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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10158#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1648 fasta sequence
[AAGTTTAGATAAGCGTCGATCAGCCGGAGCATAAACATTAAGAATATAATCGGTGAGCATAGGTGTCAGATTTGGATTGTTCGTTAAAATTGCTAGAAGCATATCGTTGAATAGTTCCAACTGGGTAACGGTAGGTCCTTCGTTCCTTGGAGATCGATGGTACGGAACCGAAGTGGTCAAATACTTGTATTCAAGATCATCCGAACTTAGTTCAGATCGTCCAATCAAATGACCAGAAGCTGAGTGTGTTAAAGTGGTAGGTATTGAAGGGAATTCAAATTGGGATGATGTAGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGGTCCTTCCGATTTTCTTCCGGCCCATTTTCGAAGACGAGCAATGGCAATAGCTCGAGCAGACATAATTGCGGGACAGTGAATTGTATGATCATCTTTATCGGAAAAATTGTTTACGTCATGTTTATTATTTGAAGAAATGGATGCAATGTGGACAGGATTACTTTGATCTGACTGATAAGTTGTTCCTGAAGTATCCTTTGAAAATGTACTCAGCTTTCGCAAACGTCTTTTTATTGCAACTGTTGCAGATGACGTTGCAGCAACCGCTGCTTGAGCTGCCGACTGCGCACGTAAAATGAACGGTGGAGCTTCTTTTTGAACAGAATTCGGTGGCGATCCCATATTTTCAAATACTAGGTTTCGCCCAAATGTGGACGCTTCATCATAGTCTTTTACCAACAGAGAATTTGACAGTAACTGGATATGACTATCTGGTGGTATACTTAAACGTCTCCGACGCTCCAGACGGCGATGCAATTCATTCAAGCGTGCAATAAAAATATCTTTCTGTTCCTGTTCAAAATCCAGTTCTTCTCTATATGCTAACTCTTGAACAAGGATAGCAGAGTATTCTCGTACACAAGATTCTAGCTCTTCTAATAATGCATTGAGTTCATTCAGAGAAAGATCTTGCATAGCTTCTTCAGGAAGCCAATCACTTCCGATATTTTCTATCCCAAGTGGACGTTTATACTCCGACTGAACCATATTGCACAGTGACAAAGGGATATCCTCATTATCATTCATAAGGATATCAATTTCCTTAATGATTTCGTCGGCGGTTTGGACGATGTCATCGTATGAATCAGGCAACTGAGATGTTACTAACGAATGGTGGTCGAATGCATAACTAATGGCTTCATCTTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTGTTCCTTGATATCCAAAGCTTCTAAAACAACTCCATACAAACACGTCCCAAACCAATGTACTGGTGGAAATGTGTAATGACTGAGTAGTGGACCCAAATATTCTCTGGAATCAAACGATTGCGTCTTATCCTTAAGTTTAACCTGATCGTTTAAATCTTTGAAAACACCATCAAACGTGAAGCACCTTGCGATTTCCTCACTGAAAGCTGTAGTTAAATCATTGGTCATGTTGCGGTCTCCGGAGACTAAATAATGTGTTTTCTCAATATTTCACTGCTGCGTGTCGTTTTGGCACATAGCCCGGAAAAAACAAATGGTAGGGAAACAT]
[-] EMBL CD202169 [AAGTTTAGATAAGCGTCGATCAGCCGGAGCATAAACATTAAGAATATAATCGGTGAGCATAGGTGTCAGATTTGGATTGTTCGTTANAATTGCTAGAAGCATATCGTTGAATAGTTCCAACTGGGTAACGGTAGGTCCTTCGTTCCTTGGAGATCGATGGTACGGAACCGAAGTGGTCAAATACTTGTATTCAAGATCATCCGAACTTAGTTCAGATCGTCCAATCAAATGACCAGAAGCTGAGTGTGTTAAAGTGGTAGGTATTGAAGGGAATTCAAATTGGGATGATGTAGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGG ]
[+] EMBL CD184700 [ TAAGAATATAATCGGTGAGCATAGGTGTCAGATTTGGATTGTTCGTTAAAATTGCTAGAAGCATATCGTTGAATAGTTCCAACTGGGTAACGGTAGGTCCTTCGTTCCTTGGAGATCGATGGTACGGAACCGAAGTGGTCAAATACTTGTATTCAAGATCATCCGAACTTAGTTCAGATCGTCCAATCAAATGACCAGAAGCTGAGTGTGTTAAAGTGGTAGGTATTGAAGGGAATTCAAATTGGGATGATGTAGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGGTCCTTCCGATTTTCTTCCGGCCCATTTTCGAAGACGAGCAATGGCAATAGCTCGAGCAGACATAATTGCGGGACAGTGAATTGTATGATC ]
