAATAAACTCTTGCCTGCTGCCGTCGTAGCTTCGCGCTCAAAACATTCTGCTACATTGATTTTCTTACATGGATTGGGTGACACAGGGCATGGTTGGTCGGATGCTTTGAAGGAATATGTTCCGGACTACTTCAAGATTATATGTCCTCATGCGAATTCAATACCAGTTACACTTAATGGAGGGATGTGCATGCCAGCATGGTACGACATATATGCTTTAAGTGAAAACGCCAAACAGGATGAAGCAGGAATAAAAGAGGCATCGCTTGAATTAGGAAAATTCGTTGATGCAGAAATAAAAGCCGGAGTCCCCATCGGGAATATAGTTATCGGAGGTTTTTCGCACGGTGGTTCAGTGGCCCTTTATAATGCACTAACGAGCACTTTACAGTATGGTGGGGTTGTTGCTTTCAGTTGTTGGCTTCCACTCCATACAAAATTTATGTCCTCACCCACACTCTTGACTATGCCCAAGGATGTACCAGTTTTCCAGTGTCATGGATTGGAGGATTATACAATTCCCTTTGCCATGGGAAAGCTAACTCATGAGCTTTTAAAAACTTTCCAGTTATCCAAATGTGAACTCAACTGTTATCCTCAATTATCTCACTCATCATGTGAAAAGGAAATGGGAGATCTCCGAACGTTCTTGTCAAAAACATACCTGGTACACAGTAAAATTGGGTGTTATAGGGGTTACTCATTCGTCGTTGCCTAAACTTTCCTGAGAATGAGTTTCAGTTTTTGCCTTTTTCCTCCTTCACTTTCAAGGGACTATTTCCTGGCACATGTTCGAAATGTGGTTTATGACCCCTAACAAGGGTTTTTCTACCGTAAAGGGTAAAGCTCTGCTAAAAGTCCGTACTAGAACTATTATGGGTCTCATTTTGGGTGAATACCACCCCTTAATCCGGAAATT]

[+] EMBL CD079339             [CTCGNAGGCCANAATTCGGCACGAGGTGTTTTATGGGAAGTAGTATTAGTTGTATCTCAGAGATAGATATGGCTAATAAACTCTTGCCTGCTGCCGTCGTAGCTTCGCGCTCAAAACATTCTGCTACATTGATTTTCTTACATGGATTGGGTGACACAGGGCATGGTTGGTCGGATGCTTTGAAGGAATATGTTCCGGACTACTTCAAGATTATATGTCCTCATGCGAATTCAATACCAGTTACACTTAATGGAGGGATGTGCATGCCAGCATGGTACGACATATATGCTTTAAGTGAAAACGCCAAACAGGATGAAGCAGGAATAAAAGAGGCATCGCTTGAATTAGGAAAATTCGTTGATGCAGAAATAAAAGCCGGAGTCCCCATCGGGAATATAGTTATCGGAGGTTTTTCGCACGGTGGTTCAGTGGCCCTTTATAATGCACTAACGAGCACTTTACAGTATGGTGGGGTTGTTGCTTTCAGTTGTTGGCTTCCACTCCATACAAAATTTATGTCCTCACCCACACTCTTGACTATGCCCAAGGATGTACCAGTTTTCCAGTGTCATGGATTGGAGGATTATACAATTCCCTTTGCCATGGGAAAGCTAACTCATGAGCTTTTAAAAACTTTCCAGTTATCCAAATGTGAACTCAACTGTTATCCTCAATTATCTCACTCATCATGTGAAAAGGAAATGGGAGATCTCCGAACGTTCTTGTCAAAAACATACCTGGTACACAGTAAAATTGGGTGTTATAGGGGTTACTCATTCGTCGTTGCCTAAACTTTCCTGAGAATGAGTTTCAGTTTTTGCCTTTTTCCTCCTTCACTTTCAAGGGACTATTTCCTGGCACATGTTCGAAATGTGGTTTATGACCCCTAACAAGGGTTTTTCTACCGTAAAGGGTAAAGCTCTGCTAAAAGTCCGTACTAGAACTATTATGGGTCTCATTTTGGGTGAATACCACCCCTTAATCCGGAAATT]




>consensus_10157#0
CTCGNAGGCCANAATTCGGCACGAGGTGTTTTATGGGAAGTAGTATTAGTTGTATCTCAG
AGATAGATATGGCTAATAAACTCTTGCCTGCTGCCGTCGTAGCTTCGCGCTCAAAACATT
CTGCTACATTGATTTTCTTACATGGATTGGGTGACACAGGGCATGGTTGGTCGGATGCTT
TGAAGGAATATGTTCCGGACTACTTCAAGATTATATGTCCTCATGCGAATTCAATACCAG
TTACACTTAATGGAGGGATGTGCATGCCAGCATGGTACGACATATATGCTTTAAGTGAAA
ACGCCAAACAGGATGAAGCAGGAATAAAAGAGGCATCGCTTGAATTAGGAAAATTCGTTG
ATGCAGAAATAAAAGCCGGAGTCCCCATCGGGAATATAGTTATCGGAGGTTTTTCGCACG
GTGGTTCAGTGGCCCTTTATAATGCACTAACGAGCACTTTACAGTATGGTGGGGTTGTTG
CTTTCAGTTGTTGGCTTCCACTCCATACAAAATTTATGTCCTCACCCACACTCTTGACTA
TGCCCAAGGATGTACCAGTTTTCCAGTGTCATGGATTGGAGGATTATACAATTCCCTTTG
CCATGGGAAAGCTAACTCATGAGCTTTTAAAAACTTTCCAGTTATCCAAATGTGAACTCA
ACTGTTATCCTCAATTATCTCACTCATCATGTGAAAAGGAAATGGGAGATCTCCGAACGT
TCTTGTCAAAAACATACCTGGTACACAGTAAAATTGGGTGTTATAGGGGTTACTCATTCG
TCGTTGCCTAAACTTTCCTGAGAATGAGTTTCAGTTTTTGCCTTTTTCCTCCTTCACTTT
CAAGGGACTATTTCCTGGCACATGTTCGAAATGTGGTTTATGACCCCTAACAAGGGTTTT
TCTACCGTAAAGGGTAAAGCTCTGCTAAAAGTCCGTACTAGAACTATTATGGGTCTCATT
TTGGGTGAATACCACCCCTTAATCCGGAAATT

consensusID : consensus_10157#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 978
fasta sequence

                              [AGTAATAAAACAATGCACGATTAAAATTATACACATATACATGAGAATTTGATATTGCGCTGTATACATACTGAATGAAAGTCGATAGGTTGGCATATACATATACATAAAGGAAATAGTACCTCTAAGAAATAAGACAACAAAAATTATATCATCAGTACACAAACAAATACATTACTAATATCATTGTATGCTGTATGTTAGCAGTTACACAAGGAATTA-GAAATGGTGATAAATGGATGTGTACATATTATGTACACTTTGAATGAATACATAAGATTATACAATAAAACAACGATGATTGTGACGACGTAAACGAGAATGGGCATGATAGT-TAGTGAGATAATGAATTTGGCGATCGTTAAACGCACCTTTACGTTTACTGGGAGTAGATAAAAGAATGAATATGAGCATTGAAATAAAGTAAGGTTAAATCAAATGACATATCAATGGTCATAGAATAAACATATGATGGAAATAATTTACATAGTTGCAAGCGTGAGTCAATTGAAGCTAGACCACCATGGAAAACCTTGAAGCACTGGACGGTCGTTTTGTCCTATTGTGGGACTCCTCAGCAGTGCGCATCCACGACCTCGCCTCGCAAGATTCAAACTCAGGACCTATCAGTCACGCGCAAGAGCACTTAACCGATGCTGATGTTAAAAACTGAATAGTGACTAATGTTCTATTCTGGTTGAATGTTAGTCACATGGACTCCAGATTTATAGAATAATGTGAGGTAACGAACATAAAATAAAATCTGGTCATTTAGACATAACGCTTTTAAATAATCTACACCAACATATTTTTGAATCAAATACGTTATTTGCTCATACATTAAATAGGTATGAGTCTAAGCACAGCATGCGTAACCTGTCTGGTAAATATGCGTACTGAGATCTGGAAGGATTTCTATTACGAAATTTGATATATGTGAACCGTATCTCTTCTCAACGTACTGTCTATTTGTGGCAA]