[+] EMBL CD184883 [ TAAGAATATAATCGGTGAGCATAGGTGTCAGATTTGGATTGTTCGTTAAAATTGCTAGAAGCATATCGTTGAATAGTTCCAACTGGGTAACGGTAGGTCCTTCGTTCCTTGGAGATCGATGGTACGGAACCGAAGTGGTCAAATACTTGTATTCAAGATCATCCGAACTTAGTTCAGATCGTCCAATCAAATGACCAGAAGCTGAGTGTGTTAAAGTGGTAGGTATTGAAGGGAATTCAAATTGGGATGATGTTGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGGTCCTTCCGATTTTCTTCCGGCCCATTTTCGAAGACGAGCAATGGCAATAGCTCGAGCAGACATA ]
[+] EMBL CD195198 [ TGGTAGGTATTGAAGGGAATTCAAATTGGGATGATGTAGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGGTCCTTCCGACTTTCTTCCGGCCCATTTTCGAAGACGAGCAATGGCAATAGCTCGAGCAGACATAATTGCGGGACAGTGAATTGTATGATCATCTTTATCGGAAAAATTGTTTACGTCATGTTTATTATTTGAAGAAATGGATGCAATGTGGACAGGATTACTTTGATCTGACTGATAAGTTGTTCCTGAAGTATCCT ]
[-] EMBL BG932600 [ ATGTAGGACTAGTTACTGCTGAACGAGCTTCTCGACTACGGACAAACGAGTTTATTGGGACTTCTGCTTGATGACGCCCACGACGAAGAAAAGCCCTGAAAGTCCCGGTGTTCTCAGTTTTCGAAGGTCCTTCCGATTTTCTTCCGGCCCATTTTCGAAGACGAGCAATGGCAATAGCTCGAGCAGACATAATTGCGGGACAGTGAATTGTATGATCATCTTTATCGGAAAAATTGTTTACGTCATATTTATTATTTGAAGAAATGGATGCAATGTGGACAGGATTACTTTGATCTGACTGATAAGTTGTTCCTGAAGTATCCTTTGAAAATGTACTCAGCTTTCGCAAACGTCTTTTTATTGCAACTGTTGCAGATGACGTTGCAGCAACCGCTGCTTGAGCTGCCGACTGCGCACGTAAAATGAACGGTGGAGCTTCT ]
[+] EMBL CD066689 [ TCTGACTGATAAGTTGTTCCTGAACTATCCTTTGAAAATGTACTCAGCTTTCACAAACGTCTTTTTATTGCAACTGTTGCAGATGACTTTGCAACAGCCGCTGCTTGAGCTGCCGACTGCGCACGTAAAATGAACGGCGGAGCTTCTTTTTGAACAGAATTCGGTGGCGATCCCATATTTTCAAATACTAGGTTTCGCCCAAATGTGGACGCT ]
[+] EMBL CD094550 [ TGAACGGTGGAGCTTCTTTTTGAACAGAATTCGGTGGCGATCCCATATTTTCAAATACTAGGTTTCGCCCAAATGTGGACGCTTCATCATAGTCTTTTACCAACAGAGAATTTGACAGTAACTGGATATGACTATCTGGTGGTATACTTAAACGTCTCCGACGCTCCAGACGGCGGTGCAATTCATTCAAGCGTGCAATAAAAATATCTATCTGTTCCTGTTCAAAATCCAGTTCTTCTCTATATGCTAACTCTTGAACAAGGATAGCAGAGTATTCTCGTACACAAGATTCTAGCTCTTCTAATAATGCATTGAGTTCATTCAGAGAAAGATCTTGCATAGCTTCTTCAGGAAGCCAATCACTTCCGATATTTTCTATCCCAAGTGGACGTTTATACTCCGACTGAACCATATTGCACAGTGACAAAGGGATATCCTCATTATCATTCATAAGGTTATCAATTTCCTTAATGATTTCGTCGGCGGTTTGGACGATGTCATCGTATGAATCAGGCAACTGAGATGTTACTAACGAATGGTGGTCGAATGCATAACTAATGGCTTCATCTTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTG ]
[+] EMBL CD094737 [ TGAACGGTGGAGCTTCTTTTTGAACAGAATTCGGTGGCGATCCCATATTTTCGAATACTAGGTTTCGCCCAAATGTGGACGCTTCATCATAGTCTTTTACCAACAGAGAATTTGACAGTAACTGGATATGACTATCTGGTGGTATACTTAAACGTCTCCGACGCTCCAGACGGCGATGCAATTCATTCAAGCGTGCAATAAAAATATCTTTCTGTTCCTGTTCAAAATCCAGTTCTTCTCTATATGCTAACTCTTGAACAAGGATAGCAGAGTATTCTCGTACACAAGATTCTAGCTCTTCTAATAATGCATTGAGTTCATTCAGAGAAAGATCTTGCATAGCTTCTTCAGGAAGCCAATCACTTCCGATATTTTCTATCCCAAGTGGACGTTTATACTCCGACTGAACCATATTGCACAGTGACAAAGGGATATCCTCATTATCATTCATAAGGATATCAATTTCCTTAATGATTTCGTCGGCGGTTTGGACGATGTCATCGTATGAATCAGGCAACTGAGATGTTACTAACGAATGGTGGTCGAATGCATAACTAATGG ]