[+] EMBL CD127477             [AGTAATAAAACAATGCACGATTAAAATTATACACATATACATGAGAATTTGATATTGCGCTGTATACATACTGAATGAAAGTCGATAGGTTGGCATATACATATACATAAAGGAAATAGTACCTCTAAGAAATAAGACAACAAAAATTATATCATCAGTACACAAACAAATACATTACTAATATCATTGTATGCTGTATGTTAGCAGTTACACAAGGAATTA GAAATGGTGATAAATGGATGTGTACATATTATGTACACTTTGAATGAATACATAAGATTATACAATAAAACAACGATGATTGTGACGACGTAAACGAGAATGGGCATGATAGT TAGTGAGATAATGAATTTGGCGATCGTTAAACGCACCTTTACGTTTACTGGGAGTAGATAAAAGAATGAATATGAGCATTGAAATAAAGTAAGGTTAAATCAAATGACATATCAATGGTCATAGAATAAACATATGATGGAAATAATTTACATAGTTGCAAGCGTGAGTCAATTGAAGCTAGACCACCATGGAAAACCTTGAAGCACTGGACGGTCGTTTTGTCCTATTGTGGGACTCCTCAGCAGTGCGCATCCACGACCTCGCCTCGCAAGATT                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD127497             [AGTAATAAAACAATGCACGATTAAAATTATACACATATACATGAGAATTTGATATTGCGCTGTATACATACTGAATGAAAGTCGATAGGTTGGCATATACATATACATAAAGGAAATAGTACCTCTAAGAAATAAGACAACAAAAATTATATCATCAGTACACAAACAAATACATTACTAATATCATTGTATGCTGTATGTTAGCAGTTACACAAGGAATTA GAAATGGTGATAAATGGATGTGTACATATTATGTACACTTTGAATGAATACATAAGATTATACAATAAAACAACGATGATTGTGACGACGTAAACGAGAATGGGCATGATAGT TAGTGAGATAATGAATTTGGCGATCGTTAAACGCACCTTTACGTTTACTGGGAGTAGATAAAAGAATGAATATGAGCATTGAAATAAAGTAAGGTTAAATCAAATGACATATCAATGGTCATAGAATAAACATATGATGGAAATAATTTACATAGTTGCAAGCGTGAGTCAATTGAAGCTAGACCACCATGGAAAACCTTGAAGCACTGGACGGTCGTTTTGTCCTATTGTGGGACTCCTCAGCAGTGCGCATCCACGACCTCGCCTCGCAAGATT                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD127967             [                                                                                                                                                AATTATATTATCAGTACACAAACAAATACATTACTAATATCATTGTATGCTGTATGTTAACAGTTACACAAGGAATTATCAAATGGTGATAAATGGATGTGTACATATTATGTACACCTTGAATGAATACATAAGATTATACAATAAAACAACGATGATTGTGACTACGTAAACGAAAATGGGCATGATAATCTAGTGAGATAATGAATTTGGCGATCGTTAAACGCACCTTTACGTTTACTGGGAGTACATAAAAGAATGAATATGAGCATTGAAATAAAATAAGGTTAAATCAAATGATATATCAATGGTCATAGAATAAACATATGATGGAAATAATTTACATAGTTGCAAGCGTGAGTCAATTGAAGCTAGACCACCATGGAAAACCTTGAAGCACTGGACGGTCGTTTTGTCCTATTGTGGGACTCCTCAGCAGTGCGCATCCACGACCTCGCCTCGCAAGATT                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD113140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCACTGGACGGCCGTTTCGTCCTATTGCGGGACTCTTCAGCAGTGCGCATCCACGACCTCGCCTCGCGAGATCCAAACTCAGGACCTATCAGTCACGCGCAAGAGCACTTAACCGATGCTGATGTTAAAAACTGAATAGTGACTAATGTTCTATTCTGGTTGAATGTTAGTCACATGGACTCCAGATTTATAGAATAATGTGAGGTAACGAACATAAAATAAAATCTGGTCATTTAGACATAACGCTTTTAAATAATCTACACCAACATATTTTTGAATCAAGTACGTTATTTGCTCATACATTAAATAGGTATGAGTCTAAGCACAGCATGCGTAACCTGTCTGGTAAATATGCGTACTGAGATCTGGAAGGATTTCTATTACGAAATTTGATATATGTGAACCGTATCTCTTCTCAACGTACTGTCTATTTGTGGCAA]
[+] EMBL CD113157             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCACTGGACGGCCGTTTCGTCCTATTGCGGGACTCTTCAGCAGTGCGCATCCACGACCTCGCCTCGCGAGATCCAAACTCAGGACTTATCAGTCACGCGCAAGAGCACTTAACCGATGCTGATGTTAAAAACTGAATAGTGACCAATGTTCTATTCTGGTTGAATGTTAGTCACATGGACTCCAGATTTATAGAATAATGTGAGGTGACGAACATAAAATAAAATCTGGTCATTTAGACATAACGCTTTTAAATAATCTACACCAACATATTTTTGAATCAAATACGTTATTTGCTCATACATTAAATAGGTATGAGTCTAAGCACAGCATGCGTAACCTGTCTGGTAAATATGCGTACTGAGATCTGGAAGGATTTCTATTACGAAATTTGATATATGTGAACCGTATCTCTTCTCAACGTACTGTCTATTTGTGGCAA]
[+] EMBL CD113167             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCACTGGACGGCCGTTTCGTCCTATTGCGGGACTCTTCAGCAGTGCGCATCCACGACCTCGCCTCGCGAGATCCAAACTCAGGACCTATCAGTCACGCGCAAGAGCACTTAACCGATGCTGATGTTAAAAACTGAATAGTGACTAATGTTCTATTCTGGTTGAATGTTAGTCACATGGATTCCAGATTTATAGAATAATGTGAGGTAACGAACATAAAATAAAATCTGGTCATTTAGACATAACGCTTTTAAATAATCTACACCAACATATTTTTGAATCAAATACGTTATTTGCTCATACATTAAATAGGTATGAGTCTAAGCACAGCATGCGTAACCTGTCTGGTAAATATGCGTACTGAGATCTGGAAGGATTTCTATTACGAAATTTGATATATGTGAACCGTATCTCTTCTCAACGTACTGTCTATTTGTGGCAA]




>consensus_10157#1
AGTAATAAAACAATGCACGATTAAAATTATACACATATACATGAGAATTTGATATTGCGC
TGTATACATACTGAATGAAAGTCGATAGGTTGGCATATACATATACATAAAGGAAATAGT
ACCTCTAAGAAATAAGACAACAAAAATTATATCATCAGTACACAAACAAATACATTACTA
ATATCATTGTATGCTGTATGTTAGCAGTTACACAAGGAATTAGAAATGGTGATAAATGGA
TGTGTACATATTATGTACACTTTGAATGAATACATAAGATTATACAATAAAACAACGATG
ATTGTGACGACGTAAACGAGAATGGGCATGATAGTTAGTGAGATAATGAATTTGGCGATC
GTTAAACGCACCTTTACGTTTACTGGGAGTAGATAAAAGAATGAATATGAGCATTGAAAT
AAAGTAAGGTTAAATCAAATGACATATCAATGGTCATAGAATAAACATATGATGGAAATA
ATTTACATAGTTGCAAGCGTGAGTCAATTGAAGCTAGACCACCATGGAAAACCTTGAAGC
ACTGGACGGTCGTTTTGTCCTATTGTGGGACTCCTCAGCAGTGCGCATCCACGACCTCGC
CTCGCAAGATTCAAACTCAGGACCTATCAGTCACGCGCAAGAGCACTTAACCGATGCTGA
TGTTAAAAACTGAATAGTGACTAATGTTCTATTCTGGTTGAATGTTAGTCACATGGACTC
CAGATTTATAGAATAATGTGAGGTAACGAACATAAAATAAAATCTGGTCATTTAGACATA
ACGCTTTTAAATAATCTACACCAACATATTTTTGAATCAAATACGTTATTTGCTCATACA
TTAAATAGGTATGAGTCTAAGCACAGCATGCGTAACCTGTCTGGTAAATATGCGTACTGA
GATCTGGAAGGATTTCTATTACGAAATTTGATATATGTGAACCGTATCTCTTCTCAACGT
ACTGTCTATTTGTGGCAA

consensusID : consensus_10157#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 478
fasta sequence

                              [TGTTATTTATGCTTCGCTCGCTGATATTAGCTCATGTGCTTGTAACTTTCTGGCCTGCGTCATTTGTCAATAAAACTGTAGCTGCCGCTTCTCTTTGCCTTCTGATTTTATGCACCGTTAAGACTTGTATTATAACGGTTATGGAGGTGAACGATTAGCGAAGCACGGCACTAAATGCTGACCTTCGTTCCGTTTGCTGGTTTTAGATGATATCGTAACCTCTTCAAACGTAGCATACACAACACCCTTGCCGAGAAGGCAGTGTAGTGGCCATATACACGTGACCATATGAAAGAAATTTGAGAGGGAGAGACGACTCTCCTAACTCTCGGCCATAAGAGGGCATTTGAGGGCTAGTGAGAATGCAGATAAATCCAGCTGACGGTGTTCAATTAAGAAAAAAACACGCGTCTATGACTCCATTTCTAGTTATATTTCATTTATTCTATCATGCAACANATCACAAGAGTAAAACCGT]

[+] EMBL CD199853             [TGTTATTTATGCTTCGCTCGCTGATATTAGCTCATGTGCTTGTAACTTTCTGGCCTGCGTCATTTGTCAATAAAACTGTAGCTGCCGCTTCTCTTTGCCTTCTGATTTTATGCACCGTTAAGACTTGTATTATAACGGTTATGGAGGTGAACGATTAGCGAAGCACGGCACTAAATGCTGACCTTCGTTCCGTTTGCTGGTTTTAGATGATATCGTAACCTCTTCAAACGTAGCATACACAACACCCTTGCCGAGAAGGCAGTGTAGTGGCCATATACACGTGACCATATGAAAGAAATTTGAGAGGGAGAGACGACTCTCCTAACTCTCGGCCATAAGAGGGCATTTGAGGGCTAGTGAGAATGCAGATAAATCCAGCTGACGGTGTTCAATTAAGAAAAAAACACGCGTCTATGACTCCATTCCTAGTTATATTTCATTTATTCTATCATGCAACANATCACAAGAGTAAAACCGT]
[+] EMBL CD199830             [TGTTATTTATGCTTCGCTCGCTGATATTAGCTCATGTGCTTGTAACTTTCTGGCCTGCGTCATTTGTCAATAAAACTGTAGCTGCCGCTTCTCTTTGCCTTCTGATTTTATGCACCGTTAAGACTTGTATTATAACGGTTATGGAGGTGAACGATTAGCGAAGCACGGCACTAAATGCTGACCTTCGTTCCGTTTGCTGGTTCTAGATGATATCGTAACCTCTTCAAACGTAGCATACACAACACCCTTGCCGAGAAGGCAGTGTAGTGGCCATATACACGTGACCATATGAAAGAAATTTGAGAGGGAGAGACGACTCTCCTAACTCTCGGCCATAAGAGGGCATTTGAGGGCTAGTGAGAATGCAGATAAATCCAGCTGACGGTGTTCAATTAAGAAAAAAATACGCGTCTATGACTCCATTTCTAGTTATATNTCATTTATTCTATCATGCAACANATCACAAGA          ]
[+] EMBL CD199881             [TGTTATTTATGCTTCGCTCGCTGATATTAGCTCATGTGCTTGTAACTTTCTGGCCTGCGTCATTTGTCAATAAAACTGTAGCTGCCGCTTCTCTTTGCCTTCTGATTTTATGCACCGTTAAGACTTGTATTATAACGGTTATGGAGGTGAACGATTAGCGAAGCACGGCACTAAATGCTGACCTTCGTTCCGTTTGCTGGTTTTAGATGATATCGTAACCTCTTCAAACGTAGCATACACAACACCCTTGCCGAGAAGGCAGTGTAGTGGCCATATACACGTGACCATATGAAAGAAATTTGAGAGGGAGAGACGACTCTCCTAACTCTCGGCCATAAGAGGGCATTTGAGGGCTAGTGAGAATGCAGATAAATCCAGCTGACGGTGTTCAATTAAGAAAAAAACACGCGTCTATGACTCCATTTCTAGTTATATTTCATTTATTCTATCATGCAACAAATCACAAGA          ]