[+] EMBL CD094491 [ TGAACGGTGGAGCTTCTTTTTGAACAGAATTCGGTGGCGATCCCATATTTTCAAATACTAGGTTTCGCCCAAATGTGGACGCTTCATCATAGTCTTTTACCAACAGAGAATTTGACAGTAACTGGATATGACTATCTGGTGGTATACTTAAACGTCTCCGACGCTCCAGACGGCGATGCAATTCATTCAAGCGTGCAATAAAAATATCTTTCTGTTCCTGTTCAAAATCCAGTTCTTCTCTATATGCTAACTCTTGAACAAGGATAGCAGAGTATTCTCGTACACAAGATTCTAGCTCTTCTAATAATGCATTGAGTTCATTCAGAGAAAGATCTTGCATAGCTTCTTCAGGAAGCCAATCACTTCCGATATTTTCTATCCCAAGTGGACGTTTATACTCCGACTGAACCATATTGCACAGTGACAAAGGGATATCCTCATTATCATTCATAAGGATATCAATTTCCTTAATGATTTCGTCGGCGGTTTGGACGATGTCAT ]
[-] EMBL CD095345 [ GCGATGCAATTCATTCAAGCGTGCAATAAAAATATCTNTCTGTTCCTGTTCAAAATCCAGTTCTTCTCTATATGCTAACTCTTGAACAAGGATAGCAGAGTATTCTCGTACACAAGATTCTAGCTCTTCTAATAATGCATTGAGTTCATTCAGAGAAAGATCTTGCATAGCTTCTTCAGGAAGCCAATCACTTCCGATATTTTCTATCCCAAGTGGACGTTTATACTCCGACTGAACCATATTGCACAGTGACAAAGGGATATCCTCATTATCATTCATAAGGATATCAATTTCCTTAATGATTTCGTCGGCGGTTTGGACGATGTCATCGTATGAATCAGGCAACTGAGATGTTACTAACGAATGGTGGTCGAATGCATAACTAATGGCTTCATCTTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTGT ]
[-] EMBL CD129932 [ TCAGGCAACTGAGATGTTACTAACGAATGGTGGTCGAATGCATAACTAATGGCTTCATCTTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTGTTCCTTGATATCCAAAGCTTCTAAAACAACTCCATACAAACACGTCCCAAACCAATGTACTGGTGGAAATGTGTAATGACTGAGTAGTGGACCCAAATATTCTCTGGAATCAAACGATTGCGTCTTATCCTTAAGTTTAACCTGATCGTTTAAATCTTTGAAAACACCATCAAACGTGAAGCACCTTGCGATTTCCTCACTGAAAGCTGTAGTTAAATCATTGGTCATGTTGCGGTCTCCGGAGACTAAATAATGTGTTTTCTCAATATTTCACTGCTGCGTGTCGTTTTGGCACATAGCCCGGAAAAAACAAATGGTAGGGAAACAT]
[-] EMBL CD130279 [ TCGAATGCATAACTAATGGCTTCATCTTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTGTTCCTTGATATCCAAAGCTTCTAAAACAACTCCATACAAACACGTCCCAAACCAATGTACTGGTGGAAATGTGTAATGACTGAGTAGTGGACCCAAATATTCTCTGGAATCAAACGATTGCGTCTTATCCTTAAGTTTAACCTGATCGTTTAAATCTTTGAAAACACCATCAAACGTGAAGCACCTTGCGATTTCCTCACTGAAAGCTGTA ]
[-] EMBL CD130311 [ TTCAGGTATATCTAGGTCGTAACATTCAACTGGTTGTTCCTGTTCCTTGATATCCAAAGCTTCTAAAACAACTCCATACAAACACGTCCCAAACCAATGTACTGGTGGAAATGTGTAATGACTGAGTAGTGGACCCAAATATTCTCTGGAATCAAACGATTGCGTCTTATCCTTAAGTTTAACCTGATCGTTTAAATCTTTGAAAACACCATCAAACGTGAAGCACCTTGCGATTTCCTCACTGAAAGCTGTAGTTAAATCATTGGTCATGTTGCGGTCTCCGGAGACTAAATAATGTGTTTTCTCAATATTTCACTGCTGCGTGTCGTTTAGTCAGAACTCCCG ACAATCGAATntccgc ]
[+] EMBL CD068177 [ GGTATATCTAGGTCGTAACATTGAACTGGTTGTTCCTGTTCCTTGATATCCAAAGCTTCTAAAACAACTCCATACAAACACGTCCCAAACCAATGTACTGGTGGAAATGTGTAATGACTGAGTAGTGGACCCAAATATTCTCTGGAATCAAACGATTGCGTCTTATCCTTAAGTTTAACCTGATCGTTTAAATCTTTGAAAACACCATCAAACGTGAAGCACCTTGCGATTTCCTCACTGAAAGCTGTAGTTAAATCATTGGTCATGTTGCGGTCTCCGGAGACT ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||