>consensus_10157#2
TGTTATTTATGCTTCGCTCGCTGATATTAGCTCATGTGCTTGTAACTTTCTGGCCTGCGT
CATTTGTCAATAAAACTGTAGCTGCCGCTTCTCTTTGCCTTCTGATTTTATGCACCGTTA
AGACTTGTATTATAACGGTTATGGAGGTGAACGATTAGCGAAGCACGGCACTAAATGCTG
ACCTTCGTTCCGTTTGCTGGTTTTAGATGATATCGTAACCTCTTCAAACGTAGCATACAC
AACACCCTTGCCGAGAAGGCAGTGTAGTGGCCATATACACGTGACCATATGAAAGAAATT
TGAGAGGGAGAGACGACTCTCCTAACTCTCGGCCATAAGAGGGCATTTGAGGGCTAGTGA
GAATGCAGATAAATCCAGCTGACGGTGTTCAATTAAGAAAAAAACACGCGTCTATGACTC
CATTTCTAGTTATATTTCATTTATTCTATCATGCAACANATCACAAGAGTAAAACCGT

consensusID : consensus_10157#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 476
fasta sequence

                              [CGGTGACTGGTGTCGAGCTGGTTGGTGTGTCTGATGGTGTTGCACGAGGTCGAGGTCGTCTTCTCCTCTTACCAGACTTGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGGAAGGCGATGCTGTGTCTGGTGTCGCTCCAGGTTCTGTAAACGGAAGAGAATGAAACAGATTGACGTGATAGTAATTTGTGTGTTGTCGGATGTTGGAGGAGGCTGTGACAATGACAGTTGCAGTGTGACATCTGCATGTGGTTGAAGAGTTCGTCTGTGTGTGAGAGAGACGAGTGGCTCACGTGTGTGCATTGTGTGCAGTTGCTGTCAGTTGTGATGATCGAGTGTGTATATGTGGATGAGATGGTGGAGTGGTAAAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAACCGGAACGGGAA]

[+] EMBL CD134547             [CGGTGACTGGTGTCGAGCTGGTTGGTGTGTCTGATGGTGTTGCACGAGGTCGAGGTCGTCTTCTCCTCTTACCAGACTTGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTGTACTGGAAGGCGATGCTGTGTCTGGTGTCGCTCCAGGTTCTGTAAACGGAAGAGAATGAAACAGATTGACGTGATAGTAATTTGTGTGTTGTCGGATGTTGGAGGAGGCTGTGACAATGACAGTTGCAGTGTGACATCTGCATGTGGTTGAAGAGTTCGTCTGTGTGTGAGAGAGACGAGTGGCTCACGTGTGTGCATTGTGTGCAGTTGCTGTCAGTTGTGATGATCGAGTGTGTATATGTGGATGAGATGGTGGAGTGGTAAAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAACCGGAACGGGAA]
[+] EMBL CD089610             [                                                               TCCTCTTACCAGACTTGTCGATGTAGTACATGTACAGATCGTCCCCGTCCGGTGTTGTACTGGAAGGCGATGCTGCGTCTGGTGTCGCTCCAGGTTCTGTTAACGGAATAGAATGAAACAGATTGACGTGATAGTAATTTGTGTGTCGTCGGATGTTGGAGGAGGCTGTGACAATGACAGTTGCAGAGTGACA                                                                                                                                                                                                                            ]




>consensus_10157#3
CGGTGACTGGTGTCGAGCTGGTTGGTGTGTCTGATGGTGTTGCACGAGGTCGAGGTCGTC
TTCTCCTCTTACCAGACTTGTCAATGTAGTAGATGTAGAGATCGTCGTCGTCCGGTGTTG
TACTGGAAGGCGATGCTGTGTCTGGTGTCGCTCCAGGTTCTGTAAACGGAAGAGAATGAA
ACAGATTGACGTGATAGTAATTTGTGTGTTGTCGGATGTTGGAGGAGGCTGTGACAATGA
CAGTTGCAGTGTGACATCTGCATGTGGTTGAAGAGTTCGTCTGTGTGTGAGAGAGACGAG
TGGCTCACGTGTGTGCATTGTGTGCAGTTGCTGTCAGTTGTGATGATCGAGTGTGTATAT
GTGGATGAGATGGTGGAGTGGTAAAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTC
CAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAACCGGAACGGGAA

consensusID : consensus_10157#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 332
fasta sequence

                              [GAGCGGCAACTACAATTTTATTGGCAAATGATGCAGGCCAGAAAGTTATAAGCACATGAGCAAATATCAGCGAGCGAAGCATAAATGACACGCATCGGGGATAGCTGTTAAGCCAACTCGCTTTAACCAAGCGTTAATCGATATTTATAGTCAGATATAAATAAATGACAGACATGTGATAAATAGAGTAAGAAATGTGCACACACATGCGCTCAAATAAAAACAGTCAGGGTTGTTAAGTGAATAATTAACAAGGTCAAAACGTGACTCATGATGTGTAGGTAAATTGGCTTGTCCTGAAGCTATAATAAAGTAACATAACATATTTACCG]

[+] EMBL CD067404             [GAGCGGCAACTACAATTTTATTGGCAAATGATGCAGGCCAGAAAGTTATAAGCACATGAGCAAATATCAGCGAGCGAAGCATAAATGACACGCATCGGGGATAGCTGTTAAGCCAACTCGCTTTAACCAAGCGTTAATCGATATTTATAGTCAGATATAAATAAATGACAGACATGTGATAAATAGAGTAAGAAATGTGCACACACATGCGCTCAAATAAAAACAGTCAGGGTTGTTAAGTGAATAATTAACAAGGTCAAAACGTGACTCATGATGTGTAGGTAAATTGGCTTGTCCTGAAGCTATAATAAAGTAACATAACATATTTACCG]




>consensus_10157#4
GAGCGGCAACTACAATTTTATTGGCAAATGATGCAGGCCAGAAAGTTATAAGCACATGAG
CAAATATCAGCGAGCGAAGCATAAATGACACGCATCGGGGATAGCTGTTAAGCCAACTCG
CTTTAACCAAGCGTTAATCGATATTTATAGTCAGATATAAATAAATGACAGACATGTGAT
AAATAGAGTAAGAAATGTGCACACACATGCGCTCAAATAAAAACAGTCAGGGTTGTTAAG
TGAATAATTAACAAGGTCAAAACGTGACTCATGATGTGTAGGTAAATTGGCTTGTCCTGA
AGCTATAATAAAGTAACATAACATATTTACCG

consensusID : consensus_10157#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 218
fasta sequence

                              [CCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCGAACACAGACACACGTTCCGATTCACTGAACCGGTGACTGGTGTCGAGCTGGTTGGTGTGTCTGATGGTGTTGCACGAGGTCGAGGTCGTCTTCTCCTCTTACCAGACTTGTCAATGTAGTAGATGTAGAGATCGTCGCCTTCCAGTACAACACCGGACGA]

[+] EMBL CD135313             [CCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCGAACACAGACACACGTTCCGATTCACTGAACCGGTGACTGGTGTCGAGCTGGTTGGTGTGTCTGATGGTGTTGCACGAGGTCGAGGTCGTCTTCTCCTCTTACCAGACTTGTCAATGTAGTAGATGTAGAGATCGTCGCCTTCCAGTACAACACCGGACGA]




>consensus_10157#5
CCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCGAA
CACAGACACACGTTCCGATTCACTGAACCGGTGACTGGTGTCGAGCTGGTTGGTGTGTCT
GATGGTGTTGCACGAGGTCGAGGTCGTCTTCTCCTCTTACCAGACTTGTCAATGTAGTAG
ATGTAGAGATCGTCGCCTTCCAGTACAACACCGGACGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10157#3      ------------------------------------------------------------
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      AGTAATAAAACAATGCACGATTAAAATTATACACATATACATGAGAATTTGATATTGCGC 60
consensus_10157#4      ------------------------------------------------------------
consensus_10157#2      ------------------------------------------------------------
consensus_10157#0      ----------------------------------------CTCGNAGGCCANAATTCGGC 20
                                                                                   

consensus_10157#3      ------------------------------------------------------------
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      TGTATACATACTGAATGAAAGTCGATAGGTTGGCATATACATATACATAAAGGAAATAGT 120
consensus_10157#4      ------------------------------------------------------------
consensus_10157#2      ------------------------------------------------------------
consensus_10157#0      ACGAGGTGTTTTATGGGAAGTAGTATTAGTTGTATCTCAGAGATAGATATGGCTAATAAA 80
                                                                                   

consensus_10157#3      ------------------------------------------------------------
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      ACCTCTAAGAAATAAGACAACAAAAATTATATCATCAGTACACAAACAAATACATTACTA 180
consensus_10157#4      ------------------------------------------------------------
consensus_10157#2      ------------------------TGTTATTTATGCTTCGCTCGCTGATATTAGCTCATG 36
consensus_10157#0      CTCTTGCCTGCTGCCGTCGTAGCTTCGCGCTCAAAACATTCTGCTACATTGATTTTCTTA 140
                                                                                   

consensus_10157#3      ------------------------------------------------------------
consensus_10157#5      ----------------------------------------CCGTTCCGGTTGTGCTGCAG 20
consensus_10157#1      ATATCATTGTATGCTGTATGTTAGCAGTTACACAAGGAATTAGAAATGGTGATAAATGGA 240
consensus_10157#4      ------------------------------------------GAGCGGCAACTACAATTT 18
consensus_10157#2      TGCTTGTAACTTTCTGGCCTGCGTCATTTGTCAATAAAACTGTAGCTGCCGCTTCT-CTT 95
consensus_10157#0      CATGGATTGGGTGACACAGGGCATGGTTGGTCGGATGCTTTGAAGGAATATGTTCCGGAC 200
                                                                                   

consensus_10157#3      ------------------------------------------------------------
consensus_10157#5      TCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCGAACACAGACACACGTTCCGATT 80
consensus_10157#1      TGTGTACATATTATGTACACTTTGAATGAATACATAAGATTATACAATAAAACAACGATG 300
consensus_10157#4      TATTGGCAAATGATGCAGGCC------AGAAAGTTATAAGCACATGAGCAAATATCAGCG 72
consensus_10157#2      TGCCTTCTGATTTTATGCACCGTTA--AGACTTGTATTATAACGGTTATGGAGGTGAACG 153
consensus_10157#0      TACTTCAAGATTATATGTCCTCATGCGAATTCAATACCAGT-TACACTTAATGGAGGGAT 259
                                                                                   

consensus_10157#3      ---------CG-GTGACTGGTGTCGAGC-TGGTTGGTGTGTCTGATGGTG----TTGCAC 45
consensus_10157#5      CACTGAAC-CG-GTGACTGGTGTCGAGC-TGGTTGGTGTGTCTGATGGTG----TTGCAC 133
consensus_10157#1      ATTGTGAC-GACGTAAACGAGAATGGGC-ATGATAGTTAGTGAGATAATGA--ATTTGGC 356
consensus_10157#4      AGCGAAGCATAAATGACACGCATCGGGGATAGCTGTTAAGCCAACTCGCT----TTAACC 128
consensus_10157#2      ATTAGCGA-AGCACGGCACTAAATGCTGACCTTCGTTCCGTTTGCTGGTT----TTAGAT 208
consensus_10157#0      GTGCATGCCAGCATGGTACGACATATATGCTTTAAGTGAAAACGCCAAACAGGATGAAGC 319
                                                           *                 *     

consensus_10157#3      GAG-GTCGAGGTCGTCTTCTCCT--CTTACCAGACTTGTCAATGTAGTAGATGTAGAGAT 102
consensus_10157#5      GAG-GTCGAGGTCGTCTTCTCCT--CTTACCAGACTTGTCAATGTAGTAGATGTAGAGAT 190
consensus_10157#1      GATCGTTAAACGCACCTTTACGT--TTACTGGGAGTAGATAAAAGAATGAATATGAGCAT 414
consensus_10157#4      AAGCGTTAATCGATATTTATAGT--CAGATATAAATAAATGACAGACATGTGATAAATAG 186
consensus_10157#2      GATATCGTAACCTCTTCAAACGTAGCATACACAACACCCTTGCCGAGAAGGCAGTGTAGT 268
consensus_10157#0      AGGAATAAAAGAGGCATCGCTTGAATTAGGAAAATTCGTTGATGCAGAAATAAAAGCCGG 379
                               *                        *           *              

consensus_10157#3      CGTCGTCGTCCGGTGTT-GTACTGGAAGGCGATGCTGTGTCTGGTGTCGCTCCAGGTTCT 161
consensus_10157#5      CGTCGCCTTCCAGTACA-ACACCGGACGA------------------------------- 218
consensus_10157#1      TGAAATAAAGTAAGGTT-AAATCAAATGACA------TATCAATGGTCATAGAATAAACA 467
consensus_10157#4      AGTAAGAAATGTGCACACACATGCGCTCAAATAAAAACAGTCAGGGTTGTTAAGTGAATA 246
consensus_10157#2      GGCCATATACACGTGACCATATGAAAGAAATTTGAGAGGGAGAGACGACTCTCCTAACTC 328
consensus_10157#0      AGTCCCCATCGGGAATATAGTTATCGGAGGTTT----TTCGCACGGTGGTTCAGTGGCCC 435
                        *                                                          

consensus_10157#3      GTAAACG-GAAGAGAATGAAACAGATTGACGTG-ATAGTAATTTGTGTGTTGTCGGATGT 219
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      TATGATG-GAAATAATTTACATAGTTGCAAGCG-TGAGTCAATTGAAGCTAGACCACCAT 525
consensus_10157#4      ATTAACA-AGGTCAAAACGTGACTCATGATGTG-TAGGTAAATTG--GCTTGTCCTGAAG 302
consensus_10157#2      TCGGCCATAAGAGGGCATTTGAGGGCTAGTGAG-AATGCAGATAAATCCAGCTGACGGTG 387
consensus_10157#0      TTTATAATGCACTAACGAGCACTTTACAGTATGGTGGGGTTGTTGCTTTCAGTTGTTGGC 495
                                                                                   

consensus_10157#3      TGGAGGAGGCTGTGACAATGACAGTTGCAGTGTGACATCTGCATGTGGTTGAAGAGTTCG 279
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      GGAAAACCTTGAAGCACTGGACGGTCGTTTTGTCCTATTGTGGGACTCCTCAGCAGTGCG 585
consensus_10157#4      CTATAATAAAGTAACATAACATATTTACCG------------------------------ 332
consensus_10157#2      TTCAATTAAGAAAAAAACACGCGTCTATGACTCCATTTCTAGTTATATTTCATTTATTCT 447
consensus_10157#0      TTCCACTCCATACAAAATTTATGTCCTCACCCACACTCTTGACTATGCCCAAGGATGTAC 555
                                                                                   

consensus_10157#3      TCTGTGTGTGAGAGAGACGAGTGGCTCACGTGTGTGCATTGTGTGCAGTTGCTGTCAGTT 339
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      CATCCACGACCTCGCCTCGCAAGATTCAAACTCAGGACCTAT---CAGTCACGCGCAAGA 642
consensus_10157#4      ------------------------------------------------------------
consensus_10157#2      ATCATGCAACANATCACAAGAGTAAAACCGT----------------------------- 478
consensus_10157#0      CAGTTTTCCAGTGTCATGGATTGGAGGATTATACAATTCCCTTTGCCATGGGAAAGCTAA 615
                                                                                   

consensus_10157#3      GTGATGATCGAGTGTGTATATGTGGATGAGATGGTGGAGTGGTAAAACAGGTTGAATCGG 399
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      GCACTTAACCGATGCTGATGTTAAAAACTGAATAGTGACTAATGTTCTATTCTGGTTGAA 702
consensus_10157#4      ------------------------------------------------------------
consensus_10157#2      ------------------------------------------------------------
consensus_10157#0      CTCATGAGCTTTTAAAAACTTTCCAGTTATCCAAATGTGAACTCAACTGTTATCCTCAAT 675
                                                                                   

consensus_10157#3      AACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGCA- 458
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      TGTTAGTCACATGGACTCCAGATTTATAGAATAATGTGAGGTAACGAACATAAAATAAA- 761
consensus_10157#4      ------------------------------------------------------------
consensus_10157#2      ------------------------------------------------------------
consensus_10157#0      TATCTCACTCATCATGTGAAAAGGAAATGGGAGATCTCCGAACGTTCTTGTCAAAAACAT 735
                                                                                   

consensus_10157#3      GCACAACCGGAACGGGAA------------------------------------------ 476
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      ATCTGGTCATTTAGACATAACGCTTTTAAATAATCTACACCAACATATTTTTGAATCAAA 821
consensus_10157#4      ------------------------------------------------------------
consensus_10157#2      ------------------------------------------------------------
consensus_10157#0      ACCTGGTACACAGTAAAATTGGGTGTTATAGGGGTTACTCATTCGTCGTTGCCTAAACTT 795
                                                                                   

consensus_10157#3      ------------------------------------------------------------
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      TACGTTATTTGCTCATACATTAAATAGGTATGAGTCTAAGCACAGCATGCGTAACCTGTC 881
consensus_10157#4      ------------------------------------------------------------
consensus_10157#2      ------------------------------------------------------------
consensus_10157#0      TCCTGAGAATGAGTTTCAGTTTTTGCCTTTTTCCTCCTTCACTTTCAAGGGACTATTTCC 855
                                                                                   

consensus_10157#3      ------------------------------------------------------------
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      TGGTAAATATGCGTACTGAGATCTGGAAGGATTTCTATTACGAAATTTGATATATGTGAA 941
consensus_10157#4      ------------------------------------------------------------
consensus_10157#2      ------------------------------------------------------------
consensus_10157#0      TGGCACATGTTCGAAATGTGGTTTATGACCCCTAACAAGGGTTTTTCTACCGTAAAGGGT 915
                                                                                   

consensus_10157#3      ------------------------------------------------------------
consensus_10157#5      ------------------------------------------------------------
consensus_10157#1      CCGTATCTCTTCTCAACGTACTGTCTATTTGTGGCAA----------------------- 978
consensus_10157#4      ------------------------------------------------------------
consensus_10157#2      ------------------------------------------------------------
consensus_10157#0      AAAGCTCTGCTAAAAGTCCGTACTAGAACTATTATGGGTCTCATTTTGGGTGAATACCAC 975
                                                                                   

consensus_10157#3      -----------------
consensus_10157#5      -----------------
consensus_10157#1      -----------------
consensus_10157#4      -----------------
consensus_10157#2      -----------------
consensus_10157#0      CCCTTAATCCGGAAATT 992